BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044036
(875 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553699|ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis]
gi|223542872|gb|EEF44408.1| conserved hypothetical protein [Ricinus communis]
Length = 870
Score = 1295 bits (3350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/904 (70%), Positives = 737/904 (81%), Gaps = 66/904 (7%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSND---TLIIPRRPPKSSLAQQLQRLGET 58
++ ++ KE+LKPC + S+S +++ESS + T++IPR+PPKS+L+QQLQRLG+
Sbjct: 3 IATFKALKETLKPCKST----SKSPFLTEESSQEPEPTIVIPRKPPKSNLSQQLQRLGDF 58
Query: 59 YNFSLPQQN-------------PETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQF 105
Y SLP Q P++ + + VEK+ +E++KE+E E F R +LGQF
Sbjct: 59 Y-LSLPHQQSQSQISLTPQTQKPQSLKLQIQVEKNG----KEEDKEREFEDFERPKLGQF 113
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMG 165
QFDHTGPFEPL+LS GE PI+QVPASINCRLLEHQREGVKFLYKLY+N HGG+LGDDMG
Sbjct: 114 QFDHTGPFEPLLLSLPGEVPIVQVPASINCRLLEHQREGVKFLYKLYRNNHGGVLGDDMG 173
Query: 166 LGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF 224
LGKTIQTIAFLAAV+GKD ES+DST+L+DN+V K+G VLI+CP+SVIQNWEIE SRW+TF
Sbjct: 174 LGKTIQTIAFLAAVYGKDGESTDSTMLRDNQVRKQGPVLIVCPTSVIQNWEIELSRWATF 233
Query: 225 NVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKS 284
NVS+YHG NRD+I EKL+A GVE+LITSFD+YRIHG+ILSE WEIVIVDEAHRLKNEKS
Sbjct: 234 NVSLYHGANRDLIREKLDAGGVEILITSFDTYRIHGNILSEFKWEIVIVDEAHRLKNEKS 293
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
KLY ACLE+KT+ RIGLTGTIMQNKIMEL+NLFDWVAPGSLGTREHFREFYDEPLKHGQR
Sbjct: 294 KLYEACLEIKTQKRIGLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQR 353
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
TAPERF+R+ADERK HLVAVL KY+LRRTKEETIGHLM+GKEDNVVFC MS+LQKR Y+
Sbjct: 354 ATAPERFVRVADERKGHLVAVLGKYMLRRTKEETIGHLMLGKEDNVVFCAMSELQKRVYK 413
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVL 452
R+LQ+P+IQCLINKDLPCSCGSPL QVECCKR+ DN +GCDSCPFCLVL
Sbjct: 414 RMLQIPDIQCLINKDLPCSCGSPLRQVECCKRIVPDGIIWPYLHRDNPEGCDSCPFCLVL 473
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
PCLVKLQQISNHLELIKPNPRDEPDKQRKDAE ASAVFGPDIDLVGGNAQ ESF+GLSDV
Sbjct: 474 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAEFASAVFGPDIDLVGGNAQTESFMGLSDV 533
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
K CGKMRALEKLM SWAS+GDK+LLFSYSVRMLDILEKF+IRKGYSFSRLDGSTP+NLRQ
Sbjct: 534 KHCGKMRALEKLMCSWASRGDKLLLFSYSVRMLDILEKFVIRKGYSFSRLDGSTPTNLRQ 593
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
S+VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA DLQAQDRSFRFGQKR
Sbjct: 594 SMVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAYDLQAQDRSFRFGQKR 653
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNL 692
HV+VFRLL+AGS EELVY+RQVYKQQLSNIAVSGK+EKRYFEGVQD K FQGELFGI NL
Sbjct: 654 HVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDSKHFQGELFGIANL 713
Query: 693 FRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKS 752
FRDLSD LFTSEIIE HE+QG+ T Q + ++ + K + +G +T +
Sbjct: 714 FRDLSDKLFTSEIIELHEKQGKDDGHSSVTKQALAEIGSYFLPQKQVGAAILSGRETNRL 773
Query: 753 SDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRNL 812
D + A KP+LED GI+YAHRN+DI+N PG ++K SIPQ++
Sbjct: 774 RDDDCAAAHKPVLEDSGILYAHRNEDIINLGPGMRKKNAVSIPQNV-------------- 819
Query: 813 LDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRK-K 871
KDRK +YS LA+FMGMD +FSKWILSA+P RE +LQ ++KRK K
Sbjct: 820 -------------KDRKKTQYSRLAQFMGMDEIDFSKWILSASPLERENVLQKFKKRKNK 866
Query: 872 IPKG 875
+P G
Sbjct: 867 LPDG 870
>gi|302143309|emb|CBI21870.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 1270 bits (3286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/887 (72%), Positives = 726/887 (81%), Gaps = 31/887 (3%)
Query: 5 LRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLP 64
L + KE+L+ C+N S+ S + S S I PR+PPKSSL++QLQRL + FSLP
Sbjct: 3 LNTLKETLRQCTNPSSSTLISYTNSSISREIDPINPRKPPKSSLSKQLQRLQDP--FSLP 60
Query: 65 QQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEY 124
Q P +++++ D EE+E+ + QE F + QLG QFD TGPF PLVLS D E
Sbjct: 61 QIQPRNQQKQS-------LDHEEEEEVEAQEGFEKPQLGFLQFDLTGPFVPLVLSSDDEV 113
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD- 183
P+IQVPASIN RLLEHQREGVKFLY LYK+ HGG+LGDDMGLGKTIQTIAFLAA+FGKD
Sbjct: 114 PVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDG 173
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
E DSTILK N++ KKG VLI+CP+SVI NWE EFS+W+TF+VS+YHG NRD+IL+KLEA
Sbjct: 174 ECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFSVSVYHGANRDLILDKLEA 233
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
GVE+LITSFD+YRIHGSILSEV WEIV++DEAHRLKNEKSKLY ACLE+KT RIGLTG
Sbjct: 234 HGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRIGLTG 293
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
TIMQNKIMEL+NLFDWVAPG LGTREHFREFYDEPLKHGQR TAPERF+R+ADERKQHLV
Sbjct: 294 TIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERKQHLV 353
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
AVL KYLLRRTKEETIGHLMMGKEDNVVFC MS+LQKR Y R+LQLP+IQCLINKDLPCS
Sbjct: 354 AVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLINKDLPCS 413
Query: 424 CGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
CGSPLTQVECCKR DN DGCDSCPFCLVLPCLVKL QISNHLELIKPN
Sbjct: 414 CGSPLTQVECCKRTVPNGVIWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPN 473
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
PRD+PDKQRKDAE ASAVFG DIDLVGGN Q+ESF+GLSDVK CGKMRALEKLM SW S
Sbjct: 474 PRDDPDKQRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSH 533
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
GDKILLFSYSVRMLDILEKFLIRKGY FSRLDGSTP+NLRQSLVDDFNSSPSKQVFLIST
Sbjct: 534 GDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLIST 593
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+VFRLL+AGSLEELVY+
Sbjct: 594 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYS 653
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEE 711
RQVYKQQLSNIA+SGK+EKRYFEGVQDCKEFQGELFGICNLFRDLSD LFTSEIIE HE
Sbjct: 654 RQVYKQQLSNIAISGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHEN 713
Query: 712 QGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIV 771
Q Q + T L ++ V SK++ +S+ ++RK P+ + S LED+GIV
Sbjct: 714 QRQDHGHNRSTKMDLSELGSYFVQSKEAIETVSSAPESRK---PKYFK-SDTTLEDLGIV 769
Query: 772 YAHRNDDIVNKQPGFQRKKEESIPQDLSSRPP--PIHSKRRNLLDCADGKESLASSKDRK 829
YAHRN+DIVN P Q K+E S+ Q R P+ KRR + KE+ +S+KD K
Sbjct: 770 YAHRNEDIVNFGPTIQGKEEASVAQHDGQRQSHIPVAEKRRP--NGVSRKENASSAKDWK 827
Query: 830 NIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKR-KKIPKG 875
E+SLLA+FMGM EFSKW+L+A PS REK+LQDY+KR KKIP G
Sbjct: 828 KREFSLLAQFMGMKEVEFSKWLLAAAPSEREKVLQDYKKRKKKIPNG 874
>gi|147857221|emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
Length = 874
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/887 (72%), Positives = 724/887 (81%), Gaps = 31/887 (3%)
Query: 5 LRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLP 64
L + KE+L+ C+N S+ S + S S I PR+PPKSSL++QLQRL + FSLP
Sbjct: 3 LNTLKETLRQCTNPSSSTLISYTNSSISREIDPINPRKPPKSSLSKQLQRLQDP--FSLP 60
Query: 65 QQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEY 124
Q P +++++ D EE+E+ + QE F + QLG QFD TGPF PLVLS D E
Sbjct: 61 QIQPRNQQKQS-------LDHEEEEEVEAQEGFEKPQLGFLQFDLTGPFVPLVLSSDDEV 113
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD- 183
P+IQVPASIN RLLEHQREGVKFLY LYK+ HGG+LGDDMGLGKTIQTIAFLAA+FGKD
Sbjct: 114 PVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDG 173
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
E DSTILK N++ KKG VLI+CP+SVI NWE EFS+W+TF+VS+YHG NRD+IL+KLEA
Sbjct: 174 ECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFSVSVYHGANRDLILDKLEA 233
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
GVE+LITSFD+YRIHGSILSEV WEIV++DEAHRLKNEKSKLY ACLE+KT RIGLTG
Sbjct: 234 HGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRIGLTG 293
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
TIMQNKIMEL+NLFDWVAPG LGTREHFREFYDEPLKHGQR TAPERF+R+ADERK HLV
Sbjct: 294 TIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERKXHLV 353
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
AVL YLLRRTKEETIGHLMMGKEDNVVFC MS+LQKR Y R+LQLP+IQCLINKDLPCS
Sbjct: 354 AVLHXYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLINKDLPCS 413
Query: 424 CGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
CGSPLTQVECCKR DN DGCDSCPFCLVLPCLVKL QISNHLELIKPN
Sbjct: 414 CGSPLTQVECCKRTVPNGIIWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPN 473
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
PRD+PDKQRKDAE ASAVFG DIDLVGGN Q+ESF+GLSDVK CGKMRALEKLM SW S
Sbjct: 474 PRDDPDKQRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSH 533
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
GDKILLFSYSVRMLDILEKFLIRKGY FSRLDGSTP+NLRQSLVDDFNSSPSKQVFLIST
Sbjct: 534 GDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLIST 593
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+VFRLL+AGSLEELVY+
Sbjct: 594 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYS 653
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEE 711
RQVYKQQLSNIA+SGK+EKRYFEGVQDCKEFQGELFGICNLFRDLSD LFTSEIIE HE
Sbjct: 654 RQVYKQQLSNIAISGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHEN 713
Query: 712 QGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIV 771
Q Q + T L ++ V SK++ +S+ ++RK P+ + S LED+GIV
Sbjct: 714 QRQDHGHNRSTKMDLSELGSYFVQSKEAIETVSSAPESRK---PKYFK-SDTTLEDLGIV 769
Query: 772 YAHRNDDIVNKQPGFQRKKEESIPQDLSSRPP--PIHSKRRNLLDCADGKESLASSKDRK 829
YAHRN+DIVN P Q K+E S+ Q R P+ KRR + KE+ +S+KD K
Sbjct: 770 YAHRNEDIVNFGPTIQGKEEASVAQHDGQRQSHIPVAEKRRP--NGVSRKENASSAKDWK 827
Query: 830 NIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKR-KKIPKG 875
E+SLLA+FMGM EFSKW+L+A PS REK+LQDY+KR KKIP G
Sbjct: 828 KREFSLLAQFMGMKEVEFSKWLLAAAPSEREKVLQDYKKRKKKIPNG 874
>gi|359485391|ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Vitis vinifera]
Length = 851
Score = 1241 bits (3211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/887 (71%), Positives = 709/887 (79%), Gaps = 54/887 (6%)
Query: 5 LRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLP 64
L + KE+L+ C+N S+ S + S S I PR+PPKSSL++QLQRL + FSLP
Sbjct: 3 LNTLKETLRQCTNPSSSTLISYTNSSISREIDPINPRKPPKSSLSKQLQRLQDP--FSLP 60
Query: 65 QQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEY 124
Q P +++++ D EE+E+ + QE F + QLG QFD TGPF PLVLS D E
Sbjct: 61 QIQPRNQQKQS-------LDHEEEEEVEAQEGFEKPQLGFLQFDLTGPFVPLVLSSDDEV 113
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD- 183
P+IQVPASIN RLLEHQREGVKFLY LYK+ HGG+LGDDMGLGKTIQTIAFLAA+FGKD
Sbjct: 114 PVIQVPASINHRLLEHQREGVKFLYNLYKHNHGGVLGDDMGLGKTIQTIAFLAAMFGKDG 173
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
E DSTILK N++ KKG VLI+CP+SVI NWE EFS+W+TF+VS+YHG NRD+IL+KLEA
Sbjct: 174 ECGDSTILKGNQMGKKGPVLIVCPTSVIHNWESEFSKWATFSVSVYHGANRDLILDKLEA 233
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
GVE+LITSFD+YRIHGSILSEV WEIV++DEAHRLKNEKSKLY ACLE+KT RIGLTG
Sbjct: 234 HGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACLEIKTCKRIGLTG 293
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
TIMQNKIMEL+NLFDWVAPG LGTREHFREFYDEPLKHGQR TAPERF+R+ADERKQHLV
Sbjct: 294 TIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERFVRVADERKQHLV 353
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
AVL KYLLRRTKEETIGHLMMGKEDNVVFC MS+LQKR Y R+LQLP+IQCLINKDLPCS
Sbjct: 354 AVLHKYLLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYTRMLQLPDIQCLINKDLPCS 413
Query: 424 CGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
CGSPLTQVECCKR DN DGCDSCPFCLVLPCLVKL QISNHLELIKPN
Sbjct: 414 CGSPLTQVECCKRTVPNGVIWSYLHRDNPDGCDSCPFCLVLPCLVKLLQISNHLELIKPN 473
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
PRD+PDKQRKDAE ASAVFG DIDLVGGN Q+ESF+GLSDVK CGKMRALEKLM SW S
Sbjct: 474 PRDDPDKQRKDAEFASAVFGTDIDLVGGNTQSESFMGLSDVKHCGKMRALEKLMLSWVSH 533
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
GDKILLFSYSVRMLDILEKFLIRKGY FSRLDGSTP+NLRQSLVDDFNSSPSKQVFLIST
Sbjct: 534 GDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLIST 593
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR+GQKRHV+VFRLL+AGSLEELVY+
Sbjct: 594 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVVFRLLAAGSLEELVYS 653
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEE 711
RQVYKQQLSNIA+SGK+EKRYFEGVQDCKEFQGELFGICNLFRDLSD LFTSEIIE HE
Sbjct: 654 RQVYKQQLSNIAISGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSEIIELHEN 713
Query: 712 QGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIV 771
Q Q + T K +H + + + GIV
Sbjct: 714 QRQDHGHNRSTKMDLKLKISHTEINXNFCS---------------------------GIV 746
Query: 772 YAHRNDDIVNKQPGFQRKKEESIPQDLSSRPP--PIHSKRRNLLDCADGKESLASSKDRK 829
YAHRN+DIVN P Q K+E S+ Q R P+ KRR + KE+ +S+KD K
Sbjct: 747 YAHRNEDIVNFGPTIQGKEEASVAQHDGQRQSHIPVAEKRRP--NGVSRKENASSAKDWK 804
Query: 830 NIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKR-KKIPKG 875
E+SLLA+FMGM EFSKW+L+A PS REK+LQDY+KR KKIP G
Sbjct: 805 KREFSLLAQFMGMKEVEFSKWLLAAAPSEREKVLQDYKKRKKKIPNG 851
>gi|224133490|ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222837464|gb|EEE75843.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 843
Score = 1229 bits (3181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/899 (70%), Positives = 713/899 (79%), Gaps = 81/899 (9%)
Query: 2 MSLLRSFK---ESLKPCSNFPSNFSQSS--------SVSQESSNDTLIIPRRPPKSSLAQ 50
MSLL SFK E LKPCSN + S SS S SQE L I R+PPKSSL++
Sbjct: 1 MSLLTSFKALKEILKPCSNLSTTTSSSSSSSSLTQPSFSQEP-EPALTISRKPPKSSLSK 59
Query: 51 QLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHT 110
QLQRLGE ++ R++ ++ D GR +LGQFQF+HT
Sbjct: 60 QLQRLGEPFH-----------RQEEEEKEREFED------------LGRTKLGQFQFEHT 96
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GPFEPLVLS GE P+I+VPASINCRLLEHQREGVKFLYKLY + HGG+LGDDMGLGKTI
Sbjct: 97 GPFEPLVLSLLGEVPVIRVPASINCRLLEHQREGVKFLYKLYLDNHGGVLGDDMGLGKTI 156
Query: 171 QTIAFLAAVFGKDE-SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY 229
QTIAFLAA+F KDE S +S L+ N+V KKG VLIICP+SVI NWE EFSRW++F+VS+Y
Sbjct: 157 QTIAFLAAIFEKDEESGESITLRGNQVGKKGPVLIICPTSVIHNWESEFSRWASFSVSLY 216
Query: 230 HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
HG NRD+ILEKL+A GVE+LITSFD+YRIHGSILSEV+WE+VIVDEAHRLKNEKSKLY+A
Sbjct: 217 HGTNRDLILEKLKAGGVEILITSFDTYRIHGSILSEVDWEVVIVDEAHRLKNEKSKLYLA 276
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
CLE+KTR RIGLTGT+MQNKI+EL+NL DWVAPGSLG+REHFREFYDEPLKHGQR TAPE
Sbjct: 277 CLEIKTRKRIGLTGTVMQNKIIELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPE 336
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
F+R AD+RK+HLV+VL KY+LRRTKEETIGHLMMGKEDNVVFC+MS+LQ+R YR +LQL
Sbjct: 337 SFVRKADKRKEHLVSVLCKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQRRVYRSMLQL 396
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVK 457
P+IQCL+NKDLPCSCGSPL QVECCKR+ DN +GCDSCP+CLVLPCLVK
Sbjct: 397 PDIQCLVNKDLPCSCGSPLKQVECCKRIVPDGIIWPYLHRDNPEGCDSCPYCLVLPCLVK 456
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
LQQISNHLELIKPNPRDEPDKQ+KDAE ASAVFG D+DLVGGNAQ+E+F+GLSDVK CGK
Sbjct: 457 LQQISNHLELIKPNPRDEPDKQKKDAEFASAVFGADVDLVGGNAQSENFMGLSDVKHCGK 516
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
M+ALEKLM+SWAS+GDKILLFSYSVRMLDILEKFLIRKG+SFSRLDGSTP+NLRQSLVDD
Sbjct: 517 MQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTPTNLRQSLVDD 576
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV+VF
Sbjct: 577 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVF 636
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLS 697
RLL+AGS EELVY+RQVYKQQLSNIAVSGK+E RYFEGVQDCKEFQGELFGICNLFRDLS
Sbjct: 637 RLLAAGSFEELVYSRQVYKQQLSNIAVSGKIENRYFEGVQDCKEFQGELFGICNLFRDLS 696
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEM 757
D LFTSEIIE HE+QG+ + T Q L H+
Sbjct: 697 DKLFTSEIIELHEKQGKGDGQCSTTMQ---ELNVHV------------------------ 729
Query: 758 ARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRNLLDCAD 817
+ E GI+Y HRN+DIVN PG ++ EESIP S PP+ KRR D
Sbjct: 730 ---HMHVRERDGILYTHRNEDIVNIGPGIRKNTEESIPGKDSINNPPV--KRRRKPDDVG 784
Query: 818 GKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRK-KIPKG 875
GK + SKD K I+YSLLA+FMGM EFSKW+LSAT S RE L+DY+KRK K+P G
Sbjct: 785 GKRNDLPSKDWKKIQYSLLAQFMGMGEVEFSKWVLSATTSERENALRDYKKRKEKMPDG 843
>gi|356544980|ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Glycine max]
Length = 870
Score = 1212 bits (3137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/891 (69%), Positives = 706/891 (79%), Gaps = 43/891 (4%)
Query: 5 LRSFKESLKPCSNFP----SNFSQSSSVSQESSNDTLI-IPRRPPKSSLAQQLQRLGETY 59
LR+ KESL+PCS S+ +Q+ S +D+L I R+PPKSSL+ QL+RL +
Sbjct: 3 LRALKESLRPCSTLKPSSSSSITQTQPYSILRESDSLFPIHRKPPKSSLSHQLRRLDD-- 60
Query: 60 NFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLS 119
SL Q + +T +++ ++ + E K KF +L QFQFDHTGPFEPL+LS
Sbjct: 61 --SLTQTHSKTLQQQQQQQEEKEEEPEIK-----ITKFASPKLPQFQFDHTGPFEPLLLS 113
Query: 120 KDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
GE+P +QVPASINCRLLEHQREGV+FLY LYKN HGGILGDDMGLGKTIQ IAFLAAV
Sbjct: 114 SHGEFPPVQVPASINCRLLEHQREGVRFLYGLYKNNHGGILGDDMGLGKTIQAIAFLAAV 173
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILE 239
F K+ S L +N V+K+ LIICP+SVI NWE EFS+WS F+VSIYHG NR++I +
Sbjct: 174 FAKEGHS---TLNENHVEKRDPALIICPTSVIHNWESEFSKWSNFSVSIYHGANRNLIYD 230
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
KLEA VE+LITSFD+YRIHGS L ++NW IVI+DEAHRLKNEKSKLY ACLE+KT R
Sbjct: 231 KLEANEVEILITSFDTYRIHGSSLLDINWNIVIIDEAHRLKNEKSKLYKACLEIKTLRRY 290
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
GLTGT MQNKIMEL+NLFDWVAPGSLGTREHFREFYDEPLKHGQR TAP+RF++IA++RK
Sbjct: 291 GLTGTAMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRK 350
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
QHLVAVL KYLLRRTKEETIGHLMMGKEDN+VFC MSD+QKR YRR+LQLP+IQCLINK+
Sbjct: 351 QHLVAVLHKYLLRRTKEETIGHLMMGKEDNIVFCAMSDVQKRVYRRMLQLPDIQCLINKN 410
Query: 420 LPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
LPCSCGSPLTQVECCKR+ DN DGCDSCPFCLVLPCLVKLQQISNHLEL
Sbjct: 411 LPCSCGSPLTQVECCKRIVPDGAIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLEL 470
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
IKPNP+D+PDKQ KDAE A+AVFGPDIDLVGGN QNESF+GLSDV CGKMRALEKL+YS
Sbjct: 471 IKPNPKDDPDKQNKDAEFAAAVFGPDIDLVGGNTQNESFMGLSDVTHCGKMRALEKLLYS 530
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
W S+GDK+LLFSYSVRMLDILEKFLIRKGY FSRLDGSTP+NLRQSLVDDFNSSPSKQVF
Sbjct: 531 WFSQGDKVLLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVF 590
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV+VFRLL+AGSLEE
Sbjct: 591 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEE 650
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE 707
LVY+RQVYKQQLSNIAVSGK+EKRYFEGVQDCKEFQGELFGI NLFRDLSD LFT EIIE
Sbjct: 651 LVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGISNLFRDLSDKLFTGEIIE 710
Query: 708 SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLED 767
HEE G + E+ E ++ + S+++L S+TR + TSKP L D
Sbjct: 711 LHEEHGHETEQPE---------EVNLSEEETSSSVLE--SETRLCNKSVRDATSKPDLVD 759
Query: 768 MGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIH---SKRRNLLDCADGKESLAS 824
+GIVY HRN+DIVN PG Q K + SIP D S P I +R D K+ +
Sbjct: 760 LGIVYTHRNEDIVNFGPGIQGKIDTSIPLDDSLVKPSISLDLDHQRKKPDSIPKKQKVPL 819
Query: 825 SKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRKKIPKG 875
+RK +Y LLA+ +GM FSKW+LSATP REK+L D++K+KKIP G
Sbjct: 820 IDERKRTQYRLLAQSLGMGELAFSKWLLSATPLEREKVLLDFKKKKKIPNG 870
>gi|449444556|ref|XP_004140040.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Cucumis sativus]
Length = 880
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/790 (72%), Positives = 651/790 (82%), Gaps = 33/790 (4%)
Query: 99 RHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG 158
R +LGQFQFDHTGPFEPL+LS ++P++QVP SINCRLLEHQREGVKFLY LYKN HGG
Sbjct: 111 RSELGQFQFDHTGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGG 170
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
ILGDDMGLGKTIQTIAFLAAV+ KD I K+ KK +LI+ P+SVI NWE EF
Sbjct: 171 ILGDDMGLGKTIQTIAFLAAVYAKDGDG---IQKETCGKKKDPILIVSPTSVIHNWENEF 227
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
S+W+ F+V++YHG NRD+I +KLEA +EVLITSFD+YRIHG ILSEV WEI+I+DEAHR
Sbjct: 228 SKWANFSVAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHR 287
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKNEKSKLY AC +KT R GLTGTIMQNKIMEL+NLFD VAPGSLGTREHFREF+DEP
Sbjct: 288 LKNEKSKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEP 347
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
LKHGQR TAPERFIRIADERKQHL AVL KY+LRRTK+ETIGHLM+GKEDNVVFC MS+L
Sbjct: 348 LKHGQRSTAPERFIRIADERKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSEL 407
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSC 446
QKR YRR+LQLP+IQCLINKDLPC CGSPLTQ ECCKR DN +GCDSC
Sbjct: 408 QKRVYRRMLQLPDIQCLINKDLPCGCGSPLTQAECCKRTVQNGIIWPYLHRDNPEGCDSC 467
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
PFC+VLPCLVKLQQISNHLELIKPNP+D+ +KQR+DAE ASAV+G DIDLVGG+AQNESF
Sbjct: 468 PFCIVLPCLVKLQQISNHLELIKPNPKDDSEKQRRDAEFASAVYGSDIDLVGGSAQNESF 527
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
+ LSDV+ CGKMRAL+KL SW S+GDKILLFSYSVRMLDILEKF++RKGYSFSRLDGST
Sbjct: 528 MALSDVRHCGKMRALDKLFSSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGST 587
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
P+N+RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF
Sbjct: 588 PTNMRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 647
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGEL 686
RFGQKRHV+VFRLL+AGSLEELVY+RQVYKQQLSNIAVSGK+EKRYFEGVQDCKEFQGEL
Sbjct: 648 RFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGEL 707
Query: 687 FGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTG 746
FGICNLF DLSD LFTSEIIE HEE+ E T+Q + + S D + ++S+
Sbjct: 708 FGICNLFSDLSDKLFTSEIIEMHEEKETNDELASNTDQNTSNAGSSVPS--DKSNVVSSA 765
Query: 747 SKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIH 806
T T+KP+LED+GIVYAHRN+D+VN PG Q K + QD + + P +
Sbjct: 766 VNT---------NTNKPMLEDLGIVYAHRNEDVVNSGPGTQAKMALPVAQDCTPKQPHVP 816
Query: 807 SKRRNLLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDY 866
++ LD L+SS DRK I+Y +LA F+GM EFSKW+LSATP R+K+L+DY
Sbjct: 817 EIKKRKLD------DLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKVLKDY 870
Query: 867 RKRK-KIPKG 875
R+RK KIP G
Sbjct: 871 RRRKEKIPNG 880
>gi|449475946|ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Cucumis sativus]
Length = 840
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/790 (72%), Positives = 651/790 (82%), Gaps = 33/790 (4%)
Query: 99 RHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG 158
R +LGQFQFDHTGPFEPL+LS ++P++QVP SINCRLLEHQREGVKFLY LYKN HGG
Sbjct: 71 RSELGQFQFDHTGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGG 130
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
ILGDDMGLGKTIQTIAFLAAV+ KD I K+ KK +LI+ P+SVI NWE EF
Sbjct: 131 ILGDDMGLGKTIQTIAFLAAVYAKDGDG---IQKETCGKKKDPILIVSPTSVIHNWENEF 187
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
S+W+ F+V++YHG NRD+I +KLEA +EVLITSFD+YRIHG ILSEV WEI+I+DEAHR
Sbjct: 188 SKWANFSVAVYHGTNRDLIYDKLEAGAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHR 247
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKNEKSKLY AC +KT R GLTGTIMQNKIMEL+NLFD VAPGSLGTREHFREF+DEP
Sbjct: 248 LKNEKSKLYSACAGIKTLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEP 307
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
LKHGQR TAPERFIRIADERKQHL AVL KY+LRRTK+ETIGHLM+GKEDNVVFC MS+L
Sbjct: 308 LKHGQRSTAPERFIRIADERKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSEL 367
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSC 446
QKR YRR+LQLP+IQCLINKDLPC CGSPLTQ ECCKR DN +GCDSC
Sbjct: 368 QKRVYRRMLQLPDIQCLINKDLPCGCGSPLTQAECCKRTVRNGIIWPYLHRDNPEGCDSC 427
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
PFC+VLPCLVKLQQISNHLELIKPNP+D+P+KQR+DAE ASAV+G DIDLVGG+AQNESF
Sbjct: 428 PFCIVLPCLVKLQQISNHLELIKPNPKDDPEKQRRDAEFASAVYGSDIDLVGGSAQNESF 487
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
+ LSDV+ CGKMRAL+KL SW S+GDKILLFSYSVRMLDILEKF++RKGYSFSRLDGST
Sbjct: 488 MALSDVRHCGKMRALDKLFSSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGST 547
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
P+N+RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF
Sbjct: 548 PTNMRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 607
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGEL 686
RFGQKRHV+VFRLL+AGSLEELVY+RQVYKQQLSNIAVSGK+EKRYFEGVQDCKEFQGEL
Sbjct: 608 RFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGEL 667
Query: 687 FGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTG 746
FGICNLF DLSD LFTSEIIE HEE+ Q + L+ + S D + ++S+
Sbjct: 668 FGICNLFSDLSDKLFTSEIIEMHEEKEQMTSLPQTQTRIPPTLDLXVPS--DKSNVVSSA 725
Query: 747 SKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIH 806
T T+KP+LED+GIVYAHRN+D+VN PG Q K + QD + + P +
Sbjct: 726 VNT---------NTNKPMLEDLGIVYAHRNEDVVNSGPGTQAKMALPVAQDCTPKQPHVP 776
Query: 807 SKRRNLLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDY 866
++ LD L+SS DRK I+Y +LA F+GM EFSKW+LSATP R+K+L+DY
Sbjct: 777 EIKKRKLD------DLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKVLKDY 830
Query: 867 RKRK-KIPKG 875
R+RK KIP G
Sbjct: 831 RRRKEKIPNG 840
>gi|42561667|ref|NP_171871.2| switch 2 [Arabidopsis thaliana]
gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis thaliana]
Length = 862
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/895 (65%), Positives = 704/895 (78%), Gaps = 58/895 (6%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSLL +FKE+LKPC +FPS+ S S +QE L R+PPKSSL+QQL RL ++Y
Sbjct: 1 MSLLHTFKETLKPCGSFPSSSSLRVSSTQE-----LEPSRKPPKSSLSQQLLRLDDSY-- 53
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEK-----------EQEQEKFGRHQLGQFQFDHT 110
LP ++ E++ K VE + +D+ K ++ +FGR L + +FD++
Sbjct: 54 FLPSKH-ESKISKTQVEDFDHNEDDHKRNIKFDEEEVDEDDERSIEFGRPGLSRAEFDYS 112
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GP+EPL+LS GE PII VPASINCRLLEHQREGVKF+Y LYKN HGGILGDDMGLGKTI
Sbjct: 113 GPYEPLMLSSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTI 172
Query: 171 QTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSI 228
QTIAFLAAV+GKD ++ +S +L+ +K G VLIICPSS+I NWE EFSRW++F VS+
Sbjct: 173 QTIAFLAAVYGKDGDAGESCLLESDK----GPVLIICPSSIIHNWESEFSRWASFFKVSV 228
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
YHG NRDMILEKL+A GVEVL+TSFD++RI G +LS +NWEIVI DEAHRLKNEKSKLY
Sbjct: 229 YHGSNRDMILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYE 288
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
ACLE+KT+ RIGLTGT+MQNKI EL+NLF+WVAPGSLGTREHFR+FYDEPLK GQR TAP
Sbjct: 289 ACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAP 348
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
ERF++IAD+RKQHL ++LRKY+LRRTKEETIGHLMMGKEDNVVFC MS LQ+R Y+R++Q
Sbjct: 349 ERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 408
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLV 456
LPEIQCL+NKD PC+CGSPL Q ECC+R+ DN DGCDSCPFCLVLPCL+
Sbjct: 409 LPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLM 468
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
KLQQISNHLELIKPNP+DEP+KQ+KDAE S VFG DIDL+GG + ++SF+ LSDVK CG
Sbjct: 469 KLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCG 528
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
KMRALEKLM SW SKGDKILLFSYSVRMLDILEKFLIRKGYSF+RLDGSTP+NLRQSLVD
Sbjct: 529 KMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVD 588
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
DFN+SPSKQVFLIST+AGGLGLNLVSANRVVIFDPNWNP+ DLQAQDRSFR+GQKRHV+V
Sbjct: 589 DFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVV 648
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
FRLLSAGSLEELVYTRQVYKQQLSNIAV+GK+E RYFEGVQDCKEFQGELFGI NLFRDL
Sbjct: 649 FRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQGELFGISNLFRDL 708
Query: 697 SDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPE 756
SD LFTS+I+E H + + N+ LET + + ++ S PE
Sbjct: 709 SDKLFTSDIVELHRDSNIDE------NKKRSLLETGVSEDEKEEEVMC-------SYKPE 755
Query: 757 MARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRNLLDCA 816
M KP+L+D+GIVYAHRN+DI+N + S Q L+ K++ C+
Sbjct: 756 M---EKPILKDLGIVYAHRNEDIINIG-----ETTTSTSQRLNGDGNSADRKKKKRKGCS 807
Query: 817 DGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
+ ++ +S++++K +Y +LA F GM++ EFS+W+LSA+P REKLLQD+ +R K
Sbjct: 808 EEEDMSSSNREQKREKYKMLAEFKGMEILEFSRWVLSASPFDREKLLQDFLERVK 862
>gi|4204312|gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana]
Length = 874
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/907 (64%), Positives = 704/907 (77%), Gaps = 70/907 (7%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSLL +FKE+LKPC +FPS+ S S +QE L R+PPKSSL+QQL RL ++Y
Sbjct: 1 MSLLHTFKETLKPCGSFPSSSSLRVSSTQE-----LEPSRKPPKSSLSQQLLRLDDSY-- 53
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEK-----------EQEQEKFGRHQLGQFQFDHT 110
LP ++ E++ K VE + +D+ K ++ +FGR L + +FD++
Sbjct: 54 FLPSKH-ESKISKTQVEDFDHNEDDHKRNIKFDEEEVDEDDERSIEFGRPGLSRAEFDYS 112
Query: 111 GPFEPLVLSKDGEYPIIQV------------PASINCRLLEHQREGVKFLYKLYKNKHGG 158
GP+EPL+LS GE PII V PASINCRLLEHQREGVKF+Y LYKN HGG
Sbjct: 113 GPYEPLMLSSIGEIPIIHVIFLPKSLTFAHVPASINCRLLEHQREGVKFMYNLYKNNHGG 172
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIE 217
ILGDDMGLGKTIQTIAFLAAV+GKD ++ +S +L+ +K G VLIICPSS+I NWE E
Sbjct: 173 ILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK----GPVLIICPSSIIHNWESE 228
Query: 218 FSRWSTF-NVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
FSRW++F VS+YHG NRDMILEKL+A GVEVL+TSFD++RI G +LS +NWEIVI DEA
Sbjct: 229 FSRWASFFKVSVYHGSNRDMILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEA 288
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKNEKSKLY ACLE+KT+ RIGLTGT+MQNKI EL+NLF+WVAPGSLGTREHFR+FYD
Sbjct: 289 HRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYD 348
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
EPLK GQR TAPERF++IAD+RKQHL ++LRKY+LRRTKEETIGHLMMGKEDNVVFC MS
Sbjct: 349 EPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMS 408
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCD 444
LQ+R Y+R++QLPEIQCL+NKD PC+CGSPL Q ECC+R+ DN DGCD
Sbjct: 409 QLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCD 468
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
SCPFCLVLPCL+KLQQISNHLELIKPNP+DEP+KQ+KDAE S VFG DIDL+GG + ++
Sbjct: 469 SCPFCLVLPCLMKLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASK 528
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
SF+ LSDVK CGKMRALEKLM SW SKGDKILLFSYSVRMLDILEKFLIRKGYSF+RLDG
Sbjct: 529 SFMDLSDVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDG 588
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
STP+NLRQSLVDDFN+SPSKQVFLIST+AGGLGLNLVSANRVVIFDPNWNP+ DLQAQDR
Sbjct: 589 STPTNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDR 648
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
SFR+GQKRHV+VFRLLSAGSLEELVYTRQVYKQQLSNIAV+GK+E RYFEGVQDCKEFQG
Sbjct: 649 SFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQG 708
Query: 685 ELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLS 744
ELFGI NLFRDLSD LFTS+I+E H + + N+ LET + + ++
Sbjct: 709 ELFGISNLFRDLSDKLFTSDIVELHRDSNIDE------NKKRSLLETGVSEDEKEEEVMC 762
Query: 745 TGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPP 804
S PEM KP+L+D+GIVYAHRN+DI+N + S Q L+
Sbjct: 763 -------SYKPEM---EKPILKDLGIVYAHRNEDIINIG-----ETTTSTSQRLNGDGNS 807
Query: 805 IHSKRRNLLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQ 864
K++ C++ ++ +S++++K +Y +LA F GM++ EFS+W+LSA+P REKLLQ
Sbjct: 808 ADRKKKKRKGCSEEEDMSSSNREQKREKYKMLAEFKGMEILEFSRWVLSASPFDREKLLQ 867
Query: 865 DYRKRKK 871
D+ +R K
Sbjct: 868 DFLERVK 874
>gi|297843184|ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335315|gb|EFH65732.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 876
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/897 (64%), Positives = 697/897 (77%), Gaps = 54/897 (6%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSLL +FKE+LKPC NFPS+ S S +QE R+PPKSSL+QQL RL ++Y
Sbjct: 1 MSLLHTFKETLKPCGNFPSSSSLRVSSTQEFEPS-----RKPPKSSLSQQLLRLDDSY-- 53
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEK------------EQEQEKFGRHQLGQFQFDH 109
LP ++ E++ K VE +D+ K +++ +FGR L + +FD+
Sbjct: 54 FLPSKH-ESKISKTQVEDFEFNEDDHKRNIKFDEEEEDDEDDEKSIEFGRPGLSRAEFDY 112
Query: 110 TGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKT 169
+GP+EPL+LS GE PIIQVPASINCRLLEHQREGVKF+Y LYKN HGGILGDDMGLGKT
Sbjct: 113 SGPYEPLLLSSMGEIPIIQVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKT 172
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSI 228
IQTIAFLA V+GKD + T L ++ KG VLIICPSS+I NWE EFSRW++F VS+
Sbjct: 173 IQTIAFLAGVYGKDGDAGETSLLESD---KGPVLIICPSSIIHNWESEFSRWASFFKVSV 229
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
YHG NRDMILEKL+A GVEVL+TSFD++RI G +LS +NWEIVI DEAHRLKNEKSKLY
Sbjct: 230 YHGSNRDMILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYE 289
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
ACLE+KT+ RIGLTGT+MQNKI EL+NLF+WVAPGSLGTR+HFREFYDEPLK GQR TAP
Sbjct: 290 ACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTRDHFREFYDEPLKLGQRATAP 349
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
ERF++IAD+RKQHL ++LRKY+LRRTKEETIGHLMMGKEDNVVFC MS LQ+R Y+R+LQ
Sbjct: 350 ERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMLQ 409
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLV 456
LPEIQCL+ KD PC+CGSPL Q ECC+R+ DN DGCDSCPFCLVLPCL+
Sbjct: 410 LPEIQCLVKKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNPDGCDSCPFCLVLPCLL 469
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
KLQQISNHLELIKPNP+DEP+KQ+KDA+ SAVFG DIDLVGG + ++SF+ LSDVK CG
Sbjct: 470 KLQQISNHLELIKPNPKDEPEKQKKDADFVSAVFGTDIDLVGGISASKSFMDLSDVKHCG 529
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
KMRALEKLM SW SKGDKILLFSYSVRMLDILEKFLIRKGYSF+RLDGSTP+NLRQSLVD
Sbjct: 530 KMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVD 589
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
DFN+SPSKQVFLIST+AGGLGLNLVSANRVVIFDPNWNP+ DLQAQDRSFR+GQKRHV+V
Sbjct: 590 DFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVV 649
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
FRLLSAGSLEELVYTRQVYKQQLSNIAV+GK+E RYFEGVQDCK+FQGELFGI NLFRDL
Sbjct: 650 FRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKQFQGELFGISNLFRDL 709
Query: 697 SDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPE 756
SD LFTS+I+E H + + + LET + + ++ S PE
Sbjct: 710 SDKLFTSDIVELHRDSNIDENKRSL-------LETGVSEDEKEEEVVC-------SYKPE 755
Query: 757 MARTSKPLLEDMGIVYAHRNDDIVN-KQPGFQRKKEESIPQDLSSRPPPIHSKRRNLLDC 815
+ KP+L+D+GIVYAHRN+DI+N + + + +D K++ C
Sbjct: 756 I---EKPILKDLGIVYAHRNEDIINGGETTISTSERLNGDRDSDENLECADRKKKKRKGC 812
Query: 816 ADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRKKI 872
++ ++ +S++++K +Y +LA F GM++ EFS+W+LSA+ RE LLQD+ + ++
Sbjct: 813 SEEEDMSSSNREQKREKYKMLAEFKGMEILEFSRWVLSASLFDRETLLQDFFGKSQV 869
>gi|242033923|ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
gi|241918210|gb|EER91354.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
Length = 888
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/898 (61%), Positives = 665/898 (74%), Gaps = 56/898 (6%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSL R KE+L CS S+FSQ + + + ++PRRPPK+SL+QQL RL +
Sbjct: 1 MSLNR-LKETLNACS---SSFSQPQTQPRSPPHHPALLPRRPPKTSLSQQLLRLEAAASS 56
Query: 62 SL-------PQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQ-------F 107
S P Q P R +P++K D E E E E+ R + + Q
Sbjct: 57 SSSSSFSSRPVQLPPVPR--SPIQKPREVD-EPPSSEDEDERKSRPIIRRCQPPPPPAAL 113
Query: 108 DHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLG 167
+ GPFEPLVLS GE+P++QVP SINCRLL HQR+GV+FLY LY+N HGGILGDDMGLG
Sbjct: 114 ESRGPFEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGILGDDMGLG 173
Query: 168 KTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS 227
KTIQTIAFL++V GK + + NK K G VLI+CP+SVI+NWE EFS W+ F+V+
Sbjct: 174 KTIQTIAFLSSVIGKGNGHEQST---NKGKKIGPVLILCPTSVIRNWENEFSEWAEFSVA 230
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
+YHGPNRD++L K+E G+EVLITSFD++RIH IL ++WE+V+VDEAHRLKNEKSKLY
Sbjct: 231 VYHGPNRDLVLGKIETQGLEVLITSFDTFRIHDKILCGISWELVVVDEAHRLKNEKSKLY 290
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
ACL + T+ R GLTGTIMQNKIMEL+NLFDWV PG LG REHFR +YDEPLK GQRL+A
Sbjct: 291 TACLGITTQKRFGLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQRLSA 350
Query: 348 PERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
PERF+++AD RK+HLV+VLRK+LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR YRR+L
Sbjct: 351 PERFVQVADARKKHLVSVLRKFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRML 410
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLD-GCDSCPFCLVLPC 454
Q P+IQ LIN+D+PCSCGSPL QVECCKR DN D GC CPFCLVLPC
Sbjct: 411 QQPDIQILINRDVPCSCGSPLPQVECCKRTEPAGVIWSYLHRDNPDEGCSICPFCLVLPC 470
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
LVKLQQISNHLELIKPNP+DEP+KQ+KDAELA+AVFG DIDLVGG A++E+F+GLSD +
Sbjct: 471 LVKLQQISNHLELIKPNPKDEPEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSDAEH 530
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
CGKMRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N RQSL
Sbjct: 531 CGKMRALERLLSLWTQQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSL 590
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD+FN SPSKQVFLISTRAG LG+NLVSANRVVIFDP+WNPAQDLQAQDRSFR+GQ+RHV
Sbjct: 591 VDEFNRSPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQRRHV 650
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
VFRLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+E+RYFEGVQD K+FQGELFGICNLFR
Sbjct: 651 TVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIERRYFEGVQDDKKFQGELFGICNLFR 710
Query: 695 DLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSD 754
DLSD LFTSEIIE H E G+ T I D++ GS+ + S
Sbjct: 711 DLSDKLFTSEIIEMHGEHGKSSATE----------ATGIREIVDTDLF---GSQENRKSS 757
Query: 755 PEMARTSKPLLEDMGIVYAHRNDDIVN-----KQPGFQRKKEESIPQDLSSRPPPIHSKR 809
T L D GIVYAHRN+D+VN ++ G K +S ++L S+ H+
Sbjct: 758 TTTTDTDNEKLVDFGIVYAHRNEDVVNSRTNEREKGGTDKTLQSSLEELHSKNETKHTVM 817
Query: 810 RNLLDCADGKESLAS-SKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDY 866
+ ++ S S ++K E+S +A FMGMD EFSKW+LSA+P R ++LQ+Y
Sbjct: 818 EKSYSLEEKRKVARSYSLEQKRKEFSRIASFMGMDDLEFSKWLLSASPHQRSEVLQNY 875
>gi|357121176|ref|XP_003562297.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Brachypodium distachyon]
Length = 851
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/884 (60%), Positives = 655/884 (74%), Gaps = 51/884 (5%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSL R KE+L PCS SS+ Q + PRRPPK+SL+QQL RL ++
Sbjct: 1 MSLHRP-KETLNPCS--------SSAHVQHRPRSPPLPPRRPPKTSLSQQLLRLEASFPA 51
Query: 62 SLPQQNP-ETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSK 120
P +P + +K + + V +E + + + GP+EPLVLS+
Sbjct: 52 GAPASSPPKPLSQKTAEDAAEVPTSSSEEDVPPRPQRRPPPQPASSLESRGPYEPLVLSQ 111
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
GE+P++QVP SINCRLL HQR GV+FLY LY+N HGG+LGDDMGLGKTIQTIAFL++V
Sbjct: 112 PGEHPVVQVPPSINCRLLAHQRVGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFLSSVI 171
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEK 240
GKD +D+ +K K G VLIICP+SVI+NWE EF+ W++F+V++YHGPNRD++LEK
Sbjct: 172 GKD--NDNGEKSTDKGKKTGPVLIICPTSVIRNWENEFAEWASFSVAVYHGPNRDLVLEK 229
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E+ G+EVLITSFD++R +L ++WE+V+VDEAHRLKNEKSKLY +CL + T+ R G
Sbjct: 230 IESQGLEVLITSFDTFRTRDKLLCAISWELVVVDEAHRLKNEKSKLYTSCLGIITQRRFG 289
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGTIMQNKIMEL+N+FDWV PG LG REHFR +YDEPLKHGQRL+AP+RF+++ADERK+
Sbjct: 290 LTGTIMQNKIMELFNVFDWVVPGCLGDREHFRAYYDEPLKHGQRLSAPDRFVQVADERKK 349
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
HLV+VLRK+LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR YRR+LQ PEIQ L+NKDL
Sbjct: 350 HLVSVLRKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPEIQILVNKDL 409
Query: 421 PCSCGSPLTQVECCKRLD------------NLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
PCSCGSP QVECCKR++ NL+GC CPFCLVLPCLVKLQQISNHLELI
Sbjct: 410 PCSCGSPFAQVECCKRIEPNGIIWSYLHRENLEGCALCPFCLVLPCLVKLQQISNHLELI 469
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
KPNP+DE +KQ+KDAELA+AVF DI+LVGG+A++E+F+GLSD + CGKMRALE+L+ W
Sbjct: 470 KPNPKDEVEKQKKDAELAAAVFDTDIELVGGSAKSENFMGLSDSEHCGKMRALERLLSLW 529
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL 588
A +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N RQSLVD+FN SPSKQ+FL
Sbjct: 530 ALQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDEFNKSPSKQIFL 589
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
ISTRAG LG+NLVSANRVVIFDP+WNPAQDLQAQDRSFR+GQKRHV VFRLL AGSLEEL
Sbjct: 590 ISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQKRHVTVFRLLGAGSLEEL 649
Query: 649 VYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIES 708
+Y+RQ+YKQQLSNIAVSGK+EKRYF+GVQD K+FQGELFGICNLFRDLSD LFTSEIIE
Sbjct: 650 IYSRQIYKQQLSNIAVSGKIEKRYFQGVQDDKKFQGELFGICNLFRDLSDKLFTSEIIEM 709
Query: 709 HEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMART--SKPLLE 766
H E ++G T I D++ L T K + P +A L
Sbjct: 710 HAEH----------DKGQTSESTGIREIVDTD-LFGTHEKMK----PSVAAIDDENQTLA 754
Query: 767 DMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSK 826
GIVYAHRN+D+VN R + S ++ SK D + S +
Sbjct: 755 RCGIVYAHRNEDVVNT-----RTDQNSERIGAATDECVQQSK-----DQIKHRAKSCSVE 804
Query: 827 DRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRK 870
+ K E+S +A MGM+ EFS W+LS +P R+++L +YRK+K
Sbjct: 805 EHKRKEFSRVATCMGMNDLEFSTWLLSVSPLQRQQVLDNYRKQK 848
>gi|222630854|gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group]
Length = 947
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/851 (60%), Positives = 631/851 (74%), Gaps = 40/851 (4%)
Query: 37 LIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEK 96
L + RRPPK+SL+QQL RL + + S +P +P + D +E+++
Sbjct: 120 LFLARRPPKTSLSQQLLRLDASSSSSSFSVSPPPPPRTSPTSDAAADDAPPLPEEEDEVP 179
Query: 97 FGRHQLG---QFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYK 153
R + D GP+EPL LS GE P++QVP+SINCRLL HQR+GV+FLY LY+
Sbjct: 180 CIRPRASLPPAASLDSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYR 239
Query: 154 NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQN 213
N HGG+LGDDMGLGKTIQTIAFL+AV GKD +++ K+ +LI+CP+SVI+N
Sbjct: 240 NNHGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKI---APILILCPTSVIRN 296
Query: 214 WEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
WE EF+ W+ +V++YHGPNRD++L+K+E +E++ITSFD++RIHG IL ++W++V+V
Sbjct: 297 WENEFAEWARCSVAVYHGPNRDLVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVV 356
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHRLKNEKSKLY ACLE+ TR R GLTGTIMQNKIMEL+NLFDW+ PG LG REHFR
Sbjct: 357 DEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRV 416
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+YDEPLKHGQR +APERF+++AD+RK+HLV+VL K+LLRRTKEETIGHLM+GKEDN+VFC
Sbjct: 417 YYDEPLKHGQRFSAPERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFC 476
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLD 441
MSD+QKR YRR+LQ P++Q LINKDLPCSCGSPLTQVECCKR DN +
Sbjct: 477 RMSDVQKRVYRRMLQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPE 536
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
GC CPFCLVLPCL KLQQISNHLELIKPN +DE +KQ+KDAELA+AVF DI+LVGG A
Sbjct: 537 GCSLCPFCLVLPCLGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGA 596
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
++E+F+GLSD + CGKMRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR
Sbjct: 597 KSENFMGLSDAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSR 656
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
DG+TP N RQ L+D+FN PSKQVFLISTRAG LG+NLVSANRVVIFDP+WNPAQDLQA
Sbjct: 657 FDGTTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQA 716
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKE 681
QDRSFRFGQ+RHV VFRLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+EKRYFEGVQD K+
Sbjct: 717 QDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEGVQDDKK 776
Query: 682 FQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNT 741
FQGELFGICNLFRDLSD LFTSEIIE H E G +G I D+N
Sbjct: 777 FQGELFGICNLFRDLSDKLFTSEIIEMHGEHG----------KGNTAETIGIREIVDTNI 826
Query: 742 LLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQP--GFQRKKEESIPQDLS 799
G++ + S L GIVYAHRN+D+VN + +++++P+ L
Sbjct: 827 F---GTQDQMKSSMTAIHNENKNLYHCGIVYAHRNEDVVNTRTNEASNCAEDKTVPRHLE 883
Query: 800 SRPPPIHSKRRNLLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAR 859
+ SK+ + K + S +K E+S +A FMGM+ EFSKW+LS +P R
Sbjct: 884 E----LQSKKNETMHTIKAK---SYSLVQKKKEFSRIASFMGMNDLEFSKWLLSVSPLQR 936
Query: 860 EKLLQDYRKRK 870
++L YR K
Sbjct: 937 HEVLDRYRNAK 947
>gi|115462843|ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa Japonica Group]
gi|113578572|dbj|BAF16935.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|125551533|gb|EAY97242.1| hypothetical protein OsI_19162 [Oryza sativa Indica Group]
gi|215701224|dbj|BAG92648.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 856
Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/778 (63%), Positives = 599/778 (76%), Gaps = 37/778 (4%)
Query: 107 FDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGL 166
D GP+EPL LS GE P++QVP+SINCRLL HQR+GV+FLY LY+N HGG+LGDDMGL
Sbjct: 102 LDSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGL 161
Query: 167 GKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV 226
GKTIQTIAFL+AV GKD +++ K+ +LI+CP+SVI+NWE EF+ W+ +V
Sbjct: 162 GKTIQTIAFLSAVIGKDNDHGDQLVEGRKI---APILILCPTSVIRNWENEFAEWARCSV 218
Query: 227 SIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
++YHGPNRD++L+K+E +E++ITSFD++RIHG IL ++W++V+VDEAHRLKNEKSKL
Sbjct: 219 AVYHGPNRDLVLQKVETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKL 278
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
Y ACLE+ TR R GLTGTIMQNKIMEL+NLFDW+ PG LG REHFR +YDEPLKHGQR +
Sbjct: 279 YTACLEITTRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFS 338
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
APERF+++AD+RK+HLV+VL K+LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR YRR+
Sbjct: 339 APERFVQVADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRM 398
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPC 454
LQ P++Q LINKDLPCSCGSPLTQVECCKR DN +GC CPFCLVLPC
Sbjct: 399 LQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPFCLVLPC 458
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L KLQQISNHLELIKPN +DE +KQ+KDAELA+AVF DI+LVGG A++E+F+GLSD +
Sbjct: 459 LGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIELVGGGAKSENFMGLSDAEH 518
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
CGKMRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N RQ L
Sbjct: 519 CGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLL 578
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+D+FN PSKQVFLISTRAG LG+NLVSANRVVIFDP+WNPAQDLQAQDRSFRFGQ+RHV
Sbjct: 579 IDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHV 638
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
VFRLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+EKRYFEGVQD K+FQGELFGICNLFR
Sbjct: 639 TVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFEGVQDDKKFQGELFGICNLFR 698
Query: 695 DLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSD 754
DLSD LFTSEIIE H E G +G I D+N G++ + S
Sbjct: 699 DLSDKLFTSEIIEMHGEHG----------KGNTAETIGIREIVDTNIF---GTQDQMKSS 745
Query: 755 PEMARTSKPLLEDMGIVYAHRNDDIVNKQP--GFQRKKEESIPQDLSSRPPPIHSKRRNL 812
L GIVYAHRN+D+VN + +++++P+ L + SK+
Sbjct: 746 MTAIHNENKNLYHCGIVYAHRNEDVVNTRTNEASNCAEDKTVPRHLEE----LQSKKNET 801
Query: 813 LDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRK 870
+ K + S +K E+S +A FMGM+ EFSKW+LS +P R ++L YR K
Sbjct: 802 MHTIKAK---SYSLVQKKKEFSRIASFMGMNDLEFSKWLLSVSPLQRHEVLDRYRNAK 856
>gi|413933787|gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 687
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/698 (65%), Positives = 544/698 (77%), Gaps = 35/698 (5%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSL R KE+L CS+ S Q + +PRRPPK+SL+QQL RL +
Sbjct: 1 MSLNR-LKETLHACSSSSSEPRTQPRSPQHPAR----LPRRPPKTSLSQQLLRLEAAASS 55
Query: 62 SL-----PQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGR-------HQLGQFQFDH 109
S P Q P R P+EK D E E E E+ R H +
Sbjct: 56 SSFFSSRPLQLPPAPR--PPIEKPRE-DVEPPSSEDEDERKSRPIIRRCLHPPPAAALES 112
Query: 110 TGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKT 169
GP+EPLVLS GE+P++QVP SINCRLL HQR+GV+FLY LY+N HGG+LGDDMGLGKT
Sbjct: 113 RGPYEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDDMGLGKT 172
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY 229
IQTIAFL++V GK + NK G VLI+CP+SVI+NWE EFS W+ F+V++Y
Sbjct: 173 IQTIAFLSSVIGKGNGHGQST---NKGKMTGPVLILCPTSVIRNWENEFSEWAEFSVAVY 229
Query: 230 HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
HGPNRD++L K+E G+EVLITSFD++RIH +L ++WE+V+VDEAHRLKNEKSKLY A
Sbjct: 230 HGPNRDLVLGKIENQGLEVLITSFDTFRIHDKVLCGISWELVVVDEAHRLKNEKSKLYTA 289
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
CL + T+ R GLTGTIMQNKIMEL+NLFDWV PG LG REHFR +YDEPLK GQRL+APE
Sbjct: 290 CLGITTQKRFGLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPE 349
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
RF+++AD RK+HLV++LR++LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR YRR+LQ
Sbjct: 350 RFVQVADARKKHLVSILREFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQ 409
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLD------------NLDGCDSCPFCLVLPCLVK 457
P+IQ LINKD+ CSCGSPL QVECCKR + N +GC CPFCLVLP LVK
Sbjct: 410 PDIQILINKDVRCSCGSPLPQVECCKRTEPDGVIWSYLHRENPEGCSICPFCLVLPFLVK 469
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
LQQISNHLELIKPNP+DE +KQ+KDAELA+AVFG DIDLVGG A++E+F+GLSD ++CGK
Sbjct: 470 LQQISNHLELIKPNPKDELEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSDAENCGK 529
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
MRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N RQSLVD+
Sbjct: 530 MRALERLLSLWTGQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDE 589
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FN SPSKQVFLISTRAG LG+NLVSANRVVIFDP+WNPAQDLQAQDRSFR+GQ+RHV VF
Sbjct: 590 FNRSPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQRRHVTVF 649
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
RLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+E+RYFEG
Sbjct: 650 RLLGAGSLEELIYSRQIYKQQLSNIAVSGKIERRYFEG 687
>gi|413933789|gb|AFW68340.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 660
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/720 (60%), Positives = 531/720 (73%), Gaps = 75/720 (10%)
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST 223
MGLGKTIQTIAFL++V GK + NK G VLI+CP+SVI+NWE EFS W+
Sbjct: 1 MGLGKTIQTIAFLSSVIGKGNGHGQST---NKGKMTGPVLILCPTSVIRNWENEFSEWAE 57
Query: 224 FNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEK 283
F+V++YHGPNRD++L K+E G+EVLITSFD++RIH +L ++WE+V+VDEAHRLKNEK
Sbjct: 58 FSVAVYHGPNRDLVLGKIENQGLEVLITSFDTFRIHDKVLCGISWELVVVDEAHRLKNEK 117
Query: 284 SKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQ 343
SKLY ACL + T+ R GLTGTIMQNKIMEL+NLFDWV PG LG REHFR +YDEPLK GQ
Sbjct: 118 SKLYTACLGITTQKRFGLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQ 177
Query: 344 RLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY 403
RL+APERF+++AD RK+HLV++LR++LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR Y
Sbjct: 178 RLSAPERFVQVADARKKHLVSILREFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVY 237
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD------------NLDGCDSCPFCLV 451
RR+LQ P+IQ LINKD+ CSCGSPL QVECCKR + N +GC CPFCLV
Sbjct: 238 RRMLQQPDIQILINKDVRCSCGSPLPQVECCKRTEPDGVIWSYLHRENPEGCSICPFCLV 297
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
LP LVKLQQISNHLELIKPNP+DE +KQ+KDAELA+AVFG DIDLVGG A++E+F+GLSD
Sbjct: 298 LPFLVKLQQISNHLELIKPNPKDELEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSD 357
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
++CGKMRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N R
Sbjct: 358 AENCGKMRALERLLSLWTGQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNAR 417
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
QSLVD+FN SPSKQVFLISTRAG LG+NLVSANRVVIFDP+WNPAQDLQAQDRSFR+GQ+
Sbjct: 418 QSLVDEFNRSPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRYGQR 477
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN 691
RHV VFRLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+E+RYFEGVQD K+FQGELFGICN
Sbjct: 478 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIERRYFEGVQDDKKFQGELFGICN 537
Query: 692 LFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRK 751
LFRDLSD LFT I+ +H + +V+ + +T +
Sbjct: 538 LFRDLSDKLFT-RIVYAHRNE-------------------DVVNMRTDGREKGGADETVQ 577
Query: 752 SSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRN 811
SS E+ ++ M Y+ V + ++KK+E
Sbjct: 578 SSLEELLSKNETKHTAMEKSYSSEEKREVARSYSLEQKKKE------------------- 618
Query: 812 LLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
C +AS ++E+ SKW+LSA+P R ++LQDYR++KK
Sbjct: 619 -FSC------IASFMGMDDLEF--------------SKWLLSASPHQRSEVLQDYRRKKK 657
>gi|302782409|ref|XP_002972978.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii]
gi|300159579|gb|EFJ26199.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii]
Length = 937
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/723 (56%), Positives = 525/723 (72%), Gaps = 36/723 (4%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMG 165
Q + GP+EPL+LS +G ++VPA IN RLLEHQREGV+FLY LYK K GGILGDDMG
Sbjct: 89 QSEKEGPYEPLLLSDEGSPERVEVPAPINSRLLEHQREGVRFLYNLYKQKIGGILGDDMG 148
Query: 166 LGKTIQTIAFLAAVFGKDESSDSTILKDN---KVDKKGYVLIICPSSVIQNWEIEFSRWS 222
LGKTIQ+IAF+AA+ D + KK VL++CP+SVI+NW+ EF W
Sbjct: 149 LGKTIQSIAFIAAILHNDGELFRLPFRSKANLSEAKKKVVLVLCPTSVIENWQREFEAWG 208
Query: 223 TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNE 282
+F + +YHG R+ I++K+ ++V+ITS D++RIHGS L E++W+ VIVDEAHRLKNE
Sbjct: 209 SFPLGVYHGAQREAIVDKVRRDELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNE 268
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
KS+LY AC L+T+ R GLTGTI+QNK+++L+N+F+W APG LGTREHFR +YDEP+K G
Sbjct: 269 KSQLYKACCRLRTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQG 328
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRA 402
Q+++A + + +A++R+QHL+AVLR+Y LRRTK+ETIGHL+ GKED V+FC MS +Q+R
Sbjct: 329 QKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRV 388
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCL 450
Y+RLL+ P+ QCL+ K+ PC CGS +CC R N DGC+SCP CL
Sbjct: 389 YKRLLESPDFQCLVRKNEPCGCGSEEPSSKCCLRTAPKGPIWSYLHKGNPDGCESCPCCL 448
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
VLPCL KLQQ+SNHLEL+KPN D+ +K+ KDA AS VFG D +GG +ESF+GLS
Sbjct: 449 VLPCLNKLQQVSNHLELLKPNLSDDIEKRTKDAAFASLVFGDDAPSLGGIQPDESFLGLS 508
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
D ++CGKM AL+ L+ W S+GDK+LLFSYSVRML ILEKFLIR+GY F RLDGSTP N
Sbjct: 509 DSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNA 568
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ +VD+FN+SPSKQVFLISTRAGGLGLNLVSANRVV+FDPNWNPAQDLQAQDRSFRFGQ
Sbjct: 569 RQGIVDEFNTSPSKQVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQ 628
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC 690
KRHV VFRLL+AGSLEEL+YTRQ+YKQQL N+AV+G EKRYFEGVQD K +GELFG+
Sbjct: 629 KRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVTGNREKRYFEGVQDSKGDKGELFGLS 688
Query: 691 NLFRDLSDNLFTSEIIESHEEQGQ--QQERHHCTN-----------------QGFKGLET 731
NLFRDL D +FTS+IIE HEE+ Q E + + + +
Sbjct: 689 NLFRDLQDKVFTSDIIEQHEERLMKIQVESYDSDSDGPCRPRRGRPRALENDGDEEEDDE 748
Query: 732 HIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKE 791
H VS L+ + + +D E + +L G+VYAH+N+++VN + +K E
Sbjct: 749 HGVSG--LARLVKENMQDSQKTDEEETVGLQDMLTKSGVVYAHKNEEVVNARLLRGQKNE 806
Query: 792 ESI 794
E +
Sbjct: 807 EPV 809
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 833 YSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRK 870
+S LA+F G+ V EFS+W++SA+ RE+LL ++R+RK
Sbjct: 900 FSELAKFKGLGVKEFSQWMVSASQKEREELLANFRERK 937
>gi|302823493|ref|XP_002993399.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii]
gi|300138830|gb|EFJ05584.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii]
Length = 738
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/775 (54%), Positives = 549/775 (70%), Gaps = 53/775 (6%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GP+EPLVLS + ++VPA IN RLLEHQREGV+FLY LYK K GGILGDDMGLGKTI
Sbjct: 1 GPYEPLVLSDEESPERVEVPAPINSRLLEHQREGVRFLYNLYKQKIGGILGDDMGLGKTI 60
Query: 171 QTIAFLAAVFGKDESSDSTILKDN---KVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS 227
Q+IAF+AA+ D + KK VL++CP+SVI+NW+ EF W +F +
Sbjct: 61 QSIAFIAAILHNDGELFRLPFRSKANLSEAKKKVVLVLCPTSVIENWQREFEAWGSFPLG 120
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
+YHG R+ I++K+ ++V+ITS D++RIHGS L E++W+ VIVDEAHRLKNEKS+LY
Sbjct: 121 VYHGAQREAIVDKVRRDELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNEKSQLY 180
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
AC L+T+ R GLTGTI+QNK+++L+N+F+W APG LGTREHFR +YDEP+K GQ+++A
Sbjct: 181 KACCRLRTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISA 240
Query: 348 PERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
+ + +A++R+QHL+AVLR+Y LRRTK+ETIGHL+ GKED V+FC MS +Q+R Y+RLL
Sbjct: 241 SQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLL 300
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCL 455
+ P+ QCL+ K+ PC CGS +CC R N DGC+SCP CLVLPCL
Sbjct: 301 ESPDFQCLVRKNEPCGCGSEEPSSKCCLRTAPKGPIWSYLHKGNPDGCESCPCCLVLPCL 360
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
KLQQ+SNHLEL+KPN D+ +K+RKDA AS VFG D +GG +ESF+GLSD ++C
Sbjct: 361 NKLQQVSNHLELLKPNLSDDIEKRRKDAAFASLVFGDDAPSLGGIQPDESFLGLSDSQNC 420
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GKM AL+ L+ W S+GDK+LLFSYSVRML ILEKFLIR+GY F RLDGSTP N RQ +V
Sbjct: 421 GKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIV 480
Query: 576 DDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D+FN+SPSKQV FLISTRAGGLGLNLVSANRVV+FDPNWNPAQDLQAQDRSFRFGQKRHV
Sbjct: 481 DEFNTSPSKQVVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHV 540
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
VFRLL+AGSLEEL+YTRQ+YKQQL N+AV+G EKRYFEGVQD K +GELFG+ NLFR
Sbjct: 541 TVFRLLAAGSLEELIYTRQIYKQQLFNLAVTGNREKRYFEGVQDSKGDKGELFGLSNLFR 600
Query: 695 DLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSD 754
DL D +FTS+IIE HEE+ L V S DS++ + R+
Sbjct: 601 DLQDKVFTSDIIEQHEER----------------LMKIQVESYDSDS--DEPCRPRRGRP 642
Query: 755 PEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSSRPPPIHSKRRNLLD 814
+ + ++ G+ R + +P QR + + ++L P +K++
Sbjct: 643 RALEDGDEEEDDEHGVSGLAR----LETKPK-QRHRSDQTAKELDRSKEPTAAKQK---- 693
Query: 815 CADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKR 869
+K+ +S LA+F G+ V EFS+W++SA+ RE+LL ++R+R
Sbjct: 694 ----------PATKKSELFSELAKFKGLGVKEFSQWMVSASQKEREELLANFRER 738
>gi|413933788|gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 630
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/609 (62%), Positives = 458/609 (75%), Gaps = 35/609 (5%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNF 61
MSL R KE+L CS+ S Q + +PRRPPK+SL+QQL RL +
Sbjct: 1 MSLNR-LKETLHACSSSSSEPRTQPRSPQHPAR----LPRRPPKTSLSQQLLRLEAAASS 55
Query: 62 SL-----PQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGR-------HQLGQFQFDH 109
S P Q P R P+EK D E E E E+ R H +
Sbjct: 56 SSFFSSRPLQLPPAPR--PPIEKPRE-DVEPPSSEDEDERKSRPIIRRCLHPPPAAALES 112
Query: 110 TGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKT 169
GP+EPLVLS GE+P++QVP SINCRLL HQR+GV+FLY LY+N HGG+LGDDMGLGKT
Sbjct: 113 RGPYEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDDMGLGKT 172
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY 229
IQTIAFL++V GK + NK G VLI+CP+SVI+NWE EFS W+ F+V++Y
Sbjct: 173 IQTIAFLSSVIGKGNGHGQST---NKGKMTGPVLILCPTSVIRNWENEFSEWAEFSVAVY 229
Query: 230 HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
HGPNRD++L K+E G+EVLITSFD++RIH +L ++WE+V+VDEAHRLKNEKSKLY A
Sbjct: 230 HGPNRDLVLGKIENQGLEVLITSFDTFRIHDKVLCGISWELVVVDEAHRLKNEKSKLYTA 289
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
CL + T+ R GLTGTIMQNKIMEL+NLFDWV PG LG REHFR +YDEPLK GQRL+APE
Sbjct: 290 CLGITTQKRFGLTGTIMQNKIMELFNLFDWVVPGCLGDREHFRAYYDEPLKQGQRLSAPE 349
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
RF+++AD RK+HLV++LR++LLRRTKEETIGHLM+GKEDN+VFC MSD+QKR YRR+LQ
Sbjct: 350 RFVQVADARKKHLVSILREFLLRRTKEETIGHLMLGKEDNIVFCKMSDVQKRVYRRMLQQ 409
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDGCDSCPFCLVLPCLVK 457
P+IQ LINKD+ CSCGSPL QVECCKR +N +GC CPFCLVLP LVK
Sbjct: 410 PDIQILINKDVRCSCGSPLPQVECCKRTEPDGVIWSYLHRENPEGCSICPFCLVLPFLVK 469
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
LQQISNHLELIKPNP+DE +KQ+KDAELA+AVFG DIDLVGG A++E+F+GLSD ++CGK
Sbjct: 470 LQQISNHLELIKPNPKDELEKQKKDAELAAAVFGADIDLVGGTAKSENFMGLSDAENCGK 529
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
MRALE+L+ W +GDKILLFSYSVRMLDILEKFLIRKGY FSR DG+TP N RQSLVD+
Sbjct: 530 MRALERLLSLWTGQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQSLVDE 589
Query: 578 FNSSPSKQV 586
FN SPSKQ+
Sbjct: 590 FNRSPSKQL 598
>gi|356515168|ref|XP_003526273.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Glycine max]
Length = 483
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/461 (74%), Positives = 391/461 (84%), Gaps = 20/461 (4%)
Query: 96 KFGRHQLGQFQFDHTG-PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKN 154
KF H+L QFQFDHTG FEPL+LS GE+P++QVPASINC+LLE+QREGV+FLY LYKN
Sbjct: 30 KFASHKLPQFQFDHTGLIFEPLLLSSHGEFPMVQVPASINCKLLEYQREGVRFLYGLYKN 89
Query: 155 KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNW 214
HGG LGDDM LGKTIQ IAFLAAVFGK+ S L +N+V+K+ + LIICP+SVI NW
Sbjct: 90 NHGGTLGDDMVLGKTIQAIAFLAAVFGKEGQS---TLNENRVEKRDHALIICPTSVIHNW 146
Query: 215 EIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
E EFS+WS+F+VSIYHG NRD+I +KLEA VE+LITSFD+YRIHGS L ++NW IVI+D
Sbjct: 147 ESEFSKWSSFSVSIYHGANRDLIYDKLEANEVELLITSFDTYRIHGSSLLDINWNIVIID 206
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
EAH+L NEKSKLY ACLE+KT R GLTGT MQNKIMEL+NLFDWVAPGSLGTREHFREF
Sbjct: 207 EAHQLTNEKSKLYKACLEIKTLRRYGLTGTAMQNKIMELFNLFDWVAPGSLGTREHFREF 266
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
YDEPLKHGQR TAP+RF++IA++RKQHLVAVL+KYLLRRTKE TIG+LMMGKEDN+VFC
Sbjct: 267 YDEPLKHGQRSTAPDRFVQIANKRKQHLVAVLQKYLLRRTKEXTIGYLMMGKEDNIVFCA 326
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL------------DNLDG 442
MSD+QKR YRR+LQLP+IQCLINK+LPCSCGSPLTQVECCKRL DN DG
Sbjct: 327 MSDVQKRVYRRMLQLPDIQCLINKNLPCSCGSPLTQVECCKRLVPDGAIWPYLHRDNHDG 386
Query: 443 CDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQ 502
CDSC FCLVLPCLVKLQQISNHLELIKPN +D+PDKQ KDAE A+AVFGPDIDL GGN Q
Sbjct: 387 CDSCSFCLVLPCLVKLQQISNHLELIKPNLKDDPDKQSKDAEFAAAVFGPDIDLXGGNTQ 446
Query: 503 NESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
NESF+GLSDV C LEK + SW S+ DK+LLFSYSVR
Sbjct: 447 NESFMGLSDVTHC----XLEKXLXSWFSQSDKVLLFSYSVR 483
>gi|357474391|ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355508535|gb|AES89677.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
Length = 1283
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/502 (61%), Positives = 366/502 (72%), Gaps = 50/502 (9%)
Query: 37 LIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEK 96
L I R+PPKSSLA L+ L + + + +++++ ++ ++E + K K
Sbjct: 321 LPINRKPPKSSLAHHLRLLDDPDDPPFQPHDFLSQQQELKLDDEEEEEEEPEIKCVPV-K 379
Query: 97 FGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQV--------------------------- 129
F + Q QFDHTGPFEPL+LS DGE P++QV
Sbjct: 380 FTSVKSSQIQFDHTGPFEPLLLSSDGELPLVQVSGSNPPGANYLCLGQVHTEPCSGFNWA 439
Query: 130 --PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
PASINCRLLEHQR GVKFLY LYKN GGILGDDMGLGKTIQTIAFLAA+FGK+ S
Sbjct: 440 SVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMGLGKTIQTIAFLAAIFGKEGDS- 498
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVE 247
IL + +V+K+ VLIICPSS+IQNWE EFS+WS F+V+IYHG NRD+I +KLEA GVE
Sbjct: 499 --ILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAIYHGANRDLIYDKLEANGVE 556
Query: 248 VLITSFDSYRIHG-SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
VLITSFD+YRIHG S LS++ W VI+DEAHRLKNEKSKLY ACLE+KT R GLTGT+M
Sbjct: 557 VLITSFDTYRIHGNSSLSDIQWNTVIIDEAHRLKNEKSKLYKACLEIKTLRRYGLTGTVM 616
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QNKI+EL+N+FD VAPGSLGTREHFREFYDEPLKHGQR TAP+RF++IA++RKQHLV+VL
Sbjct: 617 QNKILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDRFVQIANKRKQHLVSVL 676
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
KY+LRRTKEETIGHLMMGKEDN+VFC MSDLQKR YRR++QLP+IQCLINKDLPCSCGS
Sbjct: 677 NKYMLRRTKEETIGHLMMGKEDNIVFCAMSDLQKRIYRRMIQLPDIQCLINKDLPCSCGS 736
Query: 427 PLTQVECCKRL------------DNL-DGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
PLTQVECCKR DNL DGCDSCP+C+VLPCLVKLQQ+ + ++ R
Sbjct: 737 PLTQVECCKRTVPDGAIWPYLHKDNLDDGCDSCPYCIVLPCLVKLQQVKS---VVVTGMR 793
Query: 474 DEPDKQRKDAELASAVFGPDID 495
K A L S D+D
Sbjct: 794 KRGVNYLKKAHLLSVKMKVDMD 815
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 292/433 (67%), Positives = 335/433 (77%), Gaps = 32/433 (7%)
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
C FC QISNHLELIKPNP+D+PDKQ KDA+ A+AV+GPDIDLVGG+ QNES
Sbjct: 872 CFFC----------QISNHLELIKPNPKDDPDKQVKDAKFAAAVYGPDIDLVGGSMQNES 921
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
F+GLSD + CGKMRALEKL+ SW S GDK+LLFSYSVRMLDILEKF+IRKGY FSRLDGS
Sbjct: 922 FLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVRMLDILEKFIIRKGYCFSRLDGS 981
Query: 566 TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
TP+NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP+QDLQAQDRS
Sbjct: 982 TPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRS 1041
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGE 685
FR+GQKRHV+VFRLLSAGSLEELVY+RQVYKQQLSNIAVSGK+EKRYFEGVQDCK FQGE
Sbjct: 1042 FRYGQKRHVVVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKAFQGE 1101
Query: 686 LFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETH----IVSSKDSNT 741
LFGICNLFRDLSD LFTSEI+ESHE TN+ GLET S+++N
Sbjct: 1102 LFGICNLFRDLSDKLFTSEIVESHE-----------TNKK-DGLETEQQKKTYISEETNL 1149
Query: 742 LLSTGSKTRKSSDPEMARTSKPLL--EDMGIVYAHRNDDIVNKQPGFQRK--KEESIPQD 797
L+S S+TR S+ + TSKP + ED+GIVYAHRN+DIVN +P QR+ + D
Sbjct: 1150 LVSE-SETRSCSE-SVRTTSKPDIEFEDVGIVYAHRNEDIVNSRPVIQRQLSTSSTSSSD 1207
Query: 798 LSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEYSLLARFMGMDVFEFSKWILSATPS 857
S P R DC K+ + +RK ++SLLA MGM+ FSKW+LSATP
Sbjct: 1208 GQSEPSSTLVHERKKSDCVPKKQKILLIDERKRAQFSLLAESMGMEDLAFSKWLLSATPV 1267
Query: 858 AREKLLQDYRKRK 870
REK+L DY+++K
Sbjct: 1268 EREKVLIDYKRKK 1280
>gi|255077555|ref|XP_002502414.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517679|gb|ACO63672.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1050
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/603 (46%), Positives = 380/603 (63%), Gaps = 43/603 (7%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E + VPA++NC L E+QR+GV+FLY L+ +K GG+L DDMGLGKTIQT+AFLAAV
Sbjct: 202 EEDALYVPAALNCHLREYQRDGVRFLYALWASKRGGVLADDMGLGKTIQTVAFLAAVLRS 261
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS------TFNVSIYHGPNRDM 236
++ S L++CP SV+ NWE E RW F HG +RD
Sbjct: 262 PRANPSPPP----------ALVVCPMSVLDNWETELKRWGRMLPGGEFCTERVHGQSRDD 311
Query: 237 ILEKLEACG--VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ A G E+++T++D+ + + W + DEAH LKN+K+K Y A L+
Sbjct: 312 AWTRSIADGSRCEIVLTTYDTLVRNSDAFAARTWSACVFDEAHSLKNDKTKRYEAAYSLQ 371
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
R GL+GT+MQN EL+ LFDW PGSLG +HF+E+Y + ++ QR + +
Sbjct: 372 KERRFGLSGTVMQNSYDELWCLFDWAYPGSLGDVKHFKEYYSKVMQQAQRHGVDDTTLGR 431
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
++ + L +LRKY+L+RTK++T+ + K DNVVFC MS LQ RA RRLL++ E Q
Sbjct: 432 GRDKAEQLRRLLRKYMLKRTKKDTLADQLPQKADNVVFCDMSALQIRASRRLLEMEEFQL 491
Query: 415 LINKDLPCSCGSPLTQVECC-----------------KRLDNLDGCDSCPFCLVLPCLVK 457
LI + PC CGS + CC K + +G CP+C+ P +
Sbjct: 492 LIRHEEPCDCGSGEKRARCCYQECTGPAPIWRSYDHEKHVTARNGY-LCPYCMTFPLMQT 550
Query: 458 LQQISNHLELIKPNPRDE--PDKQRKDAE----LASAVFGPDIDLVGG-NAQNESFIGLS 510
L ++SNHLEL+KP+P DE D+ R+ E +A A G D LVGG + + F L
Sbjct: 551 LIKVSNHLELLKPDPEDEYGNDEAREKFEKARVVARAALGEDAHLVGGADHPDMDFARLG 610
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
D +CGK+ ALEKL+ W + DK+LLFS S R+L +LEKFL ++GY ++RLDGST
Sbjct: 611 DATNCGKLLALEKLLSLWHRQRDKVLLFSTSARLLTVLEKFLTQRGYVYARLDGSTAGKD 670
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ LVDDFN+S S VFL+ST AGG+GLN+ SANRVVIFDPNWNPA+D QAQDR++R GQ
Sbjct: 671 RQKLVDDFNASESLFVFLLSTGAGGVGLNITSANRVVIFDPNWNPAKDAQAQDRAYRIGQ 730
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC 690
+R V V+RLL+AG++EE+VY RQVYKQQ SN+AV E+RYFEGVQ K+ QGELFG+
Sbjct: 731 RRDVDVYRLLAAGTIEEMVYQRQVYKQQQSNVAVDASKERRYFEGVQGDKQHQGELFGLS 790
Query: 691 NLF 693
N+F
Sbjct: 791 NMF 793
>gi|384245660|gb|EIE19153.1| hypothetical protein COCSUDRAFT_20093, partial [Coccomyxa
subellipsoidea C-169]
Length = 663
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/634 (44%), Positives = 394/634 (62%), Gaps = 52/634 (8%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
++VP SIN L E+QREG++FL++ Y K G IL DDMGLGKT+QTI F+AA+ GK S
Sbjct: 1 LKVPGSINRYLREYQREGIQFLFRQYALKQGAILADDMGLGKTVQTIGFVAAILGKTGTS 60
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEA 243
+D + ++ +LI+ PSSV+ NW+ EFS W F V IYHG +R ++ +
Sbjct: 61 ADLQPAPADANSRQKLILIVAPSSVLTNWQREFSTWGAFRVGIYHGSAESRAAAVQSILH 120
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-------YMACLELKTR 296
E+++T++D++RI+ L E++W + I DEAH+LKN++ Y A L+T+
Sbjct: 121 GTAEIMLTTYDTFRINIDRLQEIDWHVAIFDEAHKLKNKRVSTKNDNISTYGAATSLRTK 180
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R GLTGT MQN EL++L W P +G + F E Y P+K GQ+ + + A
Sbjct: 181 RRYGLTGTAMQNDYQELWSLLHWANPLKMGAWDQFLEHYVNPMKQGQKRDCTDLQLAKAQ 240
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+R+ L +L+ +LLRRTKE TI + K DN+VFC ++ LQ RAYR Q P Q L+
Sbjct: 241 KRQVQLDKLLKCFLLRRTKESTIKDQLPKKTDNIVFCKLAPLQMRAYR---QAPNFQLLV 297
Query: 417 NKDLPCSCGSPLTQVECCKRLD------------NLDGCDS--------------CPFCL 450
+ C C S + +CC +L CD+ CP+CL
Sbjct: 298 RAEETCDCASGEMRAKCCYTEACPDQGGVLWPHFHLCTCDNIYDEFDNPKYGRLRCPYCL 357
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA-----ELASAVFGPDIDLVGGNAQNES 505
VLPCL LQ+I+NHLELIK +P D + + A ELA VFG D++ GG+ + +
Sbjct: 358 VLPCLTILQKIANHLELIKVDPADRAVTEDEWALPRARELAQMVFGEDLEAAGGDTLDRN 417
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGD-KILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
++ +S CGKM ALE+L+ W+S G+ K+LLFS+SV+ML+I+E+ L+R GY+++RLDG
Sbjct: 418 WLHVSSSAHCGKMAALEQLLQLWSSAGNNKVLLFSHSVKMLNIIEQLLVRAGYNYARLDG 477
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
ST RQ+L D FN SPS +FLIST AGGLGLNL +AN+VVI DP+WNP+ DLQAQDR
Sbjct: 478 STKREERQALCDGFNQSPSVFLFLISTTAGGLGLNLTAANKVVIIDPSWNPSHDLQAQDR 537
Query: 625 SFRFGQKRHVIVFRLLSAG-------SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQ 677
+FR GQ+R V V+RL++AG +LEE++YTRQVYKQQ S +A G E RYF GVQ
Sbjct: 538 AFRIGQRRDVAVYRLIAAGMHFHTQRTLEEMIYTRQVYKQQQSAVATEGSKETRYFYGVQ 597
Query: 678 DCKEFQGELFGICNLFRDLSDNLFTSEIIESHEE 711
K +GELFGI NLFR+ +D + +I + +
Sbjct: 598 GDKGNKGELFGITNLFRETADKVNAHDIFDQERQ 631
>gi|303275450|ref|XP_003057019.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226461371|gb|EEH58664.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 665
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 281/575 (48%), Positives = 373/575 (64%), Gaps = 16/575 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VPA++NC L E+QREGV FLYKLY + GG+LGDDMGLGKTIQTIAFLAAV S D+
Sbjct: 91 VPAALNCYLREYQREGVMFLYKLYATRKGGVLGDDMGLGKTIQTIAFLAAVLKSPASFDA 150
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS------TFNVSIYHGPNRDMILE--K 240
LI+CP+SV+ NWE E +RW F V HG ++ K
Sbjct: 151 CTGAPPPP-----ALIVCPTSVLTNWERELARWGEHLPDGGFVVEKVHGADKADAWARVK 205
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+A + +++T++D++R+ ++ W +V+ DEAHRLKN+K+ LY A L R G
Sbjct: 206 AKASDIGIVLTAYDTFRLGVDEMTSQRWSVVVFDEAHRLKNDKTMLYEAARRLPRERRFG 265
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT+MQN EL+ L DW PGSLG + F+E+Y + ++ QR A + + +R
Sbjct: 266 LTGTVMQNSYDELWCLLDWACPGSLGGLKAFKEYYSKYMQQAQRFGADDYTLGRGRDRAD 325
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L +LR+Y+L+RTK+ + + K DNVVFC +S LQ+R YRRLL P++Q L+
Sbjct: 326 QLKRLLRRYVLKRTKKVVLAGQLPEKSDNVVFCELSPLQRRVYRRLLDSPDMQLLVRFAE 385
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE-PDKQ 479
C CGS + CC DG +CP C+ L + L ++SNHLEL+KP+ DE +K
Sbjct: 386 DCDCGSGERRSSCCYAAPP-DGHRACPHCMSLVYINILLRLSNHLELLKPDHGDEDKEKV 444
Query: 480 RKDAELASAVFGPDIDLVGG-NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
+D +A G D L+GG + Q+ F +S +CGK+ ALEKL+ W DK+LLF
Sbjct: 445 ARDEVVAKFALGEDAHLLGGADRQDNDFARISAATNCGKLLALEKLLEIWHRANDKVLLF 504
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
S S R+LDILEKFL R+GY + RLDG T N RQ LVDDFN+S S VFL+ST+AGG+GL
Sbjct: 505 SKSTRLLDILEKFLSRRGYVYCRLDGGTAQNARQPLVDDFNNSSSMFVFLLSTKAGGVGL 564
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
N+ SANRVV+FDP+WNPA DLQAQDR++R GQ+R V V+R ++A ++EE+VY RQVYKQQ
Sbjct: 565 NITSANRVVVFDPDWNPALDLQAQDRAYRIGQRRDVNVYRFIAADTIEEIVYQRQVYKQQ 624
Query: 659 LSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
SN+AV E+RYFEGVQ K QGELFG+ NLF
Sbjct: 625 QSNVAVDAVRERRYFEGVQGDKRRQGELFGLENLF 659
>gi|348669589|gb|EGZ09411.1| hypothetical protein PHYSODRAFT_318176 [Phytophthora sojae]
Length = 1050
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/612 (41%), Positives = 372/612 (60%), Gaps = 45/612 (7%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK---- 182
++V A++N L ++QREGV+FLY Y+ G ILGDDMGLGKTIQ IAFL+AV GK
Sbjct: 236 LEVCANLNSYLFDYQREGVEFLYSAYQRDTGAILGDDMGLGKTIQVIAFLSAVLGKHGDY 295
Query: 183 -DESSDSTILKDNK----------VDKKGY--------VLIICPSSVIQNWEIEFSRWST 223
D+ + +L + + G+ + I+ P+S++QNWE E W +
Sbjct: 296 RDKDAWKALLHQRRERYSNTSGGHPEDTGFSFAGEVAPIFIVMPASLLQNWEHELHTWMS 355
Query: 224 FNVSIYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
+ I G +R+ +++++ E++I S+D +++ + L ++ WE+VI+DE H LKN
Sbjct: 356 CSTIILRGKPSDRNAMIDQIARGEYEIVICSYDILKMYLARLHKIPWEMVILDEMHCLKN 415
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
+++L A +K + ++GLTGT+MQN EL+ L D +APG++G+ FR +Y + +K+
Sbjct: 416 PEAQLTKAVKAIKCKRKLGLTGTLMQNNEKELHCLVDTIAPGAIGSWAEFRMYYGDDIKY 475
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
G++ +A ++ + ++++ L LR Y RR KE + K D VVFC ++ LQ
Sbjct: 476 GRKKSAAPEAVKRSHQKEKELRKKLRPYYFRREKEINPTFQEVKKSDQVVFCDLTPLQMA 535
Query: 402 AYRRLLQLPEIQCLINKDLPCSC--GSPLTQVECC---------------KRLDNLDGCD 444
AY R+L +PE + L + C C S + +CC +R C
Sbjct: 536 AYERVLAMPEFELLRRGEEQCDCRRDSKEKRKKCCYKTPMDLGDAPGLLYERFHEDGACK 595
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
+CP C+ LPC+ L ++SNHLEL+K NP D P+ Q AE A FG D+D+VGG Q
Sbjct: 596 NCPNCMGLPCVAMLLKLSNHLELLKVNPHDAPELQHYQAEFARTAFGSDLDVVGGVNQVS 655
Query: 505 SFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRL 562
SF + + K+CGKM LEKL+ W + ++ L+FS S RMLDI++ FLI K +SRL
Sbjct: 656 SFQEMCAISTKTCGKMIVLEKLLAVWKKRKERTLIFSRSTRMLDIIQLFLITKATRYSRL 715
Query: 563 DGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
DG+T R +V+DFN+ S VFLISTRAGG+GLNL SA VVIFDP+WNP+ D QA
Sbjct: 716 DGNTKVEERLQMVNDFNNPGSNTTVFLISTRAGGVGLNLQSATNVVIFDPSWNPSHDCQA 775
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKE 681
QDR++R GQ + V V+RL++ G++EE++Y RQ+YKQQLS+ + G RYFEGVQ +
Sbjct: 776 QDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTLKGANAPRYFEGVQGNPQ 835
Query: 682 FQGELFGICNLF 693
+GELFGI NL
Sbjct: 836 QRGELFGIANLI 847
>gi|301093032|ref|XP_002997365.1| DNA repair and recombination protein RAD26 [Phytophthora infestans
T30-4]
gi|262110763|gb|EEY68815.1| DNA repair and recombination protein RAD26 [Phytophthora infestans
T30-4]
Length = 1039
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/613 (41%), Positives = 368/613 (60%), Gaps = 46/613 (7%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK---- 182
++V A++N L ++QREGV+FL Y+ G ILGDDMGLGKTIQ IAFL+A+ GK
Sbjct: 234 LEVCANLNSYLFDYQREGVEFLLSAYQRDTGAILGDDMGLGKTIQVIAFLSAIMGKHGDR 293
Query: 183 -DESSDSTILKDNK-----------VDKKGY--------VLIICPSSVIQNWEIEFSRWS 222
D+ + +L + + G+ + I+ P+S++QNWE E W
Sbjct: 294 RDKDAWRALLHTRRERYSESGAVGHPEDSGFSFAGEVAPIFIVMPASLLQNWEQELHTWM 353
Query: 223 TFNVSIYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
+ I G +RD +++++ E++I S+D +++ S L ++ WE VI+DE H LK
Sbjct: 354 SCTTIILRGKPSDRDAMIDQIARGEYEIVICSYDILKMYLSRLHKIPWEAVILDEMHCLK 413
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N ++KL A + R ++GLTGT+MQN EL+ L D +APG++G+ F +Y + +K
Sbjct: 414 NPEAKLTKAVKAITCRKKLGLTGTLMQNNEKELHCLVDTIAPGAIGSWAEFSMYYGQDIK 473
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
+G++ +A ++ + ++++ L L Y LRR KE + K D VVFC ++ LQ
Sbjct: 474 YGRKKSAAPEAVKRSQQKEKELRQKLHPYYLRREKEINPTFQEVKKNDQVVFCDLTPLQM 533
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCG--SPLTQVECC---------------KRLDNLDGC 443
AY+R+L +PE Q L + C CG S + +CC +R C
Sbjct: 534 AAYQRVLAMPEFQLLQRGEERCDCGRDSGEKRKKCCYKTPSDIGDAPGLLYERFHEDGPC 593
Query: 444 DSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQN 503
+CP C+ LPC+ L ++SNHLEL+K NP D + Q +E AS FG D+D VGG Q
Sbjct: 594 KNCPNCMGLPCVAMLLKLSNHLELLKVNPHDGQELQHYQSEFASTAFGSDLDEVGGVDQV 653
Query: 504 ESFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
SF + + K+CGKM LEKL+ W + + L+FS S RMLDI++ FLI K +SR
Sbjct: 654 SSFQEMCAISTKTCGKMIVLEKLLSVWKKRRQRTLIFSRSTRMLDIIQLFLITKATKYSR 713
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
LDG+T R +V+DFNSS S VFLISTRAGG+GLNL SA VVIFDP+WNPA D Q
Sbjct: 714 LDGNTKVEERLQMVNDFNSSESNTTVFLISTRAGGVGLNLQSATNVVIFDPSWNPAHDCQ 773
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK 680
AQDR++R GQ + V V+RL++ G++EE++Y RQ+YKQQLS+ + G RYFEGVQ
Sbjct: 774 AQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTLKGSNAPRYFEGVQGNP 833
Query: 681 EFQGELFGICNLF 693
+ +GELFGI NL
Sbjct: 834 QQRGELFGIANLI 846
>gi|336257783|ref|XP_003343713.1| hypothetical protein SMAC_04371 [Sordaria macrospora k-hell]
gi|380091660|emb|CCC10792.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1171
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/709 (38%), Positives = 401/709 (56%), Gaps = 47/709 (6%)
Query: 106 QFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD + +P D E Y +PA I L ++Q EGVKFL++ + + G ILGDD
Sbjct: 179 KFDESSGIKPCQPYNDVELEYSAGTIPACIAQYLRDYQVEGVKFLHQKFVYQRGCILGDD 238
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL FGK DE + K + Y V+I+CP S+IQNW+ E +
Sbjct: 239 MGLGKTVQVAAFLTVAFGKTGDERDAKRMRKMRRAGDLWYPRVIIVCPGSLIQNWKNELN 298
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++V IYHG NR+ +L+ A +EV+IT++D+YR ++ V W+ V+ DE H L
Sbjct: 299 RWGWWHVDIYHGSNREDVLQSANAGRLEVMITTYDTYRNCHEAVNTVEWDCVVADECHVL 358
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
KN S+ A ++ RIGLTGT +QN+ EL+ L +W PG GTR + E +PL
Sbjct: 359 KNNVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTLLNWTNPGYFGTRAEWNESITKPL 418
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + + IA + LV +L ++ LRR K I H + K D VVFC ++D+
Sbjct: 419 TAGQSHDATLKQLSIARTTAKKLVQNLLPEFFLRRMKS-LIAHQLPKKSDKVVFCPLTDV 477
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q+ AY L + ++N PC C S CC + + DG + V P ++ L
Sbjct: 478 QRIAYENFLDGEHLTYILNAYHPCKCHSGRAAGWCCYKTLS-DGRSWKSY--VFPSIITL 534
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCG 516
Q+I+NHL L+ P+ D DKQR + + PD +L + +S + L+D + CG
Sbjct: 535 QKIANHLTLLIPSSSDPNDKQRSELNVLQTC-APDTWKELYD---KRDSMLTLADPEFCG 590
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
K + L KL+ W GDK+L+FS+SVR+L IL+ Y+ S LDG+ RQ +VD
Sbjct: 591 KWKILRKLLRFWHESGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALSYEERQRVVD 650
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
+FN+ P + VFLIST+AGG+GLN+ SAN+VVIFDP+WNP+ DLQAQDR++R GQ R V V
Sbjct: 651 EFNTDPRQFVFLISTKAGGVGLNITSANKVVIFDPHWNPSYDLQAQDRAYRIGQIRDVDV 710
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
FRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ K +GELFG+ NLF
Sbjct: 711 FRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKGVQRDKNKKGELFGLENLFTFH 770
Query: 697 SDNLFTSEI-----------------------IESHEEQGQQQERHHCTNQGFKGLET-- 731
+D + +I ++ +E+ ++ N G+ +
Sbjct: 771 ADQVVLRDIVNKTNIAEAKAGVNLTDIDLEKAVKDEDEELDFIKKESEDNDDDSGMSSLA 830
Query: 732 HIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
+V+++D + LL G + SD A +L G+ Y H N +++
Sbjct: 831 KLVTAEDPDKLLEAGKSKKPKSDAIAA-----ILASAGVEYTHENSEVI 874
>gi|156398438|ref|XP_001638195.1| predicted protein [Nematostella vectensis]
gi|156225314|gb|EDO46132.1| predicted protein [Nematostella vectensis]
Length = 614
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/577 (41%), Positives = 357/577 (61%), Gaps = 20/577 (3%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+QVPA INCRL ++QREGV+FLY+ Y++ +G ILGDDMGLGKT+Q IA L+A+ GK +
Sbjct: 2 LQVPAPINCRLRDYQREGVQFLYQHYRSNNGAILGDDMGLGKTVQVIALLSAILGKTGTR 61
Query: 187 DST----ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLE 242
I + +KG LI+CP S++ NW+ E W F V +YHG +++M++++
Sbjct: 62 ADVFGKYIGQGPSGKQKGVFLIVCPGSMLYNWKDELDTWGYFRVKMYHGSSKEMVMDQAA 121
Query: 243 ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
++V++T++D+ RI+ + VNW V++DE H+LK+ +K A LK + R GLT
Sbjct: 122 KGKLDVVLTTYDTLRINVTEFDCVNWLAVVMDEVHKLKDPSAKNTKAAKRLKVQRRFGLT 181
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN+ EL+ + DW PG LG+ F FY + ++ GQR A +R + + R
Sbjct: 182 GTPLQNRWSELWCVLDWANPGCLGSNLRFDAFYGKAIRKGQRHDANKRELALGRTRSSQF 241
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ L ++LRRTK+ HL K+D VVFC+++ Q+ Y LLQ P++Q + KD C
Sbjct: 242 QSKLNNWMLRRTKDLIAQHLPH-KDDKVVFCSLTPFQEDVYMALLQSPDVQLVRKKDYRC 300
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFC------LVLPCLVKLQQISNHLELIKPNPRDEP 476
CGS + +CC CP L++ C +++NH L+ P +
Sbjct: 301 DCGSGQNRGKCCY--------SCCPVSGEPLKSLLMRCFQLFLKVANHAALLMPGVKQTD 352
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D++++ + V V A+N SF LS+ + CGKM+ L+KL+ + K+L
Sbjct: 353 DQRKRAKAICEGVLTRHPHFVQSLAEN-SFQTLSNPEYCGKMKVLDKLLRMFEKDKCKVL 411
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LFSYS +L+ILE ++I +G FSRLDG T R +V +FN + + L+ST+AGGL
Sbjct: 412 LFSYSTELLNILENYVIGRGLVFSRLDGQTSPAQRMRVVREFNGNRDIFICLVSTKAGGL 471
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLN AN V+IFDP WNP+ DLQAQDR++R GQ+R V V RL+S+G++EE++Y RQ+YK
Sbjct: 472 GLNFTGANVVIIFDPTWNPSNDLQAQDRAYRIGQRRDVQVLRLISSGTIEEMMYLRQIYK 531
Query: 657 QQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
QQ++N A+SG E+RYF GV+ K+ +GELFGI NLF
Sbjct: 532 QQMANTAISGSTERRYFMGVEGEKDHKGELFGIENLF 568
>gi|21622371|emb|CAD37001.1| related to DNA repair protein RAD26 [Neurospora crassa]
Length = 1178
Score = 474 bits (1220), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/729 (38%), Positives = 409/729 (56%), Gaps = 50/729 (6%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEH 140
F D+EK EQ +F+ + +P KD E Y +PA I L ++
Sbjct: 156 FSDDEKGTRYEQRP---------KFEESSGIKPCRPYKDVELEYSAGIIPACIAQYLRDY 206
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDK 198
Q EGVKFL++ + + G ILGDDMGLGKT+Q AFL A FGK DE + K +
Sbjct: 207 QVEGVKFLHQKFVYQRGCILGDDMGLGKTVQVAAFLTAAFGKTGDERDAKRMRKMRRAGD 266
Query: 199 KGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSY 256
Y V+I+CP S+IQNW+ E RW ++V ++HG NR+ +L+ ++ +EV+IT++D+Y
Sbjct: 267 LWYPRVIIVCPGSLIQNWKNELDRWGWWHVDVFHGSNREDVLQAAKSGRIEVMITTYDTY 326
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
R ++ V W+ V+ DE H LKN S+ A ++ RIGLTGT +QN+ EL+ L
Sbjct: 327 RNCHEAVNTVEWDCVVADECHILKNTVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTL 386
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTK 375
+W PG GTR + E +PL GQ A + + IA + LV +L ++ LRR K
Sbjct: 387 LNWTNPGYFGTRAEWNESITKPLTAGQSHDATLKQLSIARTTAKKLVQNLLPEFFLRRMK 446
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
I H + K D VVFC ++D+Q+ AY L+ + ++N PC C S CC
Sbjct: 447 S-LIAHQLPKKSDKVVFCPLTDVQRDAYENFLEGEHVTFILNAYQPCKCHSGRAGGFCCY 505
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
+ + DG + V P ++ LQ+I+NHL L+ P+ D +KQR + + PD
Sbjct: 506 KTLS-DGRTWKSY--VFPSIITLQKIANHLTLLIPSSSDPKEKQRSELNVLQTC-APDTW 561
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
N ES + L++ + CGK + L KL+ W GDK+L+FS+SVR+L IL+
Sbjct: 562 KELYN-NRESMLSLANPEFCGKWKILRKLLRFWHESGDKVLVFSHSVRLLRILQHLFHNT 620
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
Y+ S LDG+ RQ +VD+FN+ P + VFLIST+AGG+GLN+ SAN+VVIFDP+WNP
Sbjct: 621 SYNVSFLDGALSYEERQRVVDEFNTDPRQFVFLISTKAGGVGLNITSANKVVIFDPHWNP 680
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+G
Sbjct: 681 SYDLQAQDRAYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKG 740
Query: 676 VQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI-- 733
VQ K +GELFG+ NLF +D + +I+ + E N +E +
Sbjct: 741 VQRDKNRKGELFGLENLFTFHADQVVLRDIV----NKTNIAEAKAGVNLTDIDMEKAVKD 796
Query: 734 -----------VSSKDSNTLLSTGSKTRKSSDP----EMARTSKP-------LLEDMGIV 771
KD +T +S+ +K + +P E +++ KP +L G+
Sbjct: 797 EDEELDFIKKESEDKDDDTGMSSLAKLVTAEEPDKLLEASKSKKPKSDAIAAILASAGVE 856
Query: 772 YAHRNDDIV 780
Y H N +++
Sbjct: 857 YTHENSEVI 865
>gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
Length = 616
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/619 (41%), Positives = 375/619 (60%), Gaps = 27/619 (4%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQR 142
FDD++ E+ + F+ H GP LS E IQ+PA+IN L E+QR
Sbjct: 1 FDDDDYERPR------------FKDAHAGPAITYRLSGATEATTIQIPANINRYLREYQR 48
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK------DNKV 196
EG++FLY YK G ILGDDMGLGKT+Q I F+AAV K + + + K +
Sbjct: 49 EGIQFLYNNYKANRGSILGDDMGLGKTVQIIGFIAAVLNKSGTKEDVMKKLWWKSSPSPT 108
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSY 256
+K+ LI+ P SV+ NW E + W F V +H ++D L++LE ++V++T+F++
Sbjct: 109 NKRQSFLIVSPGSVLYNWIDELNTWGHFKVGRFHASHKDETLQQLEKGRLDVVLTTFETL 168
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
R + L+ W VIVDEAHRLK+ KSK+ +A +K R RIGLTGT MQN++ E + L
Sbjct: 169 RNYLDDLNSFKWLAVIVDEAHRLKDGKSKVTIAMKNIKCRRRIGLTGTAMQNRLSEFWCL 228
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKE 376
DW PG LGT F++ Y+ P+K G++ +R + ++ + + L + ++ LRRTK
Sbjct: 229 LDWANPGCLGTLGTFQKDYESPIKQGRKFNVTKRELANSNLKSEELTKLHSQWFLRRTKA 288
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
I + K++ VVFC +S+LQ Y LL+ ++ ++ + PC CGS + +CC +
Sbjct: 289 -LIAEQLPKKDEKVVFCYLSELQNNLYEELLKNSDVDLIVRQSEPCDCGSKKNRGKCCYQ 347
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG--PDI 494
N+ G L++ L +++NH+ L+ PN +++ K E+ ++ P
Sbjct: 348 -TNIKG--EKINSLLMQYLQLFLKVANHVALLLPNSNQSEEQRNKAREICVRMYSNFPQF 404
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
+ NA S + LSD CGKM+ALE L+ + G K+LLFSYSV++L+ILE +++
Sbjct: 405 KSISSNA---SLLTLSDPLYCGKMKALEALLIKFKKDGSKVLLFSYSVQLLNILETYIMC 461
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
KG ++ RLDG+T R +V FN+ P + LIST+AG LGLN AN V+IFDPNWN
Sbjct: 462 KGINYCRLDGNTRIEQRADIVRKFNNDPQISLCLISTKAGSLGLNFTGANSVLIFDPNWN 521
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
PA DLQAQDR++R GQ+ V V+RL+++G++EE++Y RQ+YK QL+N+A+ E+RYF
Sbjct: 522 PAHDLQAQDRAYRIGQRCDVRVYRLITSGTIEEVMYLRQIYKLQLANVAMQNSKERRYFT 581
Query: 675 GVQDCKEFQGELFGICNLF 693
GV D KE GELFGI NLF
Sbjct: 582 GVADDKEQHGELFGIENLF 600
>gi|402081082|gb|EJT76227.1| helicase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1164
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/589 (43%), Positives = 361/589 (61%), Gaps = 12/589 (2%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
EY +PASI L ++Q G K+L++++ + GG+LGDDMGLGKT+Q AFLAA FGK
Sbjct: 196 EYSAGIIPASIARYLRDYQVTGAKYLHQMFVYQLGGMLGDDMGLGKTVQVAAFLAAAFGK 255
Query: 183 -DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILE 239
+ D L+ + + Y VLI+CP S+++NW+ E SRW +N+S+YHG +D IL+
Sbjct: 256 TGDVRDKRRLRKMRAVGRWYPKVLIVCPGSLLENWKQELSRWGWWNISVYHGKEKDDILQ 315
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ +E+++T++ +Y H ++ V W+ V+ DE H LK+ +S A + RI
Sbjct: 316 TAKSGFLEIMLTTYQTYTRHQEYVNMVEWDAVVADECHSLKDRRSSTTKAMNAINALCRI 375
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
GLTGT +QN+ EL+ L +W PG GT +R PL GQ A + +A +
Sbjct: 376 GLTGTAIQNRYEELWTLLNWTNPGRFGTFAEWRTTICRPLALGQSHNATIHELSVARKTA 435
Query: 360 QHLV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ LV +L Y LRR K I + K D VVFC M+DLQK+AY ++ ++ +
Sbjct: 436 KRLVHNLLPDYFLRRMKS-LIADQLPKKTDKVVFCPMTDLQKQAYSNFIKSEQVVLIQGA 494
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ PCSCGS T CC LD + + LV P ++ LQ++++HL L+ P P E
Sbjct: 495 NDPCSCGSGKTNGRCCHV--GLDDGRTW-YSLVFPSIITLQKLASHLTLLIP-PSGEQGT 550
Query: 479 QRKDAELASAVFGPD-IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ ++A PD D + +S + LS+ + CGK + L KL+ W GDK+L+
Sbjct: 551 KLENAMDTLRTCLPDRCDEL--YRTRDSPMTLSNPEFCGKWKVLNKLLGFWHHNGDKVLV 608
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L IL R YS S LDGS RQ VDDFNS P+ VFLIST+AGG+G
Sbjct: 609 FSHSVRLLKILRSLFNRTAYSVSYLDGSLGYEERQQAVDDFNSDPNAFVFLISTKAGGVG 668
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VVIFDP+WNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 669 LNITSANKVVIFDPHWNPAYDLQAQDRAYRIGQSRDVDVFRLISAGTIEEIVYARQIYKQ 728
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ KE +GELFG+ N+F +D + EI+
Sbjct: 729 QQANIGYNASTERRYFKGVQQDKERKGELFGLQNIFSFRADEVVLREIV 777
>gi|429853543|gb|ELA28613.1| DNA excision repair protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 1026
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/730 (36%), Positives = 403/730 (55%), Gaps = 50/730 (6%)
Query: 106 QFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD + +P KD E Y +PASI L ++Q GVKFL++L+ + GGILGDD
Sbjct: 153 KFDESSKIKPCRPYKDIELEYSAGVIPASIAQYLRDYQIVGVKFLHRLFVYQRGGILGDD 212
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q +FL A FGK DE + K + Y VLIICP S+I+NW+IE +
Sbjct: 213 MGLGKTVQVASFLTAAFGKTADERDWKRLRKMRDEAGRWYPRVLIICPGSIIENWKIELN 272
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW + V ++HGP ++ L + +E++IT++ +Y+ H S ++ V W+ V+ DE H++
Sbjct: 273 RWGWWKVGVFHGPGKEDTLASARSGRIEIMITTYTTYKNHQSYVNTVKWDAVVADECHQI 332
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K S++ A ++ RIGLTGT +QNK EL+ L +W PG GT + +PL
Sbjct: 333 KERSSEITKAMNDVNALCRIGLTGTAIQNKYEELWTLLNWTNPGHFGTLSEWNNTITKPL 392
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
K GQ A ++ A + LV +L + LRR K I H + K D VVFC +++
Sbjct: 393 KTGQSHDATLIQLKNARLTARKLVNNLLPGFFLRRMKT-LIAHQLPKKTDRVVFCPLTES 451
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVK 457
Q+ AY+ L P+++ L PC+CGS Q CCK+ D P+ ++ PC+V
Sbjct: 452 QQEAYKNFLSRPDVELLRTLSNPCACGSGKGQGWCCKKTTE----DGTPWQSIIFPCVVT 507
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
Q++ NHL L+ P + DK +++ PD ++ + L++ + CGK
Sbjct: 508 SQKLVNHLTLLVPQGTETDDKHKREMRTLRHCC-PDT-WKSLYENRDAIMYLANPEFCGK 565
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L+KL+ W GDK+L+FS+SVR+L IL+ YS + LDG RQ VD+
Sbjct: 566 WKVLKKLLRFWHEAGDKVLVFSHSVRLLRILQHLFHNTSYSVTYLDGGISYEDRQKAVDN 625
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FNS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VF
Sbjct: 626 FNSDPTQFVFLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQVRDVDVF 685
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLS 697
RL+S+G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ + +GE+FG+ NLF
Sbjct: 686 RLVSSGTIEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDTDRKGEIFGLENLFTYRE 745
Query: 698 DNLFTSEIIE------------------------SHEEQGQ--QQERHHCTNQGFKGLET 731
+ L +I+ E+ G +QE + G L
Sbjct: 746 NQLVIRDIVNKTNIAEARVGNDIAMTTVDMENLVKEEDLGGAVKQEPADAEDAGMSQLAA 805
Query: 732 HIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK---QPGFQR 788
++++K+ L T + SD A +L G+ Y H N +++ + R
Sbjct: 806 -VLAAKNQKDYLGTVKSQQPKSDAVQA-----ILSAAGVEYTHENSEVIGTSKVEEQLSR 859
Query: 789 KKEESIPQDL 798
K E + D+
Sbjct: 860 KAEMAASSDV 869
>gi|367038853|ref|XP_003649807.1| hypothetical protein THITE_2108788 [Thielavia terrestris NRRL 8126]
gi|346997068|gb|AEO63471.1| hypothetical protein THITE_2108788 [Thielavia terrestris NRRL 8126]
Length = 1062
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/609 (41%), Positives = 367/609 (60%), Gaps = 15/609 (2%)
Query: 106 QFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD + P KD E Y +PA I L ++Q GVKFL++ + + G ILGDD
Sbjct: 151 KFDDSSGIRPCRPYKDIELEYSAGVIPAPIAQYLRDYQVAGVKFLHQRFVYQKGCILGDD 210
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL A FGK DE + K + + Y VLI+CP S+IQNW+ E +
Sbjct: 211 MGLGKTVQVAAFLTAAFGKTADERDAKRMRKMRRAGDQWYPRVLIVCPGSLIQNWKNELN 270
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++V +YHGP ++ +L+ ++ +E+++T++ +Y+ ++EV W+ V+ DE H L
Sbjct: 271 RWGWWHVDVYHGPGKEDVLQAAKSGRLEIMVTTYVTYKKMREAVNEVEWDCVVADECHVL 330
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ +S+ A + RIGLTGT +QNK EL+ L +W PG GT + + +PL
Sbjct: 331 KDRRSETTQAMDCVNALCRIGLTGTAIQNKYEELWTLLNWTNPGHFGTLAEWTQTITKPL 390
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + + IA + LV +L + LRR K I H + K D VVFC ++D+
Sbjct: 391 TVGQSHDATLKQLSIARTTAKKLVQNLLPDFFLRRVKT-LIAHQLPRKSDKVVFCPLTDI 449
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVK 457
Q+ AY+ L ++ + + PC C S + CC + D P+ +V P ++
Sbjct: 450 QRDAYQNFLDGAQVTWINSASEPCDCDSGRKRGWCCYQF----LPDGRPWKSVVFPTIMT 505
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
LQ+ISNHL L+ P+ D DK+ + + D + + N ES + L++ + CGK
Sbjct: 506 LQKISNHLTLLIPSAADPSDKRNSELKALQTCLPEDWEELYRN--RESLLNLANPEFCGK 563
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L KL+ W GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ +VDD
Sbjct: 564 WKILRKLLRFWHENGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGSLSYEDRQRVVDD 623
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FNS P++ VFLISTRAGG+GLN+ SAN+VVIFDP+WNP+ DLQAQDR++R GQ R V VF
Sbjct: 624 FNSDPAQFVFLISTRAGGVGLNITSANKVVIFDPHWNPSYDLQAQDRAYRIGQVRDVDVF 683
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLS 697
RL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ +GE+FG+ NLF +
Sbjct: 684 RLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKGVQRDSNRKGEIFGLSNLFTFHA 743
Query: 698 DNLFTSEII 706
D + +I+
Sbjct: 744 DQVVLRDIV 752
>gi|116197901|ref|XP_001224762.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51]
gi|88178385|gb|EAQ85853.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51]
Length = 1129
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/600 (42%), Positives = 360/600 (60%), Gaps = 15/600 (2%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P+E + L EY +PASI L ++Q GVKFL++ + + G ILGDDMGLGKT+Q
Sbjct: 175 PYEDIEL----EYSAGVIPASIAQYLRDYQIAGVKFLHERFVYQKGCILGDDMGLGKTVQ 230
Query: 172 TIAFLAAVFGKD--ESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVS 227
AFL A FGK E + K + + Y VLI+CP S+IQNW+ E RW ++V
Sbjct: 231 VAAFLTAAFGKTAGERDAKLMRKMRRAGDQWYPRVLIVCPGSLIQNWKNELHRWGYWHVD 290
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
YHG ++ +L+ +A +E++IT++ +Y+ ++EV W+ V+ DE H LK+ +S+
Sbjct: 291 TYHGAGKEDVLQAAKAGRLEIMITTYTTYKKMREAVNEVEWDCVVADECHVLKDRRSETT 350
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A + RIGLTGT +QNK EL+ L +W PG GTR + +PL GQ A
Sbjct: 351 QAMDCVNALCRIGLTGTAIQNKYEELWTLLNWTNPGHFGTRAEWGNTITKPLTVGQSHDA 410
Query: 348 PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ + IA + LV +L ++ LRR K I H + K D VVFC ++D+Q+ AY+
Sbjct: 411 TLKQLSIARTTAKKLVQNLLPEFFLRRMKT-LIAHQLPRKSDKVVFCPLTDIQREAYQNF 469
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L+ + + + PC CGS CC + L S +V P ++ LQ+ISNH+
Sbjct: 470 LEGEHVTFVNSASEPCDCGSGRKSGWCCNK--TLPDGKSW-MNVVFPSIMTLQKISNHIT 526
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ P+ D DKQ + D + N +S + L++ + CGK + L+KL+
Sbjct: 527 LLIPSSADPNDKQNSELNALQTCIPDDWKELYRN--RDSMLNLANSEFCGKWKILKKLLR 584
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W GDK+L+FS+SVR+L IL+ Y+ S LDG+ RQ +VDDFNS PS+ V
Sbjct: 585 FWHENGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGTLSYEERQKVVDDFNSDPSQFV 644
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FLIST+AGG+GLN+ SAN+VVIFDP+WNPA DLQAQDR++R GQ R V VFRL+SAG++E
Sbjct: 645 FLISTKAGGVGLNITSANKVVIFDPHWNPAYDLQAQDRAYRIGQVRDVDVFRLVSAGTIE 704
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
E+VY RQ+YKQQ +NI + E+RYF+GVQ +GE+FG+ NLF D + EI+
Sbjct: 705 EIVYARQIYKQQQANIGYNASNERRYFKGVQQDSTRKGEIFGLSNLFSFHGDQVVLREIV 764
>gi|346325999|gb|EGX95595.1| DNA excision repair protein [Cordyceps militaris CM01]
Length = 1111
Score = 464 bits (1194), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/586 (43%), Positives = 358/586 (61%), Gaps = 18/586 (3%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSD 187
+PA I L ++Q EGVKFL++ + + GGILGDDMGLGKT+Q +AFL A FGK + D
Sbjct: 172 IPAPIAQYLRDYQIEGVKFLHRKFVYQEGGILGDDMGLGKTVQVVAFLTAAFGKTGDERD 231
Query: 188 STILKDNK--VDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
L+ + + Y +LIICP S++ NW+ E RW + IYHGPN+D +L + A
Sbjct: 232 KRRLRQMRWYSTDRWYPRILIICPGSLLVNWKNELDRWGWWQAEIYHGPNKDDVLGTMRA 291
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
E++IT++D+Y+ S ++ V W+ VI DE H+LK +S+ A E+ RIGLTG
Sbjct: 292 GMSEIMITTYDTYKNSRSAVNMVQWDAVIADECHKLKGHRSETTKAMNEINALCRIGLTG 351
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QNK EL+ L DW PG+ GTR + + +PL GQ A + +A + Q LV
Sbjct: 352 TAIQNKYEELWTLLDWTNPGNFGTRTEWSQTISKPLTVGQSHEATLAQLSLARQTAQKLV 411
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
VL +Y LRR K I + K D VVFC ++DLQK+AY L+ ++ + N PC
Sbjct: 412 KNVLPRYFLRRMKS-LIADQLPKKTDRVVFCPLTDLQKQAYDNFLESDDVSVIRNISEPC 470
Query: 423 SCGSPLTQVECCKR-LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
L CC+R + N S V P ++ LQ++SNH+ L+ P+ D KQ
Sbjct: 471 PHDKKLGW--CCRRYISNGRTWQSA----VFPSMMSLQKLSNHMTLLVPSATDLDVKQ-- 522
Query: 482 DAELAS-AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
++EL + V PD AQ + L + + CGK + ++KL+ W S GDK+L+FS+
Sbjct: 523 NSELHTLQVCVPD-KWQSLYAQRDQIGNLVNPEFCGKWKVMKKLLKFWHSNGDKVLVFSH 581
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
SVR+L IL+ Y+ S LDGS RQ +VD FNS P++ VFLISTRAGG+GLN+
Sbjct: 582 SVRLLRILQHLFTNTSYTVSYLDGSLSYEQRQEVVDTFNSDPTQFVFLISTRAGGVGLNI 641
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFRL+S G++EE+VY RQVYKQQ +
Sbjct: 642 TSANKVVIVDPHWNPSFDLQAQDRAYRIGQVRDVEVFRLISLGTVEEIVYARQVYKQQQA 701
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
NI + E+RYF GVQ + +GE+FG+ N+F SD+ +I+
Sbjct: 702 NIGYTASSERRYFRGVQQDADRKGEIFGLSNIFTFHSDSGLLRDIV 747
>gi|406861398|gb|EKD14452.1| hypothetical protein MBM_07173 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1056
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/686 (37%), Positives = 390/686 (56%), Gaps = 49/686 (7%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PASI L ++Q GV FL++L+ + GGILGDDMGLGKT+Q AFL FGK DE
Sbjct: 219 IPASIAQYLRDYQVTGVGFLHELFVYQKGGILGDDMGLGKTVQVAAFLTVAFGKTGDERD 278
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
+ K + K + LI+CP S+++NW+ E +RW ++ I+HG + + E
Sbjct: 279 AKRMRKMRRSPCKPWYPRALIVCPGSLMENWKNELTRWGWWHADIFHGSVAAKKAVHEAA 338
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
++ +EV+IT++++YR H L+++ W++V+ DE H+LK S A ++ RIGL
Sbjct: 339 KSGRLEVVITTYNTYRNHMDELNQIKWDVVVADECHQLKEPSSATTQAMDQINALCRIGL 398
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR----IADE 357
TGT +QNK E + L +W PG G ++ +PL+ GQ A ++ IA++
Sbjct: 399 TGTAIQNKYEEFWTLLNWTNPGKFGPLSTWKTSISDPLRIGQSHDATNHQLKQGRQIAEK 458
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ +L L ++ LRR K I H + K D VVFC +++LQK AY R L + +
Sbjct: 459 LRDNL---LPQFFLRRMKS-LIAHQLPKKTDKVVFCPLTNLQKEAYERFLDSEVVDIVRT 514
Query: 418 KDLPCSCG-SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
C CG + + CC L G ++ +V P + +LQ++SNHL ++ PN +D P
Sbjct: 515 SSEDCDCGETGKKRGWCC--FSTLPGTNTTWKAMVFPIINQLQKLSNHLAILLPNDKDPP 572
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
+K+ +D ++ + D + N N LS+ + CGK L+KL+ W +GDK+L
Sbjct: 573 EKRNRDLDMLRDMLPDHWDTLYANRGN--LATLSNPEFCGKWVILKKLLKHWHEQGDKVL 630
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
+FS+SV++L +L+ YS S L+GS P++ RQ VDDFN+ P++ VFLIST+AGG+
Sbjct: 631 IFSHSVKLLRMLQHLFNNTAYSVSFLNGSMPNDQRQKTVDDFNTDPNQFVFLISTKAGGV 690
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLN+ SAN+VVIFDPNWNP+ DLQAQDR++R GQ R V V+RL+SAG++EE+VY RQ+YK
Sbjct: 691 GLNITSANKVVIFDPNWNPSYDLQAQDRAYRIGQLRDVEVYRLVSAGTVEEIVYARQIYK 750
Query: 657 QQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII---------- 706
QQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF +DN+ +I+
Sbjct: 751 QQQANIGYTASTERRYFKGVQNNKDQKGEIFGLDNLFAYHADNIVLRDIVNKTNVAEAKK 810
Query: 707 -------ESHEEQGQQQERHHCTNQ-----GFKGLETHIVSSKDSNTLLSTGSKTRKSSD 754
+ + C N L + D T +K+R +D
Sbjct: 811 GIDILDFNAEDAANDDDNPLRCDNDDDPDAAMSQLAALLTEGDDLTT--RKNAKSRAKAD 868
Query: 755 PEMARTSKPLLEDMGIVYAHRNDDIV 780
P A +L G+ Y H N ++V
Sbjct: 869 PIQA-----ILASAGVEYTHENSEVV 889
>gi|367025841|ref|XP_003662205.1| hypothetical protein MYCTH_2302542 [Myceliophthora thermophila ATCC
42464]
gi|347009473|gb|AEO56960.1| hypothetical protein MYCTH_2302542 [Myceliophthora thermophila ATCC
42464]
Length = 1129
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/712 (37%), Positives = 395/712 (55%), Gaps = 54/712 (7%)
Query: 106 QFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD + P KD E Y +PA I L ++Q GV+FL++ + + G ILGDD
Sbjct: 158 KFDESSGIRPCRPYKDIELEYSAGIIPAPIAQYLRDYQIAGVQFLHQRFVYQRGCILGDD 217
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFLA FGK DE + K + + Y V+I+CP S++QNW E +
Sbjct: 218 MGLGKTVQVAAFLAVAFGKTADERDARRMRKVRRAGDQWYPRVMIVCPGSLMQNWRNELN 277
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++V YHGP ++ +L+ +A +E++IT++ +Y+ ++EV W+ V+ DE H L
Sbjct: 278 RWGYWHVDTYHGPGKEDVLQAAKAGRIEIMITTYVTYKKMREAVNEVEWDCVVADECHVL 337
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ +S+ A + RIGLTGT +QNK EL+ L +W PG GT + +PL
Sbjct: 338 KDRRSETTQAMDCVNALCRIGLTGTAIQNKYEELWTLLNWTNPGRFGTLSEWHNTITKPL 397
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + + IA + LV +L + LRR K I + K D VVFC ++D+
Sbjct: 398 TVGQSHDATLKQLSIARTTAKKLVQNLLPDFFLRRMKT-LIADQLPRKTDKVVFCPLTDI 456
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP-----FCLVLP 453
Q+ AY+ L +I +I+ PC CGS + CC + P +V P
Sbjct: 457 QRDAYQNFLDGSQIPFIISASEPCDCGSKRKRGWCC--------YSTLPDGRRWVSVVFP 508
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
++ LQ+ISNH+ L+ P+ D +KQ + + D + N +S + L++ +
Sbjct: 509 SILTLQKISNHITLLIPSSTDPSEKQSSELKALQICVPDGWDQLYRN--RDSMLNLANPE 566
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
CGK + L KL++ W GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ
Sbjct: 567 FCGKWKVLRKLLHFWHDNGDKVLVFSHSVRLLRILQDLFHNTSYNVSFLDGSLSYEERQR 626
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VDDFNS P++ VFLISTRAGG+GLN+ SAN+VVIFDP+WNP+ DLQAQDR++R GQ R
Sbjct: 627 VVDDFNSDPAQFVFLISTRAGGVGLNITSANKVVIFDPHWNPSYDLQAQDRAYRIGQIRD 686
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ +GE+FG+ NLF
Sbjct: 687 VDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASSERRYFKGVQQDSTRKGEIFGLKNLF 746
Query: 694 RDLSDNLFTSEII-------------------------ESHEEQGQQQERHHCTNQGFKG 728
+D + EI+ E E +QE G
Sbjct: 747 SFHADQVVLREIVNKTNIAEAKAGVYLADIDLDKMARDEDEELNYIKQEPADDEEAGMSQ 806
Query: 729 LETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
L +++++D LL + RK++ P + +L G+ Y H N +++
Sbjct: 807 L-AKLITAEDQEELL----RARKAARPRTDAIAG-ILASAGVEYTHENSEVI 852
>gi|380485451|emb|CCF39353.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1061
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/600 (42%), Positives = 362/600 (60%), Gaps = 14/600 (2%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P+E + L EY +PASI L E+Q GVKFL++L+ + GGILGDDMGLGKT+Q
Sbjct: 174 PYEEVEL----EYSAGIIPASIAQYLREYQIVGVKFLHRLFVYQRGGILGDDMGLGKTVQ 229
Query: 172 TIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVS 227
FL A FGK DE + K V + Y +LIICP S+I+NW+ E +RW + V
Sbjct: 230 VATFLTAAFGKTADERDRKRLKKIRDVSGRWYPRILIICPGSIIENWKNELNRWGWWKVD 289
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
++HG ++ +L +A E++IT++ +Y+ H S+++ V W+ VI DE H++K S+
Sbjct: 290 VFHGAGKEDVLSTAKAGRTEIMITTYTTYKNHKSLVNTVKWDAVIADECHQMKERSSETA 349
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A ++ RIGLTGT +QNK EL+ L +W PG GT + +PL GQ A
Sbjct: 350 KAMNDVNALCRIGLTGTAIQNKYEELWTLLNWTNPGHFGTLGEWNNTITKPLTRGQSHDA 409
Query: 348 PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+R A + LV +L + LRR K I H + K D VVFC +++ Q+ AY+
Sbjct: 410 TLNQLRDARVTARKLVTNLLPGFFLRRMKT-LIAHQLPKKSDRVVFCPLTEQQQEAYKNF 468
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ P+++ L PC CGS + Q CC++ LD S ++ PC+ LQ++SNHL
Sbjct: 469 INRPDVELLRTLSNPCECGSGVGQGWCCRK--TLDDGTSWQ-SIIFPCVTTLQKLSNHLT 525
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ P E D+++K P+ A ++ + L++ + CGK + L+KL+
Sbjct: 526 LLIPAGGGEQDEKQKREMRTLQTCCPE-SWHQLYANRDAIMNLANPEFCGKWKVLKKLLK 584
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W GDK+L+FS+SVR+L IL+ YS + LDGS RQ VDDFNS P++ V
Sbjct: 585 FWHDSGDKVLVFSHSVRLLRILQHLFHNTSYSVTYLDGSVTYEDRQKAVDDFNSDPTQFV 644
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFRL+S G++E
Sbjct: 645 FLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQVRDVDVFRLVSTGTIE 704
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
E+VY RQ+YKQQ +NI + E+RYF+GVQ E +GE+FG+ NLF + L +I+
Sbjct: 705 EIVYGRQIYKQQQANIGYTASSERRYFKGVQQDSERKGEIFGLENLFTYRENQLVIRDIV 764
>gi|154302623|ref|XP_001551721.1| hypothetical protein BC1G_09888 [Botryotinia fuckeliana B05.10]
Length = 1025
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/587 (41%), Positives = 357/587 (60%), Gaps = 13/587 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PASI L ++Q +GVKFL++ + + GGILGDDMGLGKT+Q AFL A FGK DE
Sbjct: 222 IPASIAQYLRDYQVDGVKFLHEKFVYQKGGILGDDMGLGKTVQVAAFLTAAFGKTGDERD 281
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
+ K D+ + VLI+CP S+IQNW+ E +RW ++V +HG ++ +L
Sbjct: 282 GKRMRKVKNADETRWYPRVLIVCPGSLIQNWKNELTRWGWWHVEKFHGDVKEKEFVLRSA 341
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
++ VE++IT++ +Y+ H L+ ++W+ V+ DE H+LK S A E+ RIGL
Sbjct: 342 QSGRVEIVITTYATYKNHKDALNTISWDCVVADECHQLKERTSLTTQAMNEINALCRIGL 401
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QNK EL+ L +W +PG +G + EPL+ GQ + + ++ A E +
Sbjct: 402 TGTAIQNKYEELWTLLNWCSPGKVGPLATWVSTISEPLRIGQSHDSTNQQVKRARETAKR 461
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
LV L + R + I H + K D ++ C ++DLQ+ AY R L+ +Q + N P
Sbjct: 462 LVNNLMPHFFLRRMKTLIAHQLPRKTDRLLPCPLTDLQREAYERFLESDVVQFVRNHGEP 521
Query: 422 CSCGS--PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CG+ LT+ CC + G ++ +V P + LQ++SNHL L+ PN D +KQ
Sbjct: 522 CDCGNGKKLTRGGCC--YSKIPGTNTKWQAMVFPIMTTLQKLSNHLALLLPNDGDPREKQ 579
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+D E + PD A++ S LS+ + CGK + L KL+ W +GDK+L+FS
Sbjct: 580 ERDLEFLQLML-PDRWEELYKARD-SIANLSNPEFCGKWKVLRKLLKHWHEEGDKVLIFS 637
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
+SV++L +L+ Y+ S L G RQ VDDFNS P++ +FLIST+AGG+GLN
Sbjct: 638 HSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNSDPNQFIFLISTKAGGVGLN 697
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
+ SAN+VVIFDPNWNP+ DLQAQDR++R GQ R V FRL+SAG++EE+VY RQ+YKQQ
Sbjct: 698 ITSANKVVIFDPNWNPSYDLQAQDRAYRIGQHRDVDSFRLVSAGTIEEVVYARQIYKQQQ 757
Query: 660 SNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+NI + E+RYF+GVQ+ +GE+FG+ NL +D + +I+
Sbjct: 758 ANIGYNASKERRYFKGVQNAASQKGEIFGLDNLLSFHADEILLRDIV 804
>gi|171694309|ref|XP_001912079.1| hypothetical protein [Podospora anserina S mat+]
gi|170947103|emb|CAP73908.1| unnamed protein product [Podospora anserina S mat+]
Length = 1203
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 265/707 (37%), Positives = 392/707 (55%), Gaps = 45/707 (6%)
Query: 106 QFDHTGPFEPLVLSK--DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
QFD +P K + EY +PASI L ++Q EGV+FL++ + + G ILGDD
Sbjct: 328 QFDERSGIKPCRPKKQIELEYSAGIIPASIAQYLRDYQVEGVRFLHQRFIYQKGCILGDD 387
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL A FGK DE + K + Y VLI+CP S+IQNW+ E +
Sbjct: 388 MGLGKTVQVAAFLTAAFGKTGDERDAKRMRKMRRAGGCWYPRVLIVCPGSLIQNWKNELN 447
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW +++ ++HG ++ +L +A +EV+IT++ +Y+ + ++ ++W+ V+ DE H+L
Sbjct: 448 RWGWWHIDLFHGVGKEDVLGAAKAGRLEVMITTYMTYKNNCDAVNAIDWDCVVADECHQL 507
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ +S+ A + RIGLTGT +QNK EL+ L +W PG GT + +PL
Sbjct: 508 KDRRSETTRAMGRVNAMCRIGLTGTAIQNKYEELWTLLNWTNPGRFGTLAEWTTTITKPL 567
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + + +A + LV +L Y LRR K I + K D VVFC ++D+
Sbjct: 568 TVGQSHEATLKQLSLARTTAKKLVHNLLPDYFLRRIKT-LIADQLPKKSDKVVFCPLTDI 626
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVK 457
Q AY+ + ++Q +I PC C S Q CC ++ D P+ L PCL
Sbjct: 627 QSHAYQNFIDGDQVQYIICASEPCPCASGRKQGWCCYKILE----DGRPWKSLTFPCLTT 682
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
LQ+I+NHL L+ P+ D DKQ + + + + +S + L++ + CGK
Sbjct: 683 LQKIANHLTLLLPSSADPNDKQSTELSTLRTCIPDGWEKLW--QERDSMLSLANPEFCGK 740
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L+KL+ W S GDK+L+FS+SVR+L IL Y+ S LDGS RQ++VD+
Sbjct: 741 WKVLKKLLQFWHSNGDKVLVFSHSVRLLRILRHLFNNTNYNVSFLDGSLSYEERQNVVDE 800
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FN+ P++ VFLIST+AGG+GLN+ SAN+VVIFDP+WNPA DLQAQDR++R GQ R V VF
Sbjct: 801 FNTDPAQFVFLISTKAGGVGLNITSANKVVIFDPHWNPAYDLQAQDRAYRIGQIRDVDVF 860
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLS 697
RL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ +GE+FG+ NL
Sbjct: 861 RLISAGTIEEIVYARQIYKQQQANIGYNASNERRYFKGVQKDSTRKGEIFGLGNLLSYHP 920
Query: 698 DNLFTSEII------------------------ESHEEQGQQQERHHCTNQGFKGLETHI 733
D + EI+ + +E ++ G L I
Sbjct: 921 DQVVLREIVNKTNVAEAKAGVLLSDIDLEKLAKDKDDEINLVKQEDDSDETGMSQLAKLI 980
Query: 734 VSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
+ L K+RK+ P+ + +L G+ Y H N ++V
Sbjct: 981 TIENKEDML-----KSRKTQKPQ-SDAVAAILASAGVEYTHENSEVV 1021
>gi|340914879|gb|EGS18220.1| helicase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 1066
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/614 (42%), Positives = 363/614 (59%), Gaps = 24/614 (3%)
Query: 106 QFDHTG------PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGI 159
+FD T P+E + L EY +PA I L ++Q GVKFL++ + + G I
Sbjct: 149 RFDETSGIKLCRPYEDIEL----EYSGGIIPAPIAQYLRDYQIAGVKFLHQRFVYQKGCI 204
Query: 160 LGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNW 214
LGDDMGLGKT+Q +AFLAA FGK DE + K + + VLI+CP S+I+NW
Sbjct: 205 LGDDMGLGKTVQVVAFLAAAFGKTGDERDTKRMRKMRRAAGDLWYPRVLIVCPGSLIRNW 264
Query: 215 EIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
E SRW ++ IYHG +D +L +A +E++IT++ +Y+ ++ V W+ V+ D
Sbjct: 265 YNELSRWGWWHADIYHGSGKDDVLAAAKAGRLEIMITTYTTYKNMHQAVNTVEWDCVVAD 324
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H LK+ KS+ + + RIGLTGT +QNK EL+ L +W PG GTR +
Sbjct: 325 ECHVLKDLKSETTQSMNCVNALCRIGLTGTAIQNKYEELWTLLNWTNPGKFGTRADWDHA 384
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+PLK GQ A + + +A + LV +L + LRR K I + K D VVFC
Sbjct: 385 ISKPLKVGQSHDATLKELSLARSTAKKLVYNLLPDFFLRRMKT-LIADQLPKKTDKVVFC 443
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC-KRLDNLDGCDSCPFCLVL 452
++ LQ+ AY L +I+ +I+ PC CGS CC K L + S +V
Sbjct: 444 PLTTLQREAYENFLDSEQIEYIISASDPCDCGSGRKSGWCCHKTLPDGRSWRS----VVF 499
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
P +V LQ+I+NHL L+ P D DKQ + ELA+ +S + L++
Sbjct: 500 PSIVTLQKIANHLTLLVPTTGDPRDKQ--ETELANLRTCLPEGWEEMYRNRDSMVNLANP 557
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
+ CGK + L KL+ W GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ
Sbjct: 558 EFCGKWKVLRKLLRFWHENGDKVLVFSHSVRLLRILQCLFQNTSYNVSFLDGSLSYEDRQ 617
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
VDDFNS P + VFLIST+AGG+GLN+ SAN+VVIFDP+WNP+ DLQAQDR++R GQ R
Sbjct: 618 KAVDDFNSDPQQFVFLISTKAGGMGLNITSANKVVIFDPHWNPSHDLQAQDRAYRIGQSR 677
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNL 692
V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K +GE+FG+ NL
Sbjct: 678 DVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEDKHRRGEIFGLHNL 737
Query: 693 FRDLSDNLFTSEII 706
F +D + +I+
Sbjct: 738 FSFHADQVVLRDIV 751
>gi|310796849|gb|EFQ32310.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1069
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/728 (36%), Positives = 403/728 (55%), Gaps = 45/728 (6%)
Query: 107 FDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDM 164
FD + +P +D E Y +PA I L ++Q GVKFL++L+ + GG+LGDDM
Sbjct: 154 FDESTKIKPCRPYQDVELEYSAGIIPAPIAQYLRDYQIVGVKFLHRLFVYQRGGVLGDDM 213
Query: 165 GLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSR 220
GLGKT+Q + FL A FGK DE + K + + Y +LIICP S+I+NW+ E +R
Sbjct: 214 GLGKTVQVVTFLTAAFGKTADERDRKRLKKIRDISGRWYPRILIICPGSIIENWKNELNR 273
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W + V ++HG ++ +L +A E++IT++ +Y+ H S+++ V W+ VI DE H++K
Sbjct: 274 WGWWKVDVFHGAGKEDVLSTAKAGRTEIMITTYTTYKNHKSLVNTVKWDAVIADECHQMK 333
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
S++ A ++ RIGLTGT +QNK EL+ L +W PG GT + +PL
Sbjct: 334 ERSSEVTKAMNDINALCRIGLTGTAIQNKYEELWTLLNWTNPGHFGTLSEWNNTITKPLT 393
Query: 341 HGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
GQ A +R A + LV +L + LRR K I H + K D VVFC ++D Q
Sbjct: 394 RGQSHDATLGQLRDARITARKLVTNLLPGFFLRRMKT-LIAHQLPKKSDRVVFCPLTDQQ 452
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ AY+ + P+++ L PC CGS Q CC++ L+ S ++ PC+ LQ
Sbjct: 453 REAYKNFISRPDVELLRTLSDPCECGSGTGQGWCCRK--TLEDGTSWQ-SIIFPCVTTLQ 509
Query: 460 QISNHLELIKP-NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
++SNHL L+ P D+ DK +++ + N ++ + L++ + CGK
Sbjct: 510 KLSNHLTLLIPAGGGDQDDKYKREIRALQTCCPETWQYLYQN--RDAILNLANPEFCGKW 567
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+KL+ W GDK+L+FS+SVR+L IL+ YS + LDGS RQ VDDF
Sbjct: 568 KVLKKLLKFWHDSGDKVLVFSHSVRLLRILQHLFHNTSYSVTYLDGSVSYEDRQKAVDDF 627
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 628 NSDPTQFVFLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQVRDVDVFR 687
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L+S G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ E +GE+FG+ NLF +
Sbjct: 688 LVSTGTIEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDSERKGEIFGLENLFTYREN 747
Query: 699 NLFTSEIIESHE-----------------EQGQQQERHHCTNQGFKGLETHIVSSKDSNT 741
L +I+ E+ ++E H L+ S+D +
Sbjct: 748 QLVIRDIVNKTNIAEAKAGTGIAMTTVDMEKLAKEEEHEGE---LGALKRDPAGSEDGDM 804
Query: 742 ------LLSTGSKTRKSSDPEMARTS--KPLLEDMGIVYAHRNDDIVNK---QPGFQRKK 790
L +K S+ + A++ + +L G+ Y H N +++ + RK
Sbjct: 805 SQLAAFLAGKNTKAGDSAKTQQAKSDAVQAILSAAGVEYTHENSEVIGTSKVEEQLSRKA 864
Query: 791 EESIPQDL 798
E + D+
Sbjct: 865 EMAASSDV 872
>gi|440640822|gb|ELR10741.1| hypothetical protein GMDG_04999 [Geomyces destructans 20631-21]
Length = 1144
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/599 (42%), Positives = 361/599 (60%), Gaps = 22/599 (3%)
Query: 123 EYPIIQ-------VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
EY IQ +PA I+ L ++Q +GV FL++++ + GGILGDDMGLGKT+Q AF
Sbjct: 195 EYKDIQLPQSSGIIPAPISQYLRDYQVQGVAFLHEIFVYQKGGILGDDMGLGKTVQVAAF 254
Query: 176 LAAVFGK--DESSDSTILKDNK-VDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
LAA FGK DE + K + +D++ Y VLI+CP ++I+NW+ E RW ++V YH
Sbjct: 255 LAAAFGKTGDERDFKRMRKMRRAMDRRWYPRVLIVCPGTLIENWKQELGRWGYWHVDSYH 314
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G ++ + +A +E+LIT++ +Y+++ S L+ + W+ V+ DE H LK S+ A
Sbjct: 315 GSGKEDAFQAAKAGRLEILITTYTTYKMNKSQLNLIEWDCVVADECHILKERTSETTQAM 374
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
E+ RIGLTGT +QNK EL+ L +W PG G ++ PL GQ A +
Sbjct: 375 NEVNALCRIGLTGTAIQNKYEELWTLLNWTNPGRFGPLSTWKSSICLPLAVGQSHDASIQ 434
Query: 351 FIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+ IA + + LV +L ++ LRR K I H + K D VVFC ++ Q+ AY R L
Sbjct: 435 QLSIARKTAKKLVENLLPQFFLRRMKS-LIAHQLPKKSDRVVFCPLTTAQRDAYERFLDG 493
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
+ + PC C S + CC L G LV P + LQ++SNHL L+
Sbjct: 494 DFVDLVKRSADPCECMSGKKRGWCCHA--TLPGSGIKWQALVFPVIATLQKLSNHLALLI 551
Query: 470 PNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
P+ D +KQ +D + + PD DL +S LS+ + CGK R L++L+
Sbjct: 552 PSSTDPQEKQTRDLDFLQTMV-PDRWEDLYN---HRDSLFNLSNPEFCGKWRVLKRLLRF 607
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
W GDK+L+FS+SV++L +L+ Y+ S LDGS RQ +VDDFNS P + VF
Sbjct: 608 WHGNGDKVLVFSHSVKLLKMLQHLFHNTAYNVSFLDGSLGYEDRQRVVDDFNSDPRQFVF 667
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
LIST+AGG+GLN+ SAN+VVIFDPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE
Sbjct: 668 LISTKAGGVGLNIASANKVVIFDPNWNPSYDLQAQDRAYRIGQTRDVEVFRLISAGTVEE 727
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+VY RQ+YKQQ +NI + LE+RYF+GVQ+ K +GE+FG+ NL SD + +I+
Sbjct: 728 IVYARQIYKQQQANIGYNASLERRYFKGVQNQKGQKGEIFGLANLLAFHSDEVVLRDIV 786
>gi|347827474|emb|CCD43171.1| similar to DNA excision repair protein (Rad26L) [Botryotinia
fuckeliana]
Length = 1007
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/587 (41%), Positives = 357/587 (60%), Gaps = 13/587 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PASI L ++Q +GV+FL++ + + GGILGDDMGLGKT+Q AFL A FGK DE
Sbjct: 204 IPASIAQYLRDYQVDGVRFLHEKFVYQKGGILGDDMGLGKTVQVAAFLTAAFGKTGDERD 263
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
+ K D+ + VLI+CP S+IQNW+ E +RW ++V +HG ++ +L
Sbjct: 264 GKRMRKVKNADETRWYPRVLIVCPGSLIQNWKNELTRWGWWHVEKFHGDVKEKEFVLRSA 323
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
++ VE++IT++ +Y+ H L+ ++W+ V+ DE H+LK S A E+ RIGL
Sbjct: 324 QSGRVEIVITTYATYKNHKDALNTISWDCVVADECHQLKERTSLTTQAMNEINALCRIGL 383
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QNK EL+ L +W +PG +G + EPL+ GQ + + ++ A E +
Sbjct: 384 TGTAIQNKYEELWTLLNWCSPGKVGPLATWVSTISEPLRIGQSHDSTNQQVKRARETAKR 443
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
LV L + R + I H + K D ++ C ++DLQ+ AY R L+ +Q + N P
Sbjct: 444 LVNNLMPHFFLRRMKTLIAHQLPRKTDRLLPCPLTDLQREAYERFLESDVVQFVRNHGEP 503
Query: 422 CSCGS--PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CG+ LT+ CC + G ++ +V P + LQ++SNHL L+ PN D +KQ
Sbjct: 504 CDCGNGKKLTRGGCC--YSKIPGTNTKWQAMVFPIMTTLQKLSNHLALLLPNDGDPREKQ 561
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+D E + PD A++ S LS+ + CGK + L KL+ W +GDK+L+FS
Sbjct: 562 ERDLEFLQLML-PDRWEELYKARD-SIANLSNPEFCGKWKVLRKLLKHWHEEGDKVLIFS 619
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
+SV++L +L+ Y+ S L G RQ VDDFNS P++ +FLIST+AGG+GLN
Sbjct: 620 HSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNSDPNQFIFLISTKAGGVGLN 679
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
+ SAN+VVIFDPNWNP+ DLQAQDR++R GQ R V FRL+SAG++EE+VY RQ+YKQQ
Sbjct: 680 ITSANKVVIFDPNWNPSYDLQAQDRAYRIGQHRDVDSFRLVSAGTIEEVVYARQIYKQQQ 739
Query: 660 SNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+NI + E+RYF+GVQ+ +GE+FG+ NL +D + +I+
Sbjct: 740 ANIGYNASKERRYFKGVQNAASQKGEIFGLDNLLSFHADEILLRDIV 786
>gi|67526707|ref|XP_661415.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4]
gi|40740829|gb|EAA60019.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4]
gi|259481632|tpe|CBF75332.1| TPA: DNA excision repair protein (Rad26L), putative
(AFU_orthologue; AFUA_2G03750) [Aspergillus nidulans
FGSC A4]
Length = 1016
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/685 (37%), Positives = 377/685 (55%), Gaps = 47/685 (6%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PA I L +Q EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK DE
Sbjct: 237 IPAPIAQWLRPYQVEGAAFLHQLFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKTGDERD 296
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
D + K + + + LIICP ++I+NW+ E SRW ++ Y G N+D++L ++
Sbjct: 297 DKRMRKMRRSEGDLWYPRTLIICPGTLIENWKSEMSRWGWWHFDAYQGSNKDLVLHAAKS 356
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
VE+LIT++ +Y + ++ V+W+ VI DE H +K S+ A ++ RIGLTG
Sbjct: 357 GRVEILITTYSTYLKNRDAVNMVDWDCVIADECHAIKERSSETTKAMNDINALCRIGLTG 416
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN+ EL+ L +W PG +G ++ EPLK GQ A + +R A + LV
Sbjct: 417 TAIQNRYEELWTLLNWTNPGRMGPVTTWKSHVSEPLKIGQSHDATVQQLRRARVTAKKLV 476
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+L ++ LRR K I + K D VVFC ++D Q +AY RLL I + C
Sbjct: 477 ENLLPQFFLRRMKT-LIADQLPKKIDRVVFCPLTDTQAQAYERLLDSDIIHYIKTSTNKC 535
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPF-----CLVLPCLVKLQQISNHLELIKPNPRDEPD 477
CGS CC + P V P + LQ++SNHL ++ P D +
Sbjct: 536 DCGSGRKAGWCCHQY--------LPSGRRWQTYVFPAMQILQKLSNHLAILIPQSTDSFE 587
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ + + + +S I +D + CGK + L KL+ W GDK+L+
Sbjct: 588 KQEKDKEMLEIAVPDEWERL--YRTRDSIINYADAEYCGKWKVLRKLLKWWHGNGDKVLV 645
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDGS R +VD+FNS P + VFLISTRAGG+G
Sbjct: 646 FSHSVRLLKMLQMLFNHTSYNVSYLDGSMTYETRAKVVDEFNSDPRQFVFLISTRAGGVG 705
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VVI DPNWNP+ DLQAQDR++R GQ R+V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 706 LNITSANKVVIVDPNWNPSHDLQAQDRAYRIGQTRNVEVFRLISAGTIEEIVYARQIYKQ 765
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII----------- 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ N+F +DN+ +I+
Sbjct: 766 QQANIGYNASSERRYFKGVQEKKDQKGEIFGLQNIFEYQNDNIVLRDIVNKTNIAESKAG 825
Query: 707 -----------ESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDP 755
E+ E G ++ L I D + ++S+ P
Sbjct: 826 VQVMDIELELEEAGSEDGSWSRNPDDDDEAMSQLAARIRGETDDEVIF---PHRQQSTTP 882
Query: 756 EMARTSKPLLEDMGIVYAHRNDDIV 780
+ +L G+ Y H N+++V
Sbjct: 883 SKHDPIQAILAGAGVEYTHLNNEVV 907
>gi|400594647|gb|EJP62485.1| SNF2 superfamily RAD26-like protein [Beauveria bassiana ARSEF 2860]
Length = 1115
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/679 (39%), Positives = 390/679 (57%), Gaps = 39/679 (5%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PA I L ++Q EGVKFL++ + + G ILGDDMGLGKT+Q +AFL A FGK DE
Sbjct: 171 IPAPIAQYLRDYQIEGVKFLHRKFVYQEGCILGDDMGLGKTVQVVAFLTAAFGKTGDERD 230
Query: 187 DSTI--LKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
+ ++ VD+ +LIICP S++ NW+ E +RW + IYHGPN+D IL + A
Sbjct: 231 KRRLRQMRWYSVDRWYPRILIICPGSLLVNWKNELNRWGWWQAEIYHGPNKDDILGTMRA 290
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
E++IT++D+Y+ S ++ V W+ VI DE H+LK S+ A E+ RIGLTG
Sbjct: 291 GMSEIMITTYDTYKNSRSAVNMVQWDAVIADECHKLKGHNSETTKAMNEINALCRIGLTG 350
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QNK EL+ L DW PG+ GTR + + +PL GQ A + +A + Q LV
Sbjct: 351 TAIQNKYEELWALLDWTNPGNFGTRSEWSQTISKPLTVGQSHEATLAQLSLARQTAQKLV 410
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+L +Y LRR K I + K D VVFC ++DLQK+AY L ++ + +D+
Sbjct: 411 NNLLPRYFLRRMKS-LIADQLPKKTDRVVFCPLTDLQKQAYDNFLDSDDVSTI--RDISE 467
Query: 423 SCGSPLTQVECC-KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+C CC K L N S V P ++ LQ++SNHL L+ P+ D KQ
Sbjct: 468 TCEHEKKSGWCCGKYLSNGRTWQSA----VFPSMMSLQKLSNHLTLLVPSATDLDGKQ-- 521
Query: 482 DAELAS-AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
D+EL + + PD AQ + L + + CGK + ++KL+ W S GDK+L+FS+
Sbjct: 522 DSELNTLQICMPD-KWQSLYAQRDQIGNLVNPEFCGKWKVMKKLLKFWHSNGDKVLVFSH 580
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
SVR+L IL+ Y+ S LDG+ RQ +VD FNS P++ VFLISTRAGG+GLN+
Sbjct: 581 SVRLLRILQHLFTNTSYTVSYLDGTLSYEQRQEVVDTFNSDPTQFVFLISTRAGGVGLNI 640
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFRL+S G++EE+VY RQVYKQQ +
Sbjct: 641 TSANKVVIVDPHWNPSYDLQAQDRAYRIGQTRDVEVFRLISLGTVEEIVYARQVYKQQQA 700
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII-------------- 706
NI + E+RYF GVQ + +GE+FG+ N+F SD+ +I+
Sbjct: 701 NIGYTASSERRYFRGVQQDADRKGEIFGLTNIFTFHSDSGLLRDIVNKTNIAEAKVGVTL 760
Query: 707 -ESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKS----SDPEMARTS 761
E +Q + + + +G + + V + LL+ ++T K + P +
Sbjct: 761 AEVDMDQAAKNDNDLVPIKAEQGDDDNGVGQLAA--LLTAENQTPKQDGRIATPRRSDAV 818
Query: 762 KPLLEDMGIVYAHRNDDIV 780
+ +L G+ Y H N ++V
Sbjct: 819 QAILASAGVEYTHDNAEVV 837
>gi|340376805|ref|XP_003386922.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Amphimedon queenslandica]
Length = 623
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/621 (40%), Positives = 368/621 (59%), Gaps = 9/621 (1%)
Query: 104 QFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
QF +P VLS P I VPA IN L E+QR+G+KFLY Y GG+L DD
Sbjct: 10 QFAHSSISLRKPYVLSTPEIVPSICVPAPINQYLREYQRDGIKFLYSQYSKGVGGLLCDD 69
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNK-VDKKGYVLIICPSSVIQNWEIEFSRWS 222
MGLGKT+Q IAF+ A+ K + L K V K VL+ICP SVI NW E WS
Sbjct: 70 MGLGKTVQVIAFICAILCKTCTKIDVFLTGPKLVVSKSAVLVICPCSVIYNWVSEIETWS 129
Query: 223 TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNE 282
+YH +D IL+K+ ++V++T+ ++ ++ L+ + W V VDE H LKN
Sbjct: 130 HLKTGVYHRNKKDEILDKVSRGRLDVVLTTLETAKLKVEELNSIPWLAVFVDEVHALKNP 189
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
KS++ A L+LK + R GLTGT +QN++ EL+ + +W+ PG LG F+ Y+ PL G
Sbjct: 190 KSQVTEALLQLKCQIRFGLTGTALQNRLSELWCILNWIHPGCLGAWHEFQFIYERPLLQG 249
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRA 402
Q+ R + A E++Q L +L +++RRTKE I + KE+ VVFC ++ LQ
Sbjct: 250 QKFDCTRRELATAKEKQQQLSQLLSDWMIRRTKE-LIADQLPKKEEFVVFCPVTKLQGNI 308
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
Y +L+ E+ + PC C S L+++ CC + C S + L L + S
Sbjct: 309 YSTILETDEMVNFVEAHQPCWCNSGLSKLNCCDK-----HCSSGLLSVQGIYLSLLLKCS 363
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
NH+ L+ P+ + K ++ VF + + + + SF+ L+D CGKM+ L
Sbjct: 364 NHIGLLLPSFFASDKQNEKAYQICKQVFSHYPEFLEMSI-DASFLTLADPTYCGKMQILS 422
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
KL+ + + K+++FS SVR+L+ILE +++ + Y++ RLDGS R ++V FNS P
Sbjct: 423 KLLSHFHLESSKVIIFSESVRLLNILENYMVCRSYTYCRLDGSMRVEDRGAVVSKFNSDP 482
Query: 583 SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
S VFLIS + GG+GLN+ ANRV+IFDP+WNPA DLQA+DR+FR GQ+++V V+RL+S
Sbjct: 483 SLFVFLISKKCGGVGLNITGANRVIIFDPSWNPANDLQAEDRAFRIGQRQNVEVYRLISE 542
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFT 702
G++EE++Y RQ+YKQQL+N A+ G E+RYF GV + +GE+FG+ NLF+ L
Sbjct: 543 GTIEEILYLRQIYKQQLANTAIEGSNERRYFTGVDGDSDNKGEIFGVLNLFQPLRSGASL 602
Query: 703 SEIIESHEEQGQQQERHHCTN 723
+E + +QG + R+ TN
Sbjct: 603 TENVLKRFDQGMKM-RYVLTN 622
>gi|261196956|ref|XP_002624881.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081]
gi|239596126|gb|EEQ78707.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081]
Length = 1026
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/591 (40%), Positives = 354/591 (59%), Gaps = 16/591 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 222 YSLGLIPAPIAQWLRDYQVHGVEFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 281
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ KV ++G LI+CP +++QNW E RW +++ YHG ++
Sbjct: 282 GDERDAKRMR--KVRRRGDGVWYPRTLIVCPGTLLQNWRSELDRWGWWHMETYHGAGKEA 339
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+++T++ +Y ++ ++ V W+ V+ DE H +K KS+ A E+
Sbjct: 340 ALQSAASGRVEIMLTTYKTYVLNKDAINMVEWDCVVADECHIIKERKSETAQAMNEINAL 399
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 400 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICDPLKLGQSHDATVYQLSKAR 459
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC ++ Q AY R+L + +
Sbjct: 460 KTARKLVENLLPNFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQAEAYERVLDSDIVDYI 518
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
PCSCGS CC R+ G + V P + LQ++SNHL ++ P +D
Sbjct: 519 RTSSDPCSCGSGKKAGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDS 575
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
P+KQ KD E+ PD A +S + ++ + CGK + L+KL+ W GDK+
Sbjct: 576 PEKQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLRWWHGNGDKV 633
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+FS+SVR+L +L+ Y+ S LDG+ + R VD FN+ P + VFLISTRAGG
Sbjct: 634 LVFSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGG 693
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+Y
Sbjct: 694 VGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIY 753
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
KQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ N+F+ DN+ +I+
Sbjct: 754 KQQQANIGYTASTERRYFKGVQEKKDRKGEIFGLSNMFQYQGDNIVLRDIV 804
>gi|363744474|ref|XP_425043.3| PREDICTED: chromosome Z open reading frame, human C9orf102 [Gallus
gallus]
Length = 691
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/645 (40%), Positives = 379/645 (58%), Gaps = 41/645 (6%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
KS +FDD + EK + GQ T F+ LS +G++ +P +IN L
Sbjct: 71 KSVIFDDGDLEKP--------YFPGQNLPSSTDAFK---LSDNGDF----IPYTINRYLR 115
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS---------- 188
+QREG +FLY Y NK G ILGDDMGLGKT+Q I+FLAAV K + +
Sbjct: 116 GYQREGAQFLYWHYANKRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLQ 175
Query: 189 -TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVE 247
T+ K++K + K LI+ P SV+ NW+ E W F VS+ HG ++ L +++ E
Sbjct: 176 RTMKKESKCNPKKTFLIVAPLSVLYNWKDELDTWGYFKVSVLHGSKKEGDLNRIKQGKCE 235
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
V +T++++ R++ L+ + W VIVDE HR+KN KS++ LK RIGLTGTI+Q
Sbjct: 236 VALTTYETLRLYLDELNNIGWSAVIVDEVHRIKNPKSQITQTMKSLKCNVRIGLTGTILQ 295
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ + DW PG LG+R HF++ + +PL+ GQR TA +R + + L +
Sbjct: 296 NNMNELWCVMDWAVPGLLGSRVHFKKKFSDPLERGQRHTATKRELATGRKAMVKLARKMS 355
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+ LRRTK I + KED +V+C++++ QK YR +L+ ++ ++ PCSC S
Sbjct: 356 SWFLRRTKV-LISDQLPKKEDRMVYCSLTEFQKAVYRAVLKTEDVSLVLRAREPCSCNSG 414
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--AEL 485
+ CC ++++ L L L LQ+++NH+ L++ D KQ++ +
Sbjct: 415 RIRKNCCYKINSHG---ETVKSLQLSYLTILQKVANHVALLQT---DNTSKQQETHIKRV 468
Query: 486 ASAVFG--PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ VF PD + +A +F +SD K GKMR L++L+ + DK+LLFS+S +
Sbjct: 469 CNEVFSSFPDFMQLSKDA---AFETISDPKYSGKMRVLQQLLNHFRKNKDKVLLFSFSTK 525
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSA 603
+LD+LE++ I G F RLDGST S R +V +FN P + L+ST AGGLGLN V A
Sbjct: 526 LLDVLEQYCIASGLDFRRLDGSTKSEDRIRIVREFNRVPEINICLVSTMAGGLGLNFVGA 585
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
N V++FDP WNPA DLQA DR++R GQ + V VFRL+S G++EE++Y RQVYKQQL
Sbjct: 586 NVVILFDPTWNPANDLQAIDRAYRIGQCKDVKVFRLISLGTVEEMMYLRQVYKQQLHCAV 645
Query: 664 VSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIE 707
V + KRYF+ VQ KE QGELFGI NLF+ + T EI+E
Sbjct: 646 VGSENAKRYFKAVQGSKEHQGELFGIHNLFKLRTHGSCLTKEILE 690
>gi|340515251|gb|EGR45506.1| predicted protein [Trichoderma reesei QM6a]
Length = 1011
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 268/701 (38%), Positives = 393/701 (56%), Gaps = 52/701 (7%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P+ + L + G +PASI L ++Q +GV+FL+K + + GGILGDDMGLGKT+Q
Sbjct: 152 PYHDIELPQSGGL----IPASIAQYLRDYQVDGVRFLHKKFVYQEGGILGDDMGLGKTVQ 207
Query: 172 TIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVS 227
AFL FGK DE D + + ++ Y +LI+CP S+I NW E +RW ++V
Sbjct: 208 VAAFLTVAFGKTGDERDDKRLRHMRLLGERWYPKILIVCPGSLIANWRNELNRWGWWHVD 267
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
I+HG N+D +L A +E++IT++++Y+ S ++ V W+ +I DE HRLK+ S+
Sbjct: 268 IFHGANKDDVLGAARAGMLEIMITTYETYKNSRSSINMVQWDAIIADECHRLKDRYSETT 327
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A E+ RIGLTGT +QNK EL+ L DW PG GT+ + + +PL GQ A
Sbjct: 328 KAMQEVNALCRIGLTGTAIQNKYEELWTLLDWTNPGHFGTKAEWSQTITKPLTVGQSHDA 387
Query: 348 PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ +A + + LV +L +Y LRR K I H + K D VVFC +SDLQ AY
Sbjct: 388 TVAQLSLARQTAKKLVQNLLPRYFLRRMKS-LIAHQLPKKWDRVVFCPLSDLQMEAYENF 446
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKR-LDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
L+ E+ + C G + CC++ L + S V P ++ LQ+++NHL
Sbjct: 447 LRSKEVSIIRTASEDCEHGGK--KGWCCEQYLPSGKRWQS----RVFPSMMTLQKLANHL 500
Query: 466 ELIKPNPRDEPDKQRKDAELAS-AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
L+ P D ++R + ELA+ PD V + + L + + CGK + L++L
Sbjct: 501 TLLVPMTTDL--EERHEQELATLQTCMPDTWRVL-YEKRDRISNLVNPEFCGKWKILKRL 557
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ W G+K+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD FNS P++
Sbjct: 558 LKFWHGSGNKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEARQDVVDTFNSDPTQ 617
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLIST+AGG+GLN+ SAN+VVI DP+WNPA DLQAQDR++R GQ R V VFRL+S G+
Sbjct: 618 FVFLISTKAGGVGLNITSANKVVIMDPHWNPAYDLQAQDRAYRIGQTRDVEVFRLISVGT 677
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF---------RD 695
+EE+VY RQ+YKQQ +NI + E+RYF GVQ E +GE+FG+ N+F RD
Sbjct: 678 IEEIVYARQIYKQQQANIGYTASSERRYFRGVQQDTERKGEIFGLSNIFTYHSHMGLLRD 737
Query: 696 LSDNLFTSEI----------IESHEEQGQ------QQERHHCTNQGFKGLETHIVSSKDS 739
+ + +E +E ++G+ Q+E + G L + SS +
Sbjct: 738 IVNKTNIAEAKAGVHLADVDMEEAAKEGEDLGVVKQEETTDSEDGGLSQLADLLTSSDQA 797
Query: 740 NTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
TL S S KS + +L G+ Y H N +++
Sbjct: 798 KTLESLKSGQPKSD------AVQAILSAAGVEYTHDNAEVI 832
>gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus]
Length = 1546
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/658 (38%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDDE+ EK ++ FQ LS+D
Sbjct: 71 TIPLQRLQEVKSTKDYSRSLIFDDEDLEKPYFPDRKIPSLASAFQ-----------LSED 119
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 120 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 175
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 176 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 235
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 236 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 295
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 296 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 355
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 356 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPK-KEDRMVYCSLTDFQKAVYQTVLETE 414
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+I+NH+ L++
Sbjct: 415 DVALILTSSQPCTCGSGQKRRKCCYKT-NSRGDTVRTLCLSY--LTVLQKIANHVALLQA 471
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 472 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 529
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 530 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 589
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 590 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 649
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 650 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 707
>gi|358368845|dbj|GAA85461.1| DNA excision repair protein [Aspergillus kawachii IFO 4308]
Length = 1012
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/692 (37%), Positives = 391/692 (56%), Gaps = 54/692 (7%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 230 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 289
Query: 184 -ESSDSTILKDNKVDKKGY------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ + G+ LI+CP ++++NW E SRW ++ YHG N+++
Sbjct: 290 GDERDAKRMR--KMRRSGHDQWYPRTLIVCPGTLLKNWMAELSRWGWWHFDTYHGENKEL 347
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + +E+LIT++ +Y + ++ V+W+ VI DE H +K KS+ A +
Sbjct: 348 ALQAARSGRLEILITTYSTYLHNKDAINMVDWDCVIADECHVIKERKSETTKAMNMINAL 407
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG LG +++ EPLK GQ A +R A
Sbjct: 408 CRIGLTGTAIQNKYEELWTLLNWTNPGMLGPVTVWKKTISEPLKIGQSHDATVHQLRRAR 467
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L ++ LRR K I + K D VVFC ++D Q AY +L + +
Sbjct: 468 KTAKKLVENLLPQFFLRRMKT-LIADQLPKKVDRVVFCPLTDTQADAYVNILGSDMVSYI 526
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL-----VLPCLVKLQQISNHLELIKP 470
+ PC CGS CC++ P L V P + LQ++SNHL ++ P
Sbjct: 527 KHSSDPCDCGSRQKAGWCCRQF--------LPSGLTWRSYVFPAIAVLQKLSNHLAILIP 578
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
D +KQ KD E+ + + +S + ++ + CGK + L +L+ W +
Sbjct: 579 QGVDSNEKQEKDKEMLELAVPEQWEKL--YRSRDSIVNYANPEFCGKWKVLRRLLKWWHA 636
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
GDK+L+FS+SVR+L +L+ Y+ S LDGS R +VDDFNS+P + VFLIS
Sbjct: 637 NGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSNPRQFVFLIS 696
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
TR+GG+GLN+ SAN+VVI DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY
Sbjct: 697 TRSGGVGLNITSANKVVIVDPNWNPSHDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVY 756
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE--- 707
RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GELFG+ NLF + N+ +I+
Sbjct: 757 ARQIYKQQQANIGYNASSERRYFKGVQEKKDQKGELFGLDNLFEYKNQNILLRDIVNKTN 816
Query: 708 -SHEEQGQQ------QERHHCTNQGFKGLETHIVSSKDSNTLLST-GSKTRKSSDPEMAR 759
+ + G Q + + ++ F G S D+N ++S + R D E +
Sbjct: 817 VAESKAGVQVMDIDVEFDPNVSDTTFTG------KSDDTNEVMSQLAAMIRGEDDDEGST 870
Query: 760 TSK-----------PLLEDMGIVYAHRNDDIV 780
SK +L G+ Y H N++++
Sbjct: 871 NSKTPINTKHDPIQAILAGAGVEYTHLNNEVI 902
>gi|119479961|ref|XP_001260009.1| DNA excision repair protein (Rad26L), putative [Neosartorya
fischeri NRRL 181]
gi|119408163|gb|EAW18112.1| DNA excision repair protein (Rad26L), putative [Neosartorya
fischeri NRRL 181]
Length = 1077
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/730 (35%), Positives = 398/730 (54%), Gaps = 51/730 (6%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQR 142
FDD E ++ E F + + + G +E + L Y + +PA I L +Q
Sbjct: 260 FDDVEFSDDERLE-FLKEKPAFRNIEPCGKYEDITLP----YSLGLIPAPIAQWLRPYQV 314
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKG 200
EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK DE + K + + G
Sbjct: 315 EGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRSGRDG 374
Query: 201 Y---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYR 257
+ LI+CP ++IQNW EF+RW ++V YHG N+++ L+ + +E+LIT++ +Y
Sbjct: 375 WYPRTLIVCPGTLIQNWISEFNRWGWWHVDTYHGDNKELALQAARSGRLEILITTYGTYL 434
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+ ++ V W+ V+ DE H +K S+ A + RIGLTGT +QNK EL+ L
Sbjct: 435 HNKDAVNMVEWDCVVADECHIIKERSSETTKAMNVVNALCRIGLTGTAIQNKYEELWTLL 494
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKE 376
+W PG LG ++ EPLK GQ A + A + + LV +L ++ LRR K
Sbjct: 495 NWTNPGKLGPVTTWKRTISEPLKIGQSHDATLYQLSKARKTAKKLVENLLPQFFLRRMKT 554
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
I + K D VVFC +++ Q AY +L +Q + C CGS CC++
Sbjct: 555 -LIADQLPKKSDRVVFCPLTETQASAYENILDSDIVQYIKTSSDKCDCGSGKKAGWCCRQ 613
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
G V P + LQ++SNHL + P D +KQ KD E+ +
Sbjct: 614 FLPSGGRWQN---YVFPAIAILQKLSNHLATLIPQGADSLEKQEKDKEMLEIAVPDQWEQ 670
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG 556
+ +S + ++ + CGK + L KL+ W + GDK+L+FS+SVR+L +L+
Sbjct: 671 L--YRTRDSIVNYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTS 728
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
Y+ S LDGS R +VD+FNS P + VFLISTR+GG+GLN+ SAN+VV+ DPNWNP+
Sbjct: 729 YNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITSANKVVVVDPNWNPS 788
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGV 676
DLQAQDR++R GQ R+V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GV
Sbjct: 789 HDLQAQDRAYRIGQSRNVEVFRLISAGTIEEIVYARQIYKQQQANIGYNASSERRYFKGV 848
Query: 677 QDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSS 736
Q+ K+ +GE+FG+ NLF ++N+ +I+ + + G + ++ + S
Sbjct: 849 QEKKDQKGEIFGLDNLFEFKTNNIVLRDIV--------NKTNVAESKAGVQVMDIAVDES 900
Query: 737 KDSNTLLSTGSKTRKSSDPEMARTS--------------------------KPLLEDMGI 770
+ T L + S+T+ D M++ + + +L G+
Sbjct: 901 DTATTTLDSSSETKNQDDQVMSQLAAMIRGDADDAAPQAQAAVTAQKHDPIQAILAGAGV 960
Query: 771 VYAHRNDDIV 780
Y H N++++
Sbjct: 961 EYTHLNNEVI 970
>gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus]
Length = 708
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/658 (38%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDDE+ EK ++ FQ LS+D
Sbjct: 71 TIPLQRLQEVKSTKDYSRSLIFDDEDLEKPYFPDRKIPSLASAFQ-----------LSED 119
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 120 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 175
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 176 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 235
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 236 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 295
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 296 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 355
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 356 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLP-KKEDRMVYCSLTDFQKAVYQTVLETE 414
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+I+NH+ L++
Sbjct: 415 DVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQKIANHVALLQA 471
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 472 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 529
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 530 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 589
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 590 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 649
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 650 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 707
>gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus]
Length = 685
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/658 (39%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDDE+ EK ++ FQ LS+D
Sbjct: 48 TIPLQRLQEVKSTKDYSRSLIFDDEDLEKPYFPDRKIPSLASAFQ-----------LSED 96
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 97 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 152
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 153 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 212
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 213 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 272
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 273 KAVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 332
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 333 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLP-KKEDRMVYCSLTDFQKAVYQTVLETE 391
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+I+NH+ L++
Sbjct: 392 DVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQKIANHVALLQA 448
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 449 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 506
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 507 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 566
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 567 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 626
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 627 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 684
>gi|239609713|gb|EEQ86700.1| DNA excision repair protein [Ajellomyces dermatitidis ER-3]
Length = 1026
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/589 (40%), Positives = 351/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 222 YSLGLIPAPIAQWLRDYQVHGVEFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 281
Query: 184 -ESSDSTILKDNKVDKKGY----VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
+ D+ ++ + G LI+CP +++QNW E RW +++ YHG ++ L
Sbjct: 282 GDERDAKRMRKMRRRGDGVWYPRTLIVCPGTLLQNWRSELDRWGWWHMETYHGAGKEAAL 341
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + VE+++T++ +Y ++ ++ V W+ V+ DE H +K KS+ A E+ R
Sbjct: 342 QSAASGRVEIMLTTYKTYVLNKDAINMVEWDCVVADECHIIKERKSETAQAMNEINALCR 401
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ PLK GQ A + A +
Sbjct: 402 IGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICVPLKLGQSHDATVYQLSKARKT 461
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++ Q AY R+L + +
Sbjct: 462 ARKLVENLLPNFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQAEAYERVLDSDIVDYIRT 520
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
PCSCGS CC R+ G + V P + LQ++SNHL ++ P +D P+
Sbjct: 521 SSDPCSCGSGKKAGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDSPE 577
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK + L+KL+ W S GDK+L+
Sbjct: 578 KQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLRWWHSNGDKVLV 635
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDG+ + R VD FN+ P + VFLISTRAGG+G
Sbjct: 636 FSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGGVG 695
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 696 LNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIYKQ 755
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ N+F+ DN+ +I+
Sbjct: 756 QQANIGYTASTERRYFKGVQEKKDRKGEIFGLSNMFQYQGDNIVLRDIV 804
>gi|242786879|ref|XP_002480891.1| DNA excision repair protein (Rad26L), putative [Talaromyces
stipitatus ATCC 10500]
gi|218721038|gb|EED20457.1| DNA excision repair protein (Rad26L), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1052
Score = 451 bits (1159), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 362/605 (59%), Gaps = 24/605 (3%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P+E + L Y + +PA I L ++Q EG FL++L+ + GGILGDDMGLGKT+Q
Sbjct: 224 PYEDIPLP----YSLGLIPAPIAQWLRDYQVEGAAFLHELFVYQKGGILGDDMGLGKTVQ 279
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFN 225
IAFL A +GK + + + + K+ + G LI+CP ++I+NW+ E RW +
Sbjct: 280 VIAFLTAAYGK-TADERDMKRMRKLRRSGDDVWYPRTLIVCPGTLIENWKSELQRWGWWA 338
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V ++HG ++ L+ +A +E+L+T++ +YR++ ++ V W+ V+ DE H++K KS+
Sbjct: 339 VGLFHGDRKEEALQAAKAGRLEILVTTYVTYRMNKDAINMVEWDCVVADECHQIKERKSE 398
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+A E+ RIGLTGT +QNK EL+ L +W PG LG ++ EPLK GQ
Sbjct: 399 TTIAMNEINALCRIGLTGTAIQNKYEELWTLLNWTNPGKLGPVTAWKRAVAEPLKIGQSH 458
Query: 346 TAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
A + A + + LV +L ++ LRR K I + K D VVFC ++D Q AY
Sbjct: 459 DATLYQLSKARKTAKKLVQNLLPEFFLRRMKT-LIADQLPKKSDRVVFCPLTDTQADAYE 517
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECC-KRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
L + + N C CGS CC K L + S V P + LQ++SN
Sbjct: 518 NFLNSDALVYIKNASELCDCGSGKKSGWCCYKYLPSGQKWQS----YVFPAIQNLQKLSN 573
Query: 464 HLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRAL 521
HL ++ P +D +KQ KD E+ PD +L +S I ++ + CGK + L
Sbjct: 574 HLAILIPQGQDPREKQDKDLEMLQLAV-PDRWRELY---QTRDSIINYANPEFCGKWKVL 629
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
KL+ W + GDK+L+FS+SVR+L +L+ Y+ S LDG+ R VD+FNS
Sbjct: 630 RKLLKWWHANGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGAMSYEDRAKAVDEFNSD 689
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
P + VFLISTRAGG+GLN+VSAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+S
Sbjct: 690 PQQFVFLISTRAGGVGLNIVSANKVVVVDPNWNPSHDLQAQDRAYRIGQHRDVEVFRLIS 749
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLF 701
AG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+
Sbjct: 750 AGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLSNLFEYQNNNIV 809
Query: 702 TSEII 706
+I+
Sbjct: 810 LRDIV 814
>gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 1542
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/641 (38%), Positives = 378/641 (58%), Gaps = 33/641 (5%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+S +FDDE+ EK ++ + FQ LS+DG+ +P +IN L
Sbjct: 88 RSLIFDDEDLEKPYFPDQKIPSLVSAFQ-----------LSEDGD----SIPYTINRYLR 132
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS---------- 188
++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV K + +
Sbjct: 133 DYQREGAQFLYRHYIKGRGCILGDDMGLGKTIQVISFLAAVLHKKGTREDIENNMPEFLL 192
Query: 189 -TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVE 247
++ K++ + LI+ P SV+ NW+ E W F V++ HG +D L +L+ E
Sbjct: 193 KSMKKESSSTARKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGSKKDNELTRLKQRKCE 252
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T++++ R+ L+ + W +IVDEAHR++N +++ +K + RIGLTGTI+Q
Sbjct: 253 IALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQ 312
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + L +
Sbjct: 313 NNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMS 372
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
Y LRRTK G L KED +V+ +++D QK Y+ +L+ ++ ++ PC+CGS
Sbjct: 373 GYFLRRTKTLIKGQLPK-KEDRMVYSSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSG 431
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+ +CC + N G CL L LQ+++NH+ L++ + ++ +
Sbjct: 432 QKRRKCCYKT-NSQGDTVRTLCLSY--LTVLQKVANHVALLQAASTSK-HQETLIKRICD 487
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
VF D V +++ +F LSD K GKM+ L++L+ + DK+LLFS+S ++LD+
Sbjct: 488 QVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLDQLLNHFRKHRDKVLLFSFSTKLLDV 546
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
L+++ + G + RLDGST S R +V +FNSS + L+ST AGGLGLN + AN V+
Sbjct: 547 LQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFIGANVVI 606
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V +
Sbjct: 607 LFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSE 666
Query: 668 LEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 667 NAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 707
>gi|396460218|ref|XP_003834721.1| hypothetical protein LEMA_P068640.1 [Leptosphaeria maculans JN3]
gi|312211271|emb|CBX91356.1| hypothetical protein LEMA_P068640.1 [Leptosphaeria maculans JN3]
Length = 1199
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/699 (38%), Positives = 390/699 (55%), Gaps = 58/699 (8%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+PA I L ++Q EGV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK +++
Sbjct: 259 IPAPIAQWLRDYQVEGVEFLHERFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKTATNND 318
Query: 189 T--ILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN---RDMILEK 240
+ K ++ K + VLI+CP +++QNWE E S+W + V +HG N R +L
Sbjct: 319 AKCMRKIRRMPGKRWYPRVLIVCPGTLMQNWEDELSKWGWWEVYRFHGANVADRKGVLGA 378
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E++IT++ +YR + S ++ V+W+ VI DE H++K++ +++ A + RIG
Sbjct: 379 AAKGMLEIMITTYTTYRNNESEMNTVDWDCVIADECHQIKSKDAEITKAMNRINALCRIG 438
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QNK EL+NL +W PG+ G+ + + + PLK GQ A + + R Q
Sbjct: 439 LTGTAIQNKYEELWNLLNWSRPGAYGSAQEWTQKVSNPLKMGQAHDATNAQLADSRSRAQ 498
Query: 361 HLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
LV +L LRR K I H + K D ++FC +++ Q AYR L+ + +
Sbjct: 499 ELVHNILPSVFLRRMKT-LIAHQLPKKSDRIIFCQLTETQADAYRTFLESDRCEFIRTSK 557
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CGS T+ CC + +G F + PC+V LQ+++NHL LI P D +KQ
Sbjct: 558 EECDCGSKKTRGHCCYSVIPSEGQPWHRF--MFPCMVTLQKLANHLALIVPVSSDSREKQ 615
Query: 480 RKDA---ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
KD E+A D+ + N N+S + CGK + L +++ W S GDK+L
Sbjct: 616 AKDLQNLEIACPDTVKDLFQIRDNILNQS-----QSEFCGKWKVLRRMLDFWHSNGDKVL 670
Query: 537 LFSYSVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
+FS+SVR+L +L+ G Y+FS LDGS R V DFN+ ++ VFLIST+AG
Sbjct: 671 IFSHSVRLLRLLKGLFDVYGTKYNFSYLDGSMKYEERSKAVADFNADANQFVFLISTKAG 730
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLN+ SAN+VVI DPNWNPA DLQAQDR++R GQ R V VFRL+S+G++EE+VY RQ+
Sbjct: 731 GVGLNITSANKVVIMDPNWNPAHDLQAQDRAYRIGQTRDVEVFRLVSSGTVEEVVYARQI 790
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF-----RDLSDNLFTSEIIESH 709
YKQQ +NI S E+RYF+GV D +GELFG+ NLF L D L + I ES
Sbjct: 791 YKQQQANIGYSASEERRYFKGVMDKSSKKGELFGLENLFSFEQNSILRDILHKTNIAESK 850
Query: 710 -----------EEQGQQQERHHCTNQGF------------KGLETHIVSSKDSNTLLSTG 746
E Q + + +N+ K L +S+ S+T G
Sbjct: 851 AGITAFDLQLDESQAESNDDEILSNKALGITDDDGNLAEIKRLADSFLSTHTSDTEPRKG 910
Query: 747 SKT---RKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK 782
K RK DP A +L G+ Y H N +++ +
Sbjct: 911 RKIPPKRKGPDPINA-----ILARAGVQYTHENSEVIGR 944
>gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus]
Length = 1537
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/658 (38%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDD++ EK ++ FQ LS+D
Sbjct: 62 TIPLQRLQEVKSTKDYSRSLIFDDKDLEKPYFPDRKIPSLASAFQ-----------LSED 110
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 111 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 166
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 167 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 226
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 227 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 286
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 287 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 346
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 347 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPK-KEDRMVYCSLTDFQKAVYQTVLETE 405
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+++NH+ L++
Sbjct: 406 DVALILTSSQPCTCGSGQKRRKCCYKT-NSRGDTVRTLCLSY--LTVLQKVANHVALLQA 462
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 463 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 520
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 521 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 580
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 581 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 640
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 641 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 698
>gi|109504572|ref|XP_341481.3| PREDICTED: uncharacterized protein LOC361197 isoform 2 [Rattus
norvegicus]
gi|109505337|ref|XP_001058999.1| PREDICTED: uncharacterized protein LOC361197 isoform 1 [Rattus
norvegicus]
Length = 1533
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/641 (38%), Positives = 378/641 (58%), Gaps = 33/641 (5%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+S +FDDE+ EK ++ + FQ LS+DG+ +P +IN L
Sbjct: 79 RSLIFDDEDLEKPYFPDQKIPSLVSAFQ-----------LSEDGD----SIPYTINRYLR 123
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS---------- 188
++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV K + +
Sbjct: 124 DYQREGAQFLYRHYIKGRGCILGDDMGLGKTIQVISFLAAVLHKKGTREDIENNMPEFLL 183
Query: 189 -TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVE 247
++ K++ + LI+ P SV+ NW+ E W F V++ HG +D L +L+ E
Sbjct: 184 KSMKKESSSTARKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGSKKDNELTRLKQRKCE 243
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T++++ R+ L+ + W +IVDEAHR++N +++ +K + RIGLTGTI+Q
Sbjct: 244 IALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMKAVKCKVRIGLTGTILQ 303
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + L +
Sbjct: 304 NNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMS 363
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
Y LRRTK G L KED +V+ +++D QK Y+ +L+ ++ ++ PC+CGS
Sbjct: 364 GYFLRRTKTLIKGQLPK-KEDRMVYSSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSG 422
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+ +CC + N G CL L LQ+++NH+ L++ + ++ +
Sbjct: 423 QKRRKCCYKT-NSQGDTVRTLCLSY--LTVLQKVANHVALLQAASTSK-HQETLIKRICD 478
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
VF D V +++ +F LSD K GKM+ L++L+ + DK+LLFS+S ++LD+
Sbjct: 479 QVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLDQLLNHFRKHRDKVLLFSFSTKLLDV 537
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
L+++ + G + RLDGST S R +V +FNSS + L+ST AGGLGLN + AN V+
Sbjct: 538 LQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFIGANVVI 597
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V +
Sbjct: 598 LFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSE 657
Query: 668 LEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 658 NAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 698
>gi|212543509|ref|XP_002151909.1| DNA excision repair protein (Rad26L), putative [Talaromyces
marneffei ATCC 18224]
gi|210066816|gb|EEA20909.1| DNA excision repair protein (Rad26L), putative [Talaromyces
marneffei ATCC 18224]
Length = 1059
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/584 (41%), Positives = 351/584 (60%), Gaps = 12/584 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PA I L ++Q EG FL+KL+ + GGILGDDMGLGKT+Q IAFL A +GK DE
Sbjct: 239 IPAPIAQWLRDYQVEGAAFLHKLFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKTGDERD 298
Query: 187 DSTILKDNKV-DKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
+ K + D Y LI+CP ++I+NW+ E RW + V ++HG ++ L+ +A
Sbjct: 299 MKRMRKLRRSGDNVWYPCTLIVCPGTLIENWKSELQRWGWWAVGVFHGDRKEEALQAAKA 358
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+E+LIT++ +YR++ ++ V W+ V+ DE H++K KS+ +A E+ RIGLTG
Sbjct: 359 GRLEILITTYVTYRMNKDAINMVEWDCVVADECHQIKERKSETTIAMNEINALCRIGLTG 418
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QNK EL+ L +W PG LG ++ +PLK GQ A + A + + LV
Sbjct: 419 TAIQNKYEELWTLLNWTNPGKLGPVTAWKRAVADPLKIGQSHDATLYQLSKARKTAKKLV 478
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+L ++ LRR K I + K D VVFC ++D Q AY L + + N C
Sbjct: 479 QNLLPEFFLRRMKT-LIADQLPKKSDRVVFCPLTDTQADAYENFLNSDALVYIKNASEMC 537
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
CGS CC + L V P + LQ++SNHL ++ P +D +KQ KD
Sbjct: 538 DCGSRKKSGWCCYKF--LPSGQKWQ-NYVFPAIQNLQKLSNHLAILIPQGQDPREKQDKD 594
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
E+ PD +S I ++ + CGK + L KL+ W + GDK+L+FS+SV
Sbjct: 595 LEMLQLAV-PD-QWRELYQTRDSIINYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSV 652
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVS 602
R+L +L+ Y+ S LDG+ R +VD+FNS P + VFLISTRAGG+GLN+VS
Sbjct: 653 RLLKMLQMLFNHTSYNVSYLDGAMSYEDRAKVVDEFNSDPQQFVFLISTRAGGVGLNIVS 712
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
AN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI
Sbjct: 713 ANKVVVVDPNWNPSHDLQAQDRAYRIGQHRDVEVFRLISAGTIEEIVYARQIYKQQQANI 772
Query: 663 AVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+ E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+ +I+
Sbjct: 773 GYNASTERRYFKGVQEKKDQKGEIFGLSNLFEYQNNNIVLRDIV 816
>gi|322710278|gb|EFZ01853.1| putative DNA repair protein RAD26 [Metarhizium anisopliae ARSEF 23]
Length = 1085
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 264/701 (37%), Positives = 393/701 (56%), Gaps = 35/701 (4%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD +P +D E P +PA I L ++Q G KFL++ + + G ILGDD
Sbjct: 143 EFDVRSGIKPSRPYRDIELPQSAGLIPAPIAQYLRDYQVVGAKFLHRKFVFQEGCILGDD 202
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFLAA FGK DE D + + + Y +L+ICP S+I NW+ E +
Sbjct: 203 MGLGKTVQVAAFLAAAFGKTGDERDDKRMREIRFCPGRWYPRILVICPGSLIINWKNELN 262
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW +++ IYHG N+D I+ + +E++IT++D+Y+ + S ++ V W+ I DE HRL
Sbjct: 263 RWGWWHIDIYHGINKDDIMGTARSGLLEIMITTYDTYKNNRSSINMVQWDACIADECHRL 322
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ RIGLTGT +QNK EL+ L DW PG G + + + +PL
Sbjct: 323 KDGSSETTKAMNEVNALCRIGLTGTAIQNKYEELWTLLDWTNPGHFGPKSEWMQTISKPL 382
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + +A + + LV +L +Y LRR K I + K D VVFC ++DL
Sbjct: 383 TVGQSHDATVAQLSLARQTAKKLVENLLPRYFLRRMKT-LIADQLPKKTDRVVFCPLTDL 441
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q AY L PEI L PC G + CC+ L P +V P ++ L
Sbjct: 442 QADAYENFLSCPEIHLLRTISDPCPHGR--KKGWCCQT--RLPDGRRWP-AIVFPSMITL 496
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q+++NHL L+ P+ D +K +K+ E + Q + L + + CGK
Sbjct: 497 QKLANHLALLTPSTTDLENKHKKELETLKLCLPNTWKPL--YEQRDQITNLVNPEFCGKW 554
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ ++KL+ W GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD F
Sbjct: 555 KVMKKLLRFWHQNGDKVLVFSHSVRLLRILQHLFTSTSYNVSYLDGSLSYEERQDVVDTF 614
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 615 NSDPAQFVFLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQTRDVEVFR 674
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF----- 693
L+S G++EE+VY RQVYKQQ +NI + E+RYF+GVQ ++ +GE+FG+ N+F
Sbjct: 675 LISQGTVEEIVYARQVYKQQQANIGYTASSERRYFKGVQHDEDRKGEIFGLSNIFTYHGT 734
Query: 694 ----RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSN-----TLLS 744
R++ +N +E + E+ + F L+ ++D LL+
Sbjct: 735 SSLVRNIVNNTNIAEAKAGVDMADVDMEQAAKDEEAFGPLKREDAGAEDGGVSQLAALLT 794
Query: 745 TGSK-----TRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
++ ++KS P+ + + +L +G+ Y H N ++V
Sbjct: 795 AENQQQLLESKKSGAPK-SDAIQAILTSVGVEYTHDNSEVV 834
>gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus]
gi|172046593|sp|Q9JIM3.2|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein
RAD26-like
Length = 699
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/658 (38%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDD++ EK ++ FQ LS+D
Sbjct: 62 TIPLQRLQEVKSTKDYSRSLIFDDKDLEKPYFPDRKIPSLASAFQ-----------LSED 110
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 111 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 166
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 167 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 226
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 227 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 286
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 287 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 346
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 347 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLP-KKEDRMVYCSLTDFQKAVYQTVLETE 405
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+++NH+ L++
Sbjct: 406 DVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQKVANHVALLQA 462
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 463 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 520
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 521 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 580
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 581 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 640
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 641 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 698
>gi|327355372|gb|EGE84229.1| DNA excision repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1026
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/589 (40%), Positives = 350/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 222 YSLGLIPAPIAQWLRDYQVHGVEFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 281
Query: 184 -ESSDSTILKDNKVDKKGY----VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
+ D+ ++ + G LI+CP +++QNW E RW +++ YHG ++ L
Sbjct: 282 GDERDAKRMRKMRRRGDGVWYPRTLIVCPGTLLQNWRSELDRWGWWHMETYHGAGKEAAL 341
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + VE+++T++ +Y ++ ++ V W+ V+ DE H +K KS+ A E+ R
Sbjct: 342 QSAASGRVEIMLTTYKTYVLNKDAINMVEWDCVVADECHIIKERKSETAQAMNEINALCR 401
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ PLK GQ A + A +
Sbjct: 402 IGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICVPLKLGQSHDATVYQLSKARKT 461
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++ Q AY R+L + +
Sbjct: 462 ARKLVENLLPNFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQAEAYERVLDSDIVDYIRT 520
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
PCSCGS CC R+ G + V P + LQ++SNHL ++ P +D P+
Sbjct: 521 SSDPCSCGSGKKAGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDSPE 577
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK + L+KL+ W GDK+L+
Sbjct: 578 KQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLRWWHGNGDKVLV 635
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDG+ + R VD FN+ P + VFLISTRAGG+G
Sbjct: 636 FSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGGVG 695
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 696 LNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIYKQ 755
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ N+F+ DN+ +I+
Sbjct: 756 QQANIGYTASTERRYFKGVQEKKDRKGEIFGLSNMFQYQGDNIVLRDIV 804
>gi|296810938|ref|XP_002845807.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480]
gi|238843195|gb|EEQ32857.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480]
Length = 1011
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 293/818 (35%), Positives = 432/818 (52%), Gaps = 73/818 (8%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F H P +E + L Y + VPA I L ++Q +GV FL++L+ + GGILGDD
Sbjct: 201 FSHVKPSRKYEDIQLP----YSLGLVPAPIAQWLRDYQVDGVGFLHELFVYQKGGILGDD 256
Query: 164 MGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEI 216
MGLGKT+Q IAFL A +GK + D+ ++ K+ +KG LIICP ++IQNW
Sbjct: 257 MGLGKTVQVIAFLTAAYGKTGDERDAKRMR--KMRRKGESTWYPRTLIICPGTLIQNWRD 314
Query: 217 EFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
E RW ++V +YHG ++D L+ + VE+LIT++ +YR++ S ++ V W+ VI DE
Sbjct: 315 ELDRWGWWHVDVYHGESKDAALKSAASGRVEILITTYTTYRLNRSAINMVEWDCVIADEC 374
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
H +K KS+ A EL RIGLTGT +QNK EL+ L +W PG G ++
Sbjct: 375 HTIKERKSETAKAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGQFGPVSTWKSTIC 434
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
EPLK GQ A + A + + LV +L + LRR K I + K D VVFC +
Sbjct: 435 EPLKVGQSHDATVYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPL 493
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
++ Q AY L I + N CSCGS CC+ G V P +
Sbjct: 494 TETQSDAYENFLDSDIIDYIKNSSDHCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAI 550
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVK 513
LQ++SNHL ++ P P D DKQ KD E+ PD +L S I S+ +
Sbjct: 551 SNLQKLSNHLAILIPQPMDPKDKQAKDLEMLQIAV-PDQWRELYRTRG---SIINYSNPE 606
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
CGK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDG+ R +
Sbjct: 607 FCGKWKVLKKLLKWWHTNGDKVLIFSHNVRLLKMLQMLFNHTSYNVSYLDGAMSYEERAN 666
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+V+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R
Sbjct: 667 VVNSFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQLRD 726
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V VFRL+SAG++EE+VY RQ+YKQQ +NI S E+RYF GVQ+ K+ +GE+FG+ NLF
Sbjct: 727 VEVFRLVSAGTIEEIVYARQIYKQQQANIGYSASTERRYFRGVQEKKDQKGEIFGLANLF 786
Query: 694 RDLSDNLFTSEIIESHE-------------EQGQQQERHHCTNQG-----FKGLETHIVS 735
++N+ +I+ E ++ +++C + F E V+
Sbjct: 787 EYQNNNVVLRDIVNKTNIAESKAGVQVIDFEMEAERSQNNCDEEDEKRYPFTADENDDVA 846
Query: 736 SKDSNTLL---STGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK---QPGFQRK 789
L+ G +K++ + +L G+ Y H N +++ + R+
Sbjct: 847 MSQLAALVRGEGIGDDNKKAAQTLKHDPIQAILAGAGVEYTHENTEVIGSSKVEAQLSRR 906
Query: 790 KE-----ESI-------PQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY---- 833
E E I P+ +P I + RN GK + + +
Sbjct: 907 AELVNDGEEIGEEQVFRPESRDGKPSSIVVRGRN------GKSARFKYHPPREVMKRQFC 960
Query: 834 SLLARFMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
S+ AR+ DV EF+ + TP+ R L+ + K ++
Sbjct: 961 SMAARYGFRDVTEFALTVEGLTPAQRRTWLEKWYKERR 998
>gi|327296351|ref|XP_003232870.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
gi|326465181|gb|EGD90634.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
Length = 1019
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 294/811 (36%), Positives = 433/811 (53%), Gaps = 59/811 (7%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F H P +E + L Y + +PA I L +Q EGV FL++L+ + GGILGDD
Sbjct: 199 FSHAKPSRKYEDVQLP----YSLGLIPAPIAQWLRNYQVEGVGFLHELFVYQKGGILGDD 254
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEF 218
MGLGKT+Q IAFL A +GK DE + K + + + LI+CP ++IQNW EF
Sbjct: 255 MGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRKGEYAWYPRTLIVCPGTLIQNWRDEF 314
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
RW ++V +YHG ++D L+ + E+LIT++ +YR++ S ++ V W+ VI DE H
Sbjct: 315 DRWGWWHVDVYHGDSKDAALKSAASGRAEILITTYTTYRLNRSAVNMVEWDCVIADECHI 374
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+K+ KS+ A EL RIGLTGT +QNK EL+ L +W PG G ++ EP
Sbjct: 375 IKDRKSETAKAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGQFGPISTWKSTICEP 434
Query: 339 LKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
LK GQ A + A + + LV +L + LRR K I + K D VVFC +++
Sbjct: 435 LKVGQSHDATIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPLTE 493
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
Q AY L + + N CSCGS CC+ +G V P +
Sbjct: 494 TQSDAYENFLDSDIVDYIKNSSDYCSCGSGKKAGWCCRMFLPQEGKWQS---YVFPAISN 550
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSC 515
LQ+ISNHL ++ P P D DKQ KD E+ PD +L S + S+ + C
Sbjct: 551 LQKISNHLAILIPQPMDPKDKQAKDLEMLQVAV-PDQWRELYRTRG---SIMNYSNPEFC 606
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R ++V
Sbjct: 607 GKWKVLKKLLKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIV 666
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V
Sbjct: 667 NAFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRDVE 726
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRD 695
VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF
Sbjct: 727 VFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLANLFEY 786
Query: 696 LSDNLFTSEIIE----SHEEQGQQ-----QERHHCTNQGFKGLETHIVSSKDSNTLLSTG 746
++N+ +I+ + + G Q ER + G + +++ D N L+
Sbjct: 787 QNNNVVLRDIVNKTNIAESKAGVQVIDFEMEREQSQSDYDGGDDKLNLTTPDENDDLAMS 846
Query: 747 SKTRKSSDPEMARTSK------------PLLEDMGIVYAHRNDDIVNK---QPGFQRKKE 791
+A +K +L G+ Y H N +++ + R+ E
Sbjct: 847 QLAALVRGEGLAEENKKFVPILKHDPIQAILAGAGVEYTHENTEVIGSSKIEAQLSRRAE 906
Query: 792 -----ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY------SLLARFM 840
E I ++ RP K ++L +S A+ K R E S+ AR+
Sbjct: 907 LVNDGERIGEEQVFRPESREGKPASILVRGKNGQS-ATFKYRPPPEVMKRQFCSMAARYG 965
Query: 841 GMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
DV EF+ + T + R L+++ K ++
Sbjct: 966 FRDVTEFALTVEGLTSAQRRTWLENWYKERR 996
>gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 708
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/657 (38%), Positives = 383/657 (58%), Gaps = 33/657 (5%)
Query: 63 LPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDG 122
+P Q + + +S +FDDE+ EK ++ + FQ LS+DG
Sbjct: 72 IPLQRLQEVKSTKDHSRSLIFDDEDLEKPYFPDQKIPSLVSAFQ-----------LSEDG 120
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV K
Sbjct: 121 D----SIPYTINRYLRDYQREGAQFLYRHYIKGRGCILGDDMGLGKTIQVISFLAAVLHK 176
Query: 183 DESSD-----------STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG 231
+ + ++ K++ + LI+ P SV+ NW+ E W F V++ HG
Sbjct: 177 KGTREDIENNMPEFLLKSMKKESSSTARKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHG 236
Query: 232 PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
+D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR++N +++
Sbjct: 237 SKKDNELTRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIRNPNARVTEVMK 296
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
+K + RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 297 AVKCKVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRE 356
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
+ + L + Y LRRTK G L KED +V+ +++D QK Y+ +L+ +
Sbjct: 357 LATGRKAMHRLAKKMSGYFLRRTKTLIKGQLP-KKEDRMVYSSLTDFQKAVYQTVLETED 415
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
+ ++ PC+CGS + +CC + N G CL L LQ+++NH+ L++
Sbjct: 416 VALILTSSQPCTCGSGQKRRKCCYK-TNSQGDTVRTLCLSY--LTVLQKVANHVALLQAA 472
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 473 STSK-HQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLDQLLNHFRKH 530
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+ST
Sbjct: 531 RDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVST 590
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
AGGLGLN + AN V++FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y
Sbjct: 591 MAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYL 650
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 651 RQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 707
>gi|350635873|gb|EHA24234.1| hypothetical protein ASPNIDRAFT_181619 [Aspergillus niger ATCC
1015]
Length = 978
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/686 (37%), Positives = 387/686 (56%), Gaps = 43/686 (6%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 194 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 253
Query: 184 -ESSDSTILKDNKVDKKGY------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ + G+ LI+CP ++++NW E +RW ++ YHG N+++
Sbjct: 254 GDERDAKRMR--KMRRSGHDQWYPRTLIVCPGTLLKNWMAELARWGWWHFDTYHGENKEL 311
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + +E+LIT++ +Y + ++ V+W+ VI DE H +K KS+ A +
Sbjct: 312 ALQAARSGRLEILITTYSTYLHNKDAINMVDWDCVIADECHIIKERKSETTKAMNMINAL 371
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG LG +++ EPLK GQ A +R A
Sbjct: 372 CRIGLTGTAIQNKYEELWTLLNWTNPGKLGPVTVWKKTISEPLKIGQSHDATVHQLRRAR 431
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ LV +L ++ LRR K I + K D VVFC ++D Q AY +L +
Sbjct: 432 TTAKKLVENLLPQFFLRRMKT-LIADQLPKKVDRVVFCPLTDTQADAYVNILGSDMASYI 490
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ PC CGS CC++ G + V P + LQ++SNHL ++ P D
Sbjct: 491 KHSTDPCDCGSRQKAGWCCRQFLP-SGVTWRSY--VFPAIAVLQKLSNHLAILIPQGVDS 547
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+KQ KD E+ + + +S + ++ + CGK + L +L+ W + GDK+
Sbjct: 548 NEKQEKDKEMLELAVPEQWEKL--YRSRDSIVNYANPEFCGKWKVLRRLLKWWHANGDKV 605
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+FS+SVR+L +L+ Y+ S LDGS R +VDDFNS+P + VFLISTR+GG
Sbjct: 606 LVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSNPRQFVFLISTRSGG 665
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLN+ SAN+VVI DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+Y
Sbjct: 666 VGLNITSANKVVIVDPNWNPSHDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIY 725
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHEE 711
KQQ +NI + E+RYF+GVQ+ K+ +GELFG+ NLF + N+ +I+ + +
Sbjct: 726 KQQQANIGYNASSERRYFKGVQEKKDQKGELFGLDNLFEYKNQNILLRDIVNKTNVAESK 785
Query: 712 QGQQ------QERHHCTNQGFKGLETHIVSSKDSNTLLST-GSKTRKSSDPEMARTSKP- 763
G Q + ++Q F G S D+N ++S + R D E P
Sbjct: 786 AGVQVMDIDVDYDPNVSDQTFTG------KSDDTNEVMSQLAAMIRGEDDEEPTHPQTPI 839
Query: 764 ---------LLEDMGIVYAHRNDDIV 780
+L G+ Y H N++++
Sbjct: 840 NTKHDPIQAILAGAGVEYTHLNNEVI 865
>gi|145238522|ref|XP_001391908.1| DNA excision repair protein (Rad26L) [Aspergillus niger CBS 513.88]
gi|134076397|emb|CAK48215.1| unnamed protein product [Aspergillus niger]
Length = 1013
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/686 (37%), Positives = 387/686 (56%), Gaps = 43/686 (6%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 229 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 288
Query: 184 -ESSDSTILKDNKVDKKGY------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ + G+ LI+CP ++++NW E +RW ++ YHG N+++
Sbjct: 289 GDERDAKRMR--KMRRSGHDQWYPRTLIVCPGTLLKNWMAELARWGWWHFDTYHGENKEL 346
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + +E+LIT++ +Y + ++ V+W+ VI DE H +K KS+ A +
Sbjct: 347 ALQAARSGRLEILITTYSTYLHNKDAINMVDWDCVIADECHIIKERKSETTKAMNMINAL 406
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG LG +++ EPLK GQ A +R A
Sbjct: 407 CRIGLTGTAIQNKYEELWTLLNWTNPGKLGPVTVWKKTISEPLKIGQSHDATVHQLRRAR 466
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ LV +L ++ LRR K I + K D VVFC ++D Q AY +L +
Sbjct: 467 TTAKKLVENLLPQFFLRRMKT-LIADQLPKKVDRVVFCPLTDTQADAYVNILGSDMASYI 525
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ PC CGS CC++ G + V P + LQ++SNHL ++ P D
Sbjct: 526 KHSTDPCDCGSRQKAGWCCRQFLP-SGVTWRSY--VFPAIAVLQKLSNHLAILIPQGVDS 582
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+KQ KD E+ + + +S + ++ + CGK + L +L+ W + GDK+
Sbjct: 583 NEKQEKDKEMLELAVPEQWEKL--YRSRDSIVNYANPEFCGKWKVLRRLLKWWHANGDKV 640
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+FS+SVR+L +L+ Y+ S LDGS R +VDDFNS+P + VFLISTR+GG
Sbjct: 641 LVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSNPRQFVFLISTRSGG 700
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLN+ SAN+VVI DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+Y
Sbjct: 701 VGLNITSANKVVIVDPNWNPSHDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIY 760
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHEE 711
KQQ +NI + E+RYF+GVQ+ K+ +GELFG+ NLF + N+ +I+ + +
Sbjct: 761 KQQQANIGYNASSERRYFKGVQEKKDQKGELFGLDNLFEYKNQNILLRDIVNKTNVAESK 820
Query: 712 QGQQ------QERHHCTNQGFKGLETHIVSSKDSNTLLST-GSKTRKSSDPEMARTSKP- 763
G Q + ++Q F G S D+N ++S + R D E P
Sbjct: 821 AGVQVMDIDVDYDPNVSDQTFTG------KSDDTNEVMSQLAAMIRGEDDEEPTHPQTPI 874
Query: 764 ---------LLEDMGIVYAHRNDDIV 780
+L G+ Y H N++++
Sbjct: 875 NTKHDPIQAILAGAGVEYTHLNNEVI 900
>gi|449513862|ref|XP_004174948.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Taeniopygia guttata]
Length = 1156
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/594 (40%), Positives = 357/594 (60%), Gaps = 21/594 (3%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P LS +G++ +P +IN L ++QREG +FLY+ Y NK G ILGDDMGLGKTIQ
Sbjct: 94 PGVAFKLSDNGDF----IPYTINRYLRDYQREGAQFLYRHYANKRGCILGDDMGLGKTIQ 149
Query: 172 TIAFLAAVFGKDESSDS-----------TILKDNKVDKKGYVLIICPSSVIQNWEIEFSR 220
I+FLAAV K + + T+ K + + K LI+ P SV+ NW+ E
Sbjct: 150 VISFLAAVLHKKGTREDVENNMPEFLLRTMKKGSDCNPKKTFLIVAPLSVLYNWKDELDT 209
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W F VS+ HG +D + +++ EV +T+++ R++ + + W VIVDEAHR+K
Sbjct: 210 WGYFKVSVLHGSKKDDDMNRIKQGKCEVALTTYEILRLYLDEFNSIEWSAVIVDEAHRIK 269
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N K+++ LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++
Sbjct: 270 NPKAQITQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRVHFKKKFSDPVE 329
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
HGQR TA +R + + L ++ + LRRTK I + KED +VFC++++ QK
Sbjct: 330 HGQRHTATKRELATGRKAMVKLARIMSGWFLRRTKA-LISDQLPKKEDRMVFCSLTEFQK 388
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
Y+ +L+ ++ ++ PCSC S + CC + N G L L+ LQ+
Sbjct: 389 AVYQAVLETDDVTLVLRAGEPCSCNSGQKRKNCCYKA-NAHG--ETIKSLRFSYLMILQK 445
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRA 520
++NH L++ + + ++ + S VF D V +++ +F +SD K GKM+
Sbjct: 446 VANHAALLQTDNTSKL-QEVHIKRVCSQVFSSFPDFVQL-SKDAAFETISDPKYSGKMKV 503
Query: 521 LEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS 580
L++L+ + DK+LLFS+S ++LD+LE++ + G + RLDG+T S R +V +FNS
Sbjct: 504 LQQLLNHFQKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRIRIVREFNS 563
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ L+ST AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V VFRL+
Sbjct: 564 LQEINICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQHRAVKVFRLI 623
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
S G++EE++Y RQVYKQQL + + +RYFE VQ KE QGELFGI NLF+
Sbjct: 624 SLGTVEEIMYLRQVYKQQLHCAVIGTENARRYFEAVQGSKEHQGELFGIHNLFK 677
>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Monodelphis domestica]
Length = 1204
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/610 (40%), Positives = 362/610 (59%), Gaps = 22/610 (3%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
P LS+DG I +P +IN L ++QREG +FLY Y G ILGDDMGLGKT+
Sbjct: 114 SPTVAFKLSEDG----ICIPYTINRYLRDYQREGAQFLYGHYSLGRGCILGDDMGLGKTV 169
Query: 171 QTIAFLAAVFGK-------DESSDSTILKDNKVDK-----KGYVLIICPSSVIQNWEIEF 218
Q IAFLAAV K + + +LK+ K + K LI+ P SV+ NW+ E
Sbjct: 170 QVIAFLAAVLRKKGTRKDIENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDEL 229
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+ W F V+I HG +D L +++ E+ +T++++ R+ L+ + W +IVDEAHR
Sbjct: 230 NTWGYFKVTILHGNKKDNELNRIKQGKCEIALTTYETLRLCLDDLNSIEWSAIIVDEAHR 289
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+KN K+++ LK RIGLTGTI+QN + EL+ + DW PG LG+ +F++ + +P
Sbjct: 290 IKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAMPGLLGSMTYFKKQFSDP 349
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
++HGQR TA +R + + Q L + + LRRTK I + KED +V+C++++
Sbjct: 350 VEHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTEF 408
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
QK Y+ +L+ ++ ++ PC+C S + CC + ++ L L L
Sbjct: 409 QKAVYQTVLETEDVTLILRAREPCTCHSGRKRKNCCYKTNSYGETVKA---LYFSYLAIL 465
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q++SNH L++ + ++ + + VF D + +++ +F +SD K GKM
Sbjct: 466 QKVSNHAALLQASSNTSKQQETHLKRICNQVFSKFKDFMQ-KSKDAAFETISDPKYSGKM 524
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L++L+ DK+LLFS+S ++LD+LE++ + G + RLDGST S R +V +F
Sbjct: 525 KVLQQLLNHCKKNRDKVLLFSFSTKLLDVLEQYCMATGLDYRRLDGSTKSEERVKIVKEF 584
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS+ + L+ST AGGLGLN V AN VVIFDP WNPA DLQA DR++R GQ R V VFR
Sbjct: 585 NSTQDINICLVSTMAGGLGLNFVGANVVVIFDPTWNPANDLQAIDRAYRIGQCRDVKVFR 644
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L+S G++EE++Y RQVYKQQL + V + KRYFE VQ KE QGELFGI NLF+ S
Sbjct: 645 LISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKLRSQ 704
Query: 699 -NLFTSEIIE 707
+ T +I+E
Sbjct: 705 GSCLTRDILE 714
>gi|389624063|ref|XP_003709685.1| helicase [Magnaporthe oryzae 70-15]
gi|351649214|gb|EHA57073.1| helicase [Magnaporthe oryzae 70-15]
gi|440466607|gb|ELQ35866.1| helicase [Magnaporthe oryzae Y34]
gi|440482590|gb|ELQ63065.1| helicase [Magnaporthe oryzae P131]
Length = 1103
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/601 (41%), Positives = 357/601 (59%), Gaps = 18/601 (2%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P+E + L + +PA I L ++Q +GV F+++ + + G ILGDDMGLGKT+Q
Sbjct: 173 PYEDVELERSAGI----IPAPIAQYLRDYQVDGVSFMHEAFVYQRGCILGDDMGLGKTVQ 228
Query: 172 TIAFLAAVFGK--DESSDSTILKDNKVDKKGY-VLIICPSSVIQNWEIEFSRWSTFNVSI 228
AFL A FGK D + K ++ ++ Y VL++CPSSV++NW E +RW + V
Sbjct: 229 VAAFLTAAFGKTGDFRDSKRMRKVKRLGRRYYKVLVVCPSSVMENWRQELARWGWWKVES 288
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
YHGP +D +L+ ++ +EV++T+ +YR+ ++ V+W+ V+VDE H +K +S++
Sbjct: 289 YHGPGKDDVLDTAKSGRLEVMLTTPATYRLQKERVNTVSWDAVVVDECHNIKERRSEITK 348
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
A E+ RIGLTGT +QNK EL+ L +W PG GT ++ PL GQ A
Sbjct: 349 AMTEVNALCRIGLTGTAIQNKYEELWTLLNWTNPGRFGTFGEWKTSISRPLTLGQSHNAT 408
Query: 349 ERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
+ + +A + + LV +L Y LRR K I H + K D VVFC ++DLQ AY R +
Sbjct: 409 LQELSMARKTAKKLVQNLLPDYFLRRMKS-LIAHQLPKKRDRVVFCPLTDLQTTAYERFI 467
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVEC-CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
E++ + C CGS + C K L++ + LV PC++ LQ ++NHL
Sbjct: 468 ASEEVELVRRSHELCDCGSGEKRGHCHYKHLEDGRTWN----MLVFPCILTLQNLANHLT 523
Query: 467 LIKPNPRDEPDKQRKD-AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
LI P + DK K A L V PD ++ I + D + CGK R L+ L+
Sbjct: 524 LIVPKIGEPGDKAEKSLARLRICV--PDKWEQLYKLRDSPLIQM-DPEFCGKWRVLKDLL 580
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
W GDK+L+FS+SV++L +L YS+S LDGS RQ +VDDFNS P +
Sbjct: 581 KFWEGNGDKVLVFSHSVKLLQVLRALFQTTHYSYSYLDGSLAIEERQQIVDDFNSDPQQF 640
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
VFLIST+AGG+GLN+ SAN+VVIFDP+WNP+ DLQAQDR++R GQ R V VFRL+S G++
Sbjct: 641 VFLISTKAGGVGLNITSANKVVIFDPHWNPSWDLQAQDRAYRIGQTRDVDVFRLVSQGTI 700
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
EE+VY RQ+YKQQ +NI + E+RYF GVQ +GE+FG+ N+F D + +I
Sbjct: 701 EEIVYARQIYKQQQANIGYNASNERRYFTGVQQDNSRKGEIFGLENIFTFRPDRVVLRDI 760
Query: 706 I 706
+
Sbjct: 761 V 761
>gi|443895463|dbj|GAC72809.1| transcription-coupled repair protein CSB/RAD26 [Pseudozyma
antarctica T-34]
Length = 1097
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/716 (40%), Positives = 394/716 (55%), Gaps = 71/716 (9%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PLVL P IQVPA+IN L +QR+GV+FLY+ Y G +LGDDMGLGKTIQ IA
Sbjct: 255 PLVLG-----PGIQVPAAINRFLRSYQRDGVRFLYRSYAQNRGALLGDDMGLGKTIQVIA 309
Query: 175 FLAAVFGK-----DESSDSTILKDNKVDKKGY---------VLIICPSSVIQNWEIEFSR 220
FL+A+ K DE+ ++ ++ + GY LIICPSSVI NW E
Sbjct: 310 FLSAIMLKTGGENDENRRIEAVRSDR-QRAGYHCANAVWPTCLIICPSSVIDNWRHELDT 368
Query: 221 WSTFNVSIYHGPN-RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
W F + + G ++ LE +++L+TS ++ + L ++N+ V++DEAH+L
Sbjct: 369 WGYFEHAAFSGARAKEEALESFRRGRLDILVTSHETASLSIEQLRDLNFSCVLIDEAHKL 428
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
KN S++ A + + R LTGT +QN ELY L DW PG LGT + + ++PL
Sbjct: 429 KNPASQMTQAMQTFRCKVRFALTGTAIQNSYRELYTLADWTNPGLLGTVKEWITEIEDPL 488
Query: 340 KHGQRLTA-PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
KHGQ+ A PER I A R + LV VL + LRRTK I + K D +VFC ++
Sbjct: 489 KHGQKRGADPER-IADARTRAEKLVQNVLPIFFLRRTKA-LIADQLPRKFDKIVFCPLTP 546
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCG--SPLTQV-----ECCKRLDNLDGCDSCPFCL 450
Q YRR+L PE+ + + PC CG P T + CC + D G +
Sbjct: 547 TQLEVYRRILAEPEVDLMKHHADPCPCGRIDPDTGLAYRRQNCCFKRDGAGGAWNKN--- 603
Query: 451 VLPCLVKLQQISNHLELIKPNPRD----EPDKQ-RKDAELASA--VFGPDIDLVGGNAQN 503
+L + LQ+ SNH+ L+ P+P D +PD+ R + +L+ +F L NA N
Sbjct: 604 MLKYVYLLQKCSNHVALVFPDPEDLSSRDPDRMDRYERQLSYVQLMFPDSWQLKRCNATN 663
Query: 504 ESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLD 563
G+ D + CGK + L +L+ W + GDK+LLFS ++R+L +E FL R+G+SF RLD
Sbjct: 664 ----GM-DPELCGKWKVLARLLQQWHADGDKVLLFSTNLRLLQFIEFFLAREGHSFVRLD 718
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
GSTP RQ LVD FN S VFLIST AGG GLNL +ANRVV+FDP+WNP+ DLQA D
Sbjct: 719 GSTPQPRRQQLVDQFNRDGSIFVFLISTTAGGTGLNLTAANRVVVFDPHWNPSHDLQAMD 778
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQ 683
R++RFGQ R V V+RL+ AGSLEE+VY RQ+YKQQ I + E+RYFEGV +
Sbjct: 779 RAYRFGQTRDVFVYRLIGAGSLEEVVYGRQLYKQQQMEIGYNATKERRYFEGVAGDQGSL 838
Query: 684 GELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLL 743
GELFG NLF +L II ++ E + Q K S D+ L
Sbjct: 839 GELFGCKNLFTLHESSLAMKSII----DECNISEVTYALAQYLKTGSLDDQVSADA--AL 892
Query: 744 STGSKTRKSSDPEMARTSKP------------------LLEDMGIVYAHRNDDIVN 781
+ + KSS PE A+ +P +LE GI Y+H + +V
Sbjct: 893 VQRAHSPKSSPPESAQRQEPGGATMALPTAADTDPIRGILEGSGISYSHDHAALVG 948
>gi|326473181|gb|EGD97190.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818]
Length = 1019
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 294/813 (36%), Positives = 433/813 (53%), Gaps = 63/813 (7%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F HT P +E + L Y + +PA I L +Q EGV FL++L+ + GGILGDD
Sbjct: 199 FSHTKPSRKYEDVQLP----YSLGLIPAPIAQWLRNYQVEGVAFLHELFVYQKGGILGDD 254
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEF 218
MGLGKT+Q IAFL A +GK DE + K + + + LI+CP ++IQNW EF
Sbjct: 255 MGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRKGEYAWYPRTLIVCPGTLIQNWRDEF 314
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
RW ++V +YHG ++D L+ + E+LIT++ +YR++ ++ V W+ VI DE H
Sbjct: 315 DRWGWWHVDVYHGDSKDAALKSAASGRAEILITTYTTYRLNRGAVNMVEWDCVIADECHI 374
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+K+ KS+ A EL RIGLTGT +QNK EL+ L +W PG G ++ EP
Sbjct: 375 IKDRKSETAKAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGRFGPISTWKSTICEP 434
Query: 339 LKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
LK GQ A + A + + LV +L + LRR K I + K D VVFC +++
Sbjct: 435 LKVGQSHDATIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPLTE 493
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
Q AY L + + N CSCGS CC+ G V P +
Sbjct: 494 TQSDAYENFLDSDIVDYIKNSSDYCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAISN 550
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD----IDLVGGNAQNESFIGLSDVK 513
LQ+ISNHL ++ P P D DKQ KD E+ PD I G S + S+ +
Sbjct: 551 LQKISNHLAILIPQPMDPKDKQAKDLEMLQVAV-PDQWREIYRTRG-----SIMNYSNPE 604
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
CGK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R +
Sbjct: 605 FCGKWKVLKKLLKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSN 664
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+V+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R
Sbjct: 665 IVNAFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRD 724
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF
Sbjct: 725 VEVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLANLF 784
Query: 694 RDLSDNLFTSEIIE----SHEEQGQQ-----QERHHCTNQGFKGLETHIVSSKDSN---T 741
++N+ +I+ + + G Q ER + G + +S+ D N
Sbjct: 785 EYQNNNVVLRDIVNKTNIAESKAGVQVIDFEMEREQSQSDYDGGDDKIDLSTPDENDDPA 844
Query: 742 LLSTGSKTRKSSDPEMARTSKPLLE---------DMGIVYAHRNDDIVNK---QPGFQRK 789
+ + R E + P+L+ G+ Y H N +++ + R+
Sbjct: 845 MSQLAALVRGEGLAEENKKVAPILKHDPIQAILAGAGVEYTHENTEVIGSSKIEAQLSRR 904
Query: 790 KE-----ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY------SLLAR 838
E + I ++ RP K ++L +S A+ K R E ++ AR
Sbjct: 905 AELVNDGDEIGEEQVFRPESREGKPASILVRGRNGQS-ATFKYRPPPEVMKRQFCTMAAR 963
Query: 839 FMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
+ DV EF+ + T + R L+++ K ++
Sbjct: 964 YGFRDVTEFALTVEGLTSAQRRTWLENWYKERR 996
>gi|121710388|ref|XP_001272810.1| DNA excision repair protein (Rad26L), putative [Aspergillus
clavatus NRRL 1]
gi|119400960|gb|EAW11384.1| DNA excision repair protein (Rad26L), putative [Aspergillus
clavatus NRRL 1]
Length = 1011
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 355/602 (58%), Gaps = 16/602 (2%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
G +E + L Y + +PA + L ++Q +G FL++L+ + GGILGDDMGLGKT+
Sbjct: 216 GKYEDITLP----YSLGLIPAPVAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTV 271
Query: 171 QTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFN 225
Q IAFL A +GK DE + K + + + LI+CP ++IQNW+ EF+RW ++
Sbjct: 272 QVIAFLTAAYGKTGDERDAKRMRKMRRSGQDRWYPRTLIVCPGTLIQNWKSEFNRWGWWH 331
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V YHG N+++ L+ + VE+LIT++ +Y + ++ V+W+ V+ DE H +K S+
Sbjct: 332 VDTYHGDNKELALQAARSGRVEILITTYGTYLHNKDAVNMVDWDCVVADECHIIKERSSE 391
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
A + RIGLTGT +QNK EL+ L +W PG LG +R EPL+ GQ
Sbjct: 392 TTKAMNMINALCRIGLTGTAIQNKYEELWTLLNWTNPGKLGPVTTWRRTISEPLRIGQSH 451
Query: 346 TAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
A + A + + LV +L ++ LRR K I + K D VVFC ++D Q AY
Sbjct: 452 DATLYQLSKARKTAKKLVENLLPQFFLRRMKT-LIADQLPKKSDRVVFCPLTDTQASAYE 510
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
+L IQ + C CGS CC++ G V P + LQ++SNH
Sbjct: 511 NILDSDIIQYIKASTDKCDCGSGKKAGWCCRKFLPSGGQWQN---YVFPAIAILQKLSNH 567
Query: 465 LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
L + D +KQ KD E+ + + +S + ++ + CGK + L KL
Sbjct: 568 LAALITQGSDSYEKQEKDKEMLEIAVPDQWEQL--YRTRDSIVNYANPEFCGKWKVLRKL 625
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ W + GDK+L+FS+SVR+L +L+ Y+ S LDGS R +VDDFNS P +
Sbjct: 626 LKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMSYEERTKVVDDFNSDPKQ 685
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLISTR+GG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R+V VFRL+SAG+
Sbjct: 686 FVFLISTRSGGVGLNITSANKVVVVDPNWNPSHDLQAQDRAYRIGQSRNVEVFRLISAGT 745
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+ +
Sbjct: 746 IEEIVYARQIYKQQQANIGYNASSERRYFKGVQEKKDQKGEIFGLNNLFEFQNNNIVLRD 805
Query: 705 II 706
I+
Sbjct: 806 IV 807
>gi|449278270|gb|EMC86176.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Columba livia]
Length = 684
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/610 (40%), Positives = 364/610 (59%), Gaps = 26/610 (4%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P LS G++ +P +IN L ++QREG +FLY+ Y NK G ILGDDMGLGKTIQ
Sbjct: 86 PAVAFKLSDSGDF----IPYTINRYLRDYQREGAQFLYRHYANKRGCILGDDMGLGKTIQ 141
Query: 172 TIAFLAAVFGKDESSDS-----------TILKDNKVDKKGYVLIICPSSVIQNWEIEFSR 220
I+FLAAV K + + T+ K++K + K LI+ P SV+ NW+ E
Sbjct: 142 VISFLAAVLHKKGTREDIENNMPEFLLRTMKKESKCNPKKTFLIVAPLSVLYNWKDELDT 201
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W F V + HG +D L +++ EV +T+++ R++ + V W VIVDEAHR+K
Sbjct: 202 WGYFKVCVLHGSKKDDDLNRIKQGKCEVALTTYEILRLYLDEFNSVEWSAVIVDEAHRIK 261
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N K+++ LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++
Sbjct: 262 NPKAQITQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKKFSDPVE 321
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
HGQR TA +R + + L + + LRRTK I + KED +V+C++++ QK
Sbjct: 322 HGQRHTATKRELATGRKAMVKLARKMSGWFLRRTKA-LISDQLPKKEDRMVYCSLTEFQK 380
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
Y+ +L+ ++ ++ PCSC S + CC ++ N G L L L++
Sbjct: 381 AVYQAVLETEDVSLVLRAGEPCSCNSGRRRKNCCYKV-NAHG--ETIKSLRFSYLTILRK 437
Query: 461 ISNHLELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
++NH L++ D KQ++ + + VF D V +++ +F +SD K GKM
Sbjct: 438 VANHAALLQT---DNTSKQQEAHIKRVCAQVFSSFPDFVQL-SKDAAFETISDPKYSGKM 493
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L++L+ + DK+LLFS+S ++LD+LE++ + G + RLDG+T S R +V +F
Sbjct: 494 KVLQQLLNHFRRNRDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRTRIVREF 553
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS+ + L+ST AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ + V VFR
Sbjct: 554 NSTQEINICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQYKAVKVFR 613
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLS 697
L+S G++EE++Y RQVYKQQL V + KRYFE VQ KE QGELFGI NLF+
Sbjct: 614 LISLGTVEEMMYLRQVYKQQLHCAVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKLRTH 673
Query: 698 DNLFTSEIIE 707
+ T EI+E
Sbjct: 674 GSCLTKEILE 683
>gi|326477646|gb|EGE01656.1| DNA excision repair protein [Trichophyton equinum CBS 127.97]
Length = 1019
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 293/811 (36%), Positives = 433/811 (53%), Gaps = 59/811 (7%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F HT P +E + L Y + +PA I L +Q EGV FL++L+ + GGILGDD
Sbjct: 199 FSHTKPSRKYEDVQLP----YSLGLIPAPIAQWLRNYQVEGVAFLHELFVYQKGGILGDD 254
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEF 218
MGLGKT+Q IAFL A +GK DE + K + + + LI+CP ++IQNW EF
Sbjct: 255 MGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRKGEYAWYPRTLIVCPGTLIQNWRDEF 314
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
RW ++V +YHG ++D L+ + E+LIT++ +YR++ ++ V W+ VI DE H
Sbjct: 315 DRWGWWHVDVYHGDSKDAALKSAASGRAEILITTYTTYRLNRGAVNMVEWDCVIADECHI 374
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+K+ KS+ A EL RIGLTGT +QNK EL+ L +W PG G ++ EP
Sbjct: 375 IKDRKSETAKAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGRFGPISTWKSTICEP 434
Query: 339 LKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
LK GQ A + A + + LV +L + LRR K I + K D VVFC +++
Sbjct: 435 LKVGQSHDATIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPLTE 493
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
Q AY L + + N CSCGS CC+ G V P +
Sbjct: 494 TQSDAYENFLDSDIVDYIKNSSDYCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAISN 550
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSC 515
LQ+ISNHL ++ P P D DKQ KD E+ PD +L S + S+ + C
Sbjct: 551 LQKISNHLAILIPQPMDPKDKQAKDLEMLQVAV-PDQWRELYRTRG---SIMNYSNPEFC 606
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R ++V
Sbjct: 607 GKWKVLKKLLKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIV 666
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V
Sbjct: 667 NAFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRDVE 726
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRD 695
VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF
Sbjct: 727 VFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLANLFEY 786
Query: 696 LSDNLFTSEIIE----SHEEQGQQ-----QERHHCTNQGFKGLETHIVSSKDSN---TLL 743
++N+ +I+ + + G Q ER + G + +S+ D N +
Sbjct: 787 QNNNVVLRDIVNKTNIAESKAGVQVIDFEMEREQSQSDYDGGDDKIDLSTPDENDDPAMS 846
Query: 744 STGSKTRKSSDPEMARTSKPLLE---------DMGIVYAHRNDDIVNK---QPGFQRKKE 791
+ R E + P+L+ G+ Y H N +++ + R+ E
Sbjct: 847 QLAALVRGEGLAEENKKVAPILKHDPIQAILAGAGVEYTHENTEVIGSSKIEAQLSRRAE 906
Query: 792 -----ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY------SLLARFM 840
+ I ++ RP K ++L +S A+ K R E ++ AR+
Sbjct: 907 LVNDGDEIGEEQVFRPESREGKPASILVRGRNGQS-ATFKYRPPPEVMKRQFCTMAARYG 965
Query: 841 GMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
DV EF+ + T + R L+++ K ++
Sbjct: 966 FRDVTEFALTVEGLTSAQRRTWLENWYKERR 996
>gi|302667167|ref|XP_003025174.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517]
gi|291189264|gb|EFE44563.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517]
Length = 1020
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 295/813 (36%), Positives = 438/813 (53%), Gaps = 63/813 (7%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F H P +E + L Y + +PA I L +Q EGV FL++L+ + GGILGDD
Sbjct: 199 FSHVKPSRKYEDVQLP----YSLGLIPAPIAQWLRNYQVEGVGFLHELFVYQKGGILGDD 254
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEF 218
MGLGKT+Q IAFL A +GK DE + K + + + LI+CP ++IQNW EF
Sbjct: 255 MGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRKGEYAWYPRTLIVCPGTLIQNWRDEF 314
Query: 219 SRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
RW ++V +YHG ++D L+ + E+LIT++ +YR++ S ++ V W+ VI DE H
Sbjct: 315 DRWGWWHVDVYHGDSKDAALKSAASGRAEILITTYTTYRLNRSAVNMVEWDCVIADECHI 374
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+K+ KS+ A EL RI LTGT +QNK EL+ L +W PG G ++ EP
Sbjct: 375 IKDRKSETAKAMNELNALCRIELTGTAIQNKYEELWTLLNWTNPGKFGPISTWKSTICEP 434
Query: 339 LKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
LK GQ A + A + + LV +L + LRR K I + K D VVFC +++
Sbjct: 435 LKVGQSHDATIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPLTE 493
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
Q AY L + + N CSCGS CC+ G V P +
Sbjct: 494 TQSDAYENFLDSDIVDYIKNSSDYCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAISN 550
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSC 515
LQ+ISNHL ++ P P D DKQ KD E+ PD +L S + S+ + C
Sbjct: 551 LQKISNHLAILIPQPMDPKDKQAKDLEMLQVAV-PDQWRELYRTRG---SIMNYSNPEFC 606
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R ++V
Sbjct: 607 GKWKVLKKLLKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIV 666
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V
Sbjct: 667 NAFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRDVE 726
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRD 695
VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF
Sbjct: 727 VFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLANLFEY 786
Query: 696 LSDNLFTSEIIE----SHEEQGQQ-----QERHHCTNQGFKGLETHI-VSSKDSNTLLST 745
++N+ +I+ + + G Q ER + + G++ + +S+ D N L+
Sbjct: 787 QNNNVVLRDIVNKTNIAESKAGVQVIDFEMEREQ-SQSDYDGVDDKLNLSTPDENDDLAM 845
Query: 746 ---GSKTRKSSDPEMARTSKPLLE---------DMGIVYAHRNDDIVNK---QPGFQRKK 790
+ R PE + P+L+ G+ Y H N +++ + R+
Sbjct: 846 SQLAALVRGEGLPEENKKLAPILKHDPIQAILAGAGVEYTHENTEVIGSSKIEAQLSRRA 905
Query: 791 E-----ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASS-KDRKNIEY------SLLAR 838
E E I ++ RP K ++ GK L+++ K R E ++ AR
Sbjct: 906 ELVNDGEEIGEEQVFRPESREGKPASIQ--VRGKNGLSATFKYRPPPEVMKRQFCTMAAR 963
Query: 839 FMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
+ DV EF+ + T + R L+++ K ++
Sbjct: 964 YGFRDVTEFALTVEGLTSAQRRTWLENWYKERR 996
>gi|302502981|ref|XP_003013451.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371]
gi|291177015|gb|EFE32811.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371]
Length = 1019
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 295/814 (36%), Positives = 438/814 (53%), Gaps = 65/814 (7%)
Query: 107 FDHTGP---FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
F H P +E + L Y + +PA I L +Q EGV FL++L+ + GGILGDD
Sbjct: 199 FSHVKPSRKYEDVQLP----YSLGLIPAPIAQWLRNYQVEGVGFLHELFVYQKGGILGDD 254
Query: 164 MGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEI 216
MGLGKT+Q IAFL A +GK + D+ ++ K+ +KG LI+CP ++IQNW
Sbjct: 255 MGLGKTVQVIAFLTAAYGKTGDERDAKRMR--KMRRKGECAWYPRTLIVCPGTLIQNWRD 312
Query: 217 EFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
EF RW ++V +YHG ++D L+ + E+LIT++ +YR++ S ++ V W+ VI DE
Sbjct: 313 EFDRWGWWHVDVYHGDSKDAALKSAASGRAEILITTYTTYRLNRSAVNMVEWDCVIADEC 372
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
H +K+ KS+ A EL RIGLTGT +QNK EL+ L +W PG G ++
Sbjct: 373 HIIKDRKSETAKAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGQFGPISTWKSTIC 432
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
EPLK GQ A + A + + LV +L + LRR K I + K D VVFC +
Sbjct: 433 EPLKVGQSHDATIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPL 491
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
++ Q AY L + + N CSCGS CC+ G V P +
Sbjct: 492 TETQSDAYENFLDSDIVDYIKNSSDYCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAI 548
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVK 513
LQ+ISNHL ++ P P D DKQ KD E+ PD +L S + S+ +
Sbjct: 549 SNLQKISNHLAILIPQPMDPKDKQAKDLEMLQVAV-PDQWRELYRTRG---SIMNYSNPE 604
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
CGK + L+KL+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R +
Sbjct: 605 FCGKWKVLKKLLKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSN 664
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+V+ FNS P + VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R
Sbjct: 665 IVNAFNSDPRQFVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRD 724
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF
Sbjct: 725 VEVFRLVSAGTIEEIVYARQIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLANLF 784
Query: 694 RDLSDNLFTSEIIE----SHEEQGQQ-----QERHHCTNQGFKGLETHI-VSSKDSNTLL 743
++N+ +I+ + + G Q ER + + + G++ + +S+ D N L
Sbjct: 785 EYQNNNVVLRDIVNKTNIAESKAGVQVIDFEMEREQ-SQRDYDGVDDKLNLSTPDENDDL 843
Query: 744 STGSKTRKSSDPEMARTSKPL------------LEDMGIVYAHRNDDIVNK---QPGFQR 788
+ +A +K L L G+ Y H N +++ + R
Sbjct: 844 AMSQLAALVRGEGLAEENKKLAPILKHDPIQAILAGAGVEYTHENTEVIGSSKIEAQLSR 903
Query: 789 KKE-----ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY------SLLA 837
+ E E I ++ RP K ++ +S A+ K R E ++ A
Sbjct: 904 RAELVNDGEEIGEEQVFRPESREGKPASIQVRGKNGQS-ATFKYRPPPEVMKRQFCTMAA 962
Query: 838 RFMGMDVFEFSKWILSATPSAREKLLQDYRKRKK 871
R+ DV EF+ + T + R L+++ K ++
Sbjct: 963 RYGFRDVTEFALTVEGLTSAQRRTWLENWYKERR 996
>gi|159128918|gb|EDP54032.1| DNA excision repair protein (Rad26L), putative [Aspergillus
fumigatus A1163]
Length = 1008
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/730 (35%), Positives = 395/730 (54%), Gaps = 51/730 (6%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQR 142
FDD E ++ E F + + + G +E + L Y + +PA I L +Q
Sbjct: 191 FDDVEFSDDERLE-FLKEKPAFRNIEPCGKYEDITLP----YSLGLIPAPIAQWLRPYQV 245
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKG 200
EG FL++L+ + GGILGDDMGLGKT+Q I FL A +GK DE + K + + G
Sbjct: 246 EGAAFLHELFVYQKGGILGDDMGLGKTVQVITFLTAAYGKTGDERDAKRMRKMRRSGRDG 305
Query: 201 Y---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYR 257
+ LI+CP ++IQNW EF+RW ++V YHG N+++ L+ + +E+LIT++ +Y
Sbjct: 306 WYPRTLIVCPGTLIQNWISEFNRWGWWHVDTYHGDNKELALQAARSGRLEILITTYGTYL 365
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+ ++ V W+ V+ DE H +K S+ A + RIGLTGT +QNK EL+ L
Sbjct: 366 HNKDAVNMVEWDCVVADECHIIKERSSETTKAMNVVNALCRIGLTGTAIQNKYEELWTLL 425
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKE 376
+W PG LG ++ EPLK GQ A + A + + LV +L ++ LRR K
Sbjct: 426 NWTNPGKLGPVTTWKRTISEPLKIGQSHDATLYQLSKARKTAKKLVENLLPQFFLRRMKT 485
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
I + K D VVFC +++ Q AY +L +Q + C CGS CC++
Sbjct: 486 -LIADQLPKKSDRVVFCPLTETQASAYENILDSDIVQYIKTSSDKCDCGSGKKAGWCCRQ 544
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
G V P + LQ++SNHL + P D +KQ KD E+ +
Sbjct: 545 FLPSGGRWQN---YVFPAIAILQKLSNHLATLIPQGADSLEKQEKDKEMLEIAVPDQWEQ 601
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG 556
+ +S + ++ + CGK + L KL+ W + GDK+L+FS+SVR+L +L+
Sbjct: 602 L--YRTRDSIVNYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTS 659
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
Y+ S LDGS R +VD+FNS P + VFLISTR+GG+GLN+ SAN+VV+ DPNWNP+
Sbjct: 660 YNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITSANKVVVVDPNWNPS 719
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGV 676
DLQAQDR++R GQ R+V VFRL+S G++EE+VY RQ+YKQQ +NI + E+RYF+GV
Sbjct: 720 HDLQAQDRAYRIGQSRNVEVFRLISVGTIEEIVYARQIYKQQQANIGYNASSERRYFKGV 779
Query: 677 QDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSS 736
Q+ K+ +GE+FG+ NLF ++N+ +I+ + + G + ++ I S
Sbjct: 780 QEKKDRKGEIFGLDNLFEFKTNNIVLRDIV--------NKTNVAESKAGVQVMDLAIDES 831
Query: 737 KDSNTLLSTGSKTRKSSDPEMARTS--------------------------KPLLEDMGI 770
T + + S+T+ D M++ + + +L G+
Sbjct: 832 DTKTTTVDSSSETKNQDDQVMSQLAAMIRGDADDAALQAQAAVTAQKHDPIQAILAGAGV 891
Query: 771 VYAHRNDDIV 780
Y H N++++
Sbjct: 892 EYTHLNNEVI 901
>gi|449544043|gb|EMD35017.1| hypothetical protein CERSUDRAFT_139806 [Ceriporiopsis subvermispora
B]
Length = 780
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/689 (38%), Positives = 375/689 (54%), Gaps = 61/689 (8%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
QVPASIN L ++QR+G+ F ++ Y+ GG+LGDDMGLGKTIQ I+FL+A+ K +
Sbjct: 8 QVPASINTFLRDYQRDGISFFWERYRQGQGGLLGDDMGLGKTIQVISFLSAIMKKRGNVR 67
Query: 188 STILKDNKVDKKGYV--------------------LIICPSSVIQNWEIEFSRWSTFNVS 227
+ N V V LII PSSV+ NWE EF W F V
Sbjct: 68 DVDRRRNHVSHLQDVSTRWKERRRLPYPNKTWPTCLIIAPSSVVGNWEREFETWGYFEVG 127
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
IY G R +L + ++V+ITSF++ R+ S+L ++ W +VI+DE HR+KN KS+
Sbjct: 128 IYTGAARAEVLNDFKLGRLDVVITSFETARMDISLLDDLAWSVVIIDEVHRVKNPKSRTT 187
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A + R GLTGT +QN EL+ + DW PGS+GT+ + + PL GQ +A
Sbjct: 188 TALARFSCKVRFGLTGTAIQNDYGELWTMLDWANPGSVGTKRQWEGYVVRPLTLGQSKSA 247
Query: 348 P-ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
E+ ++ A K +L K+ LRRTK+ I + K D VVFC ++ +Q Y+R+
Sbjct: 248 TDEQHVKAALVAKILTEKLLPKFFLRRTKQ-IIKDQLPKKIDQVVFCPLTSVQLAVYKRI 306
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L LP ++ L KD C CGS + +CC D D + + L +I+NHL
Sbjct: 307 LGLPAVENLTRKDELCDCGSRKARRKCCHPFDKAD---------LFKYMSTLIKIANHLA 357
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
LI P P D ++ ++ EL+ F P ++ + + + K CGK +
Sbjct: 358 LILPAPNDTEEQVIRNRELSRLAF-PQSEI------PKYITSIYNPKLCGKWKVR----- 405
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
A +K+L+F+ SV++L +L+ L + F LDGST S R L+D F++ P V
Sbjct: 406 --ADPSNKVLIFTKSVKLLQMLDFHLRNQNLGFVTLDGSTKSAERMPLIDRFHADPDIFV 463
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FLIST AGG GLNL AN+VVIFDPNWNPA DLQA DR++RFGQ R V V+RLL AGS+E
Sbjct: 464 FLISTLAGGTGLNLTGANKVVIFDPNWNPAHDLQAMDRAYRFGQTRDVSVYRLLGAGSIE 523
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
EL+Y RQ+YKQQ + + + RYFEGVQ K QGELFGI N+F+ D L T + I
Sbjct: 524 ELIYARQIYKQQQMLVGYNASFQTRYFEGVQGEKSKQGELFGIKNIFKLHEDTLATKKAI 583
Query: 707 E------------SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSD 754
E + + +G++ R + + E S + L G+
Sbjct: 584 EEASILDLDWALSNMDAKGKKASRERSSKTEWV-YEAEASGSNEYGDLRGLGALLFDDEA 642
Query: 755 PEM-ARTS--KPLLEDMGIVYAHRNDDIV 780
P + +R S + L D+G+ Y+HRN+D+
Sbjct: 643 PLVDSRDSGIQKTLNDIGVKYSHRNEDVT 671
>gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus]
Length = 1644
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/640 (39%), Positives = 374/640 (58%), Gaps = 36/640 (5%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF F+ LS++G+ +P +IN L ++
Sbjct: 71 IFDDEDLEKPYFPGRKFPSSSAVAFK-----------LSEEGD----SIPYTINRYLRDY 115
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y+ G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 116 QREGTQFLYGHYRQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRS 175
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V++ HG +D L +++ E+
Sbjct: 176 MKKELPSSMTKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELMRIKQRKCEI 235
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W +IVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 236 ALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQN 295
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + + L +
Sbjct: 296 NMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAGRMAG 355
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
LRRTK I + KED +V+C++++ QK Y+ +L+ ++ ++ PC+C S
Sbjct: 356 SFLRRTKT-LIKDQLPKKEDRMVYCSLTEFQKAVYQTVLETEDVTLILQSSKPCTCNSGR 414
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ CC + N G + CL L LQ+++NH+ L++ + + K +
Sbjct: 415 KRRSCCYKT-NSRGDEVKTLCLSY--LTVLQKVANHVALLQAASTSKQETLIK--RICDQ 469
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L
Sbjct: 470 VFSKFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRRNRDKVLLFSFSTKLLDVL 528
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN V++
Sbjct: 529 QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVIL 588
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKL 668
FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V +
Sbjct: 589 FDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQLYKQQLHCVVVGSEN 648
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE QGELFGICNLF+ S + T +I+E
Sbjct: 649 AKRYFEAVQGSKEHQGELFGICNLFKLRSQGSCLTRDILE 688
>gi|431897839|gb|ELK06673.1| Putative DNA repair and recombination protein RAD26-like protein
[Pteropus alecto]
Length = 1541
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/606 (40%), Positives = 360/606 (59%), Gaps = 25/606 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LSKDGE +P +IN L ++QREG +FLY + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSKDGE----SIPYTINRYLRDYQREGAQFLYGHFIQGRGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW E W F
Sbjct: 164 AVLHKRGTREDIENNMPEFLLRSLKKEPPLSISKKMFLIVAPLSVLYNWRDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V+I HG +D L +++ EV +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTILHGNKKDNELIRVKQRKCEVALTTYETLRLCLDDLNSLEWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQKLAKKMSGWFLRRTKT-LIKDQLPKKEDRIVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD-NLDGCDSCPFCLVLPCLVKLQQISNH 464
+L+ ++ ++ PC+C S + CC + + + L L LQ+++NH
Sbjct: 403 VLETEDVILILQSSEPCTCSSGRKRRNCCYKASISTNSRGETVKTLYFSYLAVLQKVANH 462
Query: 465 LELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ L++ KQ++ + VF D V +++ +F LSD K GKM+ LE
Sbjct: 463 VALLQAA---STSKQQETIIKRICDQVFSRFPDYVQ-KSKDAAFQTLSDPKYSGKMKVLE 518
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
+L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 519 QLLNHCRKNNDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIVKEFNSTQ 578
Query: 583 SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V VFRL+S
Sbjct: 579 DVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISL 638
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLF 701
G++EE++Y RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S +
Sbjct: 639 GTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVYNLFKLRSQGSCL 698
Query: 702 TSEIIE 707
T +I+E
Sbjct: 699 TRDILE 704
>gi|425769345|gb|EKV07840.1| DNA excision repair protein (Rad26L), putative [Penicillium
digitatum Pd1]
gi|425771117|gb|EKV09571.1| DNA excision repair protein (Rad26L), putative [Penicillium
digitatum PHI26]
Length = 1007
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/599 (40%), Positives = 353/599 (58%), Gaps = 20/599 (3%)
Query: 120 KDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
KD E P + +PASI L ++Q EGV FL+ L+ + GG+LGDDMGLGKTIQ IAFL
Sbjct: 202 KDVELPYSRGIIPASIAQWLRQYQVEGVAFLHGLFVYQKGGVLGDDMGLGKTIQVIAFLT 261
Query: 178 AVFGK--DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGP 232
A +GK DE + K + D + LI+CP ++I NW EF+RW ++V YHG
Sbjct: 262 AAYGKTGDERDAKRMRKMRRSDDSAWYPRTLIVCPGTLIANWRAEFARWGWWHVDSYHGE 321
Query: 233 NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
N+D+ L+ ++ VEVL+T++ +Y + + ++ + W+ VI DE H++K KS + E
Sbjct: 322 NKDLALDAAKSGRVEVLVTTYTTYMNNKNAVNMIEWDCVIADECHKIKERKSGTTQSMNE 381
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
+ RIGLTGT +QNK EL+ L +W PG LG ++ +PLK GQ A +
Sbjct: 382 INALCRIGLTGTAIQNKYEELWTLLNWTNPGVLGPVSSWKAQISDPLKIGQSHDATLSEL 441
Query: 353 RIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
A + LV +L ++ +RR K I + K D VVFC +++ Q AY L
Sbjct: 442 SRARRTAKKLVENLLPQFFIRRMKT-LIADQLPKKIDRVVFCPLTETQAEAYENFLDSDI 500
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVKLQQISNHLELIKP 470
+ + PC CGS CC+ L + D + V P + LQ++SNHL ++ P
Sbjct: 501 VDYIKTSTEPCDCGSGKKAGWCCRSL--IPDRDPPNWQSYVFPAINVLQKLSNHLAILIP 558
Query: 471 NPRDEPDKQRKD---AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
D +KQ KD ELA D+ +S + ++ + CGK + L KL+
Sbjct: 559 QGADPKEKQEKDRDYLELALPEQWQDL-----YRSRDSIVNYANPEFCGKWKVLRKLLKW 613
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
W S GDK+L+FS+SVR+L +L+ Y+ S LDGS R VD+FN+ + VF
Sbjct: 614 WHSNGDKVLIFSHSVRLLKMLQMLFHHTSYNVSYLDGSMSLQDRAKAVDEFNTDSRQFVF 673
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
LIST+AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE
Sbjct: 674 LISTKAGGVGLNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQLRDVEVFRLISAGTIEE 733
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+VY RQ+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ N F + N+ +I+
Sbjct: 734 IVYARQIYKQQQANIGYNASSERRYFKGVQEKKDKKGEIFGLKNFFGYQNANIVLRDIV 792
>gi|70989315|ref|XP_749507.1| DNA excision repair protein (Rad26L) [Aspergillus fumigatus Af293]
gi|66847138|gb|EAL87469.1| DNA excision repair protein (Rad26L), putative [Aspergillus
fumigatus Af293]
Length = 1008
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/630 (38%), Positives = 363/630 (57%), Gaps = 17/630 (2%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQR 142
FDD E ++ E F + + + G +E + L Y + +PA I L +Q
Sbjct: 191 FDDVEFSDDERLE-FLKEKPAFRNIEPCGKYEDITLP----YSLGLIPAPIAQWLRPYQV 245
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKG 200
EG FL++L+ + GGILGDDMGLGKT+Q I FL A +GK DE + K + + G
Sbjct: 246 EGAAFLHELFVYQKGGILGDDMGLGKTVQVITFLTAAYGKTGDERDAKRMRKMRRSGRDG 305
Query: 201 Y---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYR 257
+ LI+CP ++IQNW EF+RW ++V YHG N+++ L+ + +E+LIT++ +Y
Sbjct: 306 WYPRTLIVCPGTLIQNWISEFNRWGWWHVDTYHGDNKELALQAARSGRLEILITTYGTYL 365
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+ ++ V W+ V+ DE H +K S+ A + RIGLTGT +QNK EL+ L
Sbjct: 366 HNKDAVNMVEWDCVVADECHIIKERSSETTKAMNVVNALCRIGLTGTAIQNKYEELWTLL 425
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKE 376
+W PG LG ++ EPLK GQ A + A + + LV +L ++ LRR K
Sbjct: 426 NWTNPGKLGPVTTWKRTISEPLKIGQSHDATLYQLSKARKTAKKLVENLLPQFFLRRMKT 485
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
I + K D VVFC +++ Q AY +L +Q + C CGS CC++
Sbjct: 486 -LIADQLPKKSDRVVFCPLTETQASAYENILDSDIVQYIKTSSDKCDCGSGKKAGWCCRQ 544
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
G V P + LQ++SNHL + P D +KQ KD E+ +
Sbjct: 545 FLPSGGRWQN---YVFPAIAILQKLSNHLATLIPQGADSLEKQEKDKEMLEIAVPDQWEQ 601
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG 556
+ +S + ++ + CGK + L KL+ W + GDK+L+FS+SVR+L +L+
Sbjct: 602 L--YRTRDSIVNYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTS 659
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
Y+ S LDGS R +VD+FNS P + VFLISTR+GG+GLN+ SAN+VV+ DPNWNP+
Sbjct: 660 YNVSYLDGSMTYEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITSANKVVVVDPNWNPS 719
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGV 676
DLQAQDR++R GQ R+V VFRL+S G++EE+VY RQ+YKQQ +NI + E+RYF+GV
Sbjct: 720 HDLQAQDRAYRIGQSRNVEVFRLISVGTIEEIVYARQIYKQQQANIGYNASSERRYFKGV 779
Query: 677 QDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q+ K+ +GE+FG+ NLF ++N+ +I+
Sbjct: 780 QEKKDRKGEIFGLDNLFEFKTNNIVLRDIV 809
>gi|354505095|ref|XP_003514607.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Cricetulus griseus]
Length = 1141
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/659 (37%), Positives = 382/659 (57%), Gaps = 37/659 (5%)
Query: 63 LPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDG 122
+P Q + + +S +FDDE+ EK ++ F+ LS+DG
Sbjct: 62 IPLQRLKEVKSTKDCSRSFIFDDEDLEKPYFPDRKFPSLADAFK-----------LSEDG 110
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV K
Sbjct: 111 D----SIPYTINRYLRDYQREGAQFLYRHYIQGRGCILGDDMGLGKTIQVISFLAAVLHK 166
Query: 183 DESSDS-----------TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG 231
+ + ++ K+ + L++ P SV+ NW+ E W F V++ HG
Sbjct: 167 KGTREDIENNMPEFLLKSMKKEPSSTAQKMFLVVAPLSVLYNWKDELDTWGYFRVTVLHG 226
Query: 232 PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
+D+ L +L+ E+ +T++++ R+ L+ + W VIVDEAHR+KN K+++
Sbjct: 227 SKKDIGLLRLKQRKCEIALTTYETLRLCLEELNSLEWSAVIVDEAHRIKNPKARVTQVMK 286
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
LK + RIGLTGT++QN + EL+ + DW PG LG++ +F++ + +P++HGQR TA +R
Sbjct: 287 ALKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSKSYFKKQFSDPVEHGQRHTATKRE 346
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
+ + L + LRRTK G L KED +V+C++++ QK Y+ +L+ +
Sbjct: 347 LATGRKAMHRLAKKMSGCFLRRTKTLIKGQLPK-KEDRMVYCSLTEFQKAVYQTVLETED 405
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
+ ++ PC+CGS + CC + N G CL L LQ+++NH+ L++
Sbjct: 406 VALILQSSQPCTCGSGRKRRNCCYKT-NSQGDKVRTLCLSY--LTVLQKVANHVALLQTA 462
Query: 472 PRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWA 529
KQ++ ++ VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 463 ---STSKQQETLIKKICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFR 518
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLI 589
DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+ + L+
Sbjct: 519 KHRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTKDVNICLV 578
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
ST AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++
Sbjct: 579 STMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIM 638
Query: 650 YTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIE 707
Y RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ + T +I+E
Sbjct: 639 YLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRAQGSCLTRDILE 697
>gi|255943149|ref|XP_002562343.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587076|emb|CAP94740.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1022
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/684 (37%), Positives = 380/684 (55%), Gaps = 37/684 (5%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q EGV FL++L+ + GG+LGDDMGLGKTIQ IAFL A +GK
Sbjct: 208 YSMGIIPAPIAQWLRQYQVEGVAFLHELFVYQKGGVLGDDMGLGKTIQVIAFLTAAYGKT 267
Query: 183 -DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + D + LI+CP S+I NW+ EF+ W ++V YHG N+D+ L
Sbjct: 268 GDERDAKRMRKMRRSDDSAWYPRTLIVCPGSLIANWKAEFACWGWWHVESYHGENKDLAL 327
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ ++ VEVLIT++ +Y + + ++ + W+ VI DE H++K KS + E+ R
Sbjct: 328 DAAKSGRVEVLITTYTTYMNNKNAVNMIEWDCVIADECHKIKERKSGTTQSMNEINALCR 387
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG LG ++ EPLK GQ A + A
Sbjct: 388 IGLTGTAIQNKYEELWTLLNWTNPGVLGPLSAWKAQISEPLKIGQSHDATLSELSRARRT 447
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L ++ +RR K I + K D VVFC +++ Q AY L + +
Sbjct: 448 AKKLVENLLPQFFIRRMKT-LIADQLPKKIDRVVFCPLTETQAEAYENFLDSDIVDYIKT 506
Query: 418 KDLPCSCGSPLTQVECCKR-LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
PC C S CC++ + + D + + V P + LQ++SNHL ++ P D
Sbjct: 507 STEPCDCKSGKKAGWCCRQFIPDRDPPNWQSY--VFPAINVLQKLSNHLAILIPQGTDPK 564
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
+KQ KD + + G +S + ++ + CGK + L KL+ W S GDK+L
Sbjct: 565 EKQEKDRDYLELALPEQWE--GLYRSRDSIVNYANPEFCGKWKVLRKLLKWWHSNGDKVL 622
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
+FS+SVR+L +L+ Y+ S LDGS R VD+FN+ + VFLIST+AGG+
Sbjct: 623 IFSHSVRLLKMLQMLFHHTSYNVSYLDGSMSLQDRAKAVDEFNADSRQFVFLISTKAGGV 682
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YK
Sbjct: 683 GLNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQLRDVEVFRLISAGTIEEIVYARQIYK 742
Query: 657 QQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHEEQ 712
QQ +NI + E+RYF+GVQ+ K+ +GE+FG+ N F + N+ +I+ +
Sbjct: 743 QQQANIGYNASSERRYFKGVQERKDKKGEIFGLKNFFGYQNTNIVLRDIVNRTNVAESRA 802
Query: 713 GQQ--------QERHHCTNQGFKG-------LETHIVSSKDS-NTLLSTGSKTRKSSDPE 756
G Q +E H T++ K L I D + LS T DP
Sbjct: 803 GVQVVDVDLKAEEGHDYTDRPMKSEDEAMSQLAAMICGDDDEKDHKLSVSLPTPHKHDPV 862
Query: 757 MARTSKPLLEDMGIVYAHRNDDIV 780
A +L G+ Y H N++++
Sbjct: 863 QA-----ILAGAGVEYTHLNNEVI 881
>gi|322699637|gb|EFY91397.1| putative DNA repair protein RAD26 [Metarhizium acridum CQMa 102]
Length = 1075
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 387/706 (54%), Gaps = 45/706 (6%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+FD +P +D E P +PA I L ++Q G KFL++ + + G ILGDD
Sbjct: 143 EFDVRSGIKPSRPYRDIELPQSAGLIPAPIAQYLRDYQVVGAKFLHRKFVFQEGCILGDD 202
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL A FGK DE D + + + Y +L+ICP S+I NW+ E +
Sbjct: 203 MGLGKTVQVAAFLTAAFGKTGDERDDKRMREIRFCPGRWYPRILVICPGSLIINWKNELN 262
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW +++ IYHG N+D I+ + +E++IT++D+Y+ + S ++ V W+ I DE HRL
Sbjct: 263 RWGWWHIDIYHGTNKDDIMGTARSGLLEIMITTYDTYKNNRSSINMVPWDACIADECHRL 322
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ RIGLTGT +QNK EL+ L DW PG G + + + +PL
Sbjct: 323 KDGSSETTKAMNEVNALCRIGLTGTAIQNKYEELWTLLDWTNPGHFGAKSEWMQTISKPL 382
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + +A + + LV +L +Y LRR K I + K D VVFC ++D+
Sbjct: 383 TVGQSHDATVAQLSLARQTAKKLVQNLLPRYFLRRMKT-LIADQLPKKTDRVVFCPLTDV 441
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q AY L PEI L + PC G + CC+ L P +V P ++ L
Sbjct: 442 QAEAYENFLSCPEIHLLRSISDPCPHGR--KKGWCCQT--RLPDGRRWP-AIVFPGMITL 496
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q+++NHL L+ P+ D K +K+ E + Q + L + + CGK
Sbjct: 497 QKLANHLALLTPSTTDIESKHKKELETLKLCLPNTWKPL--YEQRDQIRNLVNPEFCGKW 554
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ ++KL+ W GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD F
Sbjct: 555 KVMKKLLRFWHQNGDKVLVFSHSVRLLRILQHLFTSTSYNVSYLDGSLSYEERQDVVDTF 614
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 615 NSDPTQFVFLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQTRDVEVFR 674
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF----- 693
L+S G++EE+VY RQVYKQQ +NI + E+RYF+GVQ ++ +GE+FG+ N+F
Sbjct: 675 LISQGTVEEIVYARQVYKQQQANIGYTASSERRYFKGVQHDEDRKGEIFGLSNIFTYHGT 734
Query: 694 ----RDLSDNLFTSE------IIESHEEQGQ---------QQERHHCTNQGFKGLETHIV 734
R++ +N +E + + EQ +QE + G L +
Sbjct: 735 SSLVRNIVNNTNIAEAKAGVDMADVDMEQAAKDEEAFGPLKQEDAGAEDGGVSQLAAFLT 794
Query: 735 SSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
+ L S S KS + +L +G+ Y H N +++
Sbjct: 795 AENQQQVLESKISGAPKSD------AIQAILTSVGVEYTHDNSEVI 834
>gi|378730425|gb|EHY56884.1| DNA excision repair protein ERCC-6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1195
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/590 (41%), Positives = 351/590 (59%), Gaps = 13/590 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PASI L ++Q +GV FL++L+ + GGILGDDMGLGKT+Q +AFL A +GK
Sbjct: 230 YSLGLIPASIARFLRDYQVKGVAFLHELFVYQKGGILGDDMGLGKTVQVVAFLTAAYGKT 289
Query: 184 -ESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMIL 238
+ DS ++ + + Y LIICP +++ NW E RW + V IYHG +R +
Sbjct: 290 GDERDSKRMRKMRRANREYPRTLIICPGTLMNNWRDELERWGWWQVDIYHGNASSRHEVF 349
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+A +EV+IT++ +YR + S ++ V W+ V+ DE H++K+ S + A E+ R
Sbjct: 350 LTAQAGMLEVMITTYHTYRANRSEINMVKWDCVVADECHQIKDRNSGITKAMNEVNALCR 409
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ EPLK GQ A + A +
Sbjct: 410 IGLTGTAIQNKYEELWTLLNWTNPGRFGPVSTWKTTICEPLKLGQSHDASNYQLARARKT 469
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L ++ LRRTK I + K D VVFC ++ Q AY+ L+ +Q +
Sbjct: 470 AKMLVNNLLPQFFLRRTKA-LIKDQLPKKTDRVVFCPLTPTQAEAYQNFLESDVVQYIKT 528
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
C CGS CC R++ DG + VLP + L+ ISNHL ++ P D D
Sbjct: 529 SSQLCECGSGKKAGWCC-RMELPDGTRWQNW--VLPAMHVLRHISNHLAVLIPQGADPSD 585
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-KIL 536
KQ KD EL + +S + + + CGK R L++L+ W +GD K+L
Sbjct: 586 KQAKDLELLQIALPDQWQTI--YRTRDSILHTGNPEFCGKWRVLQRLLSFWHDQGDNKVL 643
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
+FS+SVR+L +L I ++ + LDGS R + V DFN+ P++ VFLISTRAGG+
Sbjct: 644 IFSHSVRLLKMLRDLFISTKFNVNYLDGSMHYEDRYAAVRDFNTDPTQFVFLISTRAGGV 703
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLN+ SAN+VV+ DP+WNPA DLQAQDR++R GQ R V VFRL+S G+LEE+VY RQ+YK
Sbjct: 704 GLNITSANKVVVVDPHWNPAYDLQAQDRAYRIGQTRDVEVFRLISQGTLEEIVYARQIYK 763
Query: 657 QQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
QQ +NI + E+RYF+GVQD K+ +GE+FGI NLF +N +I+
Sbjct: 764 QQQANIGYTATSERRYFQGVQDRKDQKGEIFGIQNLFAFQGENQVLRDIV 813
>gi|320588829|gb|EFX01297.1| DNA excision repair protein [Grosmannia clavigera kw1407]
Length = 1166
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/602 (40%), Positives = 345/602 (57%), Gaps = 30/602 (4%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+P I L ++Q EGV+FL++ + + GGILGDDMGLGKT+Q AFL A FGK DE
Sbjct: 227 IPGCIAQYLRDYQIEGVQFLHRQFVYQRGGILGDDMGLGKTVQVAAFLTAAFGKTGDERD 286
Query: 187 DSTILKDNKV--DKKG-------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMI 237
D + K + D+ G VL++CP S+IQNW E RW ++V +YHG ++ +
Sbjct: 287 DKRMRKMRRAAGDEAGSNGRWYPVVLVVCPGSLIQNWRNELQRWGWWHVDVYHGAGKEDV 346
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
L+ A +E+++T++ +Y+ H ++ V W+ V+ DE H LK S A E+
Sbjct: 347 LQAARAGRLEIMVTTYATYKNHRERINTVAWDAVVADECHVLKERDSGTTRAMNEVNALC 406
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
RIGLTGT +QN+ EL+ L DW PG G+ + + PL GQ A + +A
Sbjct: 407 RIGLTGTAIQNRYAELWTLLDWTNPGRFGSLAEWNQTISRPLTIGQSHDATLYQLSLARR 466
Query: 358 RKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ LV +L LRR K I + K D VVFC +++ Q AY RL+ P++ L
Sbjct: 467 TAKKLVQNLLPDVFLRRMKS-LIADQLPRKTDRVVFCPLTERQAAAYERLVDSPDVTFLR 525
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF---CLVLPCLVKLQQISNHLELIKPNPR 473
PC C S + CC R + G P LV P + LQ++++HL L+ P
Sbjct: 526 TVSDPCDCDSGAKRGWCCYR--TIPGPHGRPVNWASLVFPAIQSLQKLASHLMLLVPGTH 583
Query: 474 DEPDKQRKDAELASAVFGPDIDLV-----GGNA----QNESFIGLSDVKSCGKMRALEKL 524
D+ A+ A+ + L+ G A +S + L+D + CGK + L KL
Sbjct: 584 ANTDET---ADRAADRHERQMRLLQTCEPDGWASLYRHRDSMVHLADPELCGKWKVLRKL 640
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ W GDK+L+FS++VR+L +L+ YS S LDGS RQ +VDDFN+ P++
Sbjct: 641 LRFWHDSGDKVLVFSHTVRLLQMLQHLFHSTSYSVSYLDGSLSYEERQRVVDDFNTDPAQ 700
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLISTRAGG+GLN+ SAN+VVI DP+WNPA DLQAQDR++R GQ R V VFRL+SAG+
Sbjct: 701 FVFLISTRAGGVGLNITSANKVVIVDPHWNPAYDLQAQDRAYRIGQVRDVDVFRLVSAGT 760
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+EE+VY RQ+YKQQ +NI S E+RYF GVQ +GE+FG+ NL D + +
Sbjct: 761 IEEIVYARQIYKQQQANIGYSASTERRYFRGVQQDSARKGEIFGLGNLLAFHGDQVVLRD 820
Query: 705 II 706
I+
Sbjct: 821 IV 822
>gi|358387969|gb|EHK25563.1| hypothetical protein TRIVIDRAFT_33213 [Trichoderma virens Gv29-8]
Length = 1014
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 271/708 (38%), Positives = 391/708 (55%), Gaps = 48/708 (6%)
Query: 107 FDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDM 164
FD +P KD E P +PASI L ++Q EGV+FL+K + + GGILGDDM
Sbjct: 139 FDPRSGIKPSRPYKDIELPQSGGLIPASIAQYLRDYQVEGVRFLHKKFVYQEGGILGDDM 198
Query: 165 GLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSR 220
GLGKT+Q +AFL A FGK DE + + + ++ Y +LI+CP S+I NW E SR
Sbjct: 199 GLGKTVQVVAFLTAAFGKTGDERDGKRMRQMRLLSERWYPKILIVCPGSLIMNWRNELSR 258
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W ++V ++HG N+D +L A +E++IT++++Y+ S ++ V W+ +I DE HRLK
Sbjct: 259 WGWWHVDLFHGANKDDVLGAARAGMLEIMITTYETYKNSRSSINMVQWDAIIADECHRLK 318
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
+ S+ A E+ RIGLTGT +QN+ EL+ L DW PG GT+ + +PL
Sbjct: 319 DRYSETTKALQEVNALCRIGLTGTAIQNRYEELWTLLDWTNPGHFGTKAEWSHTITKPLT 378
Query: 341 HGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
GQ A + +A + + LV +L +Y LRR K I + K D VVFC ++DLQ
Sbjct: 379 VGQSHEATVAQLSLARQTAKKLVQNLLPRYFLRRMKS-LIADQLPKKSDRVVFCPLTDLQ 437
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
AY L E+ L C G + CC D +V P ++ LQ
Sbjct: 438 MEAYENFLDSKEVAILRTASEDCEHGGK--RGWCC---DEFLPNGKRWQTVVFPSMIILQ 492
Query: 460 QISNHLELIKPNPRDEPDKQRKD-AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+++NHL L+ P D +K ++ A L + + PD V + + L + + CGK
Sbjct: 493 KLANHLTLLVPQTTDLEEKHEQELATLQTCM--PDTWRVL-YEKRDRISNLVNPEFCGKW 549
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+KL+ W G+K+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD F
Sbjct: 550 KILKKLLKFWHGSGNKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEARQDVVDTF 609
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNPA DLQAQDR++R GQ R V VFR
Sbjct: 610 NSDPTQFVFLISTKAGGVGLNITSANKVVIIDPHWNPAYDLQAQDRAYRIGQTRDVEVFR 669
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF----- 693
L+S G++EE+VY RQ+YKQQ +NI + E+RYF GVQ E +GE+FG+ N+F
Sbjct: 670 LISVGTIEEIVYARQIYKQQQANIGYTASSERRYFRGVQQDTERKGEIFGLSNIFTYHSN 729
Query: 694 ----RDLSDNLFTSEI----------IESHEEQGQ------QQERHHCTNQGFKGLETHI 733
RD+ + +E +E + G+ Q+E + G L +
Sbjct: 730 MGLLRDIVNKTNIAEAKAGVHLADVDMEEAAKDGEDLGVVKQEEGTDSEDGGLSQLADLL 789
Query: 734 VSSKDSNTLLSTGSKT-RKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
S TL + +KT R SD A +L G+ Y H N +++
Sbjct: 790 TSGDQQKTLEAKKAKTSRLKSDAVQA-----ILTAAGVEYTHDNSEVI 832
>gi|297684878|ref|XP_002820041.1| PREDICTED: uncharacterized protein LOC100434553 [Pongo abelii]
Length = 1549
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 361/605 (59%), Gaps = 27/605 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P +IN L +QREG +FLY+ Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSDDGD----SIPYTINRYLRNYQREGTRFLYEHYIHGGGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 164 AVLHKKGTREDIENNMPEFLLRSMKKEPLCSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLQWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+R +F++ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTYFKKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+I+NH+
Sbjct: 403 VLETEDVTLILQSSEPCTCRSGRKRRNCCYKT-NSHG--ETVKTLYLSYLTVLQKIANHV 459
Query: 466 ELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L++ KQ++ + VF D V +++ +F LSD K GKM+ L++
Sbjct: 460 ALLQAA---STSKQQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQ 515
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 516 LLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQD 575
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 576 VNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 635
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQ+YKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T
Sbjct: 636 TVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLT 695
Query: 703 SEIIE 707
+I+E
Sbjct: 696 KDILE 700
>gi|440906008|gb|ELR56322.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Bos grunniens mutus]
Length = 685
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/638 (39%), Positives = 374/638 (58%), Gaps = 33/638 (5%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ +F + P LS++G+ +P +IN L ++Q
Sbjct: 68 IFDDEDLEKPYFPDR---------KFPSSAV--PFQLSENGD----SIPYTINRYLRDYQ 112
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKDN 194
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV GK + + +L++
Sbjct: 113 REGAQFLYGHFIQGRGCILGDDMGLGKTVQVISFLAAVLGKKGTREDIENNMPEFLLRNM 172
Query: 195 KVD----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLI 250
K D K LI+ P SV+ NW+ E W F V+I HG +D L +++ E+ +
Sbjct: 173 KKDPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTILHGNKKDSELIRVKQRKCEIAL 232
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
T++++ R+ L+ + W +IVDEAHR+KN K+++ LK RIGLTGTI+QN +
Sbjct: 233 TTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNM 292
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + Q L + +
Sbjct: 293 KELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWF 352
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S +
Sbjct: 353 LRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCTCNSGQKR 411
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
CC + N G L L LQ+++NH+ L++ ++ + VF
Sbjct: 412 RNCCYK-TNSQG--ETVKTLYFSYLAVLQKVANHVALLQTTSTSR-QQETLIKRICDQVF 467
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L++
Sbjct: 468 SRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQ 526
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+FD
Sbjct: 527 YCMASGLDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFD 586
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK 670
P WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V + K
Sbjct: 587 PTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 646
Query: 671 RYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RYFE VQ KE QGELFG+ NLF+ S + T +I+E
Sbjct: 647 RYFEAVQGSKEHQGELFGVYNLFKLRSQGSCLTRDILE 684
>gi|154279660|ref|XP_001540643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412586|gb|EDN07973.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 990
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/589 (40%), Positives = 349/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PASI L ++Q +GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 205 YSLGLIPASIAQWLRDYQVQGVEFLHELFVYQKGGILGDDMGLGKTVQIIAFLTAAYGKT 264
Query: 183 --DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
+ + + D+ Y LIICP +++QNW E RW +++ +YHG ++ L
Sbjct: 265 GDERDAKRMRKMRRRGDRVWYPRTLIICPGTLLQNWRSELDRWGWWHIEVYHGAGKEEAL 324
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + +E+++T++ +Y ++ L+ V W+ ++ DE H K KS+ + E+ R
Sbjct: 325 QSAASGRLEIMLTTYKTYVLNKDALNMVEWDCIVADECHIFKERKSETAQSMNEINALCR 384
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ EPLK GQ A + A +
Sbjct: 385 IGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICEPLKLGQSHDATVYQLSKARKT 444
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 445 ARKLVENLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIEYIKT 503
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
C CGS CC R+ G + V P + LQ++SNHL ++ P +D +
Sbjct: 504 SSDKCHCGSGKKSGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDPTE 560
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK R L+KL+ W GDK+L+
Sbjct: 561 KQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLV 618
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDG+ R +VD+FN+ + VFLISTRAGG+G
Sbjct: 619 FSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADVREFVFLISTRAGGVG 678
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 679 LNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQ 738
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ GE+FG+ N+F+ D++ +I+
Sbjct: 739 QQANIGYTASTERRYFKGVQEKKDRNGEIFGLSNMFQYQGDSIVLRDIV 787
>gi|342319537|gb|EGU11485.1| RAD26-like SNF2 family DNA-dependent ATPase [Rhodotorula glutinis
ATCC 204091]
Length = 1445
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/618 (40%), Positives = 357/618 (57%), Gaps = 35/618 (5%)
Query: 109 HTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGK 168
+TGP + + D QVPA IN L +QREG +FLY +K GGILGDDMGLGK
Sbjct: 607 NTGPHKLSNIPGD----TAQVPAPINRFLRPYQREGAEFLYGQFKKGIGGILGDDMGLGK 662
Query: 169 TIQTIAFLAAVFGKD--ESSDSTILKD-----------NKVDKKGYVLIICPSSVIQNWE 215
TIQ IAFL+AV K + D+ KD D LI CP+SV+ NW+
Sbjct: 663 TIQVIAFLSAVMNKTGFKKDDAGKRKDAINDLAADEPFKPTDLGLTCLIACPASVVGNWQ 722
Query: 216 IEFSRWSTFNVSIYHGPNRD--MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
EF W F+V IY GP+ D +L + + ++V+I S + R + + ++ IVIV
Sbjct: 723 REFRTWGYFDVGIYGGPSSDKKAVLNRFDRGYLDVVIASIEGVRNNIDDFAARDFSIVIV 782
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHR+KN KS +A T R GLTGT +QN++ E + + +W P +GT + +
Sbjct: 783 DEAHRVKNPKSNTTIALHRFPTPLRYGLTGTAIQNRLDEFWCILNWAVPKRVGTHSQWNQ 842
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVF 392
P+K+ Q+ TA + I + R L +L + LRRTKE ++ + K DN+V
Sbjct: 843 LVSRPIKYAQQATATDDEIAVGRSRAVALAGKLLPHFWLRRTKE-SVKIQLPKKTDNIVL 901
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ LQK Y+ LL L +++ ++ D PC CGS + E KR CD L+
Sbjct: 902 CPLTALQKDVYKSLLNLEQVKIILTADDPCPCGSVDEKNERYKRGS---CCDQKWTKLIF 958
Query: 453 PCLVKLQQISNHLELIKPNPRDE---PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
+ ++SNHL LI P+ D+ P K +D E A A F D + + +
Sbjct: 959 KYITLFAKVSNHLGLIYPDKEDKTTNPTKYEQDLEWARAAFPNDYE-----KRTPGPMAF 1013
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSN 569
D CGK L +L+ W S+GDK+L+F+ S++++D+LE + Y + LDGSTP
Sbjct: 1014 LDPNLCGKWTILCQLLEIWHSQGDKVLIFTMSLKIIDLLENLMQHTRYEYLVLDGSTPQE 1073
Query: 570 LRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
R LVD+FN S++ FLISTRAGG+GLNL +ANRVVIFDPNWNPA DLQA DR++RF
Sbjct: 1074 DRMPLVDEFNDPHSEKFCFLISTRAGGVGLNLTAANRVVIFDPNWNPAHDLQAMDRAYRF 1133
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQ-DCKEFQGELF 687
GQ R V V+RL+ AG+LEEL+Y RQ YK+ ++N + E+R F GV+ + KE GEL+
Sbjct: 1134 GQTREVTVYRLIGAGTLEELIYNRQQYKRSIANTSYDASAERRLFTGVEGEGKEQAGELW 1193
Query: 688 GICNLFRDLSDNLFTSEI 705
G+ N+F+ ++N+ +E+
Sbjct: 1194 GVKNIFK-FNENMSLTEM 1210
>gi|298710909|emb|CBJ49262.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1332
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/610 (40%), Positives = 364/610 (59%), Gaps = 40/610 (6%)
Query: 132 SINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS-DSTI 190
SIN L ++QREGV++LY ++ GGILGDDMGLGKT+Q+IA LA+V K + DS
Sbjct: 458 SINRYLRDYQREGVRWLYAKFQAGQGGILGDDMGLGKTVQSIALLASVLRKSGTGRDSEE 517
Query: 191 LKDNKVDKKGYV--------LIICPSSVIQNWEIEFSRWSTFNV-SIYHGPNRDMILEKL 241
L+ + K+G LI+ P++V+ W + W F + G + D ++ L
Sbjct: 518 LRRRR--KEGLPASSTGLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESGRDADDLMVAL 575
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+A EV+ TS+D R L + ++ VI DE H +K+ + + A EL+T+ GL
Sbjct: 576 KAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVFGL 635
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT++QN + EL+ L + P ++G + F E + EP+K + + A R+ ++R +
Sbjct: 636 TGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKE 695
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + K ++RRTK+E +G ++ GK D VVFC +S++Q+ Y+R+L LPE Q L P
Sbjct: 696 LDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEP 755
Query: 422 CSCG--SPLTQVECCKRLDNLDG----------------------CDSCPFCLVLPCLVK 457
C+CG T+ CC + + G CD CPFC LP + K
Sbjct: 756 CNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECDKCPFCCQLPAVSK 815
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI-DLVGGNAQNESFIGLSDVKSCG 516
LQ+I+NH L++ N RD K+++ + A F +++GG +++ F+ +S V CG
Sbjct: 816 LQKIANHPCLLQENIRDPEHKRQQQRQFAEVAFTDRAREIMGGLERSQKFLDVSKVGVCG 875
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
KM++LE L+ + DK+L+FS+S MLD+LE F+ KGY + RLDG+T S RQ+ ++
Sbjct: 876 KMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARIN 935
Query: 577 DFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
+FNS + VFLISTRAGG GLNL +A+RVV++D NWNPA LQAQDR++R GQKR V
Sbjct: 936 EFNSDRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVA 995
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVS--GKLEKRYFEGVQDCKEFQGELFGICNLF 693
VFRL+S G++EE+ Y RQ+YK Q+++ A+ + +R F VQ KE QGELFGI NL
Sbjct: 996 VFRLISKGTIEEMCYMRQIYKLQITSAAMGDQARGGRRQFNAVQGSKEQQGELFGIQNLL 1055
Query: 694 RDLSDNLFTS 703
+ D+L +
Sbjct: 1056 KFSDDSLLKT 1065
>gi|345785206|ref|XP_533502.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Canis lupus familiaris]
Length = 800
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/639 (39%), Positives = 374/639 (58%), Gaps = 34/639 (5%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK GR +F + PL S DG+ +P +IN L ++Q
Sbjct: 182 IFDDEDLEKPCFP---GR------KFPSSAVAFPL--SADGD----SIPYTINRYLRDYQ 226
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKDN 194
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 227 REGAQFLYAHFIQGKGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRSM 286
Query: 195 KVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVL 249
K + K LI+ P SV+ NW E W F V+I HG +D L +++ E+
Sbjct: 287 KKEPPSSTAKKMFLIVAPLSVLYNWRDELDTWGYFRVTILHGNKKDNELVRVKQRKCEIA 346
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+T++++ R+ L+ + W VIVDEAH++KN K+++ LK RIGLTGTI+QN
Sbjct: 347 LTTYETLRLCLDELNSLEWSAVIVDEAHKIKNPKARVTEVMKALKCNVRIGLTGTILQNN 406
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + Q L ++ +
Sbjct: 407 MKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKMMSGW 466
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PCSC S
Sbjct: 467 FLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCSSGRK 525
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
+ CC + ++ L L LQ+++NH+ L++ + ++ + V
Sbjct: 526 RRNCCYKTNSHGETVKT---LYFSYLAVLQKVANHVALLQ-SASTSKQQETLIKRICDQV 581
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
F D V +++ SF LSD K GKM+ L++L+ DKILLFS+S ++LD+L+
Sbjct: 582 FSKFPDFVQ-KSKDASFETLSDPKYSGKMKVLQQLLNHCRKNKDKILLFSFSTKLLDVLQ 640
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIF 609
++ + G+ + RLDGST S R +V +FNS+ + L+ST AGG+GLN V AN VV+F
Sbjct: 641 QYCMAAGFDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGVGLNFVGANVVVLF 700
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE 669
DP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V +
Sbjct: 701 DPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENA 760
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 761 KRYFEAVQGSKEHRGELFGVYNLFKLRSQGSCLTRDILE 799
>gi|303323511|ref|XP_003071747.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111449|gb|EER29602.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1011
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/687 (37%), Positives = 388/687 (56%), Gaps = 41/687 (5%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + VPA I L ++Q EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 206 YSLGLVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 265
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ +KG LIICP ++IQNW E SRW ++V +YHG ++
Sbjct: 266 GDERDAKRMR--KIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWSVEVYHGDTKEE 323
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+LIT++ +YR++ L+ V W+ V+ DE H +K+ +S+ + EL
Sbjct: 324 ALQSAISGRVEILITTYTTYRMNKDSLNMVEWDCVVADECHLMKDRRSETAKSMHELNAL 383
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 384 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKIGQSHDATVYQLSKAR 443
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC +++ Q AY LL I+C+
Sbjct: 444 KTAKKLVKNLLPAFFLRRMKT-LIADQLPRKSDRVVFCPLTETQADAYENLLDSAMIECI 502
Query: 416 INKDLPCSCGSPLTQVECC-KRLDNLDGCDSCPF-CLVLPCLVKLQQISNHLELIKPNPR 473
PC CGS CC KR+ P+ V P + LQ++ NHL + P
Sbjct: 503 KMSSDPCPCGSKKKAGWCCYKRIPG-----GGPWQNYVFPAISNLQKLCNHLATLIPQST 557
Query: 474 DEPDKQRKD-AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D +KQ KD A L AV +L S + S+ + CGK + L+KL+ W + G
Sbjct: 558 DPEEKQEKDLAMLEVAVPDQWRELYRTRG---SILNYSNPEFCGKWKVLKKLLKWWHANG 614
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
DK+L+FS+SVR+L +L+ Y+ S LDG+ R +VDDFN+ P + VFLIST+
Sbjct: 615 DKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTK 674
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ+R V VFRL+SAG++EE+VY R
Sbjct: 675 AGGVGLNITSANKVVVVDPNWNPSHDLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYAR 734
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----S 708
Q+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF +N+ +I+ +
Sbjct: 735 QIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLRNLFEYKDNNIVLRDIVNKTNVA 794
Query: 709 HEEQG------QQQERHHCTNQGFKGLETHIVSS---------KDSNTLLSTGSKTRKSS 753
+ G + ER N+ + + + + +D + + + +S
Sbjct: 795 ESKAGVDVVDFEIDERGDDENKTLESTDAYTEDATMSQLAALVQDGSDAIKKWGEKDRSV 854
Query: 754 DPEMARTSKPLLEDMGIVYAHRNDDIV 780
P + +L G+ Y H N +++
Sbjct: 855 TPARHDPIQAILASAGVEYTHENSEVI 881
>gi|426219863|ref|XP_004004137.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Ovis aries]
Length = 712
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 374/638 (58%), Gaps = 33/638 (5%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ +F + P LS++G+ +P +IN L ++Q
Sbjct: 95 IFDDEDLEKPYFPDR---------KFPSSAV--PFQLSENGD----SIPYTINRYLRDYQ 139
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKDN 194
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV GK + + +L++
Sbjct: 140 REGAQFLYGHFIQGRGCILGDDMGLGKTVQVISFLAAVLGKKGTREDIENNMPEFLLRNM 199
Query: 195 KVD----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLI 250
K D K LI+ P SV+ NW+ E W F V+I HG +D L +++ E+ +
Sbjct: 200 KKDPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTILHGNKKDSELIRVKQRKCEIAL 259
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
T++++ R+ L+ + W +IVDEAHR+KN K+++ LK RIGLTGTI+QN +
Sbjct: 260 TTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKARVTEIMKALKCNVRIGLTGTILQNNM 319
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + Q L + +
Sbjct: 320 KELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARKMSGWF 379
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S +
Sbjct: 380 LRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCTCSSGQRR 438
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
CC + ++ L L LQ+++NH+ L++ ++ + VF
Sbjct: 439 RNCCYKTNSQGETVKT---LYFSYLAVLQKVANHVALLQ-TASTSKQQETLIKRICDQVF 494
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L++
Sbjct: 495 SRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQ 553
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+FD
Sbjct: 554 YCMASGLDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFD 613
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK 670
P WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V + K
Sbjct: 614 PTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 673
Query: 671 RYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 674 RYFEAVQGSKEHRGELFGVYNLFKLRSQGSCLTRDILE 711
>gi|393219484|gb|EJD04971.1| hypothetical protein FOMMEDRAFT_154122 [Fomitiporia mediterranea
MF3/22]
Length = 1043
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 279/705 (39%), Positives = 372/705 (52%), Gaps = 55/705 (7%)
Query: 105 FQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDM 164
F D + P VL + + I++PA IN L E+QREGV+FLY YK GG+LGDDM
Sbjct: 204 FSRDSSQVLAPYVLDAEKD---IKIPAHINVFLREYQREGVQFLYDRYKEGRGGVLGDDM 260
Query: 165 GLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDK-------------------KGYVLII 205
GLGKTIQ I+FL A+ K + V + LII
Sbjct: 261 GLGKTIQVISFLTAIMDKYNDRRDVHRRRKHVSRLQDGQEWREHRRLPPANATWPTCLII 320
Query: 206 CPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHGSIL 263
PSSV NW+ EF W F + +Y+GP R L ++VLI SFD+ R +L
Sbjct: 321 APSSVTHNWQREFGTWGYFEIGMYNGPPEQRREALRDFTLGRLDVLIASFDTARGDIDLL 380
Query: 264 SEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPG 323
S + W ++ VDEAH+LKN SK+ +A + R GLTGT +QN E++ L DW G
Sbjct: 381 SYLPWSVIFVDEAHKLKNPASKITLAFNQFTCEARFGLTGTAIQNAYDEMWTLLDWSNRG 440
Query: 324 SLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHL 382
LG+ + +R PL GQ +A E +A LV +L + LRRTK+ I +
Sbjct: 441 RLGSLKDWRAAVSRPLAVGQSASASEAERTVAKAVAHILVTKLLPNFFLRRTKD-LIRNQ 499
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD------LPCSCGSPLTQVECCKR 436
+ K D VVFC ++ Q Y+R+L E + N +PC CGS L + +CC
Sbjct: 500 LPQKIDEVVFCPLTPQQITVYKRILAHREKRMKANSTSPLPDTVPCDCGSGLPRGKCCHV 559
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
++ S F L L+K ISNHL LI P+P D ++ +++ E++ F D
Sbjct: 560 ME------SVHFFTYLTILLK---ISNHLALILPSPNDTEEQTKRNREISRIAFQSDTIP 610
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRK 555
G A I L CGK L L+ W + +K+L+F+ SV++LD+L+ L
Sbjct: 611 KYGPA-----ILLPQF--CGKWDVLNLLLKEWQKDRTNKVLIFTKSVKLLDMLDYHLNSN 663
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
YSF RLDGST N R L+D FN+ P +FLIST AGG GLNL SAN+VVIFDPNWNP
Sbjct: 664 SYSFCRLDGSTKQNERMPLIDKFNNDPEIFIFLISTLAGGTGLNLTSANKVVIFDPNWNP 723
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
A DLQA DR++RFGQ R V V+RLL AGS+EEL+Y RQVYKQQ+ I + RYFEG
Sbjct: 724 AHDLQAMDRAYRFGQTRDVYVYRLLGAGSIEELIYARQVYKQQMMKIGYEASHQTRYFEG 783
Query: 676 VQDCKEFQGELFGICNLFRDLSDNLFTSEIIE-SHEEQGQQQERHHCTNQGFKGLETHIV 734
VQ + +GELFG NLFR + L T IE +H + H N+ K
Sbjct: 784 VQGDTKRRGELFGADNLFRLHENTLATKMAIERAHLAEFDWALAHMEGNKKGKAR----A 839
Query: 735 SSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDI 779
S DS L ++ + D ++ R LL D G+ R + I
Sbjct: 840 SLGDSKEALEAEARNQGHEDADL-RGLATLLFDDGVPAEERGERI 883
>gi|417406219|gb|JAA49776.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1240
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/641 (39%), Positives = 371/641 (57%), Gaps = 38/641 (5%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ FQ LS++G+ +P +IN L ++Q
Sbjct: 83 IFDDEDLEKPYFPDRKFPSSAVAFQ-----------LSENGD----SIPYTINRYLRDYQ 127
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKDN 194
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 128 REGAQFLYGHFIQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRSL 187
Query: 195 KVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVL 249
K + K LI+ P SV+ NW E W F V+I HG +D L +++ E+
Sbjct: 188 KKEPPSSIAKKMFLIVAPLSVLYNWRDELDTWGYFRVTILHGNKKDTELIRVKQRKCEIA 247
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 248 LTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNN 307
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + Q L + +
Sbjct: 308 MKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQMLARRMTGW 367
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LRRTK I + + KED +V+C+++D QK Y+ +L+ ++ ++ PC+CGS
Sbjct: 368 FLRRTKT-LIKNQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCGSGRK 426
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--AELAS 487
+ CC + N G L L LQ+++NH+ L++ KQ++ +
Sbjct: 427 RRNCCYKT-NSHG--ETVKTLYFSYLTVLQKVANHVSLLQAA---STSKQQETLIKRICD 480
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+
Sbjct: 481 QVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLSHCRKNRDKVLLFSFSTKLLDV 539
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
L+++ + G + RLDGST S R +V +FN + V L+ST AGGLGLN AN VV
Sbjct: 540 LQQYCMASGLDYRRLDGSTKSEDRIKIVKEFNGTQDVNVCLVSTMAGGLGLNFTGANVVV 599
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V +
Sbjct: 600 LFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSE 659
Query: 668 LEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIE 707
KRYFE VQ KE +GELFG+ NLF+ + T +I+E
Sbjct: 660 NAKRYFEAVQGSKEHRGELFGVSNLFKLRFQGSCLTKDILE 700
>gi|402898076|ref|XP_003912058.1| PREDICTED: uncharacterized protein LOC101017805 [Papio anubis]
Length = 1649
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/605 (40%), Positives = 360/605 (59%), Gaps = 27/605 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P ++N L ++QREG +FLY Y + G ILGDDMGLGKT+Q ++FLA
Sbjct: 210 LSDDGD----SIPYTVNRYLRDYQREGAQFLYGHYIHGRGCILGDDMGLGKTVQVMSFLA 265
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 266 AVLHKKGTREDIENNMPEFLLRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 325
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V+I HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 326 VTILHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 385
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LGTR F++ + +P++HGQR
Sbjct: 386 ITEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRH 445
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 446 TATKRELATGRKAMQRLARRMSGWFLRRTKA-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 504
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+++NH+
Sbjct: 505 VLETEDVTLILQSSEPCTCRSGRKRRNCCYKT-NSHG--ETVKTLYLSYLTVLQKVANHV 561
Query: 466 ELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L++ KQ++ + VF D V +++ +F LSD K GKM+ L++
Sbjct: 562 ALLQAA---STSKQQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQ 617
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 618 LLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQD 677
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 678 VNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 737
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQVYKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T
Sbjct: 738 TVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKLRSQGSCLT 797
Query: 703 SEIIE 707
+I+E
Sbjct: 798 KDILE 802
>gi|225562673|gb|EEH10952.1| CHR9/SNF2/SWI2 [Ajellomyces capsulatus G186AR]
Length = 1032
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/589 (40%), Positives = 347/589 (58%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q +GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 223 YSLGLIPAPIAQWLRDYQVQGVEFLHELFVYQKGGILGDDMGLGKTVQIIAFLTAAYGKT 282
Query: 183 --DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
+ + + D+ Y LIICP +++QNW E RW +++ +YHG ++ L
Sbjct: 283 GDERDAKRMRKMRRRGDRVWYPRTLIICPGTLLQNWRSELDRWGWWHIEVYHGAGKEEAL 342
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ A +E+++T++ +Y ++ L+ V W+ ++ DE H K KS+ + E+ R
Sbjct: 343 QSAAAGRLEIMLTTYKTYVLNKDALNMVEWDCIVADECHIFKERKSETAQSMNEINALCR 402
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ EPLK GQ A + A +
Sbjct: 403 IGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICEPLKLGQSHDATVYQLSKARKT 462
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 463 ARKLVENLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIEYIKT 521
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
C CGS CC R+ G + V P + LQ++SNHL ++ P +D +
Sbjct: 522 SSDKCHCGSGKKSGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDPTE 578
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK R L+KL+ W GDK+L+
Sbjct: 579 KQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLV 636
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDG+ R +VD FN+ + VFLISTRAGG+G
Sbjct: 637 FSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDHFNADIREFVFLISTRAGGVG 696
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 697 LNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQ 756
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ GE+FG+ N+F+ D++ +I+
Sbjct: 757 QQANIGYTASTERRYFKGVQEKKDRNGEIFGLSNMFQYQGDSIVLRDIV 805
>gi|403294498|ref|XP_003938220.1| PREDICTED: uncharacterized protein LOC101030049 [Saimiri
boliviensis boliviensis]
Length = 1550
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 358/605 (59%), Gaps = 27/605 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P +IN L ++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 109 LSDDGD----SIPYTINRYLRDYQREGAQFLYGHYIHGRGCILGDDMGLGKTVQVISFLA 164
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 165 AVLHKKGTREDIENNMPEFLLRSMKKEPSSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 224
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W +IVDEAHR+KN K++
Sbjct: 225 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIKNPKAR 284
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+ +F++ + +P++HGQR
Sbjct: 285 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSNSYFKKQFSDPVEHGQRH 344
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 345 TATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 403
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+++NH+
Sbjct: 404 VLETEDVTLILQSSEPCTCSSGRKRRNCCYKT-NSHG--ETVKTLYLSYLTVLQKVANHV 460
Query: 466 ELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L++ KQ++ + VF D V ++ +F LSD K GKM+ L++
Sbjct: 461 ALLQAA---STSKQQETLIKRICDQVFSRFPDFVQ-KTKDAAFETLSDPKYSGKMKVLQQ 516
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 517 LLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQD 576
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
V L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 577 VNVCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 636
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQVYKQQL + V + KRYFE VQ KE QGELFG NLFR S + T
Sbjct: 637 TVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGTHNLFRLRSQGSCLT 696
Query: 703 SEIIE 707
+I+E
Sbjct: 697 RDILE 701
>gi|451856158|gb|EMD69449.1| hypothetical protein COCSADRAFT_195260 [Cochliobolus sativus ND90Pr]
Length = 1044
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 287/811 (35%), Positives = 424/811 (52%), Gaps = 88/811 (10%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD--ESS 186
+PA I L ++Q EGV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK E
Sbjct: 229 IPAPIAQWLRDYQVEGVQFLHEKFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKTGTERD 288
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG---PNRDMILEK 240
+ K + K + +LI+CP +++QNWE E S+W + V YHG +R +L
Sbjct: 289 AKCMRKIRRFGKNRWYPRILIVCPGTLMQNWEDELSKWGWWEVYRYHGSSAADRKGVLSA 348
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E++IT++ +YR + S ++ V+W+ VI DE H++K++ +++ A ++ RIG
Sbjct: 349 AAKGMLEIMITTYTTYRNNESEINTVDWDCVIADECHQIKSKDAEITKAMNKINALCRIG 408
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QNK E++NL +W PG+ G+ + +++ PLK GQ A + A R Q
Sbjct: 409 LTGTAIQNKYEEIWNLLNWARPGAYGSSQEWKQKISLPLKMGQAHDATNAQLADARSRAQ 468
Query: 361 HLV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
LV +L LRR K I + K D VVFC ++ Q AYR L+ + +
Sbjct: 469 DLVQKILPSVFLRRMKT-LIADQLPKKSDRVVFCQLTQTQADAYRTFLESDRCEFISTAR 527
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CGS + CC N+ D + PC+V Q+++NHL LI P D +KQ
Sbjct: 528 EECGCGSGKGRGYCCHV--NVPDEDEKWAAFIFPCMVTFQKLANHLALIVPLSTDSAEKQ 585
Query: 480 RKDA---ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
KD ELA D+ + N + S + CGK + L +L+ W S GDK+L
Sbjct: 586 AKDLKTLELACPDTYKDLFRIRDN-----ILVQSQREFCGKWKVLRRLLDFWHSNGDKVL 640
Query: 537 LFSYSVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
+FS+SVR+L +L G Y+FS LDGS R V DFN+ P++ VFLIST+AG
Sbjct: 641 IFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEERSQAVADFNADPNQFVFLISTKAG 700
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLN+ SAN+VV+ DP+WNPA DLQAQDR++R GQ R+V VFRL+S+G++EE+VY RQ+
Sbjct: 701 GVGLNITSANKVVVMDPHWNPAYDLQAQDRAYRIGQTRNVEVFRLVSSGTIEEVVYARQI 760
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHE 710
YKQQ +NI + E+RYF+GV D +GELFG+ NLF D++ +I+ +
Sbjct: 761 YKQQQANIGYNASEERRYFKGVMDESSKKGELFGLENLFSFQEDSVLLRDIMHKTNVAES 820
Query: 711 EQGQQQERHHCTNQGFKGLETHIVSSKD---------------SNTLLST-------GSK 748
+ G H F + I+S+K+ +++ LST GSK
Sbjct: 821 KAGVNAYDFHVDESQFDSEDEDILSNKNLGIDDNANIAGIKKLADSFLSTSSAGSKPGSK 880
Query: 749 TRK-SSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQR------------------- 788
T+ +DP A +L G+ Y H N +++ + R
Sbjct: 881 TKHGGTDPINA-----ILAKAGVEYTHENSEVIGRSEIEARLGKQAMELRNDIDLASERV 935
Query: 789 -KKEESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEYSL------------ 835
+ +S Q L ++P H D DG+ A++ I Y
Sbjct: 936 FQASQSQSQRLFNQPGIEHGIHSRDEDVEDGQIVTAATPGEFKINYRYRPNERVRKRQFC 995
Query: 836 -LARFMGM-DVFEFSKWILSATPSAREKLLQ 864
+A MG D EF+ + S+T R K+L+
Sbjct: 996 SMAESMGFDDPVEFALLVESSTQEERRKMLE 1026
>gi|342882102|gb|EGU82856.1| hypothetical protein FOXB_06659 [Fusarium oxysporum Fo5176]
Length = 1028
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 264/700 (37%), Positives = 388/700 (55%), Gaps = 33/700 (4%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+F + +P KD E P +PASI L ++Q GV FL++ + + GGILGDD
Sbjct: 140 KFSESSGIKPSRPYKDIELPQSAGLIPASIAQYLRDYQVAGVSFLHRKFVYQEGGILGDD 199
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFLA FGK DE + + + + Y +LIICP S+I NW+ E
Sbjct: 200 MGLGKTVQVAAFLAVAFGKTGDERDAKRLRQIRQYPHRWYPRILIICPGSLIVNWKNELD 259
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++ ++HG ++D L A VE++IT++D+Y+ S ++ V W+ VI DE HRL
Sbjct: 260 RWGWWHTDLFHGSHKDDALSTARAGLVEIMITTYDTYKNSRSSINMVQWDAVIADECHRL 319
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ R+GLTGT +QN+ EL+ L DW PG GT + + +PL
Sbjct: 320 KDRYSETTKALNEINALCRLGLTGTAIQNRYEELWTLLDWTNPGHFGTLAEWTQRVTKPL 379
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + + +A LV +L +Y LRR K I + K D VVFC ++DL
Sbjct: 380 TVGQSHDATKAQLSLARTTADKLVHNLLPQYFLRRMKS-IIAKQLPKKTDRVVFCPLTDL 438
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q+ AY L+ +I L + PC CG + CC RL L +V P ++ L
Sbjct: 439 QREAYENFLESADIDLLRSLSEPC-CGDK-KRGWCCDRL--LSSGVRWQ-NIVFPSMIVL 493
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q+++NHL L+ P D K D D V N + L + + CGK
Sbjct: 494 QKMANHLTLLVPQTTDLEGKHESDLNTLRTCLPEDWKYVYDN--RDRIKNLVNPEFCGKW 551
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+KL+ W S GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD F
Sbjct: 552 KVLKKLLKFWHSNGDKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEQRQEVVDTF 611
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 612 NSDPTQFVFLISTKAGGVGLNITSANKVVIVDPHWNPSYDLQAQDRAYRIGQTRDVEVFR 671
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L+S G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ + +GE+FG+ N+F +D
Sbjct: 672 LISLGTVEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDTDRKGEIFGLANIFTYHND 731
Query: 699 NLFTSEIIE----SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSN----------TLLS 744
+ EI+ + + G + G + +V +++++ TLL+
Sbjct: 732 SGLLQEIVNKTNIAEAKAGVHLVDVNMEQAAKDGEDLAVVKNEETDAEDGGMSQLATLLT 791
Query: 745 TGSKTR----KSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
++ R K + + + +L G+ Y H N +++
Sbjct: 792 AENQQRMIESKKAKKPKSDAIQAILTSAGVEYTHDNSEVI 831
>gi|119188869|ref|XP_001245041.1| hypothetical protein CIMG_04482 [Coccidioides immitis RS]
gi|392867947|gb|EAS33668.2| DNA excision repair protein [Coccidioides immitis RS]
Length = 1011
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/687 (37%), Positives = 388/687 (56%), Gaps = 41/687 (5%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + VPA I L ++Q EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 206 YSLGFVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 265
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ +KG LIICP ++IQNW E SRW ++V +YHG ++
Sbjct: 266 GDERDAKRMR--KIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWSVEVYHGDTKEE 323
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+LIT++ +YR++ L+ V W+ V+ DE H +K+ +S+ + EL
Sbjct: 324 ALQSAISGRVEILITTYTTYRMNKDSLNMVEWDCVVADECHLMKDRRSETAKSMHELNAL 383
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 384 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKIGQSHDATVYQLSKAR 443
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC +++ Q AY LL I+C+
Sbjct: 444 KTAKKLVKNLLPAFFLRRMKT-LIADQLPRKSDRVVFCPLTETQADAYENLLDSAMIECV 502
Query: 416 INKDLPCSCGSPLTQVECC-KRLDNLDGCDSCPF-CLVLPCLVKLQQISNHLELIKPNPR 473
PC CGS CC KR+ P+ V P + LQ++ NHL + P
Sbjct: 503 KMSSDPCPCGSKKKAGWCCYKRIPG-----GGPWQNYVFPAISNLQKLCNHLATLIPQST 557
Query: 474 DEPDKQRKD-AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D +KQ KD A L AV +L S + S+ + CGK + L+KL+ W + G
Sbjct: 558 DPEEKQEKDLAMLEVAVPDQWRELYRTRG---SILNYSNPEFCGKWKVLKKLLKWWHANG 614
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
DK+L+FS+SVR+L +L+ Y+ S LDG+ R +VDDFN+ P + VFLIST+
Sbjct: 615 DKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTK 674
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ+R V VFRL+SAG++EE+VY R
Sbjct: 675 AGGVGLNITSANKVVVVDPNWNPSHDLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYAR 734
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----S 708
Q+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF +N+ +I+ +
Sbjct: 735 QIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLRNLFEYKDNNIVLRDIVNKTNVA 794
Query: 709 HEEQG------QQQERHHCTNQGFKGLETHIVSS---------KDSNTLLSTGSKTRKSS 753
+ G + ER N+ + + + + +D + + + +S
Sbjct: 795 ESKAGVDVVDFEIDERGDDENKTLESTDAYTEDAAMSQLAALVQDGSDAIKKWGEKDRSV 854
Query: 754 DPEMARTSKPLLEDMGIVYAHRNDDIV 780
P + +L G+ Y H N +++
Sbjct: 855 TPARHDPIQAILVSAGVEYTHENSEVI 881
>gi|317150332|ref|XP_001823954.2| DNA excision repair protein (Rad26L) [Aspergillus oryzae RIB40]
Length = 970
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 351/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 264 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 323
Query: 183 -DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + K + LI+CP ++I+NW E +RW ++V YHG N+++ L
Sbjct: 324 GDERDAKRMRKMRRSGKDQWYPRTLIVCPGTLIKNWMSELTRWGWWHVDTYHGDNKELAL 383
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ VE+LIT++ +Y + ++ V+W+ VI DE H +K S+ A + R
Sbjct: 384 HAARSGRVEILITTYGTYLQNKDSVNMVDWDCVIADECHIIKERTSETTKAMNSVNALCR 443
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG LG +++ +PLK GQ A + A +
Sbjct: 444 IGLTGTAIQNKYEELWTLLNWTNPGKLGPVTTWKKTISDPLKIGQSHDATLYELSKARKT 503
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L ++ LRR K I + K D VVFC +++ Q AY LL I+ +
Sbjct: 504 AKKLVENLLPQFFLRRMKS-LIADQLPKKIDRVVFCPLTETQSDAYENLLDSDIIRYIKE 562
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
CSCGS CC++ G + V P + +Q++SNHL ++ P D +
Sbjct: 563 SSELCSCGSRKKAGWCCQQYLQ-SGLRWQSY--VFPAMNVIQKLSNHLAILIPQGVDSKE 619
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E + PD +S + ++ + CGK + L +L+ W S GDK+L+
Sbjct: 620 KQDKDREWLE-IASPD-KWEQLYRTRDSIVNYANPEFCGKWKVLRRLLKWWHSNGDKVLV 677
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDGS R + VD+FNS P + VFLISTRAGG+G
Sbjct: 678 FSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLISTRAGGVG 737
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 738 LNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQ 797
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+ EI+
Sbjct: 798 QQANIGYNASSERRYFKGVQEKKDQKGEIFGLNNLFEYQNNNIVLREIV 846
>gi|397479836|ref|XP_003811210.1| PREDICTED: uncharacterized protein LOC100971761 [Pan paniscus]
Length = 1550
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/605 (40%), Positives = 360/605 (59%), Gaps = 27/605 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P +IN L ++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSDDGD----SIPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 164 AVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+ +F++ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+++NH+
Sbjct: 403 VLETEDVTLILQSSEPCTCRSGRKRRNCCYKT-NSHG--ETVKTLYLSYLTVLQKVANHV 459
Query: 466 ELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L++ KQ++ + VF D V +++ +F LSD K GKM+ L++
Sbjct: 460 ALLQAA---STSKQQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQ 515
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 516 LLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQD 575
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 576 VNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 635
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQ+YKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T
Sbjct: 636 TVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLT 695
Query: 703 SEIIE 707
+I+E
Sbjct: 696 KDILE 700
>gi|346970022|gb|EGY13474.1| DNA excision repair protein ERCC-6 [Verticillium dahliae VdLs.17]
Length = 1061
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/705 (36%), Positives = 393/705 (55%), Gaps = 28/705 (3%)
Query: 106 QFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
QFD + P +D E Y +PA + L ++Q GVKFL++L+ ++GG+LGDD
Sbjct: 163 QFDESAGVRPCRPCEDVELEYSGGVLPAPLARYLRDYQVAGVKFLHRLFVYQNGGVLGDD 222
Query: 164 MGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL A FGK ++ D ++ + D + + VLIICP S+I+NW+ E +
Sbjct: 223 MGLGKTVQVAAFLTAAFGKTGDARDGKRMRKMRRDARRWYPRVLIICPGSLIENWKNELN 282
Query: 220 RWSTFNVSIYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
RW +++ ++HG ++ +L A +E+++T++ +Y+ H S ++ + W+ V+ DE H
Sbjct: 283 RWGWWSIDLFHGSTAQKEDVLGAARAGMLEIMVTTYQTYKNHASSINTIQWDAVVADECH 342
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
LK +++ A ++ RIGLTGT +QN EL+ L +W PG GT +
Sbjct: 343 ALKRGSAEITKAMNQINALCRIGLTGTAIQNNYTELWTLLNWTNPGHFGTAGEWDRTIAG 402
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
PL+ GQ A +R A + LV +L + LRR K I H + K D VVFC ++
Sbjct: 403 PLRLGQSHDATFYQLRNARITAKKLVTNLLPGFFLRRMKS-LIAHQLPKKSDRVVFCPLT 461
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
+ Q+ AY+R + PEI+ L C+CGS + CC D ++ P +
Sbjct: 462 EDQRAAYKRFIGQPEIELLRTLSHHCACGSGKKRGWCC---DATVADGRSWQSIIFPSVT 518
Query: 457 KLQQISNHLELIKPNPRDEPD-KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
LQ+++NHL L+ P P EPD KQ + ++ + N ++ + L++ + C
Sbjct: 519 TLQKLANHLMLLVP-PSTEPDDKQARQTKILRDCCPETWQELLSN--RDAIMNLANPEFC 575
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK + L+KL+ W GDK+L+FS+SVR+L IL+ Y+ + LDGS RQ V
Sbjct: 576 GKWKVLKKLLKFWHENGDKVLVFSHSVRLLRILQHLFSNTSYNVTYLDGSLSYVERQRAV 635
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
DDFNS P + VFLIS +AGG+GLN+ +AN+VVI DP+WNP+ DLQAQDR++R GQ+R V
Sbjct: 636 DDFNSDPGQFVFLISAKAGGVGLNITAANKVVIVDPHWNPSYDLQAQDRAYRIGQRRDVD 695
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRD 695
VFRL+S+G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ+ + +GE+FG+ NLF
Sbjct: 696 VFRLVSSGTIEEIVYARQIYKQQQANIGYTASSERRYFQGVQEDENRKGEIFGLANLFTF 755
Query: 696 LSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDP 755
D L +I+ + E G++ ++ + T + K P
Sbjct: 756 RQDRLVIRDIV----NKTNIAEARAGNGIAVSGMDMEQAANDEETTWM-------KREGP 804
Query: 756 EMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLSS 800
E + + + R+ D QP + K ++I LSS
Sbjct: 805 EGGSAEDGGMSQLASLLTARDADGAAVQPQQRSAKSDAIQAILSS 849
>gi|238499559|ref|XP_002381014.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus
NRRL3357]
gi|220692767|gb|EED49113.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus
NRRL3357]
Length = 882
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 351/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 222 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 281
Query: 183 -DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + K + LI+CP ++I+NW E +RW ++V YHG N+++ L
Sbjct: 282 GDERDAKRMRKMRRSGKDQWYPRTLIVCPGTLIKNWMSELTRWGWWHVDTYHGDNKELAL 341
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ VE+LIT++ +Y + ++ V+W+ VI DE H +K S+ A + R
Sbjct: 342 HAARSGRVEILITTYGTYLQNKDSVNMVDWDCVIADECHIIKERTSETTKAMNSVNALCR 401
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG LG +++ +PLK GQ A + A +
Sbjct: 402 IGLTGTAIQNKYEELWTLLNWTNPGKLGPVTTWKKTISDPLKIGQSHDATLYELSKARKT 461
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L ++ LRR K I + K D VVFC +++ Q AY LL I+ +
Sbjct: 462 AKKLVENLLPQFFLRRMKS-LIADQLPKKIDRVVFCPLTETQSDAYENLLDSDIIRYIKE 520
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
CSCGS CC++ G + V P + +Q++SNHL ++ P D +
Sbjct: 521 SSELCSCGSRKKAGWCCQQYLQ-SGLRWQSY--VFPAMNVIQKLSNHLAILIPQGVDSKE 577
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E + PD +S + ++ + CGK + L +L+ W S GDK+L+
Sbjct: 578 KQDKDREWLE-IASPD-KWEQLYRTRDSIVNYANPEFCGKWKVLRRLLKWWHSNGDKVLV 635
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDGS R + VD+FNS P + VFLISTRAGG+G
Sbjct: 636 FSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLISTRAGGVG 695
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 696 LNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQ 755
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+ EI+
Sbjct: 756 QQANIGYNASSERRYFKGVQEKKDQKGEIFGLNNLFEYQNNNIVLREIV 804
>gi|302913263|ref|XP_003050881.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI
77-13-4]
gi|256731819|gb|EEU45168.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI
77-13-4]
Length = 1020
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/805 (34%), Positives = 423/805 (52%), Gaps = 57/805 (7%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+F+ + +P +D E P +PASI L ++Q GV FL++ + + GGILGDD
Sbjct: 140 KFEESSGIKPSRPYQDIELPQSAGLIPASIAQYLRDYQIAGVSFLHRKFVYQEGGILGDD 199
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL A FGK DE + + + + + Y +L++CP S+I NW+ E +
Sbjct: 200 MGLGKTVQVAAFLTAAFGKTGDERDAKRMRQIRQYNDRWYPRILVVCPGSLIMNWKNELN 259
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW +++ ++HG +++ +L A +E++IT++D+Y+ S ++ V W+ VI DE HRL
Sbjct: 260 RWGWWHIDLFHGIHKEDVLSAARAGRLEIVITTYDTYKNSRSSINMVQWDAVIADECHRL 319
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ RIGLTGT +QN+ EL+ L DW PG GT + + +PL
Sbjct: 320 KDRYSETTKALNEINALCRIGLTGTAIQNRYEELWTLLDWTNPGHFGTIAEWTQAVTKPL 379
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + +A + L +L +Y LRR K I H + K D VVFC ++DL
Sbjct: 380 TVGQSHDATVAQLSLARQTADKLAHNLLPRYFLRRMKT-LIAHQLPKKTDRVVFCPLTDL 438
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q+ AY L EI L PC CG + CC R + + +V P ++ L
Sbjct: 439 QRDAYENFLDSAEIDILRTLSEPC-CGKS-KKGWCCNRFLS---SGTRWQSIVFPSMIVL 493
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q+++NHL L+ P D K + + N + L + + CGK
Sbjct: 494 QKLANHLTLLVPQTTDVDTKHTSELNTLRTCMPDTWKHLYDN--RDRIKNLVNPEFCGKW 551
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+KL+ W S GDK+L+FS+SVR+L IL+ Y+ S LDGS RQ +VD F
Sbjct: 552 KVLKKLLKFWHSNGDKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEQRQEVVDTF 611
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 612 NSDPTQFVFLISTKAGGVGLNITSANKVVIIDPHWNPSYDLQAQDRAYRIGQTRDVEVFR 671
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L+S G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ E +GE+FG+ N+FR +D
Sbjct: 672 LISLGTVEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDTERKGEIFGLGNIFRYHND 731
Query: 699 NLFTSEII-----------------------ESHEEQG-QQQERHHCTNQGFKGLETHIV 734
+ +I+ + E G + E + G L +
Sbjct: 732 SGLLQDIVNKTNIAEAKAGVNLVDVDMEKAAKDEETLGIVKNEDTDAEDGGMSQLAALLT 791
Query: 735 SSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESI 794
S L S +K KS + +L G+ Y H N +++ G + +E+
Sbjct: 792 SENQEKLLESKKAKVPKSD------AIQAILTSAGVEYTHDNSEVI----GTSKVEEQLS 841
Query: 795 PQDLSSRPPPIHSKRRNLL------DCADGKESLASSKDRKNI-EYSLLARFMGM-DVFE 846
+ + +N L DC DG SL + + + + +AR G + E
Sbjct: 842 RRAAMTSYAEGDVDGQNALFAESDEDCGDGLHSLYNPPNEVMLRHFCEMAREFGFANATE 901
Query: 847 FSKWILSATPSAREKLLQDYRKRKK 871
F+ + + T AR L + KR++
Sbjct: 902 FALVVENWTQEARRNCLDTFYKRRE 926
>gi|390457773|ref|XP_002742800.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Callithrix jacchus]
Length = 912
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/641 (39%), Positives = 370/641 (57%), Gaps = 39/641 (6%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLV--LSKDGEYPIIQVPASINCRLL 138
+FDDE+ EK KF P P+ LS DG+ +P +IN L
Sbjct: 295 IFDDEDLEKPYFPNRKF--------------PSSPIAFKLSDDGD----SIPYTINRYLR 336
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS---------- 188
++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + +
Sbjct: 337 DYQREGAQFLYGHYIHGRGCILGDDMGLGKTVQVISFLAAVLQKKGTREDIENNMPEFLL 396
Query: 189 -TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVE 247
++ K+ K LI+ P SV+ NW+ E W F V++ HG +D L +++ E
Sbjct: 397 RSMNKEPSSTAKKIFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCE 456
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T++++ R+ L+ V W VIVDEAHR+KN K+++ LK RIGLTGTI+Q
Sbjct: 457 IALTTYETLRLCLDELNSVEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQ 516
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ + DW PG LG+ +F++ + +P++HGQR TA +R + + Q L +
Sbjct: 517 NNMKELWCVMDWAVPGLLGSNSYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMS 576
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 577 GWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSG 635
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+ CC + ++ L L L LQ+++NH+ L++ + ++ +
Sbjct: 636 RKRRNCCYKTNSHGETVKT---LYLSYLTVLQKVANHVALLQAVSTSK-QQETLIKRICD 691
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
VF D V ++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+
Sbjct: 692 QVFSRFPDFVQ-KTKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 750
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN + AN VV
Sbjct: 751 LQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFIGANVVV 810
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V +
Sbjct: 811 LFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSE 870
Query: 668 LEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 871 NAKRYFEAVQGSKEHQGELFGIHNLFKLRSQGSCLTKDILE 911
>gi|83772693|dbj|BAE62821.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869387|gb|EIT78586.1| transcription-coupled repair protein CSB/RAD26 [Aspergillus oryzae
3.042]
Length = 867
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/589 (40%), Positives = 351/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q +G FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 222 YSLGLIPAPIAQWLRQYQVDGAAFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 281
Query: 183 -DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + K + LI+CP ++I+NW E +RW ++V YHG N+++ L
Sbjct: 282 GDERDAKRMRKMRRSGKDQWYPRTLIVCPGTLIKNWMSELTRWGWWHVDTYHGDNKELAL 341
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ VE+LIT++ +Y + ++ V+W+ VI DE H +K S+ A + R
Sbjct: 342 HAARSGRVEILITTYGTYLQNKDSVNMVDWDCVIADECHIIKERTSETTKAMNSVNALCR 401
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG LG +++ +PLK GQ A + A +
Sbjct: 402 IGLTGTAIQNKYEELWTLLNWTNPGKLGPVTTWKKTISDPLKIGQSHDATLYELSKARKT 461
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L ++ LRR K I + K D VVFC +++ Q AY LL I+ +
Sbjct: 462 AKKLVENLLPQFFLRRMKS-LIADQLPKKIDRVVFCPLTETQSDAYENLLDSDIIRYIKE 520
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
CSCGS CC++ G + V P + +Q++SNHL ++ P D +
Sbjct: 521 SSELCSCGSRKKAGWCCQQYLQ-SGLRWQSY--VFPAMNVIQKLSNHLAILIPQGVDSKE 577
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E + PD +S + ++ + CGK + L +L+ W S GDK+L+
Sbjct: 578 KQDKDREWLE-IASPD-KWEQLYRTRDSIVNYANPEFCGKWKVLRRLLKWWHSNGDKVLV 635
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDGS R + VD+FNS P + VFLISTRAGG+G
Sbjct: 636 FSHSVRLLRMLQMLFHHTSYNVSYLDGSMSYEDRATAVDEFNSDPRQFVFLISTRAGGVG 695
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 696 LNITSANKVVVVDPNWNPSYDLQAQDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQ 755
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF ++N+ EI+
Sbjct: 756 QQANIGYNASSERRYFKGVQEKKDQKGEIFGLNNLFEYQNNNIVLREIV 804
>gi|320035113|gb|EFW17055.1| DNA excision repair protein [Coccidioides posadasii str. Silveira]
Length = 1011
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/687 (37%), Positives = 387/687 (56%), Gaps = 41/687 (5%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + VPA I L ++Q EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 206 YSLGLVPAPIAQWLRDYQVEGASFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 265
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ +KG LIICP ++IQNW E SRW ++V +YHG ++
Sbjct: 266 GDERDAKRMR--KIRRKGDSIWYPRSLIICPGTLIQNWRSELSRWGWWSVEVYHGDTKEE 323
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+LIT++ +YR++ L+ V W+ V+ DE H +K+ +S+ + EL
Sbjct: 324 ALQSAISGRVEILITTYTTYRMNKDSLNMVEWDCVVADECHLMKDRRSETAKSMHELNAL 383
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 384 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPASTWKTTISDPLKIGQSHDATVYQLSKAR 443
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC +++ Q AY LL I+C+
Sbjct: 444 KTAKKLVKNLLPAFFLRRMKT-LIADQLPRKSDRVVFCPLTETQADAYENLLDSAMIECI 502
Query: 416 INKDLPCSCGSPLTQVECC-KRLDNLDGCDSCPF-CLVLPCLVKLQQISNHLELIKPNPR 473
PC CGS CC KR+ P+ V P + LQ++ NH + P
Sbjct: 503 KMSSDPCPCGSKKKAGWCCYKRIPG-----GGPWQNYVFPAISNLQKLCNHPATLIPQST 557
Query: 474 DEPDKQRKD-AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D +KQ KD A L AV +L S + S+ + CGK + L+KL+ W + G
Sbjct: 558 DPEEKQEKDLAMLEVAVPDQWRELYRTRG---SILNYSNPEFCGKWKVLKKLLKWWHANG 614
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
DK+L+FS+SVR+L +L+ Y+ S LDG+ R +VDDFN+ P + VFLIST+
Sbjct: 615 DKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFLISTK 674
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ+R V VFRL+SAG++EE+VY R
Sbjct: 675 AGGVGLNITSANKVVVVDPNWNPSHDLQAQDRAYRIGQRRDVEVFRLVSAGTIEEIVYAR 734
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----S 708
Q+YKQQ +NI + E+RYF+GVQ+ K+ +GE+FG+ NLF +N+ +I+ +
Sbjct: 735 QIYKQQQANIGYNASTERRYFKGVQEKKDQKGEIFGLRNLFEYKDNNIVLRDIVNKTNVA 794
Query: 709 HEEQG------QQQERHHCTNQGFKGLETHIVSS---------KDSNTLLSTGSKTRKSS 753
+ G + ER N+ + + + + +D + + + +S
Sbjct: 795 ESKAGVDVVDFEIDERGDDENKTLESTDAYTEDATMSQLAALVQDGSDAIKKWGEKDRSV 854
Query: 754 DPEMARTSKPLLEDMGIVYAHRNDDIV 780
P + +L G+ Y H N +++
Sbjct: 855 TPARHDPIQAILASAGVEYTHENSEVI 881
>gi|156055468|ref|XP_001593658.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980]
gi|154702870|gb|EDO02609.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1012
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/587 (40%), Positives = 360/587 (61%), Gaps = 13/587 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PASI L ++Q +GVKFL++ + + GGILGDDMGLGKT+Q AFL A FGK DE
Sbjct: 204 IPASIAQYLRDYQVDGVKFLHEKFVYQKGGILGDDMGLGKTVQVAAFLTAAFGKTGDERD 263
Query: 187 DSTILK-DNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
+ + K NK + + Y VLI+CP S+IQNW+ E +RW ++V +HG ++ +L
Sbjct: 264 EKRMRKVKNKDEGRWYPRVLIVCPGSLIQNWKNELTRWGWWHVEKFHGNVKEKEPVLRSA 323
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
++ VE++IT++ +Y+ + L+ ++W+ V+ DE H+LK S A E+ RIGL
Sbjct: 324 QSGRVEIVITTYSTYKNYKDELNTISWDCVVADECHQLKERTSLTTQAMNEVNALCRIGL 383
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QNK EL+ L +W +PG +G + EPL+ GQ + + ++ A E +
Sbjct: 384 TGTAIQNKYEELWTLLNWCSPGKVGPLATWVSTISEPLRIGQSHDSTNQQVKRARETAKR 443
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
LV L + R + I H + K D ++ C ++DLQ+ AY R L+ +Q + + P
Sbjct: 444 LVNNLMPHFFLRRMKTLIAHQLPKKTDRLLPCPLTDLQRDAYERFLESDIVQLVKSHGEP 503
Query: 422 CSCGS--PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CG+ LT+ CC + G + +V P + LQ++SNHL L+ PN D +KQ
Sbjct: 504 CDCGNGKKLTRGACC--YSKISGTNIKWQAMVFPIMTTLQKLSNHLALLLPNDGDPREKQ 561
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+D + + PD A++ S LS+ + CGK + L+KL+ W +GDK+L+FS
Sbjct: 562 ERDLDFLQKML-PDRWEELYKARD-SIANLSNPEFCGKWKVLKKLLKHWHEEGDKVLIFS 619
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
+SV++L +L+ Y+ S L G RQ VDDFN P++ +FLIST+AGG+GLN
Sbjct: 620 HSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNYDPNQFIFLISTKAGGVGLN 679
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
+ SAN+VVIFDPNWNP+ DLQAQDR++R GQ R V FRL+SAG++EE+VY RQ+YKQQ
Sbjct: 680 ITSANKVVIFDPNWNPSYDLQAQDRAYRIGQLRDVDSFRLVSAGTIEEVVYARQIYKQQQ 739
Query: 660 SNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+NI + +E+RYF+GVQ+ +GE+FG+ NL ++ + +I+
Sbjct: 740 ANIGYNASMERRYFKGVQNAVGQKGEIFGLDNLLSFHAEEILLRDIV 786
>gi|325092609|gb|EGC45919.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1032
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/589 (39%), Positives = 348/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q +GV+FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 223 YSLGLIPAPIAQWLRDYQVQGVEFLHELFVYQKGGILGDDMGLGKTVQIIAFLTAAYGKT 282
Query: 183 --DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
+ + + D+ Y LI+CP +++QNW E RW +++ +YHG ++ L
Sbjct: 283 GDERDAKRMRKMRRRGDRVWYPRTLIVCPGTLLQNWRSELDRWGWWHIEVYHGAGKEEAL 342
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + +E+++T++ +Y ++ L+ V W+ ++ DE H K KS+ + E+ R
Sbjct: 343 QSAASGRLEIMLTTYKTYVLNKDALNMVEWDCIVADECHIFKERKSETAQSMNEINALCR 402
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IG+TGT +QNK EL+ L +W PG G ++ EPLK GQ A + A +
Sbjct: 403 IGVTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICEPLKLGQSHDATVYQLSKARKT 462
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 463 ARKLVENLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIEYIKT 521
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
C CGS CC R+ G + V P + LQ++SNHL ++ P +D +
Sbjct: 522 SSDKCHCGSGKKSGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDPTE 578
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK R L+KL+ W GDK+L+
Sbjct: 579 KQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLV 636
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDG+ R +VD+FN+ + VFLISTRAGG+G
Sbjct: 637 FSHSVRLLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADIREFVFLISTRAGGVG 696
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 697 LNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQ 756
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+GVQ+ K+ GE+FG+ N+F+ D++ +I+
Sbjct: 757 QQANIGYTASTERRYFKGVQEKKDRNGEIFGLSNMFQYQGDSIVLRDIV 805
>gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Anolis carolinensis]
Length = 756
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/643 (39%), Positives = 373/643 (58%), Gaps = 40/643 (6%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK F +L P LSKDG Q+P +IN L ++Q
Sbjct: 74 IFDDEDLEKPY----FPDRRL-------PSPAVGFQLSKDGH----QIPYTINRYLRDYQ 118
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD------ESSDSTILKDNK 195
REG +FL+ Y K G ILGDDMGLGKT+Q I+FLAA+ K E++ L+ K
Sbjct: 119 REGAQFLHGHYVRKRGCILGDDMGLGKTVQVISFLAAMLNKKGARADIENNMPEFLRTMK 178
Query: 196 -----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLI 250
V KK + LI+ P SV+ NW+ E W F V + HG +D L +++ E+ +
Sbjct: 179 NEMSSVPKKIF-LIVSPLSVLYNWKDELDTWGYFKVIVLHGNKKDYELNRIKKGKCEIAL 237
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
T++++ R+ L+ + W VIVDE HR+KN K+++ L + R+GLTGTI+QN +
Sbjct: 238 TTYETLRLFLDELNSLEWSAVIVDEVHRIKNPKAQITQTMKALTCKVRLGLTGTILQNNM 297
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ + DW PG LG F++ + +P++HGQR TA +R + + Q L + Y
Sbjct: 298 KELWCVMDWAVPGLLGNEARFKKEFSDPVEHGQRHTATKRELATGRKAMQKLAKQMSGYF 357
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRTK I + KED +V+C++++ Q+ Y+ +L+ +++ ++ PCSC S +
Sbjct: 358 LRRTKA-LINDQLPKKEDRMVYCSLTEFQRAVYKAVLETEDVRLVLQARKPCSCNSGRKR 416
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA--ELASA 488
CC + N+ G L L L++I+NH L++ D KQ++ +
Sbjct: 417 KNCCYK-TNVHG--ETMQALYFSYLTILRKIANHTGLLQI---DNTSKQQEAHIRRVCEE 470
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
VF D V +++ +F +SD K GKM+ L+KL+ + DK+LLFS+S ++LD+L
Sbjct: 471 VFSKFPDFVQ-LSKDAAFETISDPKYSGKMKVLQKLLNHFRKNKDKVLLFSFSTKLLDVL 529
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
E++ + G + RLDG+T + R +V +FN + L+ST AGGLGLN V AN V++
Sbjct: 530 EQYCMASGLDYRRLDGNTKAEDRVKIVKEFNGMEEVNICLVSTMAGGLGLNFVGANIVIL 589
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKL 668
FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V +
Sbjct: 590 FDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEMMYLRQVYKQQLHCVVVGSEN 649
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSDN--LFTSEIIESH 709
KRYFE VQ KE QGELFGI NLFR D+ T EI+E H
Sbjct: 650 AKRYFEAVQGSKEHQGELFGIHNLFR-FQDHGSCLTKEILEDH 691
>gi|348565314|ref|XP_003468448.1| PREDICTED: hypothetical protein LOC100728605 [Cavia porcellus]
Length = 1526
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/629 (40%), Positives = 369/629 (58%), Gaps = 37/629 (5%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+S +FDDE+ EK ++ + L F LS+DG+ +P +IN L
Sbjct: 66 RSFIFDDEDLEKPYFPDR--KFPLSSNDFK---------LSEDGDV----IPYTINRYLR 110
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN---- 194
++QREG +FLY+ Y G ILGDDMGLGKT+Q I+FLAAV K + + +++N
Sbjct: 111 DYQREGAQFLYRHYIQGRGCILGDDMGLGKTVQVISFLAAVLHKKGTRED--IENNMPEF 168
Query: 195 ---KVDK-------KGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEAC 244
+V K K LI+ P SV+ NW+ E W F V+I HG +D L ++
Sbjct: 169 LLRRVKKEPTSSTIKKMFLIVAPLSVLYNWKDELDTWGYFRVTIVHGNKKDNELIRVRQR 228
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
E+ +T++++ R+ L+ V W VIVDEAHR+KN K+++ A LK RIGLTGT
Sbjct: 229 KCEIALTTYETLRLCLDELNSVEWSAVIVDEAHRIKNPKARVTEAMKALKCDIRIGLTGT 288
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
I+QN + EL+ + DW PG LG+R HF++ + +P++HGQ+ TA +R + + L A
Sbjct: 289 ILQNNMKELWCVMDWAVPGLLGSRIHFQKQFSDPVEHGQKHTATKRELATGRRAMRRLAA 348
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
+ LLRRTK G L KED +V+C+++D QK Y+ +L+ ++ ++ PC+C
Sbjct: 349 RMSGCLLRRTKALISGQLPK-KEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSKPCTC 407
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
S + CC + N G L L LQ+++NH+ L++ ++
Sbjct: 408 NSGRKRRNCCYKT-NSHG--EAVKALYFSYLAVLQKVANHVALLQAASTSR-HQETLIKR 463
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+ VF D V +++ +F LSD K GKM+ L++L+ + DK+LLFS+S ++
Sbjct: 464 ICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRKNKDKVLLFSFSTKL 522
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSAN 604
LD+L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN
Sbjct: 523 LDVLQQYCMASGLDYRRLDGSTKSEERLRIVKEFNSTQDVNICLVSTMAGGLGLNFVGAN 582
Query: 605 RVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
V++FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V
Sbjct: 583 VVILFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVV 642
Query: 665 SGKLEKRYFEGVQDCKEFQGELFGICNLF 693
+ KRYFE VQ KE +GELFG NLF
Sbjct: 643 GSENAKRYFEAVQGSKEHRGELFGTHNLF 671
>gi|407919841|gb|EKG13063.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 997
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/586 (41%), Positives = 350/586 (59%), Gaps = 15/586 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSD 187
+PA+ L ++Q +GV+FL + + + GGILGDDMGLGKTIQ IAFL A FGK + D
Sbjct: 209 IPAAHAQWLRDYQIKGVEFLTEKFVYQRGGILGDDMGLGKTIQVIAFLTAAFGKTCDERD 268
Query: 188 STILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEA 243
++ + D + Y VLI+CP ++++NW+ E W +++ YHG ++D +
Sbjct: 269 QKRMRKMRQDGRDYPRVLIVCPGTLLENWKSELDDWGWWHIYTYHGSPADKDAAVRAALK 328
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
E+++T++ +YR + S ++ V+W+ VI DE H +K+ S++ A E+ RIGLTG
Sbjct: 329 GRAEIVLTTYTTYRNNRSEINMVDWDCVIADECHIIKSRTSEITQAMNEVNALCRIGLTG 388
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN EL+ L +W PG G ++ EPLK GQ A + + A + Q LV
Sbjct: 389 TAIQNNYYELWTLLNWTNPGRFGGLATWKHCISEPLKMGQAHDATYQQLAKARKTAQSLV 448
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+L ++ LRR K I H + K D VVFC +++ Q AY + ++ + C
Sbjct: 449 NNLLPQFFLRRMKS-LIAHELPKKSDRVVFCPLTESQAEAYENYVNTELVEHVRQSTEIC 507
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
C S + CC + G LV P + LQ+++NHL LI P+ D +KQ +D
Sbjct: 508 DCDSGKKRGWCC--YVEVPGHGKWQ-NLVFPAMATLQKLTNHLALIIPSSIDSNEKQARD 564
Query: 483 AE-LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ L ++ DL Q ++ + + CGK + L++L+ W S GDK+L+FS+S
Sbjct: 565 LDDLQISMPNQWKDLY---RQRDNITNFAKQEYCGKWKVLKRLLQFWYSNGDKVLVFSHS 621
Query: 542 VRMLDILEK-FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
VR+L +L F Y+ S LDGS RQ V+DFN+ P + VFLISTRAGG+GLN+
Sbjct: 622 VRLLQMLRMLFTSTTTYNVSYLDGSMKYEDRQQAVNDFNADPKQFVFLISTRAGGVGLNI 681
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SAN+VV+FDPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +
Sbjct: 682 TSANKVVVFDPNWNPAYDLQAQDRAYRIGQLRDVEVFRLISAGTIEEIVYARQIYKQQQA 741
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
NI S E+RYF GVQD KE QGE+FG+ NLF DN+ +I+
Sbjct: 742 NIGYSASNERRYFRGVQDQKEKQGEIFGLANLFSYKGDNIVLRDIV 787
>gi|395819328|ref|XP_003783046.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Otolemur garnettii]
Length = 702
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/589 (40%), Positives = 353/589 (59%), Gaps = 22/589 (3%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS+DG+ +P +IN L ++QREG +FLY Y G ILGDDMGLGKT+Q I+FLA
Sbjct: 109 LSEDGD----SIPYTINRYLRDYQREGAQFLYGHYIKGRGCILGDDMGLGKTVQVISFLA 164
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + + LI+ P SV+ NW+ E W F
Sbjct: 165 AVLHKKGTREDIENNMPEFLLRSMKKEPPSSTARKMFLIVAPLSVLYNWKDELDTWGYFR 224
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 225 VTVLHGNKKDNELIRIKQRKCEIALTTYETLRLCLDELNSLEWSGVIVDEAHRIKNPKAR 284
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++HGQR
Sbjct: 285 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRTHFKKQFSDPVEHGQRH 344
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + + L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 345 TATKRELATGRKAMRRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 403
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ +++ PC+C S + CC + N G L L LQ+++NH+
Sbjct: 404 VLETEDVTLILHSSEPCTCSSGRKRRNCCYK-TNSQG--ETVKTLYFSYLAVLQKVANHV 460
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
L++ + ++ + VF D V +++ +F LSD K GKM+ L++L+
Sbjct: 461 ALLQ-SASTSKQQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLL 518
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 519 NHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVN 578
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++
Sbjct: 579 ICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLVSLGTV 638
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
EE++Y RQVYKQQL + V + KRYFE VQ KE QGELFGI NLFR
Sbjct: 639 EEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFR 687
>gi|71004894|ref|XP_757113.1| hypothetical protein UM00966.1 [Ustilago maydis 521]
gi|46096494|gb|EAK81727.1| hypothetical protein UM00966.1 [Ustilago maydis 521]
Length = 1124
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 278/727 (38%), Positives = 394/727 (54%), Gaps = 53/727 (7%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PL+L+ P ++VPASIN L +QR+GV+FLY+ Y G +LGDDMGLGKTIQ IA
Sbjct: 271 PLILA-----PGVEVPASINRFLRSYQRDGVRFLYRSYAQGRGALLGDDMGLGKTIQVIA 325
Query: 175 FLAAVF---GKDESSDSTI--LKDNKVDKKGY--------VLIICPSSVIQNWEIEFSRW 221
FL+A+ G++E +D I ++ ++ + LIICPSSVI NW EF W
Sbjct: 326 FLSAIMVKTGREEDADRRIEAIRSDRQSSDYHRANAIWPTCLIICPSSVIDNWRHEFDTW 385
Query: 222 STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
F + Y G L+ +++L+TS ++ + L +++ V++DEAH+LKN
Sbjct: 386 GYFEHAAYSGTRAKDALDSFRRGRLDILVTSHETASLSIEHLRDLDLSCVLIDEAHKLKN 445
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
S++ A + + R LTGT +QN ELY L DW PG LGT + + + PLKH
Sbjct: 446 PSSQMTQAMQTFRCKVRYALTGTAIQNTYRELYTLADWANPGLLGTVKEWITEIEVPLKH 505
Query: 342 GQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
GQ+ A I A R + LV VL + LRRTK I + K D +VFC ++ Q
Sbjct: 506 GQKRGADPEHIADARTRAEKLVTNVLPIFFLRRTKA-LIADQLPRKFDKIVFCPLTPTQL 564
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCG--SPLTQV-----ECCKRLDNLDGCDSCPFCLVLP 453
Y+R+L E+ + PC CG P T + CC + D+ G + +L
Sbjct: 565 DVYKRILSEDEVDLMKRHADPCDCGRLDPDTGLAYRRQNCCFKRDSTGGAWNKN---MLK 621
Query: 454 CLVKLQQISNHLELIKPNPRD----EPDKQRKDAELASAV---FGPDIDLVGGNAQNESF 506
+ LQ+ SNH+ L+ P+P D +PD+ + S V F NA N
Sbjct: 622 YIYLLQKCSNHVALVFPDPEDASSKDPDRMERYHRQLSYVQLMFPDSWQSKRCNAAN--- 678
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
G+ + + CGK + L ++ W + GDK+LLFS ++R+L +E FL R+G++F RLDG+T
Sbjct: 679 -GM-EPELCGKWKVLAGMLAQWHANGDKVLLFSTNLRLLQFIEFFLSREGHNFLRLDGTT 736
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
P RQ LV+ FN S VFLIST AGG GLNL SANRVV+FDP+WNP+ DLQA DR++
Sbjct: 737 PQPRRQQLVNQFNRDASIFVFLISTTAGGTGLNLTSANRVVVFDPHWNPSHDLQAMDRAY 796
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGEL 686
RFGQ R V V+RL+ AGSLEE++Y RQ+YKQQ I + E+RYFEGV + GEL
Sbjct: 797 RFGQSRDVYVYRLIGAGSLEEVIYGRQIYKQQQMEIGYNATKERRYFEGVAGDQGSLGEL 856
Query: 687 FGICNLFRDLSDNLFTSEIIE--SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTL-L 743
FG NLF +L II+ + E E++ T + +K S L
Sbjct: 857 FGCKNLFTLHESSLAMKSIIDQCNISEVTFALEQYLLAGSLEDPAATGVTLTKHSGILGA 916
Query: 744 STGSKTRKSSDPEMA-RTS-------KPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIP 795
TR D ++A RT+ + +LE GI Y+H + +V +++
Sbjct: 917 DVADPTRYVEDGDVAQRTASVDDDPIRSILEGSGISYSHDHAALVGNSAAEAALYKKAAR 976
Query: 796 QDLSSRP 802
+ +SSRP
Sbjct: 977 RPVSSRP 983
>gi|115442660|ref|XP_001218137.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188006|gb|EAU29706.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1063
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/621 (38%), Positives = 359/621 (57%), Gaps = 15/621 (2%)
Query: 91 EQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYK 150
+ E+ +F R + + P++ + L Y + VPA I L ++Q +G FL++
Sbjct: 254 DDERLEFLREKPAFTAMNPCSPYKDITLP----YSLGLVPAPIAQWLRQYQVDGAAFLHE 309
Query: 151 LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGY---VLIIC 206
L+ + GGILGDDMGLGKT+Q IAFL A +GK + D+ ++ + G+ LI+C
Sbjct: 310 LFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKTGDERDAKRMRKMRRSGHGWYPRTLIVC 369
Query: 207 PSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEV 266
P ++I+NW EF RW ++V YHG ++++ L+ + +EVLIT++ +Y + ++ V
Sbjct: 370 PGTLIRNWMAEFDRWGWWHVDSYHGDSKELALQAARSGRLEVLITTYSTYLHNKDAINMV 429
Query: 267 NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLG 326
W+ VI DE H +K S+ A E+ RIGLTGT +QNK EL+ + +W PG LG
Sbjct: 430 EWDCVIADECHIIKERTSETTKAMNEVNALCRIGLTGTAIQNKYEELWTILNWSNPGKLG 489
Query: 327 TREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMG 385
++ EPL+ GQ A + A + + LV +L ++ LRR K I +
Sbjct: 490 PVTTWKRTISEPLRIGQSHDATLHQLSRARKTAKKLVQNLLPQFFLRRMKS-LIADQLPK 548
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K D VVFC ++D Q AY ++ I + C CGS CC +L S
Sbjct: 549 KIDRVVFCPLTDTQADAYENIVNSDIITYIKQSSEKCDCGSGKKAGWCC--YTHLPSGRS 606
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
V P + LQ++SNHL ++ P D DKQ KD E+ PD +S
Sbjct: 607 WQ-SYVFPAMAVLQKLSNHLAILIPQAIDSNDKQEKDKEMLEIAV-PD-QWQQLYRTRDS 663
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
+ ++ CGK + L +L+ W + GDK+L+FS+SVR+L +L+ Y+ S LDGS
Sbjct: 664 IVNYANPDFCGKWKVLRRLLKWWHANGDKVLVFSHSVRLLKMLQMLFHHTSYNVSYLDGS 723
Query: 566 TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
+ R V++FN+ P + VFLISTR+GG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR+
Sbjct: 724 MNYDDRAKAVNEFNADPRQFVFLISTRSGGVGLNITSANKVVVMDPNWNPSYDLQAQDRA 783
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGE 685
+R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+GV + K+ +GE
Sbjct: 784 YRIGQSRDVEVFRLISAGTVEEIVYARQIYKQQQANIGYNASSERRYFKGVMEKKDQKGE 843
Query: 686 LFGICNLFRDLSDNLFTSEII 706
+FG+ NLF + N+ +I+
Sbjct: 844 IFGLNNLFEYQNKNIVLRDIV 864
>gi|332222825|ref|XP_003260570.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
isoform 1 [Nomascus leucogenys]
Length = 701
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/645 (39%), Positives = 372/645 (57%), Gaps = 40/645 (6%)
Query: 79 KSNVFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRL 137
+S +FDDE+ EK KF + LS DG+ +P +IN L
Sbjct: 80 RSLIFDDEDLEKPYFPNRKFPSSSVA------------FKLSDDGD----SIPYTINRYL 123
Query: 138 LEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------I 190
++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +
Sbjct: 124 RDYQREGARFLYGHYIHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFL 183
Query: 191 LKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACG 245
L+ K + K LI+ P SV+ NW+ E W F V+I HG +D L +++
Sbjct: 184 LRSMKKEPPSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTILHGNRKDNELIRVKQRK 243
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
E+ +T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI
Sbjct: 244 CEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCSVRIGLTGTI 303
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN EL+ + DW PG LG+R +F++ + +P++ GQR TA +R + + Q L
Sbjct: 304 LQNNTKELWCVMDWAVPGLLGSRTYFKKQFSDPVEQGQRHTATKRELATGRKAMQRLAKK 363
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
+ + LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C
Sbjct: 364 MSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCR 422
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--A 483
S + CC + ++ L L L LQ+++NH+ L++ KQ++
Sbjct: 423 SGRKRRNCCYKTNSHGETVKT---LYLSYLTVLQKVANHVALLQAA---STSKQQETLIK 476
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S +
Sbjct: 477 RICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTK 535
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSA 603
+LD+L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V A
Sbjct: 536 LLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGA 595
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
N VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL +
Sbjct: 596 NVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVV 655
Query: 664 VSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
V + KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 656 VGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKDILE 700
>gi|388851519|emb|CCF54921.1| related to RAD26-DNA repair and recombination protein [Ustilago
hordei]
Length = 1127
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 276/712 (38%), Positives = 384/712 (53%), Gaps = 65/712 (9%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
+PL L+ P VPASIN L +QR+GV+FLY+ Y G +LGDDMGLGKTIQ I
Sbjct: 270 DPLELA-----PGFAVPASINRFLRSYQRDGVRFLYRSYAENRGALLGDDMGLGKTIQVI 324
Query: 174 AFLAAVF---GKDESSDSTILKDNKVDKKG----------YVLIICPSSVIQNWEIEFSR 220
AFL+A+ G++E +D I ++ LIICPSSVI NW E
Sbjct: 325 AFLSAIMRKTGREEDADRRIEAVRSDRQRADYHRANAVWPTCLIICPSSVIDNWRHELDT 384
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W F + + G LE +++L+TS ++ + L +++ V++DEAH+LK
Sbjct: 385 WGYFEHAAFSGTRAKNALESFRRGRLDILVTSHETASLSIEHLRDLDLSCVLIDEAHKLK 444
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N S++ A + + R LTGT +QN ELY L DW PG LGT + + +EPLK
Sbjct: 445 NPNSQMTKAMQIFRCKARFALTGTAIQNTYRELYTLADWTNPGLLGTVKEWITEIEEPLK 504
Query: 341 HGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
GQR A I A R + LV VL + LRRTK I + K D +VFC ++ Q
Sbjct: 505 QGQRRGADREHIADARTRAEKLVTNVLPIFFLRRTKA-LIADQLPHKFDKIVFCPLTSTQ 563
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCG--SPLTQV-----ECC-KRLDNLDGCDSCPFCLV 451
Y+R+L E+ + PC CG P T + CC KR DG +
Sbjct: 564 LEVYKRILSEDEVDLMKRHADPCDCGRLDPETGLAYRRQNCCFKR----DGKGEAWNKNM 619
Query: 452 LPCLVKLQQISNHLELIKPNPRD----EPDK-QRKDAELASA--VFGPDIDLVGGNAQNE 504
L + LQ+ SNH+ L+ P+P D EPD+ +R D +L+ +F NA N
Sbjct: 620 LKYIYLLQKCSNHVALVFPDPEDASSREPDRMERYDRQLSYVQLMFPDSWQSKRCNAAN- 678
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
G+ + + CGK + L L+ W + GDK+LLFS ++R+L +E FL R+G++F RLDG
Sbjct: 679 ---GM-EPEFCGKWKVLTGLLSQWHADGDKVLLFSTNMRLLQFIEFFLAREGHNFLRLDG 734
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
STP RQ LV+ FN S VF+IST AGG GLNL SANRVV+FDP+WNP+ DLQA DR
Sbjct: 735 STPQPRRQQLVNQFNRDSSIFVFVISTTAGGTGLNLTSANRVVVFDPHWNPSHDLQAMDR 794
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
++RFGQ R V V+RL+ AGSLEE++Y RQ+YKQQ I + E+RYFEGV + G
Sbjct: 795 AYRFGQARDVYVYRLIGAGSLEEVIYGRQLYKQQQMEIGYNATKERRYFEGVAGDQGSLG 854
Query: 685 ELFGICNLF---------RDLSDNLFTSEI---IESHEEQG----QQQERHHCTNQGFKG 728
ELFG NLF + + D SE+ +E + + G Q +
Sbjct: 855 ELFGCKNLFTLHESSLAMKSIIDECNISEVTFALEQYLKAGSLDDQDSADAAFVERAHSQ 914
Query: 729 LETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
E+ + S+++S +T T ++P + +LE GI Y+H + +V
Sbjct: 915 QESRLTSTQNSARADTTAQPTSVGANP-----IRSILEGSGIAYSHDHAALV 961
>gi|344271724|ref|XP_003407687.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Loxodonta africana]
Length = 713
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/660 (38%), Positives = 373/660 (56%), Gaps = 38/660 (5%)
Query: 63 LPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLV--LSK 120
+P Q + + ++ +FDDE+ EK + D P + LS+
Sbjct: 76 VPLQRLQEVKSVKDCSRNFIFDDEDLEKP-------------YFPDRKFPSSAIAFKLSE 122
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG+ +P +IN L ++QREG +FLY Y G ILGDDMGLGKT+Q I+FLAAV
Sbjct: 123 DGDC----IPYTINRYLRDYQREGAQFLYGHYIQGRGCILGDDMGLGKTVQVISFLAAVL 178
Query: 181 GKDESSDST-------ILKDNK-----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI 228
K + + +L+ K K LI+ P SV+ NW E W F V +
Sbjct: 179 HKKGTREDIENNMPEFLLRSMKKETPSCTAKKMFLIVAPLSVLYNWRDELDTWGYFRVIV 238
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
HG +D L +++ E+ +T++++ R+ + + W VIVDEAHR+KN +++
Sbjct: 239 LHGNKKDSELIRVKQGKCEIALTTYETLRLCLDEFNSLEWSAVIVDEAHRIKNPTARVTE 298
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA
Sbjct: 299 VMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRSHFKKQFSDPVEHGQRHTAT 358
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
+R + + + L + + LRRTK I + KED +V+C+++D QK Y+ +L+
Sbjct: 359 KRELATGRKAMRRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLE 417
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
+I ++ PC+C S + CC + N G L L LQ+++NH+ L+
Sbjct: 418 TEDITLILRSSEPCTCNSGRKRRNCCYK-TNSQG--ETVKTLYFSYLAVLQKVANHVALL 474
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
+ E K + + VF D V +++ +F +SD K GKM+ L++L+
Sbjct: 475 QAASTSEQQKTLI-SRICDQVFSRFPDFVR-KSKDAAFETISDPKYSGKMKVLQQLLNHC 532
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL 588
DK+LLFS+S ++LD+L+++ + G F RLDGST S R +V +FNS+ + L
Sbjct: 533 RKNKDKVLLFSFSTKLLDVLQQYCMAAGLDFRRLDGSTKSEERIKIVKEFNSAQDVNICL 592
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE+
Sbjct: 593 VSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEI 652
Query: 649 VYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
+Y RQVYKQQL + V + KRYFE VQ KE +GELFGI NLF+ S + T +I+E
Sbjct: 653 MYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGIHNLFKLRSQGSCLTRDILE 712
>gi|426362392|ref|XP_004048351.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Gorilla gorilla gorilla]
Length = 701
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/605 (40%), Positives = 359/605 (59%), Gaps = 27/605 (4%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P +IN L ++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSDDGD----SIPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 164 AVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+ +FR+ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFRKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQRLAEKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+++NH+
Sbjct: 403 VLETEDVTLILQSSEPCTCRSGRKRRNCCYK-TNSHG--ETVKTLYLSYLTVLQKVANHV 459
Query: 466 ELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L++ KQ+ + VF D V +++ +F LSD K GKM+ L++
Sbjct: 460 ALLQAA---STSKQQDTLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQ 515
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 516 LLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQD 575
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 576 VNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 635
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQ+YKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T
Sbjct: 636 TVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLT 695
Query: 703 SEIIE 707
+I+E
Sbjct: 696 KDILE 700
>gi|452003218|gb|EMD95675.1| hypothetical protein COCHEDRAFT_1166016 [Cochliobolus
heterostrophus C5]
Length = 1067
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/695 (38%), Positives = 391/695 (56%), Gaps = 54/695 (7%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD--ESS 186
+PA I L ++Q EGV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK E
Sbjct: 252 IPAPIAQWLRDYQVEGVQFLHEKFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKTGTERD 311
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG---PNRDMILEK 240
+ K + DK + VLI+CP +++QNWE E S+W + V YHG +R +L
Sbjct: 312 AKCMRKIRRFDKNRWYPRVLIVCPGTLMQNWEDELSKWGWWEVYRYHGSSAADRKGVLGA 371
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E++IT++ +YR + S ++ V+W+ VI DE H++K++ +++ A ++ RIG
Sbjct: 372 AAKGMLEIMITTYTTYRNNESEINTVDWDCVIADECHQIKSKNAEITRAMNKINALCRIG 431
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QNK E++NL +W PG+ G+ + +++ PLK GQ A + A R Q
Sbjct: 432 LTGTAIQNKYEEIWNLLNWARPGAYGSSQEWKQKISLPLKMGQAHDATNAQLADARSRAQ 491
Query: 361 HLV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
LV +L LRR K I + K D VVFC ++ Q AYR L+ + +
Sbjct: 492 DLVQKILPSVFLRRMKT-LIADQLPKKSDRVVFCQLTQTQADAYRTFLESDRCEFIRTAR 550
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C CGS + CC N+ D + PC+V Q+++NHL LI P D +KQ
Sbjct: 551 EECGCGSGRGRGYCCHV--NVPDEDEKWAAFIFPCMVTFQKLANHLALIVPLSTDSAEKQ 608
Query: 480 RKDA---ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
KD ELA D+ + N + S + CGK + L++L+ W S GDK+L
Sbjct: 609 AKDLKTLELACPDTYKDLFRIRDN-----ILVQSQREFCGKWKVLKRLLDFWHSNGDKVL 663
Query: 537 LFSYSVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
+FS+SVR+L +L G Y+FS LDGS R V DFN+ P++ +FLIST+AG
Sbjct: 664 IFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEERSQAVGDFNADPNQFLFLISTKAG 723
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLN+ SAN+VV+ DP+WNPA DLQAQDR++R GQ R+V VFRL+S+G++EE+VY RQ+
Sbjct: 724 GVGLNITSANKVVVMDPHWNPAYDLQAQDRAYRIGQTRNVEVFRLVSSGTIEEVVYARQI 783
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHE 710
YKQQ +NI + E+RYF+GV D +GE+FG+ NLF DNL +I+ +
Sbjct: 784 YKQQQANIGYNASEERRYFKGVMDESSKKGEIFGLENLFSFQEDNLLLRDIMHKTNVAES 843
Query: 711 EQGQQQERHHCTNQGFKGLETHIVSSKD---------------SNTLLSTGS-------K 748
+ G H F + I+S+K+ +++LLST S K
Sbjct: 844 KAGVNAYDFHVDESQFDSEDEDILSNKNLGIDDDANIAGIKKLADSLLSTSSVGSKPCRK 903
Query: 749 TRK-SSDPEMARTSKPLLEDMGIVYAHRNDDIVNK 782
TR+ SDP A +L G+ Y H N +++ +
Sbjct: 904 TRRGGSDPINA-----ILAKAGVEYTHENSEVIGR 933
>gi|225677983|gb|EEH16267.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1030
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/591 (40%), Positives = 354/591 (59%), Gaps = 16/591 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGK++Q IAFL A +GK
Sbjct: 225 YSLGLIPAPIAQWLRDYQVRGVEFLHELFVYQKGGILGDDMGLGKSVQVIAFLTAAYGKT 284
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ +KG LI+CP +++QNW+ E RW + V IYHG ++
Sbjct: 285 GDERDAKRMR--KMRRKGDGVWYPRTLIVCPGTLLQNWKSELDRWGWWLVEIYHGAGKEA 342
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+++T++ +Y ++ L+ V W+ V+ DE H +K KS+ + E+
Sbjct: 343 ALQSAASGRVEIMLTTYKTYVLNKGALNMVEWDCVVADECHIIKERKSETTQSMNEINAL 402
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 403 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICDPLKLGQSHDATTYQLSKAR 462
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 463 KTAKKLVNNLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIKYI 521
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
PCSCGS CC+ G V P + LQ++SNHL ++ P +D
Sbjct: 522 KMSSDPCSCGSGKKSGWCCRMYLPQGGKWQS---YVFPAISNLQKLSNHLAILIPQSQDP 578
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+KQ KD E+ PD A +S + ++ + CGK + L+KL+ W GDK+
Sbjct: 579 SEKQDKDLEMLQIAV-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLKWWHRNGDKV 636
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+FS+SVR+L +L+ Y+ S LDGS + R VD+FN+ P + VFLISTRAGG
Sbjct: 637 LVFSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLISTRAGG 696
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+Y
Sbjct: 697 IGLNITSANKVVVVDPNWNPAFDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIY 756
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
KQQ +NI + E+RYF+G+Q+ K+ +GE+FG+ N+F+ DN+ +I+
Sbjct: 757 KQQQANIGYTASTERRYFKGIQEKKDRRGEIFGLSNMFQYQGDNIVLRDIV 807
>gi|169595490|ref|XP_001791169.1| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15]
gi|160701103|gb|EAT91979.2| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15]
Length = 1093
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/588 (40%), Positives = 351/588 (59%), Gaps = 15/588 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES-SD 187
+PA I L ++Q GV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK + SD
Sbjct: 277 IPAPIAQWLRDYQVGGVQFLHERFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKKATKSD 336
Query: 188 STILKDNKVDKKGY----VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
+ ++ + + K +LI+CP +++QNWE E ++W + V YHG +R +L
Sbjct: 337 AKCMRAMRREGKDRWYPRILIVCPGTLMQNWEEELAKWGWWEVYRYHGNAADRKGVLGAA 396
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+E++IT++ +YR H S ++ ++W+ V+ DE H++K++ +++ A ++ RIGL
Sbjct: 397 AKGMLEIMITTYTTYRNHESEINTIDWDCVVADECHQIKSKNAEITKAMNKINALCRIGL 456
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QNK EL+NL +W PG+ G+ + +++ PLK GQ A + + R Q
Sbjct: 457 TGTAIQNKYEELWNLLNWARPGAYGSAQEWKQMISLPLKLGQAHDATNAQLADSRSRAQE 516
Query: 362 LV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
LV +L LRR K I H + K D ++FC +++ Q AYR L + Q +
Sbjct: 517 LVHKILPSVFLRRMKT-LIAHQLPKKSDRIIFCQLTNTQADAYREFLDSDKCQFIQTARE 575
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
C CGS + CC + + V PC+ L +++NHL LI P D P+K+
Sbjct: 576 DCDCGSGKKRGWCC--YVKVSEAEENWSNFVFPCMATLMKLANHLALIVPQSSDLPEKRS 633
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
KD EL + N +S + S + CGK + L +L+ W S GDK+L+FS+
Sbjct: 634 KDLELLELACPRQYRELYKN--RDSILKQSQREFCGKWKVLRRLLDFWHSNGDKVLIFSH 691
Query: 541 SVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
SVR+L +L G Y+FS LDGS R +V DFN+ P + VFLIST+AGG+GL
Sbjct: 692 SVRLLRLLRGLFDIDGTKYNFSYLDGSMKYEDRSKVVADFNADPDQFVFLISTKAGGVGL 751
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
N+ SAN+VVI DP+WNPA DLQAQDR++R GQ R V VFRL+S+G++EE+VY RQ+YKQQ
Sbjct: 752 NITSANKVVIVDPHWNPAYDLQAQDRAYRIGQTRDVEVFRLVSSGTIEEIVYARQIYKQQ 811
Query: 659 LSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+NI + E+RYF+GV D +GELFG+ NLF D++ +I+
Sbjct: 812 QANIGYNASEERRYFKGVMDQAGKKGELFGLENLFTFQEDSVLLRDIM 859
>gi|332832400|ref|XP_528720.3| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Pan troglodytes]
Length = 701
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/603 (40%), Positives = 359/603 (59%), Gaps = 23/603 (3%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS DG+ +P +IN L ++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSDDGD----SIPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 164 AVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+ +F++ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + N G L L L LQ+++NH+
Sbjct: 403 VLETEDVTLILQSSEPCTCRSGRKRRNCCYK-TNSHG--ETVKTLYLSYLTVLQKVANHV 459
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
L++ + ++ + VF D V +++ +F LSD K GKM+ L++L+
Sbjct: 460 ALLQAASTSK-QQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLL 517
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 518 NHCRINRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVN 577
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++
Sbjct: 578 ICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTV 637
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSE 704
EE++Y RQ+YKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T +
Sbjct: 638 EEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKD 697
Query: 705 IIE 707
I+E
Sbjct: 698 ILE 700
>gi|46137411|ref|XP_390397.1| hypothetical protein FG10221.1 [Gibberella zeae PH-1]
Length = 1023
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/615 (40%), Positives = 351/615 (57%), Gaps = 29/615 (4%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+F + +P KD E P +PASI L ++Q G FL++ + + GGILGDD
Sbjct: 140 KFPESSGIKPSRPYKDIELPQSAGLIPASIAQYLRDYQVAGASFLHRKFVYQEGGILGDD 199
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL FGK DE + + + + Y +LIICP S+I NW+ E
Sbjct: 200 MGLGKTVQVAAFLTVAFGKTGDERDAKRLRQVRQYPDRWYPRILIICPGSLIMNWKNELD 259
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++ ++HG N+D L A VE++IT++D+Y+ S ++ V W+ VI DE HRL
Sbjct: 260 RWGWWHTDLFHGANKDDALSTARAGRVEIMITTYDTYKNSRSAINLVQWDAVIADECHRL 319
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ RIGLTGT +QN+ EL+ L DW PG GT + + +PL
Sbjct: 320 KDRSSETTKALNEINALCRIGLTGTAIQNRYEELWTLLDWTNPGHFGTLPEWTQRVTKPL 379
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + +A LV +L +Y LRR K I + + K D VVFC ++D
Sbjct: 380 TVGQSHDATVAQLSLARTTADKLVHNLLPQYFLRRMKS-IIANQLPKKTDRVVFCPLTDF 438
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC-------KRLDNLDGCDSCPFCLV 451
Q+ AY L +I+ L PC CG + CC +R N+ V
Sbjct: 439 QRDAYENFLSSADIEILRTLSEPC-CGGK-KKGWCCNSLLPDGRRWQNI----------V 486
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
P ++ LQ+++NHL L+ P+ D K D + V N + L +
Sbjct: 487 FPSMMVLQKLANHLTLLVPHTTDLEAKHETDIKTLQTCLPDTWKYVYDN--RDRIKNLVN 544
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
+ CGK + L+KL+ W S GDK+L+FS+SVR+L IL Y+ S LDGS +R
Sbjct: 545 PEFCGKWKVLKKLLKFWHSNGDKVLVFSHSVRLLRILHHLFTNTSYTVSYLDGSLSYEVR 604
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q +VD FNS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ
Sbjct: 605 QEVVDTFNSDPTQFVFLISTKAGGVGLNITSANKVVIIDPHWNPSYDLQAQDRAYRIGQT 664
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN 691
R V VFRL+S G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ + +GE+FG+ N
Sbjct: 665 RDVEVFRLISLGTVEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDTDRKGEIFGLAN 724
Query: 692 LFRDLSDNLFTSEII 706
+F +D+ +I+
Sbjct: 725 IFLYHNDSGLLQDIV 739
>gi|449303837|gb|EMC99844.1| hypothetical protein BAUCODRAFT_30259 [Baudoinia compniacensis UAMH
10762]
Length = 1009
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/698 (38%), Positives = 389/698 (55%), Gaps = 54/698 (7%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D Y + VPA I L +Q +G +FL++L+ + GGILGDDMGLGKTIQ IAFL A F
Sbjct: 205 DLRYSLGIVPAPIAQYLRPYQIQGAEFLHELFVYQKGGILGDDMGLGKTIQVIAFLTAAF 264
Query: 181 GK--DESSDSTILKDNKV-DKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD 235
GK DE + K ++ D + Y VLII P ++ NW E RW ++ +HG ++
Sbjct: 265 GKTGDERDYKRMRKVRRMGDDRWYPRVLIIAPGGLMANWRAELDRWGWWHTYTFHGDKKE 324
Query: 236 MILEKLEA--CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
A +E++IT++ SYR H ++ + W+ VI DE H +K +S++ A E+
Sbjct: 325 KEAALAAAHHGRLEIMITTYASYRGHADKINAIRWDAVIADECHIIKEPRSEITKAMNEV 384
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR----LTAPE 349
RIG+TGT +QNK EL+ L +W PG+ G +++ PLK GQ L+
Sbjct: 385 NALCRIGMTGTAIQNKYEELWTLLNWTNPGTFGPLMTWKQSICLPLKIGQSHDATLSQLA 444
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
R R A + Q+L L ++ LRRTK I + K D VVFC +++ Q AY
Sbjct: 445 RARRTATKLVQNL---LPQFFLRRTKA-LIADQLPKKSDRVVFCPLTETQIGAYDNFCDS 500
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
++ + PC+CGS Q CC + G + V P +V LQ+++NH+ L+
Sbjct: 501 ELVRAIRESQEPCTCGSGKKQGWCC--YAEIYGYGNWQH-FVFPAMVTLQKLANHVALLI 557
Query: 470 P--NPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
P N DE R+ +L +A+ P I DL + ++ + ++ + CGK + L+KL+
Sbjct: 558 PSGNEHDEDKHDRELEKLETAL--PHIWKDLY---HKRDNIMNYANTEYCGKWKVLKKLL 612
Query: 526 YSWASKGDKILLFSYSVRMLDILEK-FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
W GDK+L+FS+SVR+L +L+ F Y+ S LDGS P RQ+ VD+FN+ S+
Sbjct: 613 RLWYENGDKVLVFSHSVRLLRMLDLLFKATTTYTVSYLDGSMPYADRQAEVDNFNADTSR 672
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLISTRAGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+S G+
Sbjct: 673 FVFLISTRAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQTRDVEVFRLVSQGT 732
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+EE+VY RQ+YKQQ +NI + +E+RYF+GVQD K +GE+FG+ NLF + +N+ E
Sbjct: 733 VEEIVYARQIYKQQQANIGYNASVERRYFKGVQDQKGMKGEIFGLANLFAPVKENVVLRE 792
Query: 705 IIESH---------EEQGQQQERHHCTNQGFKGL------ETHIVSSKDSNTLLSTGSKT 749
I+ E G + E G L E +S + + S GSK
Sbjct: 793 IVNKTNVAETRAGVEIAGLEFEASQDDGVGGSPLLDGETKEDAAISQLAAEIIDSAGSKR 852
Query: 750 R------KSSDPEMARTSKPLLEDMGIVYAHRNDDIVN 781
+ K DP A +L +G+ Y H N +++
Sbjct: 853 KAAKLIAKRKDPVSA-----ILASVGVEYTHENAEVIG 885
>gi|226287268|gb|EEH42781.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis
Pb18]
Length = 1025
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/591 (40%), Positives = 354/591 (59%), Gaps = 16/591 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGK++Q IAFL A +GK
Sbjct: 220 YSLGLIPAPIAQWLRDYQVRGVEFLHELFVYQKGGILGDDMGLGKSVQVIAFLTAAYGKT 279
Query: 184 -ESSDSTILKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM 236
+ D+ ++ K+ +KG LI+CP +++QNW+ E RW + V IYHG ++
Sbjct: 280 GDERDAKRMR--KMRRKGDGVWYPRTLIVCPGTLLQNWKSELDRWGWWLVEIYHGAGKEA 337
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L+ + VE+++T++ +Y ++ L+ V W+ V+ DE H +K KS+ + E+
Sbjct: 338 ALQSAASGRVEIMLTTYKTYVLNKGALNMVEWDCVVADECHIIKERKSETTQSMNEINAL 397
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A
Sbjct: 398 CRIGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICDPLKLGQSHDATTYQLSKAR 457
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 458 KTAKKLVNNLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIKYI 516
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
PCSCGS CC+ G V P + LQ++SNHL ++ P +D
Sbjct: 517 KMSSDPCSCGSGKKSGWCCRMYLPQGGKWQS---YVFPAISNLQKLSNHLAILIPQSQDP 573
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+KQ KD E+ PD A +S + ++ + CGK + L+KL+ W GDK+
Sbjct: 574 SEKQDKDLEMLQIAL-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLKWWHRNGDKV 631
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+FS++VR+L +L+ Y+ S LDGS + R VD+FN+ P + VFLISTRAGG
Sbjct: 632 LVFSHNVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLISTRAGG 691
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+Y
Sbjct: 692 IGLNITSANKVVVVDPNWNPAFDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIY 751
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
KQQ +NI + E+RYF+G+Q+ K+ +GE+FG+ N+F+ DN+ +I+
Sbjct: 752 KQQQANIGYTASTERRYFKGIQEKKDRRGEIFGLSNMFQYQGDNIVLRDIV 802
>gi|343426839|emb|CBQ70367.1| related to RAD26-DNA repair and recombination protein [Sporisorium
reilianum SRZ2]
Length = 1134
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/623 (41%), Positives = 359/623 (57%), Gaps = 46/623 (7%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PL+L+ P ++VPA+IN L +QR+GV+FLY+ Y G +LGDDMGLGKTIQ IA
Sbjct: 268 PLILA-----PSVEVPAAINRFLRSYQRDGVRFLYRSYAEGRGALLGDDMGLGKTIQVIA 322
Query: 175 FLAAVFGK---DESSDSTI--LKDNKVDKKGY---------VLIICPSSVIQNWEIEFSR 220
FL+A+ GK +E +D I ++ ++ + Y LIICPSSVI NW E
Sbjct: 323 FLSAIMGKTGREEDADRRIEAVRSDR-QRSDYHRADAIWPTCLIICPSSVIDNWRHELDT 381
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W F + Y G LE +++L+TS ++ + L +++ V++DEAH+LK
Sbjct: 382 WGYFEHAAYTGTRAKDALESFRRGRLDILVTSHETASLSIEHLRDLDLSCVLIDEAHKLK 441
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N S++ A + + R LTGT +QN ELY L DW PG LGT + + ++PLK
Sbjct: 442 NPSSQMTQAMQTFRCKARFALTGTAIQNTYRELYTLADWTNPGLLGTVKEWIAEIEDPLK 501
Query: 341 HGQRLTA-PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
HGQR A PER I A R + LV VL + LRRTK I + K D +VFC ++
Sbjct: 502 HGQRRGADPER-IADARTRAEKLVKNVLPIFFLRRTKA-LIADQLPRKFDKIVFCPLTST 559
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCG--SPLTQV-----ECCKRLDNLDGCDSCPFCLV 451
Q Y+R+L E+ + PC CG P T + CC + D + +
Sbjct: 560 QLDVYKRILSEDEVDLMKRHADPCDCGRLDPETGLAYRRQNCCFKRDRKGESWNKN---M 616
Query: 452 LPCLVKLQQISNHLELIKPNPRD----EPDK-QRKDAELASA--VFGPDIDLVGGNAQNE 504
L + LQ+ SNH+ L+ P+P D EPD+ +R D +L+ +F NA N
Sbjct: 617 LKYIYLLQKCSNHVALVFPDPEDASSKEPDRMERYDRQLSYVRLMFPDSWQGKRCNAAN- 675
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
G+ + + CGK + L L+ W + GDK+LLFS ++R+L +E FL R+G++F RLDG
Sbjct: 676 ---GM-EPEFCGKWKVLAGLLAQWHADGDKVLLFSTNLRLLQFIEFFLAREGHNFLRLDG 731
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP RQ LV+ FN S VFLIST AGG GLNL +ANRVV+FDP+WNP+ DLQA DR
Sbjct: 732 TTPQPRRQQLVNQFNRDSSIFVFLISTTAGGTGLNLTAANRVVVFDPHWNPSHDLQAMDR 791
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
++RFGQ R V V+RL+ AGSLEE++Y RQ+YKQQ I + E+RYFEGV + G
Sbjct: 792 AYRFGQSRDVYVYRLIEAGSLEEVIYGRQLYKQQQMEIGYNATKERRYFEGVAGDQGSLG 851
Query: 685 ELFGICNLFRDLSDNLFTSEIIE 707
ELFG NLF +L II+
Sbjct: 852 ELFGCKNLFTLHESSLAMKSIID 874
>gi|58219008|ref|NP_001010895.1| putative DNA repair and recombination protein RAD26-like [Homo
sapiens]
gi|74756405|sp|Q5T890.1|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein
RAD26-like
gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens]
Length = 712
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/640 (38%), Positives = 370/640 (57%), Gaps = 36/640 (5%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF + LS +G+ +P +IN L ++
Sbjct: 94 IFDDEDLEKPYFPNRKFPSSSVA------------FKLSDNGD----SIPYTINRYLRDY 137
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 138 QREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRS 197
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V++ HG +D L +++ E+
Sbjct: 198 MKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCEI 257
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 258 ALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQN 317
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LG+ +F++ + +P++HGQR TA +R + + Q L +
Sbjct: 318 NMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSG 377
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 378 WFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQ 436
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ CC + ++ L L L LQ+++NH+ L++ + ++ +
Sbjct: 437 KRRNCCYKTNSHGETVKT---LYLSYLTVLQKVANHVALLQAASTSK-QQETLIKRICDQ 492
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L
Sbjct: 493 VFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVL 551
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+
Sbjct: 552 QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVL 611
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKL 668
FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V +
Sbjct: 612 FDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSEN 671
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 672 AKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKDILE 711
>gi|350589423|ref|XP_003357745.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Sus scrofa]
Length = 713
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/639 (38%), Positives = 367/639 (57%), Gaps = 34/639 (5%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ FQ LS+DG +P +IN L ++Q
Sbjct: 95 IFDDEDLEKPYFPDREFPSSAVAFQ-----------LSEDGA----SIPYTINRYLRDYQ 139
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKDN 194
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV GK + + +L+
Sbjct: 140 REGAQFLYGHFIQGRGCILGDDMGLGKTVQVISFLAAVLGKKGTREDIENNMPEFLLRSM 199
Query: 195 KVDK-----KGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVL 249
K + K LI+ P SV+ NW E W F V+I HG +D L +++ E+
Sbjct: 200 KKEAPSSAAKKLFLIVAPLSVLYNWRDELDTWGYFRVTILHGNKKDNELIRVKQRKCEIA 259
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 260 LTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQNN 319
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL+ + DW PG LG+ HF++ + +P++HGQR TA +R + + Q L + +
Sbjct: 320 MKELWCVMDWAVPGLLGSEIHFKKHFSDPVEHGQRHTATKRELATGRKAMQRLAIKMSGW 379
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC C S
Sbjct: 380 FLRRTKI-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVSLILQSSEPCPCSSGQK 438
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
+ CC + ++ L L LQ+++NH+ L++ + ++ + V
Sbjct: 439 RRNCCYKTNSHGESVKT---LYFSYLAVLQKVANHVALLQAASTSK-QQETLIKRICDQV 494
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
F D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L+
Sbjct: 495 FSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQ 553
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIF 609
++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+F
Sbjct: 554 QYCMASGLDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLF 613
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE 669
DP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V +
Sbjct: 614 DPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQLYKQQLHCVVVGSENA 673
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRY E VQ K+ QGELFG+ NLF+ S + T +I+E
Sbjct: 674 KRYXEAVQGSKKHQGELFGVYNLFKLRSQGSCLTRDILE 712
>gi|61402625|gb|AAH91795.1| LOC553504 protein, partial [Danio rerio]
Length = 1069
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/607 (38%), Positives = 353/607 (58%), Gaps = 20/607 (3%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GP E +L+ ++VP +IN L ++QREG+KF+Y+ Y G ILGDDMGLGKT+
Sbjct: 36 GPSEAFLLAGSD----VKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTV 91
Query: 171 QTIAFLAAVFGKD------ESSDSTILKDNKVDKK--GYVLIICPSSVIQNWEIEFSRWS 222
Q I FLAAV K E++ L K ++ +I+ P SV+ NW+ E W
Sbjct: 92 QVIGFLAAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTWG 151
Query: 223 TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNE 282
F V + HG +D L +++ E+ +T++++ R+ + +NW VIVDEAH++KN
Sbjct: 152 HFRVVVVHGVRKDEELARVQRGRCEIALTTYETLRLCLDQFNSINWAAVIVDEAHKIKNH 211
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
KSK+ A +++ + RIGLTGTI+QN + EL+ + +W P LG+ F+ + +P++ G
Sbjct: 212 KSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSDPIEKG 271
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRA 402
Q+ T +R + + Q L L ++ LRRTK I + K+D VV+C+++D Q+
Sbjct: 272 QKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKS-LISDQLPKKDDRVVYCSLTDFQRTV 330
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVKLQQI 461
YR +L ++ ++ C C S + +CC +L+ D P L L L+++
Sbjct: 331 YRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLN----ADGVPVRHLYFSYLAILRKV 386
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
+NH+ L++ +++ + VF D + +F +SD GKM+ +
Sbjct: 387 ANHVALLQSKDGTSKKQEKYVTTICEQVFRKFPDFTE-RCKQAAFEAMSDPMYSGKMKVM 445
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+KL+ + +K DK+LLFS S ++LD+LE F + +G + RLDG+T S R +V +FNSS
Sbjct: 446 QKLLNHFIAKKDKVLLFSLSTKLLDVLESFCMAEGLEYHRLDGNTKSKDRVKIVKEFNSS 505
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
+ L+ST AGGLGLN + AN VV+FDP WNPA DLQA DR +R GQ R V VFRL+S
Sbjct: 506 RDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLIS 565
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NL 700
G++EE++Y RQVYKQQL + + + +RYFE VQ + GELFGI NLFR +D
Sbjct: 566 LGTVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQTDGTC 625
Query: 701 FTSEIIE 707
T I+E
Sbjct: 626 LTHRILE 632
>gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens]
Length = 700
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/603 (39%), Positives = 359/603 (59%), Gaps = 23/603 (3%)
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
LS +G+ +P +IN L ++QREG +FLY Y + G ILGDDMGLGKT+Q I+FLA
Sbjct: 108 LSDNGD----SIPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLA 163
Query: 178 AVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFN 225
AV K + + +L+ K + K LI+ P SV+ NW+ E W F
Sbjct: 164 AVLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFR 223
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
V++ HG +D L +++ E+ +T++++ R+ L+ + W VIVDEAHR+KN K++
Sbjct: 224 VTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 283
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ LK RIGLTGTI+QN + EL+ + DW PG LG+ +F++ + +P++HGQR
Sbjct: 284 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRH 343
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
TA +R + + Q L + + LRRTK I + KED +V+C+++D QK Y+
Sbjct: 344 TATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQT 402
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+L+ ++ ++ PC+C S + CC + ++ L L L LQ+++NH+
Sbjct: 403 VLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT---LYLSYLTVLQKVANHV 459
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
L++ + ++ + VF D V +++ +F LSD K GKM+ L++L+
Sbjct: 460 ALLQAASTSK-QQETLIKRICDQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLL 517
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 518 NHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVN 577
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++
Sbjct: 578 ICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTV 637
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSE 704
EE++Y RQ+YKQQL + V + KRYFE VQ KE QGELFGI NLF+ S + T +
Sbjct: 638 EEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKD 697
Query: 705 IIE 707
I+E
Sbjct: 698 ILE 700
>gi|408397026|gb|EKJ76177.1| hypothetical protein FPSE_03652 [Fusarium pseudograminearum CS3096]
Length = 1023
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/608 (40%), Positives = 351/608 (57%), Gaps = 15/608 (2%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQ--VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
+F + +P KD E P +PASI L ++Q G FL++ + + GGILGDD
Sbjct: 140 KFPESSGIKPSRPYKDIELPQSAGLIPASIAQYLRDYQVAGASFLHRKFVYQEGGILGDD 199
Query: 164 MGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFS 219
MGLGKT+Q AFL FGK DE + + + + Y +LIICP S+I NW+ E
Sbjct: 200 MGLGKTVQVAAFLTVAFGKTGDERDAKRLRQVRQYPDRWYPRILIICPGSLIMNWKNELD 259
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
RW ++ ++HG N++ L A VE++IT++D+Y+ S ++ V W+ VI DE HRL
Sbjct: 260 RWGWWHTDLFHGANKEDALSTARAGRVEIMITTYDTYKNSRSAINLVQWDAVIADECHRL 319
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
K+ S+ A E+ RIGLTGT +QN+ EL+ L DW PG GT + + +PL
Sbjct: 320 KDRSSETTKALNEINALCRIGLTGTAIQNRYEELWTLLDWTNPGHFGTLPEWTQRVTKPL 379
Query: 340 KHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
GQ A + +A LV +L +Y LRR K I + K D VVFC ++D
Sbjct: 380 TVGQSHDATVAQLSLARTTADKLVHNLLPQYFLRRMKS-IIAKQLPKKTDRVVFCPLTDF 438
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q+ AY L +I+ L PC CG + CC L + DG +V P ++ L
Sbjct: 439 QRDAYENFLSSADIETLRTLSEPC-CGGK-KKGWCCNSLLS-DGRRWQ--NIVFPSMMVL 493
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
Q+++NHL L+ P D K D + V N + L + + CGK
Sbjct: 494 QKLANHLTLLVPQTTDLEGKHETDIKTLQTCLPDTWKYVYDN--RDRIKNLVNPEFCGKW 551
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+KL+ W S GDK+L+FS+SVR+L IL+ Y+ S LDGS +RQ +VD F
Sbjct: 552 KVLKKLLKFWHSNGDKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEVRQEVVDTF 611
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P++ VFLIST+AGG+GLN+ SAN+VVI DP+WNP+ DLQAQDR++R GQ R V VFR
Sbjct: 612 NSDPTQFVFLISTKAGGVGLNITSANKVVIIDPHWNPSYDLQAQDRAYRIGQTRDVEVFR 671
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L+S G++EE+VY RQ+YKQQ +NI + E+RYF+GVQ + +GE+FG+ N+F +D
Sbjct: 672 LISLGTVEEIVYARQIYKQQQANIGYTASSERRYFKGVQQDTDRKGEIFGLANIFLYHND 731
Query: 699 NLFTSEII 706
+ +I+
Sbjct: 732 SGLLQDIV 739
>gi|170097135|ref|XP_001879787.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor
S238N-H82]
gi|164645190|gb|EDR09438.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor
S238N-H82]
Length = 1000
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 361/651 (55%), Gaps = 81/651 (12%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PL+L ++ ++VPA+IN L E+QR+GVKF ++ YK GG+LGDDMGL TIQ I+
Sbjct: 151 PLILDREES---VKVPAAINTYLREYQRDGVKFFWRQYKEGRGGLLGDDMGL--TIQVIS 205
Query: 175 FLAAVFGKDESSDS--------TILKDNKVDKK-----------GYVLIICPSSVIQNWE 215
FL+A+ K+ + L+D + KK LII PS+V+ NWE
Sbjct: 206 FLSAIMRKEGVRTDKHRRRKFVSKLQDGEAWKKRRQLPPANAKWPTCLIIAPSTVVHNWE 265
Query: 216 IEFSRWSTFNVSIYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
EF W F V +Y+G R+ +L + ++V++T+FD R ++L ++ + VIV
Sbjct: 266 REFETWGYFEVGMYNGNTKEREPVLHDFKLGRLDVVLTTFDLARRDIALLEDLPFSCVIV 325
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE HR+KNE +K+ +A + R GLTGT +QN E++ + DW PG LGT ++
Sbjct: 326 DEVHRVKNEAAKITVAFHQFNCPRRFGLTGTTIQNSYKEMWTILDWTNPGRLGTSRQWQG 385
Query: 334 FYDEPLKHGQRLTAPE------------------------RFIRIADE--RKQHL----- 362
F +PL GQ A E R++R DE R+ ++
Sbjct: 386 FVVKPLTAGQSAGAAEEERAKALVVALVLRDKLLPRFFLRRYLRARDECLRRANVFKGRK 445
Query: 363 VAVLRKYLLRRTKEETI----GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ K++LRR T+ + + K D VVFC ++ Q AY+ +L + ++ L +K
Sbjct: 446 TSSSTKFVLRRIPLITLLFKLFYQLPEKTDQVVFCPLTSRQVAAYKHILNMAPVRNLTHK 505
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL--VLPCLVKLQQISNHLELIKPNPRDEP 476
D PC+CGS + CC PF V + L ++SNHL LI P P+D P
Sbjct: 506 DEPCTCGSRKARKACCH-----------PFVAGDVFKFMSILIKLSNHLGLILPGPKDTP 554
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
++ ++ LA F P+ D+ + + + CGK LE L+ W + +K+L
Sbjct: 555 EQTARNRALAEIAF-PEGDI------PKYGTAMMQTQYCGKWAVLEILLKEWRKETNKVL 607
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
+F+ SV++L++LE L KGY F +LDGST + R ++D F++ P +FLIST AGG
Sbjct: 608 IFTKSVKLLEMLEFHLNNKGYGFLKLDGSTKQSDRMPMIDRFHNDPEVFIFLISTLAGGT 667
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL AN+VVIFDPNWNPA DLQA DR+FRFGQ R V V+RLL AGS+EEL+Y RQ+YK
Sbjct: 668 GLNLTGANKVVIFDPNWNPAHDLQAMDRAFRFGQTRDVSVYRLLGAGSVEELIYARQIYK 727
Query: 657 QQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE 707
QQ I ++ RYFEG+Q +GELFGI N+F+ D L T IE
Sbjct: 728 QQQMAIGYEASVQTRYFEGIQGDTAKRGELFGIENIFKLHEDKLATKMAIE 778
>gi|358390225|gb|EHK39631.1| hypothetical protein TRIATDRAFT_231716 [Trichoderma atroviride IMI
206040]
Length = 1058
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/683 (37%), Positives = 372/683 (54%), Gaps = 44/683 (6%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PASI L ++Q +GV+FL+K + + GGILGDDMGLGKT+Q AFL FGK DE
Sbjct: 163 IPASIAQYLRDYQVDGVRFLHKKFVYQEGGILGDDMGLGKTVQVAAFLTTAFGKTGDERD 222
Query: 187 DSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEAC 244
+ + + Y +LIICP S+I NW E +RW ++V ++HG N+D +L A
Sbjct: 223 GKRLRQMRLFGDRWYPKILIICPGSLIMNWRNELNRWGWWHVDVFHGANKDDVLGAARAG 282
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+E++IT++++Y+ S ++ V W+ +I DE HRLK+ S+ A E+ RIGLTGT
Sbjct: 283 MLEIMITTYETYKNSRSSINMVQWDAIIADECHRLKDRYSETTKALQEVNALCRIGLTGT 342
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN+ EL+ L DW PG G + + +PL GQ A + +A + + LV
Sbjct: 343 AIQNRYEELWTLLDWTNPGHFGAKAEWSNAITKPLTVGQSHEATVAQLSLARQTAKKLVQ 402
Query: 365 -VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
+L +Y LRR K I + K D VVFC ++DLQ AY L E+ + C
Sbjct: 403 NLLPRYFLRRMKS-LIADQLPKKTDRVVFCPLTDLQLEAYENFLGSAEVATIRTASEDCD 461
Query: 424 CGSPLTQVECC-KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
C + CC + L N S V P ++ LQ+++NHL L+ P D +K + +
Sbjct: 462 CEHRGKKGWCCYQYLPNGRRWQSA----VFPSIIVLQKLANHLTLLVPLTTDLEEKHKSE 517
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
PD V + + L + + CGK + L+KL+ W G+K+L+FS+SV
Sbjct: 518 LRTLQTCM-PDTWSVL-YEKRDRISNLVNPEFCGKWKILKKLLKFWHGGGNKVLVFSHSV 575
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVS 602
R+L IL+ Y+ S LDGS RQ +VD FNS P++ VFLIST+AGG+GLN+ S
Sbjct: 576 RLLRILQHLFTSTSYTVSYLDGSLSYEARQDVVDTFNSDPTQFVFLISTKAGGVGLNITS 635
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
AN+VVI DP+WNPA DLQAQDR++R GQ R V VFRL+S G++EE+VY RQ+YKQQ +NI
Sbjct: 636 ANKVVIIDPHWNPAYDLQAQDRAYRIGQTRDVEVFRLISVGTIEEIVYARQIYKQQQANI 695
Query: 663 AVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI----------------- 705
+ E+RYF GVQ E +GE+FG+ N+F SD +I
Sbjct: 696 GYTASSERRYFRGVQQDTERKGEIFGLKNIFTHHSDMGLLRDIVNKTNIAEAKAGVHLVD 755
Query: 706 --IESHEEQGQ------QQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEM 757
IE + G+ ++E + G L +++S D + R SD
Sbjct: 756 VNIEEAAKDGEDLGVVKREEDGDSEDGGLSQL-AEMLTSSDKQKATDSKKVNRPKSDAVQ 814
Query: 758 ARTSKPLLEDMGIVYAHRNDDIV 780
A +L G+ Y H N +++
Sbjct: 815 A-----ILAAAGVEYTHDNSEVI 832
>gi|295663903|ref|XP_002792504.1| DNA excision repair protein (Rad26L) [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279174|gb|EEH34740.1| DNA excision repair protein (Rad26L) [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1029
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/589 (40%), Positives = 350/589 (59%), Gaps = 12/589 (2%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q GV+FL++L+ + GGILGDDMGLGK++Q IAFL A +GK
Sbjct: 224 YSLGLIPAPIAQWLRDYQVRGVEFLHELFVYQKGGILGDDMGLGKSVQVIAFLTAAYGKT 283
Query: 183 -DESSDSTILKDNKV-DKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + D Y LI+CP +++QNW+ E RW ++V +YHG ++ L
Sbjct: 284 GDERDAKRMRKMRRTGDGVWYPRTLIVCPGTLLQNWKSELDRWGWWHVEVYHGAGKEAAL 343
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + VE+++T++ +Y ++ L+ V W+ V+ DE H +K KS+ + E+ R
Sbjct: 344 QSAASGRVEIMLTTYKTYVLNKGALNMVEWDCVVADECHIIKERKSETAQSMNEINALCR 403
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A +
Sbjct: 404 IGLTGTAIQNKYEELWTLLNWTNPGKFGPVSTWKSTICDPLKLGQSHDATMYQLSKARKT 463
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L +L + LRR K I + K D VVFC ++ Q AY R+L I+ +
Sbjct: 464 AKKLANNLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIKYIKM 522
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
PCSCGS CC+ G V P + LQ++SNHL ++ P +D +
Sbjct: 523 SSDPCSCGSRKKSGWCCRMYLPQGGKWQS---YVFPAISNLQKLSNHLAILIPQSQDPSE 579
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
KQ KD E+ PD A +S + ++ + CGK + L+KL+ W GDK+L+
Sbjct: 580 KQDKDLEMLQIAV-PD-QWRQLYATRDSILNYANHEFCGKWKVLKKLLKWWHGNGDKVLV 637
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS+SVR+L +L+ Y+ S LDGS + R VD+FN+ P + VFLISTRAGG+G
Sbjct: 638 FSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFLISTRAGGIG 697
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQ
Sbjct: 698 LNITSANKVVVVDPNWNPAFDLQAQDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIYKQ 757
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
Q +NI + E+RYF+G+Q+ K +GE+FG+ N+F+ DN+ +I+
Sbjct: 758 QQANIGYTASTERRYFKGIQEKKGRRGEIFGLSNMFQYQGDNIVLRDIV 806
>gi|432873723|ref|XP_004072358.1| PREDICTED: uncharacterized protein LOC101165812 [Oryzias latipes]
Length = 1476
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/577 (39%), Positives = 343/577 (59%), Gaps = 15/577 (2%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK----- 182
+VP +IN L ++QREG+KF+YK Y G ILGDDMGLGKT+Q I FLAAV K
Sbjct: 127 RVPFTINRYLRDYQREGIKFIYKNYIRSSGCILGDDMGLGKTVQVIGFLAAVLHKTGTWE 186
Query: 183 DESSDSTILKDNKVDKK-----GYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMI 237
D ++ + +++ K L++ P SV+ NW+ E W F+ + HG ++
Sbjct: 187 DVENNRPLFLQSQIPSKESNSNKVFLVVAPLSVLYNWKDELDTWGYFHCVVVHGLRKEEE 246
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
L ++ +E+ +T++++ R+ + +NW V VDEAH++KN S++ A L+ +
Sbjct: 247 LTRISNGRIEIALTTYETLRLCLDQFNMINWSAVFVDEAHKIKNPNSQITQAMKGLRCKV 306
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
RIGLTGTI+QN + EL+ + DW PG LG HF+ + +P++ GQR +A +R + +
Sbjct: 307 RIGLTGTILQNNLEELWCVMDWAVPGCLGNLGHFKNKFSDPVEQGQRHSATKRALATGRK 366
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV + + LRRTK I + K+D VV+C+++D Q+ Y+ +L ++ L+
Sbjct: 367 TVRALVKKISPWFLRRTKA-LIEEQLPKKDDRVVYCSLTDFQQAVYQAVLDTEDVTLLLR 425
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
C C S T+ CC + N +G L L L++++NH L++ P
Sbjct: 426 SSDKCECQSGRTRRSCCYK-KNSEGAQIKE--LYFSYLAILRKVANHAALLQFTPGTSKK 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+++ + + + VF D V +NE+F LSD GKM+ L+KL+ + K K+L+
Sbjct: 483 QEKYVSSICAKVFPNFPDFVQ-RCRNEAFEALSDPTYSGKMKVLQKLLKYYLQKRSKMLI 541
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS S ++LD+LE + + +G +SRLDG+T S R +V DFNSS + L+ST AGGLG
Sbjct: 542 FSLSTKLLDVLESYCMAEGLDYSRLDGTTKSKDRVQIVKDFNSSSHVNLCLVSTMAGGLG 601
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQ
Sbjct: 602 LNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVLRLISLGTVEEIIYLRQVYKQ 661
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
QL V + +RYFE VQ ++GELFGI NLFR
Sbjct: 662 QLQCSVVGEQSARRYFEAVQGHGVYKGELFGIKNLFR 698
>gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio]
Length = 1269
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/612 (38%), Positives = 355/612 (58%), Gaps = 30/612 (4%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GP E +L+ ++VP +IN L ++QREG+KF+Y+ Y G ILGDDMGLGKT+
Sbjct: 38 GPSEAFLLAGSD----VKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTV 93
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVL-------------IICPSSVIQNWEIE 217
Q I FLAAV K + KD + ++ ++L I+ P SV+ NW+ E
Sbjct: 94 QVIGFLAAVLQK-----TGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDE 148
Query: 218 FSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
W F V + HG +D L +++ E+ +T++++ R+ + +NW VIVDEAH
Sbjct: 149 LDTWGHFRVVVVHGVRKDEELARVQRGRCEIALTTYETLRLCLDQFNSINWAAVIVDEAH 208
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
++KN KSK+ A +++ + RIGLTGTI+QN + EL+ + +W P LG+ F+ + +
Sbjct: 209 KIKNHKSKITQAVKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSD 268
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
P++ GQ+ T +R + + Q L L ++ LRRTK I + K+D VV+C+++D
Sbjct: 269 PIEKGQKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKS-LISDQLPKKDDRVVYCSLTD 327
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLV 456
Q+ YR +L ++ ++ C C S + +CC +L N DG P L L
Sbjct: 328 FQRTVYRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKL-NADGV---PVRHLYFSYLA 383
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
L++++NH+ L++ +++ + VF D + +F +SD G
Sbjct: 384 ILRKVANHVALLQSKDGTSKKQEKYVTTICEQVFRKFPDFTE-RCKQAAFEAMSDPMYSG 442
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
KM+ ++KL+ + +K DK+LLFS S ++LD+LE + + +G + RLDG+T S R +V
Sbjct: 443 KMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAEGLEYHRLDGNTKSKDRVKIVK 502
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
+FNSS + L+ST AGGLGLN + AN VV+FDP WNPA DLQA DR +R GQ R V V
Sbjct: 503 EFNSSRDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTV 562
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
FRL+S G++EE++Y RQVYKQQL + + + +RYFE VQ + GELFGI NLFR
Sbjct: 563 FRLISLGTVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQ 622
Query: 697 SD-NLFTSEIIE 707
+D T I+E
Sbjct: 623 TDGTCLTHRILE 634
>gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio]
Length = 1105
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/607 (38%), Positives = 353/607 (58%), Gaps = 20/607 (3%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
GP E +L+ ++VP +IN L ++QREG+KF+Y+ Y G ILGDDMGLGKT+
Sbjct: 36 GPSEAFLLAGSD----VKVPYTINRYLRDYQREGIKFIYQNYAKSRGCILGDDMGLGKTV 91
Query: 171 QTIAFLAAVFGKD------ESSDSTILKDNKVDKK--GYVLIICPSSVIQNWEIEFSRWS 222
Q I FLAAV K E++ L K ++ +I+ P SV+ NW+ E W
Sbjct: 92 QVIGFLAAVLQKTGTWKDVENNRPQFLLSQKPSERVQKVFVIVAPLSVLYNWKDELDTWG 151
Query: 223 TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNE 282
F V + HG +D L +++ E+ +T++++ R+ + +NW VIVDEAH++KN
Sbjct: 152 HFRVVVVHGVRKDEELARVQRGRCEIALTTYETLRLCLDQFNSINWAAVIVDEAHKIKNH 211
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
KSK+ A +++ + RIGLTGTI+QN + EL+ + +W P LG+ F+ + +P++ G
Sbjct: 212 KSKITQAMKQMRCKVRIGLTGTILQNNLEELWCVMNWAVPRCLGSLGAFKNRFSDPIEKG 271
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRA 402
Q+ T +R + + Q L L ++ LRRTK I + K+D VV+C+++D Q+
Sbjct: 272 QKHTVTKRALAEGRKAVQELAKKLSRWFLRRTKS-LISDQLPKKDDRVVYCSLTDFQRTV 330
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF-CLVLPCLVKLQQI 461
YR +L ++ ++ C C S + +CC +L+ D P L L L+++
Sbjct: 331 YRAVLDSDDVTLMLQSSGKCPCSSGRPRKKCCYKLN----ADGVPVRHLYFSYLAILRKV 386
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
+NH+ L++ +++ + VF D + +F +SD GKM+ +
Sbjct: 387 ANHVALLQSKDGTSKKQEKYVTTICEQVFRKFPDFTE-RCKQAAFEAMSDPMYSGKMKVM 445
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+KL+ + +K DK+LLFS S ++LD+LE + + +G + RLDG+T S R +V +FNSS
Sbjct: 446 QKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAEGLEYHRLDGNTKSKDRVKIVKEFNSS 505
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
+ L+ST AGGLGLN + AN VV+FDP WNPA DLQA DR +R GQ R V VFRL+S
Sbjct: 506 RDVNLCLVSTLAGGLGLNFIGANVVVLFDPTWNPANDLQAIDRVYRIGQCRDVTVFRLIS 565
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NL 700
G++EE++Y RQVYKQQL + + + +RYFE VQ + GELFGI NLFR +D
Sbjct: 566 LGTVEEIIYLRQVYKQQLQSSVIGQENARRYFEAVQGTDGYAGELFGIRNLFRLQTDGTC 625
Query: 701 FTSEIIE 707
T I+E
Sbjct: 626 LTHRILE 632
>gi|390596434|gb|EIN05836.1| hypothetical protein PUNSTDRAFT_145742 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 962
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/708 (37%), Positives = 368/708 (51%), Gaps = 76/708 (10%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PLVL I VP IN L ++QREG++FL+ Y G +LGDDMGLGKT+Q I+
Sbjct: 223 PLVLDAKRH---ISVPRYINTFLRDYQREGIRFLWTQYSQGLGALLGDDMGLGKTVQIIS 279
Query: 175 FLAAVFGKDESSDSTILKDNKVD-------------------KKGYVLIICPSSVIQNWE 215
FL+A+ K + V K LII PS+V+ NWE
Sbjct: 280 FLSAIMRKSGDIRDLDRRRRYVSHLQDSEDWQKRKKLPPANVKWPTCLIIAPSTVVYNWE 339
Query: 216 IEFSRWSTFNVSIYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
EF W F V +Y G +R +L + ++V+ITSFD R S+L ++ W +VIV
Sbjct: 340 REFETWGFFEVGVYTGKPSDRKDVLRDFKMGRLDVVITSFDLARQDISLLDDLAWSVVIV 399
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H LKN +SK A + K + RIGLTGT +QN EL+ + DW PG +GT ++
Sbjct: 400 DEVHTLKNPRSKTAHAYNQFKCQQRIGLTGTAIQNNYGELHTILDWTNPGRVGTPAQWQF 459
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+ PL GQ E +ER + +L R+T + + K D VVFC
Sbjct: 460 YVTGPLTRGQSKACSE------EERAR------ANHLERQTASKIFQAQLPKKIDKVVFC 507
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ Q Y+R+L +P +Q ++ KD C CGS + +CCK D ++
Sbjct: 508 PLTRKQILVYKRILAVPAVQDMLMKDDLCECGSRAKRKDCCKPWDK---------KILFQ 558
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
+ L + SNHL L+ P P D ++ + A FGP G + F
Sbjct: 559 YMSALLKASNHLSLLLPGPGDTAEQATRVA------FGPSPPTYGESMFVPDF------- 605
Query: 514 SCGKMRALEKLMYSWASKGD-KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
CGK LE L+ W K+L+F+ SV++L+IL+ L R+ F RLDGSTP + R
Sbjct: 606 -CGKWLILESLLAEWREDPTIKVLIFTKSVKLLEILDYHLGRQHSQFVRLDGSTPQHDRM 664
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
L+D FN+ P ++FLIST AGG GLNL +AN+VVIFDPNWNPA DLQA DR++RFGQ R
Sbjct: 665 PLIDRFNNDPEIRIFLISTLAGGTGLNLTAANKVVIFDPNWNPAHDLQAMDRAYRFGQTR 724
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNL 692
V V+RLL AGSLEEL+Y RQ+YKQQ I ++ RYFEG+Q +GELFGI N+
Sbjct: 725 DVYVYRLLGAGSLEELIYARQLYKQQQMRIGYEASIQTRYFEGIQGDPTRKGELFGIKNI 784
Query: 693 FRDLSDNLFTSEIIE-----------SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNT 741
F D L T + IE +H E ++ + + +G + +
Sbjct: 785 FTLHEDTLATKKAIEDAHLSSFDWALAHAEAKKRGKDAWVYDAEKEGTKQEPEMNGLGAL 844
Query: 742 LLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRK 789
L K R++ + ++ L+ GI YAH N+D++ P Q++
Sbjct: 845 LFDDSVKAREAHE-----VTEKALKAAGIQYAHANEDLLKTNPFEQQR 887
>gi|348517334|ref|XP_003446189.1| PREDICTED: hypothetical protein LOC100700470 [Oreochromis
niloticus]
Length = 1506
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/590 (39%), Positives = 348/590 (58%), Gaps = 20/590 (3%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
PL LS E +VP +IN L ++QREG++F+Y Y G ILGDDMGLGKT+Q I
Sbjct: 86 PLELSDAHED---RVPYTINRYLRDYQREGIRFIYNNYIRSRGCILGDDMGLGKTVQVIG 142
Query: 175 FLAAVFGKDESSDSTILKDNK----------VDKKGYVLIICPSSVIQNWEIEFSRWSTF 224
FLAAV K + + + +N+ + LI+ P SV+ NW+ E W F
Sbjct: 143 FLAAVLHKTGTWED--IANNRPQFLQSQQSSKQMQQVFLIVAPLSVLYNWKDELDTWGHF 200
Query: 225 NVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKS 284
+ HG ++ L ++ VE+ +T++++ R+ ++++W V+VDEAH++KN S
Sbjct: 201 QCVVVHGLRKEEELARIRKGRVEIALTTYETLRLCLDQFNKIDWSAVVVDEAHKIKNPDS 260
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
++ A EL+ + RIGLTGTI+QN + EL+ + DW PG L + HF+ + +P++ GQR
Sbjct: 261 QITQAMKELRCKVRIGLTGTILQNNLEELWCVLDWAIPGCLDSLGHFKNKFSDPIEQGQR 320
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
+A +R + + + LV + + RRTK I + K+D VV+C+M++ Q+ Y+
Sbjct: 321 HSATKRALATGRKAVRALVRKISHWFFRRTKA-IIKEQLPKKDDRVVYCSMTEFQQTVYQ 379
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
+L ++ L+ C C S T+ CC + N DG L L L++++NH
Sbjct: 380 AVLDSEDVTLLLRSSEKCDCHSRRTRRSCCYKT-NTDGVHMKE--LYFSYLAILRKVANH 436
Query: 465 LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
+ L++ P +++ + + + VF + V +NE+F LSD GKM+ L+KL
Sbjct: 437 VALLQSTPGTSKKQEKYVSAVCAKVFQKFPEFVH-RCKNEAFEALSDPMYSGKMKVLQKL 495
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ + K DK+L+FS S ++LD+LE + + G FSRLDGST S R +V DFNSS
Sbjct: 496 LKFYLQKRDKVLIFSLSTKLLDVLESYCMAVGLDFSRLDGSTKSKERVQIVRDFNSSSHI 555
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G+
Sbjct: 556 NLCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVTVLRLISLGT 615
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
+EE++Y RQ+YKQQL + V + +RYFE V+ + + ELFGI NLFR
Sbjct: 616 VEEVIYLRQIYKQQLHSSVVGKESSRRYFEAVRGHGDHKDELFGIKNLFR 665
>gi|398408778|ref|XP_003855854.1| SNF2 family DNA-dependent ATPase domain-containing protein, partial
[Zymoseptoria tritici IPO323]
gi|339475739|gb|EGP90830.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 911
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/584 (40%), Positives = 344/584 (58%), Gaps = 13/584 (2%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESS 186
+PA I L +Q EG +L++ + + G +LGDDMGLGKTIQ I+FL A FGK DE
Sbjct: 140 IPAPIAQYLKPYQVEGTAWLHEKFVFQKGCLLGDDMGLGKTIQVISFLTAAFGKTGDERD 199
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
D + K + + VLIICP ++ NW+ E RW + +YH +++ L E
Sbjct: 200 DRRMRKWRREKGDEWYPRVLIICPGGLMHNWQSELDRWGWWKTYLYHDADKEAALAAAEN 259
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+E++IT++++YR++ S ++ + W+ VI DE H +K +K+++ A + RIGL+G
Sbjct: 260 GRLEIMITTYNTYRLNESAINNIRWDCVIADECHIIKEKKAEITKAMANVNALCRIGLSG 319
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QNK EL+ L +W PG +G +++ PLK GQ A + A LV
Sbjct: 320 TAIQNKYEELWTLLNWANPGCVGPISSWKQSICVPLKTGQSHDATVMQLSKARRIATKLV 379
Query: 364 A-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+L + LRRTK I + K D VVFC ++ Q AY + + + PC
Sbjct: 380 TNLLPNFFLRRTKA-LIADQLPKKSDRVVFCPLTKTQADAYNNFCDSEIVHAIRDYAEPC 438
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
CGS Q CC+ +DG F V L +++++NH+ L+ P EP+K K+
Sbjct: 439 YCGSGKKQGSCCRV--EVDGVRWQTF--VFSALDTVKKLANHIALLVPTGVIEPEKHAKE 494
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
PD+ A ES + SD + CGK + L++L+ W + GDK+L+FS+SV
Sbjct: 495 LHRLQLAL-PDM-WQKLYAARESMLMHSDEEFCGKWKVLKRLLNLWHNSGDKVLIFSHSV 552
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVS 602
R+L IL GY FS LDGS + RQ VD++NS PS+ VFLIST+AGG+GLN+ S
Sbjct: 553 RLLKILHLLFQTTGYKFSYLDGSMSYHDRQLTVDNYNSDPSQFVFLISTKAGGVGLNITS 612
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
AN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI
Sbjct: 613 ANKVVVVDPNWNPSYDLQAQDRAYRIGQVRDVEVFRLISAGTVEEIVYARQIYKQQQANI 672
Query: 663 AVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+ +E+RYF GVQD K +GE+FG+ N+F SDN+ I+
Sbjct: 673 GYNASVERRYFSGVQDDKLHKGEIFGLTNIFAPQSDNVVLRNIV 716
>gi|336472167|gb|EGO60327.1| hypothetical protein NEUTE1DRAFT_75276 [Neurospora tetrasperma FGSC
2508]
gi|350294615|gb|EGZ75700.1| hypothetical protein NEUTE2DRAFT_156107 [Neurospora tetrasperma
FGSC 2509]
Length = 1139
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/729 (35%), Positives = 385/729 (52%), Gaps = 93/729 (12%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEH 140
F D+EK + EQ +F+ + +P KD E Y +PA I L ++
Sbjct: 156 FSDDEKGTKYEQRP---------KFEESSGIKPCRPYKDVELEYSAGTIPACIAQYLRDY 206
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDK 198
Q EGVKFL++ + + G ILGDDMGLGKT+Q AFL A FGK DE + K +
Sbjct: 207 QVEGVKFLHQKFVYQRGCILGDDMGLGKTVQVAAFLTAAFGKTGDERDAKRMRKMRRAGD 266
Query: 199 KGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSY 256
Y V+I+CP S+IQNW+ E RW ++V +YHG NR+ +L+ ++ +EV+IT++D+Y
Sbjct: 267 LWYPRVIIVCPGSLIQNWKNELDRWGWWHVDVYHGSNREDVLQAAKSGRIEVMITTYDTY 326
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
R ++ + W+ V+ DE H LKN S+ A ++ RIGLTGT +QN+ EL+ L
Sbjct: 327 RNCHEAVNTIEWDCVVADECHILKNTVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTL 386
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTK 375
+W PG GTR + E +PL GQ A + + IA + LV +L ++ LRR K
Sbjct: 387 LNWTNPGYFGTRAEWNESITKPLTAGQSHDATLKQLSIARTTAKKLVQNLLPEFFLRRMK 446
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
I H + K D VVFC ++D+Q+ AY L+ + ++N PC+C S CC
Sbjct: 447 -SLIAHQLPKKSDKVVFCPLTDVQRDAYENFLEGEHVTFILNAYQPCNCHSGRAGGFCCH 505
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
+ + DG + V P ++ LQ+I+NHL L+ P+ D +KQR + +
Sbjct: 506 KTLS-DGRTWKSY--VFPSIITLQKIANHLTLLIPSSSDPKEKQRSELNVLQTCAPNTWK 562
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
+ N ES + L++ + CGK + L KL+ W GDK+L+FS+S
Sbjct: 563 ELYNN--RESMLSLANPEFCGKWKILRKLLRFWHENGDKVLVFSHSF------------- 607
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
VFLIST+AGG+GLN+ SAN+VVIFDP+WNP
Sbjct: 608 ------------------------------VFLISTKAGGVGLNITSANKVVIFDPHWNP 637
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+G
Sbjct: 638 SYDLQAQDRAYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKG 697
Query: 676 VQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI-- 733
VQ K +GELFG+ NLF +D + +I+ + E N +E +
Sbjct: 698 VQRDKNRKGELFGLENLFTFHADQVVLRDIV----NKTNIAEAKAGVNLTDIDMEKAVKD 753
Query: 734 -----------VSSKDSNTLLSTGSKTRKSSDP----EMARTSKP-------LLEDMGIV 771
KD +T +S+ +K + DP E +++ KP +L G+
Sbjct: 754 EDDKLNVIKKESEDKDDDTGMSSLAKLVTAEDPDKLLEASKSKKPKSDAIAAILASAGVE 813
Query: 772 YAHRNDDIV 780
Y H N +++
Sbjct: 814 YTHENSEVI 822
>gi|432134242|ref|NP_001076075.2| DNA excision repair protein ERCC-6-like 2 [Bos taurus]
Length = 1558
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/605 (39%), Positives = 354/605 (58%), Gaps = 22/605 (3%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
P LS++G+ +P +IN L ++QREG +FLY + G ILGDDMGLGKT+Q I+
Sbjct: 117 PFQLSENGD----SIPYTINRYLRDYQREGAQFLYGHFIQGRGCILGDDMGLGKTVQVIS 172
Query: 175 FLAAVFGKDESSDST-------ILKDNKVD----KKGYVLIICPSSVIQNWEIEFSRWST 223
FLAAV GK + + +L++ K D K LI+ P SV+ NW+ E W
Sbjct: 173 FLAAVLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTWGY 232
Query: 224 FNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEK 283
F V+I HG +D L +++ E+ +T++++ R+ L+ + W VIV E+HR+KN K
Sbjct: 233 FRVTILHGNKKDSELIRVKQRKCEIALTTYETLRLCLDELNSLEWSDVIVYESHRIKNPK 292
Query: 284 SKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQ 343
++L L+ RIGLTGTI+QN + EL+ + DW P L HF++ + +P++HGQ
Sbjct: 293 ARLTEIMKALRCNVRIGLTGTILQNNMKELWCVMDWAVPRLLRIMIHFKKQFSDPVEHGQ 352
Query: 344 RLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY 403
R TA +R + + Q L + + LRRTK I + KED +V+C ++D QK Y
Sbjct: 353 RHTATKRELATGRKAMQRLARKMSGWFLRRTKT-LIKDQLPKKEDRMVYCALTDFQKAVY 411
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
+ +LQ ++ ++ PC+C S + CC + N G L + LQ+++N
Sbjct: 412 QTVLQTEDVSLILQSSEPCTCNSGHKRRNCCYKT-NSQG--ETVKTLYFSYIAVLQKVAN 468
Query: 464 HLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
H+ L++ ++ + VF D V +++ +F LSD K KM+ L++
Sbjct: 469 HVALVQTVSTSR-QQETLIKRICDQVFSRFPDFVQ-KSKDAAFGTLSDSKYSVKMKVLQQ 526
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+
Sbjct: 527 LLDHCRKNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERIKIVKEFNSTQD 586
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V V RL+S G
Sbjct: 587 VNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLG 646
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFT 702
++EE++Y RQVYKQQL + V + KRYFE VQ KE QGELFG+ NLF+ S + T
Sbjct: 647 TVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELFGVYNLFKLRSQGSCLT 706
Query: 703 SEIIE 707
+I+E
Sbjct: 707 RDILE 711
>gi|395326860|gb|EJF59265.1| hypothetical protein DICSQDRAFT_109083 [Dichomitus squalens
LYAD-421 SS1]
Length = 755
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/663 (37%), Positives = 360/663 (54%), Gaps = 58/663 (8%)
Query: 157 GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDK------------------ 198
GG+LGDDMGLGKTIQ I+FL+A+ K + + N V K
Sbjct: 5 GGLLGDDMGLGKTIQVISFLSAIMQKRGETLDIDRRRNHVSKLQDSSDWKKRRKLPAANA 64
Query: 199 -KGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEACGVEVLITSFDS 255
LII PSSV+ NWE EF W F + +Y GP R L + ++VL+TSFD
Sbjct: 65 TWPTCLIIAPSSVVGNWEREFKTWGYFEIGMYIGPPAARAEALNDFKLGRLDVLVTSFDV 124
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
R+ ++ E+ W + +DE HR+KN +SKL A + R GL+GT++QN EL+
Sbjct: 125 ARMDIDLIDELPWSCIFIDEVHRVKNPRSKLASAFSRFTCKRRYGLSGTVIQNGYEELWT 184
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP-ERFIRIADERKQHLVAVLRKYLLRRT 374
+ +W PG++GTR+ + + ++PL+ GQ +A E ++ A K +L + LRRT
Sbjct: 185 VLNWTNPGAVGTRKQWESYVEKPLRLGQSKSASDEEHVKAALVAKVLTEKLLPQLFLRRT 244
Query: 375 KEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
K+ I + K D VVFC ++ Q Y+R++ L ++ LI KD C+CGS + +CC
Sbjct: 245 KQ-IIQDQLPRKTDQVVFCPLTPTQVAIYKRIINLDAVKSLIYKDALCTCGSRKPRKKCC 303
Query: 435 KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
+ D + + L +ISNHL LI P+P D ++ ++ ELA F P
Sbjct: 304 HPVHQGD---------LFKYMSTLIKISNHLALILPSPTDTIEQTARNRELARMAFSPGP 354
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
G A + CGK + LE L+ W +K+L+F+ SV++L++LE L
Sbjct: 355 IPKYGPA-------MLKPDYCGKWQVLETLLKDWKKDSNKVLIFTKSVKLLEMLEFHLNA 407
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
+G+ F +LDGST + R ++D F P+ +FLIST AGG GLNL +AN+VVIFDPNWN
Sbjct: 408 EGHGFVKLDGSTKQSERMPVIDRFQEDPNIFIFLISTMAGGTGLNLTAANKVVIFDPNWN 467
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
PA DLQA DR++RFGQ R V V+RLL AGS+EEL+Y RQVYKQQ + + L+ RYFE
Sbjct: 468 PAHDLQAMDRAYRFGQTRDVSVYRLLGAGSIEELIYARQVYKQQQMQVGYNASLQTRYFE 527
Query: 675 GVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE-----------SHEEQGQQQERHHCTN 723
GVQ K QGELFGI N+F+ L T IE ++ +R +
Sbjct: 528 GVQGDKNKQGELFGIKNIFKLHESTLATKMAIERANISDLDWAFAYMGGRGGAKRPKAKH 587
Query: 724 QGFKGL-ETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKP-----LLEDMGIVYAHRND 777
G K + E + K+ + G+ + PEM T++P L +G+ Y HRND
Sbjct: 588 DGVKWVYEEEAKTGKEYDEFRGLGALLFDDAAPEM--TNEPNDVEKTLNSLGVQYTHRND 645
Query: 778 DIV 780
++
Sbjct: 646 ALI 648
>gi|410978268|ref|XP_003995517.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Felis catus]
Length = 838
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 365/638 (57%), Gaps = 50/638 (7%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ +F + PL S+DG+ +P +IN L ++Q
Sbjct: 238 IFDDEDLEKPYFPDR---------KFPSSAVAFPL--SEDGD----SIPYTINRYLRDYQ 282
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS-----------TI 190
REG +FLY + G ILGDDMGLGKT+Q I+FLAAV K + + ++
Sbjct: 283 REGAQFLYAHFIQGKGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRSM 342
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLI 250
K+ K LI+ P SV+ NW E W F V++ HG +D L +++ E+ +
Sbjct: 343 KKETPSIAKKMFLIVAPLSVLYNWRDELDTWGYFRVTVLHGNKKDYELIRVKQRKCEIAL 402
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN +
Sbjct: 403 TTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNM 462
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ + DW PG LG+R +F++ + +P++HGQR TA +R + + Q L + +
Sbjct: 463 KELWCVMDWAVPGLLGSRIYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWF 522
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PCSC S +
Sbjct: 523 LRRTK-TLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCNSGRKK 581
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
CC + ++ L L LQ+ + LIK + VF
Sbjct: 582 RNCCFKTNSHGETVK---TLYFSYLAVLQKET----LIK--------------RICDQVF 620
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D V +++ +F LSD K GKM+ L++L+ DKILLFS+S ++LD+L++
Sbjct: 621 SKFPDFV-QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKILLFSFSTKLLDVLQQ 679
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+FD
Sbjct: 680 YCMAAGLDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFD 739
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK 670
P WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V + K
Sbjct: 740 PTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 799
Query: 671 RYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 800 RYFEAVQGSKEHRGELFGVYNLFKLRSQASCLTRDILE 837
>gi|189208600|ref|XP_001940633.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976726|gb|EDU43352.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1311
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 256/693 (36%), Positives = 380/693 (54%), Gaps = 50/693 (7%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD--ESS 186
+PA I L ++Q EGV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK E
Sbjct: 253 IPAPIAQWLRDYQVEGVQFLHERFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKTGTERD 312
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG---PNRDMILEK 240
+ K + K + VLI+CP +++QNWE E S+W + V YHG +R +L
Sbjct: 313 AKCMRKIRRFGKSRWYPRVLIVCPGTLMQNWEDELSKWGWWEVYRYHGSSAADRKGVLGA 372
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E++IT++ +YR H S ++ V+W+ VI DE H++K++ +++ A ++ RIG
Sbjct: 373 AAKGMLEIMITTYTTYRNHESEINTVDWDCVIADECHQIKSKNAEITKAMNKINALCRIG 432
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QNK E++NL +W PG+ G+ + +++ PLK GQ A + + R Q
Sbjct: 433 LTGTAIQNKYEEIWNLLNWARPGAYGSAQEWKQKISLPLKLGQAHDATNAQLADSRSRAQ 492
Query: 361 HLV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
LV +L LRR K I + K D V+FC +++ Q AYR L+ + +
Sbjct: 493 DLVHKILPSVFLRRMKT-LIADQLPKKSDRVIFCQLTETQADAYRTFLESDRCEWIRTAK 551
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C C S T+ CC +G + + PC+V Q+++NHL LI P + +KQ
Sbjct: 552 ERCDCRSGKTRGYCCYVELPEEGEKWSNY--IFPCMVTFQKLANHLALIVPMSTENQEKQ 609
Query: 480 RKDAE---LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
KD + LA D+ + N + S + CGK + L +L+ W S GDK+L
Sbjct: 610 AKDLQTLQLACPSTFKDLFQIRDN-----ILVQSQREFCGKWKVLRRLLDFWHSNGDKVL 664
Query: 537 LFSYSVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
+FS+SVR+L +L G Y+FS LDGS R V DFN+ P++ VFLIST+AG
Sbjct: 665 IFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEDRSQAVADFNADPNQFVFLISTKAG 724
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLN+ SAN+VV+ DP+WNPA DLQAQDR++R GQ R+V VFRL+S+G++EE+VY RQ+
Sbjct: 725 GVGLNITSANKVVVMDPHWNPAYDLQAQDRAYRIGQTRNVEVFRLVSSGTIEEVVYARQI 784
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHE 710
YKQQ +NI + E+RYF GV D +GELFG+ NLF +++ +I+ +
Sbjct: 785 YKQQQANIGYNASEERRYFRGVMDQSTKKGELFGLENLFTFQENSVLLRDIMHKTNVAES 844
Query: 711 EQGQQQERHHCTNQGFKGLETHIVSSKDSNT---------------------LLSTGSKT 749
+ G H F + I+S+K+ T S G K
Sbjct: 845 KAGVNAYDFHVDESQFDSEDEDILSNKNLGTEDDANIASIKKFADSFLSKSGAASKGKKV 904
Query: 750 RKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK 782
K P+ +L G+ Y H N +++ +
Sbjct: 905 TKRGGPDPVNA---ILAKAGVQYTHENSEVIGR 934
>gi|355753484|gb|EHH57530.1| hypothetical protein EGM_07189, partial [Macaca fascicularis]
Length = 713
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/642 (38%), Positives = 365/642 (56%), Gaps = 39/642 (6%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF + LS DG+ +P ++N L ++
Sbjct: 94 IFDDEDLEKPYFPNRKFPSSSVA------------FKLSDDGD----SIPYTVNRYLRDY 137
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 138 QREGAQFLYGHYIHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNRPEFLLRG 197
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V+I HG +D L +++ E+
Sbjct: 198 MKKEPPSSAAKKMFLIVAPLSVLYNWKDELDTWGYFRVTILHGNRKDNELIRVKQRKCEI 257
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 258 ALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQN 317
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LGTR F++ + +P++HGQR TA +R + + Q L +
Sbjct: 318 NMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSG 377
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 378 WFLRRTKA-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGR 436
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ--ISNHLELIKPNPRDEPDKQRKDAELA 486
+ CC + ++ + L L K N + +K N D++ +
Sbjct: 437 KRRNCCYKTNSHGETVKTLYLSYLTVLQKYLAPCFGNLKKSLKSN-----DQETLIKRIC 491
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD
Sbjct: 492 DQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLD 550
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
+L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN V
Sbjct: 551 VLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVV 610
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
V+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V
Sbjct: 611 VLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGS 670
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
+ KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 671 ENAKRYFEAVQGSKEHQGELFGIHNLFKLRSQGSCLTRDILE 712
>gi|355567955|gb|EHH24296.1| hypothetical protein EGK_07933, partial [Macaca mulatta]
Length = 713
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/642 (38%), Positives = 365/642 (56%), Gaps = 39/642 (6%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF + LS DG+ +P ++N L ++
Sbjct: 94 IFDDEDLEKPYFPNRKFPSSSVA------------FKLSDDGD----SIPYTVNRYLRDY 137
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 138 QREGAQFLYGHYIHGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNRPEFLLRG 197
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V+I HG +D L +++ E+
Sbjct: 198 MKKEPPSSAAKKIFLIVAPLSVLYNWKDELDTWGYFRVTILHGNRKDNELIRVKQRKCEI 257
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 258 ALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTILQN 317
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LGTR F++ + +P++HGQR TA +R + + Q L +
Sbjct: 318 NMKELWCVMDWAVPGLLGTRTCFKKQFSDPVEHGQRHTATKRELATGRKAMQRLARRMSG 377
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 378 WFLRRTKA-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGR 436
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ--ISNHLELIKPNPRDEPDKQRKDAELA 486
+ CC + ++ + L L K N + +K N D++ +
Sbjct: 437 KRRNCCYKTNSHGETVKTLYLSYLTVLQKYLAPCFGNLKKSLKSN-----DQETLIKRIC 491
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD
Sbjct: 492 DQVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLD 550
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
+L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN V
Sbjct: 551 VLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVV 610
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
V+FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V
Sbjct: 611 VLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGS 670
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
+ KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 671 ENAKRYFEAVQGSKEHQGELFGIHNLFKLRSQGSCLTRDILE 712
>gi|452844864|gb|EME46798.1| hypothetical protein DOTSEDRAFT_61357 [Dothistroma septosporum
NZE10]
Length = 887
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/662 (38%), Positives = 380/662 (57%), Gaps = 33/662 (4%)
Query: 68 PETRREKAPVEKSNVFDDEEKEK------EQEQEKFGRH-QLGQFQFDH---TGPFEPLV 117
PE ++ A K+++ +KE EQE F H + DH +GP EP+
Sbjct: 31 PEYVKDWAAQWKAHMASSGDKELCYPPQLRDEQESFPAHLETRPILPDHIPKSGPCEPIE 90
Query: 118 LSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA 177
+ D + +P +I L +Q +G ++LY+ Y + GGILGDDMGLGKTIQ I+FL
Sbjct: 91 IGNDADIIPGIIPGTIAQYLKPYQVDGAEWLYRRYLIQEGGILGDDMGLGKTIQIISFLT 150
Query: 178 AVFGK-----DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP 232
A FGK D I + N+ D +LIICP ++ NW E RW ++V +YHG
Sbjct: 151 AAFGKNANETDRKRMRAIRRQNEDDWYPRILIICPGGLMANWRNELERWGYWHVDVYHGT 210
Query: 233 --NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
+++ L + +E++IT++ +Y S+++ + W+ VI DE H K+ KS + A
Sbjct: 211 RKSKEAALATATSGRLEIMITTYTTYTHDESVINTIRWDCVIADECHLFKSRKSDICKAM 270
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+ + R GL+GT++QN EL+ +W PG LG +++ PLK GQ A
Sbjct: 271 MNVNALCRFGLSGTVIQNNYEELWVQLNWCRPGKLGPIINWKNKICTPLKVGQSHDATNT 330
Query: 351 FIR----IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+R IA++ +++L L ++ +RRTK I + K D VVFC ++ +Q AY
Sbjct: 331 QLRTTRRIAEKLQRYL---LPQFFIRRTKA-LIADQLPKKSDKVVFCPLTPIQAAAYNHF 386
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ + + LPC+CGS CCK+ ++G LV P LV LQ++SNHL
Sbjct: 387 TDDELVHTIRDATLPCTCGSGKKSGWCCKQ--EVEGWGDWRK-LVFPVLVTLQKLSNHLA 443
Query: 467 LIKPNPRDEPDKQRKDAE-LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
L+ P+ +P++ KD + L AV PD D + I + + CGK + L++L+
Sbjct: 444 LLLPHGESDPERVAKDIQRLRVAV--PD-DWKKYVDMKDKTIDWAKSEYCGKWKVLKRLL 500
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
W GDK+L+FS+SVR+L++L+ F Y S L G RQ+ VD +N+ P +
Sbjct: 501 QLWHDNGDKVLIFSHSVRLLELLQMFFKTTTEYVVSYLTGQMSYEERQAEVDAYNADPGR 560
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLIST+AGG+GLN+ SAN+VVI DPNWNPA D QAQDR++R GQ+R V VFRL+S G+
Sbjct: 561 FVFLISTKAGGVGLNITSANKVVIMDPNWNPAWDQQAQDRAYRMGQQRDVDVFRLISVGT 620
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+EE+VY RQ+YKQQ +NI E+RYF+GVQD K+ +GE+FG+ NLF +++N+ +
Sbjct: 621 VEEIVYARQIYKQQQANIGYDASNERRYFKGVQDQKDQKGEIFGLANLFAPMAENVVLQD 680
Query: 705 II 706
I+
Sbjct: 681 IV 682
>gi|330917877|ref|XP_003297996.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1]
gi|311329044|gb|EFQ93908.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1]
Length = 1069
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/702 (36%), Positives = 382/702 (54%), Gaps = 68/702 (9%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD--ESS 186
+PA I L ++Q EGV+FL++ + + G ILGDDMGLGKTIQ IAFL A FGK E
Sbjct: 254 IPAPIAQWLRDYQVEGVQFLHEKFVKQTGAILGDDMGLGKTIQVIAFLTAAFGKTGTERD 313
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHG---PNRDMILEK 240
+ K + K + VLI+CP +++QNWE E S+W + V YHG +R +L
Sbjct: 314 AKCMRKIRRFGKSRWYPRVLIVCPGTLMQNWEDELSKWGWWEVYRYHGSSAADRKGVLGA 373
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+E++IT++ +YR H S ++ V+W+ VI DE H++K++ +++ A ++ RIG
Sbjct: 374 AAKGMLEIMITTYTTYRNHESEINTVDWDCVIADECHQVKSKNAEITKAMNKINALCRIG 433
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QNK E++NL +W PG+ G+ + +++ PLK GQ A + + R Q
Sbjct: 434 LTGTAIQNKYEEIWNLLNWARPGAYGSAQEWKQKISLPLKLGQAHDATNAQLADSRSRAQ 493
Query: 361 HLV-AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
LV +L LRR K I + K D V+FC +++ Q AYR L+ + +
Sbjct: 494 DLVHKILPSVFLRRMKT-LIADQLPKKSDRVIFCQLTETQADAYRTFLESDRCEYIRTAK 552
Query: 420 LPCSCGSPLTQVECC--------KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
C CGS T+ CC ++ N + PC+V Q+++NHL LI P
Sbjct: 553 ERCDCGSGKTRGYCCYVELPEEREKWSNY----------IFPCMVTFQKLANHLALIVPM 602
Query: 472 PRDEPDKQRKDAEL----ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
+ +KQ KD + + F + ++ + S + CGK + L +L+
Sbjct: 603 STENQEKQAKDLQTLQLACPSTFKSLFQI------RDNILVQSQREFCGKWKVLRRLLDF 656
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKG--YSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
W S GDK+L+FS+SVR+L +L G Y+FS LDGS R V DFN+ P++
Sbjct: 657 WHSNGDKVLIFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEDRSQAVADFNADPNQF 716
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
VFLIST+AGG+GLN+ SAN+VV+ DP+WNPA DLQAQDR++R GQ R+V VFRL+S+G++
Sbjct: 717 VFLISTKAGGVGLNITSANKVVVMDPHWNPAYDLQAQDRAYRIGQTRNVEVFRLVSSGTI 776
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
EE+VY RQ+YKQQ +NI + E+RYF GV D +GELFG+ NLF +++ +I
Sbjct: 777 EEVVYARQIYKQQQANIGYNASEERRYFSGVMDQSTKKGELFGLENLFTFQENSVLLRDI 836
Query: 706 IE----SHEEQGQQQERHHCTNQGFKGLETHIVSSK------DSNT-------------- 741
+ + + G + H F + I+S++ D+N
Sbjct: 837 MHKTNVAESKAGVKAYDFHVDESQFDSEDEDILSNRNLGIDDDANMAGIKKFADSFLFKS 896
Query: 742 -LLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK 782
S G K K P+ +L G+ Y H N +++ +
Sbjct: 897 GAASKGKKVTKRGGPDPVNA---ILAKAGVQYTHENSEVIGR 935
>gi|260811612|ref|XP_002600516.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae]
gi|229285803|gb|EEN56528.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae]
Length = 606
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/580 (40%), Positives = 370/580 (63%), Gaps = 19/580 (3%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P Q+PA+IN L ++QREGV+FLY+ ++ G ILGDDMGLGKT+Q I+FL+AV G+
Sbjct: 3 PSAQIPATINRYLRDYQREGVQFLYRQFERGMGAILGDDMGLGKTVQVISFLSAVLGRTG 62
Query: 185 SSDSTI-LKDNKV--DKKGYV-LIICPSSVIQNWEIEFSRWSTFNVSIYHG-PN-RDMIL 238
+ + I K ++ DK +V LI+ P+SV+ NW E W F V YHG P+ RD +L
Sbjct: 63 TREDIINFKKKQIPPDKDQHVFLIVSPASVLYNWLDELETWGHFRVGKYHGDPSLRDEVL 122
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLEL 293
+ E ++V+IT++++ R + L+E+N W VIVDE H++K +K+K+ A L
Sbjct: 123 TRAEQGRLDVVITTYETLRRN---LNEMNSVRFEWSAVIVDECHKIKEKKAKITEAMGRL 179
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
+ R R+GLTGTI+QN +ME++ + +W PG LG + FR + +P++ GQ++ + +R +
Sbjct: 180 RVRRRVGLTGTILQNNLMEMWCVLNWANPGCLGDDKDFRVKFVKPIEEGQKMNSTKRQLA 239
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + + L + +K+ +RRTK+ I + K++ VVFC +S Q+ Y+ +L+ ++Q
Sbjct: 240 EARRKAKVLSNLRKKWFIRRTKK-IIADQLPTKDEQVVFCKLSSFQQTCYQSVLESEDVQ 298
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+++++ PC C S L Q +CC N +G L+ L L ++SNH+ L+ P +
Sbjct: 299 LVLHQNDPCDCNSGLKQRDCCYE-TNAEGESVKE--LMFSYLSVLLKVSNHVALLLPEMQ 355
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
++ + VF V A+ +F LSD K CGKM+ L++L+ + +
Sbjct: 356 GSKKALKRTQRVCDVVFKKHPHFVK-LAREAAFRTLSDPKYCGKMQVLQQLLDVFNKQRR 414
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRA 593
K+L+FS+ ++LDI+E++L+ G +SRLDG+T ++ R +V DFN++P+ + L+ST A
Sbjct: 415 KVLVFSFYTKLLDIIEQYLMSTGEVYSRLDGTTRTSDRLRIVKDFNTNPNILLCLVSTTA 474
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLGLN A+ V++F+P WNPA D QAQDR++R GQ++ V V+RL++ G++EE +Y RQ
Sbjct: 475 GGLGLNFTGASVVILFEPTWNPANDQQAQDRAYRIGQRQDVRVYRLVTMGTIEENMYLRQ 534
Query: 654 VYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
VYKQQLS IAVS K +RYF GV K+ QGE+FGI N+F
Sbjct: 535 VYKQQLSEIAVSDKTARRYFTGVAGRKDEQGEIFGISNMF 574
>gi|164426466|ref|XP_960853.2| hypothetical protein NCU04229 [Neurospora crassa OR74A]
gi|157071347|gb|EAA31617.2| hypothetical protein NCU04229 [Neurospora crassa OR74A]
Length = 1135
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/729 (35%), Positives = 384/729 (52%), Gaps = 93/729 (12%)
Query: 83 FDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGE--YPIIQVPASINCRLLEH 140
F D+EK EQ +F+ + +P KD E Y +PA I L ++
Sbjct: 156 FSDDEKGTRYEQRP---------KFEESSGIKPCRPYKDVELEYSAGIIPACIAQYLRDY 206
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK--DESSDSTILKDNKVDK 198
Q EGVKFL++ + + G ILGDDMGLGKT+Q AFL A FGK DE + K +
Sbjct: 207 QVEGVKFLHQKFVYQRGCILGDDMGLGKTVQVAAFLTAAFGKTGDERDAKRMRKMRRAGD 266
Query: 199 KGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSY 256
Y V+I+CP S+IQNW+ E RW ++V ++HG NR+ +L+ ++ +EV+IT++D+Y
Sbjct: 267 LWYPRVIIVCPGSLIQNWKNELDRWGWWHVDVFHGSNREDVLQAAKSGRIEVMITTYDTY 326
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
R ++ V W+ V+ DE H LKN S+ A ++ RIGLTGT +QN+ EL+ L
Sbjct: 327 RNCHEAVNTVEWDCVVADECHILKNTVSETTRAMDKINAMCRIGLTGTAIQNRYEELWTL 386
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRKYLLRRTK 375
+W PG GTR + E +PL GQ A + + IA + LV +L ++ LRR K
Sbjct: 387 LNWTNPGYFGTRAEWNESITKPLTAGQSHDATLKQLSIARTTAKKLVQNLLPEFFLRRMK 446
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
I H + K D VVFC ++D+Q+ AY L+ + ++N PC C S CC
Sbjct: 447 -SLIAHQLPKKSDKVVFCPLTDVQRDAYENFLEGEHVTFILNAYQPCKCHSGRAGGFCCY 505
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
+ + DG + V P ++ LQ+I+NHL L+ P+ D +KQR + + PD
Sbjct: 506 KTLS-DGRTWKSY--VFPSIITLQKIANHLTLLIPSSSDPKEKQRSELNVLQTC-APDTW 561
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
N ES + L++ + CGK + L KL+ W GDK+L+FS+S
Sbjct: 562 KELYN-NRESMLSLANPEFCGKWKILRKLLRFWHESGDKVLVFSHSF------------- 607
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
VFLIST+AGG+GLN+ SAN+VVIFDP+WNP
Sbjct: 608 ------------------------------VFLISTKAGGVGLNITSANKVVIFDPHWNP 637
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI + E+RYF+G
Sbjct: 638 SYDLQAQDRAYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQANIGYNASNERRYFKG 697
Query: 676 VQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI-- 733
VQ K +GELFG+ NLF +D + +I+ + E N +E +
Sbjct: 698 VQRDKNRKGELFGLENLFTFHADQVVLRDIV----NKTNIAEAKAGVNLTDIDMEKAVKD 753
Query: 734 -----------VSSKDSNTLLSTGSKTRKSSDP----EMARTSKP-------LLEDMGIV 771
KD +T +S+ +K + +P E +++ KP +L G+
Sbjct: 754 EDEELDFIKKESEDKDDDTGMSSLAKLVTAEEPDKLLEASKSKKPKSDAIAAILASAGVE 813
Query: 772 YAHRNDDIV 780
Y H N +++
Sbjct: 814 YTHENSEVI 822
>gi|358060357|dbj|GAA93762.1| hypothetical protein E5Q_00408 [Mixia osmundae IAM 14324]
Length = 1263
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 393/710 (55%), Gaps = 55/710 (7%)
Query: 119 SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+KDG + ++PASIN L +QREG + L++ Y G +L DDMGLGKTIQ IAFL+A
Sbjct: 493 TKDGR--LCEIPASINRFLRNYQREGAQSLFRHYNKTEGALLCDDMGLGKTIQVIAFLSA 550
Query: 179 VFGKDESSDST------ILKDNKVDKKGYV----LIICPSSVIQNWEIEFSRWSTFNVSI 228
+ ++ +S I + +K DK + LII P SVI NW E + WS ++ I
Sbjct: 551 IMAQNGTSSDALRRTRHIREHDKPDKPTQLGPTALIIVPLSVIDNWAREITTWSFLSIGI 610
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
Y G R L+ + +VLI D+ R ++++ +I+DE H +KN ++ +
Sbjct: 611 YRGSERKQALQDFKNGYADVLIAGQDTVRNEIESFADLDLTCIILDECHTVKNADAQKTV 670
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
A + + R GLTGT MQN+ EL+ + DW P +GT E ++ +P++ Q TA
Sbjct: 671 AYHQFTCQIRFGLTGTAMQNRFSELHTILDWCLPTRVGTPEQWKVLVTDPIQAAQSKTAT 730
Query: 349 ERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
+ R Q L +L Y+LRRTK I + K D ++FC M+ Q AY L
Sbjct: 731 PAELSAGRIRAQQLAHNLLPHYMLRRTKA-IIADQLPSKVDKIIFCPMAPRQLEAYLCAL 789
Query: 408 QLPEIQ-CLINKDLPCS-CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ +++ I++D PC+ C S L CC L D+ F +LP + L +I+NH+
Sbjct: 790 RSDKLRNAAISRD-PCAMCNSGLEFRHCC-----LKAIDADWFHHILPGVQLLLKIANHI 843
Query: 466 ELIKPNPR---DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
LI P+ R +P++ K+ F G FI +D CGK +
Sbjct: 844 VLIHPDRRLRKTKPERYEKERGWYLTAFP---GTAAGQIPGPDFIHTTDRSLCGKWEPVA 900
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY--SFSRLDGSTPSNLRQSLVDDFNS 580
+L+Y ++ GDK+LLFS S R+LD LE + I + Y ++ RLDGSTPS R L D+FN+
Sbjct: 901 QLLYHFSMHGDKVLLFSRSKRLLDALETW-INEDYPTAWLRLDGSTPSQDRLGLCDEFNT 959
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
S K VFLIST AGG+GLNLV AN+V+IFDPNWNPA DLQAQDR+FR+GQ R V VFRL+
Sbjct: 960 SARKFVFLISTAAGGVGLNLVGANKVIIFDPNWNPALDLQAQDRAFRWGQIRDVEVFRLV 1019
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF--QGELFGICNLFRDLSD 698
++G+LEE++Y RQ+YKQQ +N+A + E+RYF GVQD + QG+LFG NLF D
Sbjct: 1020 ASGTLEEVIYARQIYKQQQTNVAYTAANERRYFAGVQDSSKTSEQGDLFGCKNLFAFRGD 1079
Query: 699 NLFTSEI-IESHEEQGQQQERHHCTNQGFKGLETHIVS--SKDSNTLLSTGSKTRKSSD- 754
++ +E IE C + + L T + + +KD + + RK++D
Sbjct: 1080 DITMTEASIED------------CNMEELEYLYTKVTADQAKDDEAAGAFAAGLRKTTDE 1127
Query: 755 ----PEMARTSK--PLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDL 798
P A + +L +GI Y H ++ ++ + +++ ++I Q+L
Sbjct: 1128 DPLAPASADVGQIDIILNSVGINYTHAHNAVIGESNIERKRTRDAIKQEL 1177
>gi|453086718|gb|EMF14760.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 918
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/592 (40%), Positives = 346/592 (58%), Gaps = 25/592 (4%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P SI L +Q +G ++L++ + + G +LGDDMGLGKTIQ IAFL FGK ++D
Sbjct: 130 IPPSIAQYLKPYQIDGTRWLHEKFVKQQGALLGDDMGLGKTIQVIAFLTVAFGK--TADE 187
Query: 189 TILKDNKVDKKG-------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN--RDMILE 239
LK + +K VLIICP ++I+NW++E RW +++ YHG ++ L
Sbjct: 188 RDLKRMRYKRKNEPGTWYPRVLIICPGTLIENWKVELDRWGYWHIYTYHGSASAKEDALA 247
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
E +E++IT++D+Y+ S ++ V W+ VI DE H +K KS+ A + R
Sbjct: 248 AAEGGRLEIMITTYDTYKRDESSINCVTWDCVIADEVHTIKERKSQNAQAMNNVNALCRF 307
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
GL+GT +QNK EL+ L +W PG + T +++ PLK GQ A ++A R+
Sbjct: 308 GLSGTTIQNKYEELWTLLNWANPGCVSTIANWKSAICMPLKIGQSHDA--TLSQLAKARR 365
Query: 360 QHL---VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ +L + LRRTK I H + K D VVFC +++ Q AY+ + +
Sbjct: 366 TAIGLTQNLLPNFWLRRTKA-LIAHQLPKKSDRVVFCPLTETQVTAYQNFTDSELVHAIR 424
Query: 417 NKDLPCSCGSPLTQVECCKR-LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ PC C S Q CC+ ++ G + V P LV LQ++SNH+ L+ P +
Sbjct: 425 DSSEPCFCDSGKKQGHCCRESIEGFGGWKN----QVFPALVTLQKLSNHVALMVPKADAD 480
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
++ KD E D + + N N SF+ + CGK L+KLM W GDK+
Sbjct: 481 AERLEKDLEKLRIALPDDWEELYQNRDNLSFLARPEF--CGKWNVLKKLMKLWYDNGDKV 538
Query: 536 LLFSYSVRMLDILEKFL-IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
L+FS+SVR+L +L L + Y+ S LDGS RQ VD FNS PS+ FLIST+AG
Sbjct: 539 LIFSHSVRLLRMLNLLLKFKTSYNISFLDGSMTYLDRQKEVDAFNSQPSQFAFLISTKAG 598
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+S G++EE+VY RQ+
Sbjct: 599 GVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQTRDVEVFRLVSVGTVEEIVYARQI 658
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
YKQQ +NI + +E+RYF+GVQD K+ +GE+FG+ NLF + N+ +I+
Sbjct: 659 YKQQQANIGYNASVERRYFKGVQDNKDQKGEIFGLANLFAPVQANVVLRDIV 710
>gi|338719517|ref|XP_001916162.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Equus caballus]
Length = 700
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/633 (38%), Positives = 360/633 (56%), Gaps = 57/633 (9%)
Query: 79 KSNVFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRL 137
+S +FDDE+ EK KF + FQ LS+DG+ +P +IN L
Sbjct: 120 RSFIFDDEDLEKPYFPDRKFPSSSVA-FQ-----------LSEDGD----SIPYTINRYL 163
Query: 138 LEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVD 197
++QREG +FLY + G ILGDDMGLGKT+Q
Sbjct: 164 RDYQREGAQFLYGHFIQGRGCILGDDMGLGKTVQMF------------------------ 199
Query: 198 KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYR 257
LI+ P SV+ NW+ E W F V+I HG +D L +++ E+ +T++++ R
Sbjct: 200 -----LIVAPLSVLYNWKDELDTWGYFRVTILHGNKKDNELIRVKQRKCEIALTTYETLR 254
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN + EL+ +
Sbjct: 255 LCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVM 314
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
DW PG LG+R +F++ + +P++HGQR TA +R + + + L + + LRRTK
Sbjct: 315 DWAVPGLLGSRINFKKQFSDPVEHGQRHTATKRELATGRKAMRRLAKKMSGWFLRRTKV- 373
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S + CC +
Sbjct: 374 LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCSSGRKRRNCCYKT 433
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--AELASAVFGPDID 495
++ L L LQ+++NH+ L++ KQ++ + VF D
Sbjct: 434 NSHGETVKT---LYFSYLAVLQKVANHVALLQAA---SASKQQETLIKRICDQVFSKFPD 487
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L+++ +
Sbjct: 488 FVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQYCMAS 546
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
G + RLDG+T S R +V +FNS+ + L+ST AGGLGLN V AN VV+FDP WNP
Sbjct: 547 GLDYRRLDGNTKSEDRIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNP 606
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
A DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V + KRYFE
Sbjct: 607 ANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEA 666
Query: 676 VQDCKEFQGELFGICNLFRDLS-DNLFTSEIIE 707
VQ KE QGELFG+ NLF+ S ++ T +I+E
Sbjct: 667 VQGSKEHQGELFGVYNLFKLRSHESCLTRDILE 699
>gi|409075837|gb|EKM76213.1| hypothetical protein AGABI1DRAFT_63554, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 737
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 272/721 (37%), Positives = 375/721 (52%), Gaps = 94/721 (13%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGL------- 166
EPLVL + + +VPASIN L ++QREGV F + Y+ GG+LGDDMGL
Sbjct: 43 EPLVLDEKTK---TEVPASINTYLRDYQREGVIFFWNQYQAGRGGLLGDDMGLRLFLYVL 99
Query: 167 -GKTIQTIAFLAAVFGKDESSDSTILKDNKV----------------------DKKGYVL 203
GKTIQ I+FL+A+ K S I KD + D L
Sbjct: 100 IGKTIQVISFLSAIMRK---SGVIIDKDRRRKHISNLQDLDAWRERRHLPPANDTWPTCL 156
Query: 204 IICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSIL 263
II P++V+ NWE E W F V +Y+G ++ E + + SFD R +L
Sbjct: 157 IIAPTTVVHNWERELETWGYFEVGLYNGSRKER-----EPVLRDFKMGSFDIARKDIDLL 211
Query: 264 SEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPG 323
+ W+ V VDE HR+KN SKL +A + R GLTGT +QN E++ + DW PG
Sbjct: 212 DTLAWDCVFVDEVHRVKNVWSKLTLALHQFACSRRFGLTGTTIQNSYQEMWTILDWTNPG 271
Query: 324 SLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ-HLVAVLRK------YLLRRTKE 376
LGT ++++ +PL GQ A E +ER Q +VAV+ K + LRRTK
Sbjct: 272 RLGTSRQWQKYVVKPLTAGQSAAATE------EERAQAQMVAVILKTKLLPEFFLRRTKN 325
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
I + + K D VVFC +S Q AY+RLL + +Q L ++ C CGS + CC
Sbjct: 326 -IIKNQLPNKSDQVVFCPLSQKQAIAYKRLLGMEAVQHLTLREYSCPCGSGRARKSCCH- 383
Query: 437 LDNLDGCDSCPFCL--VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
PF V + L ++SNHL LI P + + ++ LA F PD
Sbjct: 384 ----------PFVPGDVFRYMSILIKLSNHLALILPGRETDFRQTARNRALADIAF-PD- 431
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLI 553
GNA + + CGK + L+ W +KIL+F+ SV++LD+L+ L
Sbjct: 432 ----GNAPKYG-TAMMRPQYCGKWAVI--LLREWRKDPSNKILVFTKSVKLLDMLDFHLK 484
Query: 554 RKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNW 613
+GY F +LDGST + R SL+D F+ P VFLIST AGG GLNL AN+VVIFDPNW
Sbjct: 485 TQGYGFVKLDGSTKKSDRMSLIDKFHCDPKIFVFLISTLAGGTGLNLTGANKVVIFDPNW 544
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
NPA DLQA DR+FRFGQ R V V+RLL AGS+EEL+Y RQ+YKQQ I + ++ RYF
Sbjct: 545 NPAHDLQAMDRAFRFGQTRDVSVYRLLGAGSVEELIYARQLYKQQQMEIGYNASIQTRYF 604
Query: 674 EGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE---------SHEEQGQQQERHHCTNQ 724
EG+Q +GELFGI N+F+ L T IE + G + R T
Sbjct: 605 EGIQGDNSKKGELFGIENIFKYHESALATKMAIEKANLAELDWALANMGNNRSRK--TKA 662
Query: 725 GFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTS-----KPLLEDMGIVYAHRNDDI 779
+ +E SK+ +TL G+ P+++ + + +L +G+ Y+H ND+I
Sbjct: 663 TAELVEADAGISKEDSTLKGLGALLFDDEAPKLSTLNEEDSIQAILNTIGVKYSHLNDEI 722
Query: 780 V 780
+
Sbjct: 723 L 723
>gi|412988974|emb|CCO15565.1| DNA excision repair protein [Bathycoccus prasinos]
Length = 1068
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/533 (39%), Positives = 324/533 (60%), Gaps = 41/533 (7%)
Query: 202 VLIICPSSVIQNWEIEFSRWS---------TFNVSIYHGPNRDMILEKLEAC-GVEVLIT 251
+LII P+++I NW+ EF +W NV++ HG NR+++ + +E GV+V+IT
Sbjct: 314 ILIIVPATLIDNWKNEFEKWGEAIGDDEIWDVNVAVAHGNNREVVYDDIENHRGVDVVIT 373
Query: 252 SFD--SYRIHGS----ILSEVNWEIVIVDEAHR-LKNEKSKLYMACLELKTRNRIGLTGT 304
+ + S I + I + NW+ ++DE H +KN K++ A ++K + + GLTGT
Sbjct: 374 TVNIISRDIQSNPDFNIWTNTNWDFCVIDEMHNSMKNPKTQSSKAMRQMKCQ-KFGLTGT 432
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
QNK EL+ +FD + +G+ HF+ +Y+ P+ + +A I + +R L
Sbjct: 433 PYQNKAEELHTIFDALNSNCIGSLSHFKSYYERPMHKARSASASAYEIGLGRKRAMQLNG 492
Query: 365 VLRKYLLRRTKEETI-GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
+L Y+L+R K+ + M K + VVFC ++ Q+RAY R+ + +Q ++NKD PC
Sbjct: 493 LLSIYMLKREKKRVLKAGTMKKKTEKVVFCDLAPAQRRAYERIRESTSVQLILNKDSPCD 552
Query: 424 CGSPLTQVECCKRLDNLDGCD----------------SCPFCLVLPCLVKLQQISNHLEL 467
CGS + +CC + L+ D +CP C+ C+ + +SNHLEL
Sbjct: 553 CGSGEKRNKCCYPANGLNDDDGDEMWCAYGPHNRHGRTCPMCVGFACVFACRNVSNHLEL 612
Query: 468 IKP-----NPRDEPDKQRKDAE-LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
+KP NP++E + K A+ +A G ++D +GG ++F+ S+ CGKM+ L
Sbjct: 613 LKPFDLPPNPKEEDVAKFKRAQAVAKVALGDELDALGGLRPQQNFLAASNFDHCGKMKTL 672
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
L+ + + DK++LFSYSVR+L+++ +F+ RKGY RLDG TP RQ +VDDFN
Sbjct: 673 SILLERFYKRNDKVVLFSYSVRLLNVMNEFVKRKGYVHVRLDGGTPVKERQKIVDDFNKR 732
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
S +FL+S+ AGG+GLN+ SAN+V+IFDP WNPA+DLQ+QDR +R G KR+V V+RL+S
Sbjct: 733 GSCFLFLMSSEAGGVGLNVASANKVIIFDPAWNPAKDLQSQDRVYRLGNKRNVEVYRLIS 792
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR 694
AG+LEELVY+RQ+YK Q+ + GK+E+R FEG+Q K +GEL+GI NL R
Sbjct: 793 AGTLEELVYSRQIYKLQMGSTMTDGKMERRIFEGIQGDKTKKGELWGIVNLLR 845
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAA 178
++VP + RL E+QR+GV+FL+ LY GG+L D+MGLGKT+Q +AF A
Sbjct: 153 LEVPIKLAERLQEYQRDGVRFLHGLYARNLGGLLADEMGLGKTVQVVAFATA 204
>gi|258576005|ref|XP_002542184.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902450|gb|EEP76851.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 960
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/585 (40%), Positives = 333/585 (56%), Gaps = 30/585 (5%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK- 182
Y + +PA I L ++Q EG FL++L+ + GGILGDDMGLGKT+Q IAFL A +GK
Sbjct: 210 YSLGLIPAPIAQWLRDYQVEGTSFLHELFVYQKGGILGDDMGLGKTVQVIAFLTAAYGKT 269
Query: 183 -DESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMIL 238
DE + K + + LIICP ++IQNW+ E W + V +YHG ++D L
Sbjct: 270 GDERDAKRMRKMRRRGGNPWYPRTLIICPGTLIQNWKSELDCWGWWYVEVYHGDSKDEAL 329
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ VE+LIT++ +YR++ L+ V W+ V+ DE H +K KS+ + EL R
Sbjct: 330 RSAASGRVEILITTYTTYRMNKDALNMVEWDCVVADECHLMKERKSETAKSMHELNALCR 389
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
IGLTGT +QNK EL+ L +W PG G ++ +PLK GQ A + A +
Sbjct: 390 IGLTGTAIQNKYEELWTLLNWSNPGRFGPVSTWKTTISDPLKIGQSHDATVYQLSKARKT 449
Query: 359 KQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ LV +L + LRR K I + K D VVFC ++D Q AY LL ++ +
Sbjct: 450 AKKLVKNLLPAFFLRRMKA-LIADQLPKKSDLVVFCPLTDTQVDAYENLLDSDIVEYIKM 508
Query: 418 KDLPCSCGSPLTQVECC-------KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
PC CGS CC R N V P + LQ++ NHL + P
Sbjct: 509 SSDPCPCGSGKKSGWCCFTTVPNGGRWQNY----------VFPTISNLQKLCNHLATLIP 558
Query: 471 NPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
P D +KQ +D + PD +L S + S+ + CGK + L+KL+ W
Sbjct: 559 QPTDPDEKQERDLRMLEVAV-PDQWRELYRTRG---SILNYSNPEFCGKWKVLKKLLKWW 614
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL 588
S GDK+L+FS+SVR+L +L+ Y+ S LDG+ R +V+DFN+ P + VFL
Sbjct: 615 HSHGDKVLVFSHSVRLLKMLQLLFNHTSYNVSYLDGAMSYEDRAKVVNDFNADPRQFVFL 674
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
IST+AGG+GLN+ SAN+VV+ DPNWNP+ DLQAQDR++R GQ R V VFRL+SAG++EE+
Sbjct: 675 ISTKAGGVGLNITSANKVVVVDPNWNPSHDLQAQDRAYRIGQLRDVEVFRLVSAGTIEEI 734
Query: 649 VYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
VY RQ+YKQQ +NI + E+RYF+GVQ+ K +G F LF
Sbjct: 735 VYARQIYKQQQANIGYNASTERRYFKGVQEKKRSKGRDFWSLQLF 779
>gi|402220273|gb|EJU00345.1| hypothetical protein DACRYDRAFT_23259 [Dacryopinax sp. DJM-731 SS1]
Length = 1044
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/592 (39%), Positives = 325/592 (54%), Gaps = 37/592 (6%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF---GKDE 184
QVPASIN L ++QR+GV+F + +K GG+LGDDMGLGKTIQ I+FLAA+ G
Sbjct: 249 QVPASINRFLRDYQRDGVRFFWNCWKEGRGGVLGDDMGLGKTIQVISFLAAITRRTGDAR 308
Query: 185 SSDSTILKDNKVDKKGY-------------VLIICPSSVIQNWEIEFSRWSTFNVSIYHG 231
+D K+ ++ + LI+ P S++ NW E W F + Y
Sbjct: 309 DADKRRKHVLKLQRRLFSSQLPPADSDSPTCLIVAPVSLVDNWARELDTWGWFEWAKYTS 368
Query: 232 P----NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
R+ ++ +++++TS D R L+++ W ++ VDEAH+LKN S+L
Sbjct: 369 KMTRLEREDVVRDFRIGRLDIVLTSHDCARGDIEQLADLRWSVIFVDEAHKLKNPHSRLT 428
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A + R G+TGT +QN +EL+ L DW PG +G + + PL GQ A
Sbjct: 429 EAMHRFQHGARFGMTGTAIQNSYLELWTLLDWANPGRVGRLSQWEFYVSRPLVLGQSSDA 488
Query: 348 PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ K+ LV +L LRRTKE G L K DNVVFC +++ Q Y+
Sbjct: 489 TVSQKSRMETVKRGLVERLLPGMFLRRTKEIIKGQLPK-KTDNVVFCRLTERQTAVYKLF 547
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
LQ P++ +I PC CGS ++ EC + S + VKL SNH+
Sbjct: 548 LQHPDVDIIIKHAEPCECGSKKSRGECHHKFLTTSDPWSNGVLKYMSLFVKL---SNHVA 604
Query: 467 LIKPNPRDEPD---KQRKDAELASAVFGPDIDLVGGNA-QNESFIGLSDVKSCGKMRALE 522
L+ P+ D PD + R E + F + +L Q E + CGK L
Sbjct: 605 LLYPSEHDTPDQRIRNRGYVEYLTEHFIDERELWRAPVVQYEPTL-------CGKWEVLS 657
Query: 523 KLMYSWASKGD-KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+ +W +GD K+L+FS SV++LDIL+ F+ + Y F RLDG P+ R VD FN+
Sbjct: 658 TFLKAWKEEGDSKVLIFSKSVKLLDILQTFVEQAAYEFCRLDGKVPAEKRMDEVDSFNTD 717
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
P+ +FLIST AGG+GLNL +AN+VVIFDPNWNPA DLQA DR++R GQ R V V+RLL
Sbjct: 718 PNVFIFLISTLAGGVGLNLTAANKVVIFDPNWNPAHDLQAMDRAYRIGQNRDVTVYRLLG 777
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
AGSLEELVY RQ+YKQ IA G ++RY+ GVQ + QGELFGI N+F
Sbjct: 778 AGSLEELVYARQLYKQAQMRIAYEGSDQRRYWAGVQGYRVKQGELFGIQNIF 829
>gi|452983968|gb|EME83726.1| hypothetical protein MYCFIDRAFT_203723, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 911
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/685 (37%), Positives = 385/685 (56%), Gaps = 41/685 (5%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
I +PA I L +Q +G ++L++L+ + GGILGDDMGLGKTIQ IAFL FGK +
Sbjct: 113 IGSIPAPIAKFLKPYQVDGTEWLHRLFVTQKGGILGDDMGLGKTIQIIAFLTVAFGK--T 170
Query: 186 SDSTILKDNKVDKKGY-------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDM 236
+D K +V + Y VLIICP ++++NW+ E RW ++V YHG +D
Sbjct: 171 ADERDAKRMRVFRNKYEDLWYPRVLIICPGTLMENWKNELDRWGWWHVYTYHGSAVEKDS 230
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
L + +E+++T++ +Y ++++ W+ VI DE H +KN KS+ A +
Sbjct: 231 ALAAAASGRLEIMMTTYTTYTNSQDAINQIRWDCVIADECHSIKNHKSETSQAMNNVNAL 290
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RIGLTGT +QN EL+ L +W PG + + ++ PLK GQ A ++ A
Sbjct: 291 CRIGLTGTAIQNNYEELWVLLNWTNPGCVSSLASWKRRICVPLKLGQSHDATNSQLKKAR 350
Query: 357 ERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ + LV +L ++ LRRTK I H + K D VVFC +++ Q +AY + + +
Sbjct: 351 DLAKKLVQNLLPRFFLRRTKA-LIAHQLPKKTDRVVFCPLTETQAQAYNNFVDHELVHAI 409
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL-VLPCLVKLQQISNHLELIKPNPRD 474
+ PC CGS Q CC + ++G P+ + V P L +Q++SNHL L+ P
Sbjct: 410 RDSQEPCYCGSGKKQGWCC--MAYVEGYG--PWNMFVFPVLHTIQKLSNHLALMLPTGIA 465
Query: 475 EPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
+P+K K+ + A + PD+ DL ++ ++ + CGK + L+KL+ W G
Sbjct: 466 DPEKHEKELD-AMKIALPDLWKDLY---QTRDNIKHKANAEFCGKWKVLKKLLKLWYDNG 521
Query: 533 DKILLFSYSVRMLDILEK-FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
DK+L+FS+SV++L +LE F Y+ S LDGS RQ VD++N++P++ VFLIST
Sbjct: 522 DKVLVFSHSVKLLTMLELLFRSTTTYNVSYLDGSLSYAARQEAVDEYNANPNQFVFLIST 581
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGG+G+N+ SAN+VVI DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY
Sbjct: 582 KAGGMGINVTSANKVVIMDPNWNPAYDLQAQDRAYRIGQTRDVEVFRLVSAGTVEEIVYA 641
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESH-- 709
RQ+YKQQ + I + +E+RYF+GVQ E +GE+FG+ NLF L N+ +I+
Sbjct: 642 RQIYKQQQAQIGYNASVERRYFKGVQGQAEHKGEIFGLKNLFAPLKTNVVLQDIVNKTNI 701
Query: 710 -------EEQGQQQERHHCTNQGFKGL------ETHIVSSKDSNTLLSTGSKTRK-SSDP 755
E G + E F+ + T S + +L S+ RK D
Sbjct: 702 AEARAGVEIAGLELESTPGDEDEFEAIGRAQRESTEAGISDLAAEILDEPSRKRKLQQDN 761
Query: 756 EMARTSKPLLEDMGIVYAHRNDDIV 780
K +L G+ Y H N +++
Sbjct: 762 AKKDAVKAILASAGVEYTHENAEVI 786
>gi|403417435|emb|CCM04135.1| predicted protein [Fibroporia radiculosa]
Length = 1076
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/695 (35%), Positives = 358/695 (51%), Gaps = 66/695 (9%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGK-----TIQTIAFLAAVFGKD 183
VPA IN L ++QREG++F ++ YK + GGILGDDMGL + ++ + +D
Sbjct: 295 VPAQINTFLRDYQREGIRFFFERYKTRRGGILGDDMGLKNGDKRDIDRRRKHVSRLQDED 354
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKL 241
S + D LII PSSV+ NWE EF W F V IY G R +L
Sbjct: 355 PSWKRSRTLPPANDTWPTCLIISPSSVVGNWEREFETWGYFEVGIYTGLPKERADVLRDF 414
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ ++V++TSF++ R ++L ++ W +++DE HR+KN +S L A R GL
Sbjct: 415 KMGRLDVVVTSFETARNDIALLDDLAWSCIVIDEVHRVKNPRSALAAAFSRFICTIRFGL 474
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN E + + DW PGS+GT+ + F PL GQ +A E K
Sbjct: 475 TGTAIQNSFQEFWTILDWANPGSVGTKNQWEGFVSRPLTVGQSKSATEE-----QRTKGI 529
Query: 362 LVA------VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
LVA +L K+ LRRTK+ I + + GK+D VVFC ++ Q Y+R+L + +Q +
Sbjct: 530 LVAQILTDKLLPKFFLRRTKD-IIKNQLPGKDDQVVFCPLTATQIEVYKRILNMEPVQNM 588
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ KD PC CGS + +CC D D + LV L +ISNHL LI P+P D
Sbjct: 589 MRKDEPCDCGSKEKRRKCCHPFDRGD---------LFRYLVTLIKISNHLALILPSPSDT 639
Query: 476 PDKQRKDAELASAVFGPD-IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-D 533
P++ ++ EL+ FG + I G + F CGK LE L+ W +
Sbjct: 640 PEQTARNRELSRIAFGNETIPKYGPSILTSRF--------CGKWTVLESLLEDWKKDALN 691
Query: 534 KILLFSYSVRMLDILEKFLIRKG---------------------YSFSRLDGSTPSNLRQ 572
K+L+F+ S+++L++LE L + + +LDGST ++ R
Sbjct: 692 KVLIFTKSIKLLEMLEFHLRSRSEILPQFTANAADDVDASNLLDTGYVKLDGSTKASDRM 751
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN--WNPAQDLQAQDRSFRFGQ 630
SL+D F+ P VFLIST AGG GLNL AN+V + + PA DLQA DR++RFGQ
Sbjct: 752 SLIDRFHEDPHVSVFLISTLAGGTGLNLTGANKVTRIGVSLLFYPAHDLQAIDRAYRFGQ 811
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC 690
R V VFRLL AGS+EEL+Y RQVYKQQ + + + RYFEGVQ K QGELFG+
Sbjct: 812 TRSVSVFRLLGAGSIEELIYARQVYKQQQMQVGYNASFQTRYFEGVQGEKSKQGELFGLK 871
Query: 691 NLFRDLSDNLFTSEIIESH--EEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSK 748
N+F L T + +E + G K ++KD + L +
Sbjct: 872 NIFTLHESALATKKAVEKAVLSDFNWALANVDANKSGLKTKHAAEANAKDDDNLRGLDTL 931
Query: 749 TRKSSDPEMARTS---KPLLEDMGIVYAHRNDDIV 780
PE+ + + +L D+G+ Y HRN D++
Sbjct: 932 LFDDGIPEVEKKDDGIQKILSDVGVTYIHRNADLI 966
>gi|343791237|gb|AEM61159.1| putative repair and recombination helicase RAD26L [Labeotropheus
trewavasae]
gi|343791239|gb|AEM61160.1| putative repair and recombination helicase RAD26L [Maylandia zebra]
Length = 558
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 331/564 (58%), Gaps = 20/564 (3%)
Query: 157 GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK------------VDKKGYVLI 204
G ILGDDMGLGKT+Q I FLAAV K + + + +N+ + LI
Sbjct: 1 GCILGDDMGLGKTVQVIGFLAAVLHKTGTWED--IANNRPQFLQSQQSSEQSNPSKVFLI 58
Query: 205 ICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILS 264
+ P SV+ NW+ E W F + HG ++ L +++ VE+ +T++++ R+ +
Sbjct: 59 VAPLSVLYNWKDELDTWGHFQCVVVHGLRKEEELARIKKGRVEIALTTYETLRLCLDQFN 118
Query: 265 EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS 324
+++W V+VDEAH++KN S++ A EL+ + RIGLTGTI+QN + EL+ + DW PG
Sbjct: 119 KIDWSGVVVDEAHKIKNPDSQITQAMKELRCKVRIGLTGTILQNNLEELWCVMDWAIPGC 178
Query: 325 LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM 384
LG+ HF+ + +P++ GQR +A +R + + + LV + + RRTK I +
Sbjct: 179 LGSLGHFKNKFSDPIEQGQRHSATKRALATGRKAVRALVRKISHWFFRRTKA-LIKEQLP 237
Query: 385 GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCD 444
K+D VV+C+M++ Q+ Y+ +L ++ L+ C C S T+ CC + N DG
Sbjct: 238 KKDDRVVYCSMTEFQQTVYQAVLGSEDVTLLLRSSEKCDCHSRRTRRSCCYK-TNSDGVH 296
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
L L L++++NH+ L++ P +++ + + + VF + V +NE
Sbjct: 297 MKE--LYFSYLAILRKVANHVALLQSTPGTSKKQEKYVSAVCAKVFQKFPEFVH-RCKNE 353
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
+F LSD GKM+ L+KL+ + K DK+L+FS S ++LD++E + + G FSRLDG
Sbjct: 354 AFEALSDPMYSGKMKVLQKLLKFYLQKRDKVLIFSLSTKLLDVMESYCMAVGLDFSRLDG 413
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
ST S R +V DFNSS + L+ST AGGLGLN V AN VV+FDP WNPA DLQA DR
Sbjct: 414 STKSKERVQIVRDFNSSSHINLCLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDR 473
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V + +RYFE V+ + +
Sbjct: 474 AYRIGQCRDVTVLRLISLGTVEEVIYLRQIYKQQLHSSVVGKESSRRYFEAVRGHGDHKD 533
Query: 685 ELFGICNLFR-DLSDNLFTSEIIE 707
ELFGI NLFR T +I+E
Sbjct: 534 ELFGIKNLFRLQTQGTCLTRKILE 557
>gi|409043119|gb|EKM52602.1| hypothetical protein PHACADRAFT_261138 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1192
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 258/750 (34%), Positives = 373/750 (49%), Gaps = 95/750 (12%)
Query: 98 GRHQLGQFQFDHTGPFEPLVLSKDGEYP-----------IIQVPASINCRLLEHQREGVK 146
G+ LG F + P S DG+ P +I++PAS N L ++QR+GV+
Sbjct: 349 GQLPLGPFALSESHVHVPSA-SADGKPPDLNDHSNRKPRVIRIPASANTHLRDYQRKGVE 407
Query: 147 FLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS--------TILKDNKVDK 198
+ Y GG LGDDMGLGKT+Q +FL+A+ K + + L+D + K
Sbjct: 408 VMCGWYFAGRGGCLGDDMGLGKTVQISSFLSAIMEKTGTPRDLNRRYKYISKLQDEVIRK 467
Query: 199 --KGYV------------------LIICPSSVIQNWEIEFSRWSTFNVSIY----HGPNR 234
KG V LII PSS+I NWE E W F V Y R
Sbjct: 468 RPKGQVVRDWEKELPRADARWPTALIIVPSSLIGNWERELETWGYFEVGTYTSNIKAETR 527
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ +L +++L+T+ + R + I+ VDEAH++K+ K+ A +
Sbjct: 528 ENVLRDFRLGRLDMLLTTHELARDQVDRFESLAISIIFVDEAHKVKDPTRKITKAFNRFQ 587
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
+ R+ +TGT +QN EL+ L DW PG+LG+ + ++ + +PL GQ +A
Sbjct: 588 CKRRVAVTGTAIQNNYDELWALLDWTNPGALGSIKQWQRYVSKPLTRGQSKSA------T 641
Query: 355 ADERKQHLVA-------VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
ADE+ + ++ L ++ +RRTK E + + K D VVFC ++ Q YRR++
Sbjct: 642 ADEKLRGIMVSKILKEEFLPRFFIRRTK-ELLKDQLPKKTDEVVFCPLTPKQTEVYRRII 700
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
+ +Q L+ KD C CGS + +CC + D D + + L +ISNHL L
Sbjct: 701 ESEPVQNLVRKDECCDCGSRKKRAQCCHKFDKAD---------LFRYMSALIKISNHLAL 751
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
I P+P D PD+ ++ LA FG G A + + CGK LE L+
Sbjct: 752 ILPSPTDTPDQVVRNKALAKVAFGDGYIPSYGPA-------MLVPQYCGKWLVLETLLQE 804
Query: 528 WASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W +K+L+F+ SV++L++LE L + F +LDGS R L+D F+ V
Sbjct: 805 WQKDASNKVLIFTKSVKLLEMLEFHLKSQSVGFVKLDGSIKQPDRMPLIDRFHEDSDVFV 864
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FLIST AGG GLNL AN+VVIFDPNWNPA DLQA DR++R GQKR V ++R L AGSLE
Sbjct: 865 FLISTLAGGTGLNLTGANKVVIFDPNWNPAHDLQAMDRAYRIGQKRDVSIYRFLGAGSLE 924
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
EL+Y RQ+YKQQ + L+ RYFEGVQ K QGELFGI N+F + T I
Sbjct: 925 ELIYARQIYKQQQMAVGYDASLQTRYFEGVQGDKSRQGELFGIRNIFGLAEGEVRTKMTI 984
Query: 707 ESHE--------EQGQQQERHHCTNQGFKGL-ETHIVSSKDSNTLLSTGSKTRKSSDP-- 755
E + + T K + E + K+ L G+ P
Sbjct: 985 EKATLTDLDWALANMDAKVKQPATKVKDKWVYEAEVKGKKEDVDLRGLGAFLFDDDAPAV 1044
Query: 756 -----EMARTSKPLLEDMGIVYAHRNDDIV 780
E+++T L+D+G+ Y HRN+ ++
Sbjct: 1045 DDQEDEISKT----LKDVGVTYTHRNEALI 1070
>gi|302676696|ref|XP_003028031.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8]
gi|300101719|gb|EFI93128.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8]
Length = 765
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/710 (34%), Positives = 362/710 (50%), Gaps = 56/710 (7%)
Query: 108 DHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLG 167
D P P VL K + I +P +N L +QR+G++F+Y YK GG LGDDMGLG
Sbjct: 54 DAPKPIGPHVLDKVKK---IYIPNPVNRFLRPYQRDGIQFMYDCYKENRGGCLGDDMGLG 110
Query: 168 KTIQTIAFLAAVFGK--------------DESSDSTILKDNKVDKKG---YVLIICPSSV 210
KTIQ I+FL+A+ GK E D + N L + P+S
Sbjct: 111 KTIQVISFLSAIMGKTGTVRDRYRRRDYVSELQDRPDWRTNMPRANARWPTALTVVPTST 170
Query: 211 IQNWEIEFSRWSTFNVSIY----HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEV 266
+ NW+ EF++W F + +Y + R +L + ++++I S D R ++
Sbjct: 171 VANWDREFNKWGHFELGVYTSQLNKDERAGMLRDYKLGRLDLIIVSHDMLRREIDSFDDL 230
Query: 267 NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLG 326
V +DEAH +K + L A + R LTGT++QN ME++ + DW PG+LG
Sbjct: 231 AISCVFLDEAHVIKRADAGLTQAVNRFECMRRFALTGTLIQNSYMEMHPVLDWTNPGALG 290
Query: 327 TREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL-VAVLRKYLLRRTKEETIGHLMMG 385
TR ++ +PL GQ +A R DE + L +L ++ LRRTK G L
Sbjct: 291 TRAQWKSTIVKPLVVGQSASATAEQRRKQDEIAEILNKVILPRFFLRRTKYLIKGQLPQ- 349
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K D VFC ++ +Q+ Y+R+L LPE+Q LI K+ C CGS + CC
Sbjct: 350 KHDEAVFCPLAPIQREVYKRILALPEVQDLILKEDLCPCGSRKARKNCCHPFQ------- 402
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
P L + + L +NH+ L+ P P D P++ + A+L V DI G +
Sbjct: 403 -PENLFV-YMHHLISCANHVALLLPGPNDTPEQIERYADLNKRVMK-DIYADEGKRYKLT 459
Query: 506 F-IGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLD 563
+ + + CGK+ W +G +K+L+F+ S++++++LE + R Y F +LD
Sbjct: 460 YSLAILQRDMCGKLD-------QWYKEGSNKVLIFTKSLKLMEVLEFHMKRDSYEFRKLD 512
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
GS P RQ +D+FN P FLIST AGG G+NL +AN+VVIFDPNWNPA DLQA D
Sbjct: 513 GSVPQKYRQKYIDEFNEQPEVFCFLISTLAGGTGINLTAANKVVIFDPNWNPAHDLQAMD 572
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQ 683
R+FR+GQ R V V+RLL GSLEELVY RQ+YKQQ I + R+F GVQ + Q
Sbjct: 573 RAFRYGQTRDVYVYRLLGGGSLEELVYARQLYKQQQMAIGYDASAQTRFFTGVQGDPQKQ 632
Query: 684 GELFGICNLFRDLSDNLFTSEIIE--SHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNT 741
GELFGI N+F D T IE + + + + ++ +++
Sbjct: 633 GELFGIKNMFTYHEDEQTTKMAIERATIADLDFNLAKGSAGSLKKGKDGKKLLGKEEAAD 692
Query: 742 LLSTG-------SKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQP 784
L G S +K P+ A + +L + G+ Y HRND+++ P
Sbjct: 693 LRGLGAFMFDDLSPKKKQKQPQTA--EQRILSEGGVTYTHRNDELIKGAP 740
>gi|307105234|gb|EFN53484.1| hypothetical protein CHLNCDRAFT_136777 [Chlorella variabilis]
Length = 1320
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 262/718 (36%), Positives = 356/718 (49%), Gaps = 146/718 (20%)
Query: 111 GPFEPLVLS--KDGE----------YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG 158
GP E L L+ +DGE Y VPASIN L +QR+G++FL + Y GG
Sbjct: 360 GPNEELRLAVGEDGEPWPEDAQEEAYLNFAVPASINRFLRSYQRDGIRFLMRQYARGTGG 419
Query: 159 ILGDDMGLGK--------------------TIQTIAFLAAVFGKDESSDSTILKD----- 193
ILGDDMGLGK T+Q I F+AAV GK D L +
Sbjct: 420 ILGDDMGLGKPLLPFRSYKQTHLAGSRAGKTVQAIGFIAAVLGKTGDLDDAHLPELQPLR 479
Query: 194 --------------NKVDKKGY---------VLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
V+ Y VL++ P+SV++NWE EF V++
Sbjct: 480 KIEPLPDSEGETQWGLVNDDAYAPDYSTCYPVLVVAPTSVLENWEREFDM-----VAVCK 534
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
RD + D G L + W + + DEAH LKN +K YM
Sbjct: 535 SKQRD----------------AGDP----GEELLTIPWHMALFDEAHFLKNSLTKRYMLG 574
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
L TR R GLTGT QN E++ + +++APG LG R+ + + P+ GQ+ ++ +
Sbjct: 575 SRLPTRLRYGLTGTPFQNDYAEIWAVMNFMAPGCLGERKEYMDGTARPIMRGQQASSSDN 634
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ E + L AVL +Y+LRRTK+ I M K D VFC +S LQ AY+RLL+ P
Sbjct: 635 AKAVGAEAQHELRAVLARYMLRRTKK-LIADQMPKKMDYAVFCELSPLQLAAYKRLLESP 693
Query: 411 EIQCLINKDLPC-SCGSPLTQVECCK-RLDNLDGCDSCPFCLVLPCLVKL---------- 458
+++ L+N PC CGS +CC +++ G P C
Sbjct: 694 DVELLLNHREPCLECGSGEPYYKCCGWKVEEERGGVLWPMYHCCECDDAYDKDYNPKGCR 753
Query: 459 --------QQISNHLELIKPNPRDE---PDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
Q NHLEL+K DE P K +K ++A V G D +GG +E FI
Sbjct: 754 NHKPDGCWQYTPNHLELVKAQHEDEIKDPRKFKKALQIAELVIGEDSAALGGYVTSEEFI 813
Query: 508 GLSDVKSCGKMRA----------------------------------LEKLMYSWASKG- 532
LSD +CGKM A L+ L+ +W G
Sbjct: 814 RLSDTSTCGKMEASCAALRYAALCCALLECAQLLPDSWIRVMLHITALDALLKTWRDAGS 873
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
+K+LLFS SV+ L+IL+ + GY + LDGS P RQ+L D FN+ PS +FLIST
Sbjct: 874 NKVLLFSNSVQTLNILKAMVTASGYDYIMLDGSVPQAERQTLCDKFNTQPSTFIFLISTL 933
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL +AN+VVIFDP+WNPA DLQAQDR+FR GQKR V V+RL++AG++EE++Y R
Sbjct: 934 AGGVGLNLTAANKVVIFDPSWNPAMDLQAQDRAFRIGQKRDVSVYRLIAAGTMEEIIYDR 993
Query: 653 QVYKQQLSNIAVSGKLE-KRYFEGVQDC-KEFQGELFGICNLFRDLSDNLFTSEIIES 708
Q+YKQ S I + G R FEG + +E GELFG+ NL + + + T E IE+
Sbjct: 994 QLYKQMHSEIVLEGNTAMPRTFEGAKTGNREDHGELFGMLNLLKHNKEKILTLEYIEN 1051
>gi|345565496|gb|EGX48445.1| hypothetical protein AOL_s00080g74 [Arthrobotrys oligospora ATCC
24927]
Length = 1148
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/740 (34%), Positives = 380/740 (51%), Gaps = 67/740 (9%)
Query: 80 SNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGP---FEPLVLSKDGEYPIIQVPASINCR 136
SN+F D+E E +EK QF P +E +VL + +PASI
Sbjct: 288 SNIFSDDEDVLEDLEEKP--------QFPGASPCRAYEDIVLERSRGV----IPASIARW 335
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q EGV+F++ + G ILGDDMGLGKT+Q IAFL A FGK + +
Sbjct: 336 LRDYQIEGVRFMHNAFILNTGVILGDDMGLGKTVQVIAFLTAAFGKTGDARDSRRMRRMR 395
Query: 197 DKKG-----YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN--RDMILEKLEACGVEVL 249
D++ VLI+CP ++I NW E W + V YHG ++ L +E+L
Sbjct: 396 DRRPDEWYPKVLIVCPGTLISNWIRELETWGWWQVYAYHGAKGAKEDALRAARTGYLEIL 455
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
IT++D+YR + ++ + W++VI DE ++K S + A + + R+GLTGT + N
Sbjct: 456 ITTYDTYRRDQAKINMIEWDVVIADECQKVKERTSGITEAMNVVNSLCRVGLTGTAIMNH 515
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VLRK 368
EL+NL +W+ PG +GT ++ + PLK GQ + + A LV +L +
Sbjct: 516 YGELWNLLNWIRPGEVGTYSDWKNDIENPLKIGQAHGSTNAELARARSTANDLVKNLLPR 575
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
LRR K I H + K D VVFC + LQ+ Y L+ + + C CGS
Sbjct: 576 MFLRRMKS-LIAHQLPKKTDRVVFCKLGALQQEVYENYLESEIVGLVKYSTDKCDCGSHK 634
Query: 429 TQVECC-KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
T+ +CC ++L+ DG V PC+ ++ + NHL P + +KQ KD E
Sbjct: 635 TRGKCCYRKLE--DGTTVSQ--AVFPCITNMKLLCNHLANWIPRDGESLEKQEKDIEKLQ 690
Query: 488 AVFGPDIDLVGG---NAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSV 542
I L G + + F + D + CGK + L+KL+ W + K+L+FS S
Sbjct: 691 ------IGLPGNWEKYYRRQHFENVMDPEFCGKWQVLQKLLAFWKENEEAAKVLIFSGSK 744
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVS 602
++L +L L Y+ LDG R + V++FN+ PS FLISTRAGG+GLN+VS
Sbjct: 745 KLLKMLYMLLNNTHYNICYLDGEMSLEDRTAAVENFNTDPSYFAFLISTRAGGVGLNIVS 804
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
AN+VV+FDP+WNP+ DLQAQDR++R GQ+R V VFRL+ AG++EE+VY RQ+YKQQ +NI
Sbjct: 805 ANKVVVFDPSWNPSHDLQAQDRAYRIGQRRDVEVFRLVCAGTIEEMVYARQIYKQQQANI 864
Query: 663 AVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESH------------- 709
E+RYF+GV +GELFG+ NLF +N+ EI+
Sbjct: 865 GYEASFERRYFKGVMKDASRRGELFGLKNLFTFHQENVVLQEIVNQTNVAESKTGIAILN 924
Query: 710 --EEQGQQQERHHCTNQGFKGLET-------HIVSSKDSNTLLSTGSKTRKSSDPEMART 760
+ G + + +G E + S D+N +TG+ + DP A
Sbjct: 925 MPDISGDGPDESTVFGEEGRGDEVDDIIGQIQAMVSDDANNPATTGANKKMKLDPVSA-- 982
Query: 761 SKPLLEDMGIVYAHRNDDIV 780
+L G+ Y H N +++
Sbjct: 983 ---ILVSAGVEYTHDNTEVI 999
>gi|351706732|gb|EHB09651.1| Putative DNA repair and recombination protein RAD26-like protein
[Heterocephalus glaber]
Length = 1861
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 325/552 (58%), Gaps = 20/552 (3%)
Query: 173 IAFLAAVFGKDESSDST-------ILKDNKVD-----KKGYVLIICPSSVIQNWEIEFSR 220
I+FLAAVF K + + +L+ K + K LI+ P SV+ NW+ E
Sbjct: 469 ISFLAAVFHKKGTHEDIENNMPEFLLRSIKKEPTSSTAKKMFLIVAPLSVLYNWKDELDT 528
Query: 221 WSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
W F V+I HG +D L ++ E+ +T++++ R+ L+ + W +IVDEAHR+K
Sbjct: 529 WGYFRVTILHGNKKDNELIRVMQRKCEIALTTYETLRLCLDELNSLEWSAIIVDEAHRIK 588
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N K+++ A LK RIGLTGTI+QN + EL+ + DW PG LG+R HF++ + +P++
Sbjct: 589 NPKARITEAMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFQKQFSDPVE 648
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
HGQR TA +R + + L + +LLRRTK I + KED +V+C+++D QK
Sbjct: 649 HGQRHTATKRELATGRRAMRRLAEQMSGWLLRRTKT-LISDQLPKKEDRMVYCSLTDFQK 707
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD-NLDGCDSCPFCLVLPCLVKLQ 459
Y+ +L+ ++ ++ PC+C S + CC + + + L L L LQ
Sbjct: 708 AVYQTVLEAEDVTLILQSSKPCTCNSGRKRRNCCYKASISTNSRGETVKTLYLSYLTVLQ 767
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+++NH+ L++ ++ + VF D V +++ +F LSD K GKM+
Sbjct: 768 KVANHVALLQATSTSR-QQETLIKRICDQVFSKFPDFVQ-KSKDAAFETLSDPKYSGKMK 825
Query: 520 A---LEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
A L++L+ + DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V
Sbjct: 826 ASAVLQQLLNHFRKNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLRIVK 885
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
+FNS+ + L+ST AGGLGLN + AN V++FDP WNPA DLQA DR++R GQ R V V
Sbjct: 886 EFNSTQDVNICLVSTMAGGLGLNFIGANVVILFDPTWNPANDLQAIDRAYRIGQCRDVKV 945
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
FRL+S G++EE++Y RQVYKQQL + V + KRYFE VQ KE +GELFGI NLF
Sbjct: 946 FRLVSLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGIYNLFTLR 1005
Query: 697 SD-NLFTSEIIE 707
S + T +I+E
Sbjct: 1006 SQGSCLTRDILE 1017
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQ 141
+FDDE+ EK ++ F+ LS+DG+ +P +IN L ++Q
Sbjct: 221 IFDDEDLEKPYFPDRKFPSSASAFK-----------LSEDGD----SIPYTINRYLRDYQ 265
Query: 142 REGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
REG +FLY+ Y G ILGDDMGLGKT+Q A+
Sbjct: 266 REGAQFLYRHYIQGRGCILGDDMGLGKTVQGTAW 299
>gi|432117564|gb|ELK37803.1| Putative DNA repair and recombination protein RAD26-like protein
[Myotis davidii]
Length = 1421
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/495 (40%), Positives = 301/495 (60%), Gaps = 8/495 (1%)
Query: 203 LIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSI 262
LI+ P SV+ NW E W F V+I HG +D L +++ E+ +T++++ R+
Sbjct: 3 LIVAPLSVLYNWRDELDTWGYFRVTILHGNKKDNELIRVKQRKCEIALTTYETLRLCLDE 62
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
L+ ++W VIVDEAHR+KN K+++ LK RIGLTGTI+QN + EL+ + DW P
Sbjct: 63 LNSLDWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVP 122
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LG+R HF++ + +P++HGQR TA +R + + Q L + + LRRTK I
Sbjct: 123 GLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQ 181
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD-NLD 441
+ KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S + CC + + +
Sbjct: 182 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILRSSEPCTCSSGRKRRNCCYKASISTN 241
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGG 499
L L LQ+++NH+ L++ KQ++ + VF D V
Sbjct: 242 SHGETVKTLYFSYLAVLQKVANHVSLLQAA---STSKQQETLIKRICDQVFSRFPDFVQ- 297
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSF 559
+++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L+++ + G +
Sbjct: 298 KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQYCMASGLDY 357
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+FDP WNPA DL
Sbjct: 358 RRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDL 417
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDC 679
QA DR++R GQ R V VFRL+S G++EE++Y RQVYKQQL + V + KRYFE VQ
Sbjct: 418 QAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLQCVVVGSENAKRYFEAVQGS 477
Query: 680 KEFQGELFGICNLFR 694
KE +GELFG+ N+F+
Sbjct: 478 KEHRGELFGLYNIFK 492
>gi|296424567|ref|XP_002841819.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638068|emb|CAZ86010.1| unnamed protein product [Tuber melanosporum]
Length = 823
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 248/671 (36%), Positives = 352/671 (52%), Gaps = 54/671 (8%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L ++Q EG FL+K + + G ILGDDMGLGKT+Q IAFL A FGK + D
Sbjct: 52 IPCPIAQYLRDYQVEGAAFLHKNFVFQEGCILGDDMGLGKTVQVIAFLTAAFGK--TGDE 109
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNR-DMILEKLEACGVE 247
K + ++G R S S+ G R + LE A E
Sbjct: 110 RDRKRMRKMRRGA-----------------GRKSG---SLMSGDERKESALEAARAGRCE 149
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
VLIT++ +Y+ ++ V W+ VI DE H++K+ ++++ A E+ RIGLTGT +Q
Sbjct: 150 VLITTYGTYKKACGDINMVEWDCVIADECHQIKDRRTEVTKAINEINALCRIGLTGTAIQ 209
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-VL 366
N EL+ L +W PGS+GT + + PLK GQ A R I A + + LV +L
Sbjct: 210 NNYEELWTLLNWCRPGSIGTLTEWNKAIAIPLKIGQSHDATLRQIGNARKIAKRLVNNLL 269
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG- 425
K LRR K I H + K D VVFC ++++Q++AY+ L +Q + C CG
Sbjct: 270 GKMFLRRLKT-LIAHQLPKKSDKVVFCPLTEVQRKAYQGFLDSEMVQNIKYSGQVCDCGK 328
Query: 426 -----SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
P + CC D+ +V PC+ ++Q++SNHL P D + +
Sbjct: 329 LNKNGEPAKRGGCCYVTDSTG---RKWKEMVFPCIQQIQKLSNHLANWIPQNEDNQETRD 385
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
K EL D + + E D + CGK L+KL+ W DK+L+FSY
Sbjct: 386 KKRELLETCLPDDFERI---INREMLTNFMDPEMCGKWIVLQKLLKFWHQNDDKVLIFSY 442
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
S+++L IL K Y+ DGS + R ++V +FNS PS+ VFLISTRAGG+GLN+
Sbjct: 443 SLQLLRILHKLFQSTEYNVCYFDGSMSLDDRTNVVAEFNSDPSQFVFLISTRAGGVGLNI 502
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+AN+VVIFDPNWNP+ DLQAQDR++R GQ R V VFRL+ AG++EE+VY RQ+YKQQ +
Sbjct: 503 TAANKVVIFDPNWNPSYDLQAQDRAYRIGQTRDVEVFRLILAGTIEEIVYARQIYKQQQA 562
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE----SHEEQGQQQ 716
NI E+RYF GVQ K QGELFG+ NLF +N EI+ + G Q
Sbjct: 563 NIGYGASEERRYFSGVQGDKTNQGELFGLINLFT-FQNNTILKEIVNKTNVAESRAGVQV 621
Query: 717 ERHHCTNQGFKGLE-------THIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMG 769
N+ + +E + +S + K RK+ +P A +L + G
Sbjct: 622 AGMEINNEEVEDVELDDDYEGENAISQLAAIAKGEQAIKKRKAHNPVAA-----ILAEAG 676
Query: 770 IVYAHRNDDIV 780
I Y H N +++
Sbjct: 677 ISYTHENSEVI 687
>gi|392563505|gb|EIW56684.1| hypothetical protein TRAVEDRAFT_128513 [Trametes versicolor
FP-101664 SS1]
Length = 733
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/611 (37%), Positives = 326/611 (53%), Gaps = 61/611 (9%)
Query: 203 LIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHG 260
LII PSSV+ NWE EF W F V +Y GP R +L + ++VL+TSF+ RI
Sbjct: 43 LIIAPSSVVGNWEREFETWGYFEVGMYIGPPTARASVLTDFKLGRLDVLVTSFEVARIDI 102
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
++ E+ W + +DE HR+KN +SKL A R GL+GT++QN EL+ + DW
Sbjct: 103 DLIDELPWSCIFIDEVHRVKNPRSKLAEAFSRFTCPRRFGLSGTVIQNGYEELWTVLDWT 162
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PGS+GT++ + + ++PL+ GQ +A + ++HL A L LL E+ +
Sbjct: 163 NPGSVGTKKQWETYVEKPLRVGQSKSATD---------EEHLQAALVAKLL---TEKLLP 210
Query: 381 HLMM------------GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
HL + K D VVFC ++ +Q Y+R+L L + L++KD C CGS
Sbjct: 211 HLFLRRYRIDIPLQLPQKTDQVVFCPLTPVQIAVYKRILDLEAVANLVHKDKACDCGSKK 270
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ +CC + D + + L +I+NHL LI P P D D+ ++ EL+
Sbjct: 271 ARKKCCHPVHPGD---------LFKYMSTLIKIANHLALILPAPTDTIDQTARNRELSRL 321
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDI 547
F A + + + CGK + LE L+ W +G +K+L+F+ SV++L++
Sbjct: 322 AFP-------TGALPKYGPSMLRPEYCGKWQVLETLLKGWKREGGNKVLIFTKSVKLLEM 374
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
LE L + Y F +LDGST R ++D F P+ VFLIST AGG GLNL +AN+VV
Sbjct: 375 LEFHLNSRNYGFVKLDGSTKQPDRMPMIDRFQEDPAIFVFLISTMAGGTGLNLTAANKVV 434
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FDPNWNPA DLQA DR++RFGQ R V V+RLL AGS+EEL+Y RQVYKQQ + +
Sbjct: 435 VFDPNWNPAHDLQAMDRAYRFGQTRDVAVYRLLGAGSIEELIYARQVYKQQQMQVGYNAS 494
Query: 668 LEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE-SHEEQGQQQERHHCTNQGF 726
L+ RYFEGVQ K +GELFGI N+F+ L T IE +H + G
Sbjct: 495 LQTRYFEGVQGDKHKRGELFGIQNIFKLHEHTLATKMAIERAHVSDLDWAFAYMGGKNGV 554
Query: 727 --------KGLETHIV------SSKDSNTLLSTGSKTRKSSDPEMARTSKPL---LEDMG 769
K H V + KD + G+ + PE+ + L +G
Sbjct: 555 VKRPQAKAKKAGVHWVYEEEAKTGKDYDEFRGLGALLFDDAPPELDHKPDDIEKTLNAIG 614
Query: 770 IVYAHRNDDIV 780
+ Y HRNDD++
Sbjct: 615 VHYTHRNDDLI 625
>gi|240279479|gb|EER42984.1| DNA excision repair protein [Ajellomyces capsulatus H143]
Length = 979
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 306/523 (58%), Gaps = 13/523 (2%)
Query: 191 LKDNKVDKKG------YVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEAC 244
L+D ++ ++G LI+CP +++QNW E RW +++ +YHG ++ L+ +
Sbjct: 236 LRDYQMRRRGDRVWYPRTLIVCPGTLLQNWRSELDRWGWWHIEVYHGAGKEEALQSAASG 295
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+E+++T++ +Y ++ L+ V W+ ++ DE H K KS+ + E+ RIG+TGT
Sbjct: 296 RLEIMLTTYKTYVLNKDALNMVEWDCIVADECHIFKERKSETAQSMNEINALCRIGVTGT 355
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QNK EL+ L +W PG G ++ EPLK GQ A + A + + LV
Sbjct: 356 AIQNKYEELWTLLNWTNPGKFGPVSTWKSTICEPLKLGQSHDATVYQLSKARKTARKLVE 415
Query: 365 -VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
+L + LRR K I + K D VVFC ++ Q AY R+L I+ + C
Sbjct: 416 NLLPPFFLRRMKT-LIADQLPKKSDRVVFCPLTPTQADAYERVLDSDIIEYIKTSSDKCH 474
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
CGS CC R+ G + V P + LQ++SNHL ++ P +D +KQ KD
Sbjct: 475 CGSGKKSGWCC-RMHLPQGGKWQSY--VFPAISNLQKLSNHLAILIPQSQDPTEKQDKDL 531
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
E+ PD A +S + ++ + CGK R L+KL+ W GDK+L+FS+SVR
Sbjct: 532 EILQIAL-PD-QWRQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLVFSHSVR 589
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSA 603
+L +L+ Y+ S LDG+ R +VD+FN+ + VFLISTRAGG+GLN+ SA
Sbjct: 590 LLKMLQMLFKHTSYNVSYLDGAMSYEDRAKVVDNFNADIREFVFLISTRAGGVGLNITSA 649
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
N+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG++EE+VY RQ+YKQQ +NI
Sbjct: 650 NKVVVVDPNWNPAYDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQQQANIG 709
Query: 664 VSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
+ E+RYF+GVQ+ K+ GE+FG+ N+F+ D++ +I+
Sbjct: 710 YTASTERRYFKGVQEKKDRNGEIFGLSNMFQYQGDSIVLRDIV 752
>gi|326435418|gb|EGD80988.1| hypothetical protein PTSG_01570 [Salpingoeca sp. ATCC 50818]
Length = 1332
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 355/630 (56%), Gaps = 52/630 (8%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ +P IN L +QREGV+ + K + HGG+L DDMGLGKT+Q IA LA + K +
Sbjct: 503 LSIPGPINQFLRPYQREGVETMAKWLLDGHGGVLADDMGLGKTVQVIALLATLLQK--TY 560
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGV 246
D+ + K+ VL+I P++V+ W E RW F V +HG R +L+ L A
Sbjct: 561 DAAVDAIPKL--AAPVLVISPNTVLGTWLEELERWGHFTVGKFHGSGRTRVLDALTADAA 618
Query: 247 --EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+V++T++ +++ + L++V W +V+ DEAH++++ ++KL A ++RIGLTGT
Sbjct: 619 AYDVVVTTYTTFQRDAAGLAQVPWLLVVADEAHKIRSPRAKLTTAMKSFPVQHRIGLTGT 678
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
++N EL+ L DW P +LG F P+K GQ + I +A++R + L+
Sbjct: 679 ALRNDFKELWCLLDWAWPNALGPLSQFLANVATPIKRGQVMNGTLDEIELAEQRGRELID 738
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
++ + LRRT+ G L KED VVFC M+ LQ++ Y +L ++ + ++LPC C
Sbjct: 739 KMKPFFLRRTEVVLAGQLPK-KEDRVVFCKMTPLQRKVYENILSQDDVVYITQRNLPCLC 797
Query: 425 GS------PLTQVECCKRL----------------DNLDGCDSCPFC------------- 449
+ LT+ +CC +L D+ + C C
Sbjct: 798 EANQARERQLTRSQCCYQLTRYHKRGDVCTCGGSTDDPEKIRRCRKCHCSQEAIASGTNG 857
Query: 450 ------LVLPCLVKLQQISNHLELIKPNP-RDEPDKQRKDAELASAVFGPDIDLVGGNAQ 502
L+ P +V L+ ++NH+ L+ P P DE +K+ + A+A G + L
Sbjct: 858 CMPWSYLIFPLVVLLRNVANHVALLVPRPGDDELTVIKKERDCAAAFRGEEAWLQRARRN 917
Query: 503 NESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRL 562
+ + IG D + GK++ L KL+ W + ++LLFS+S+++LDI+ +G S+ R+
Sbjct: 918 DPTAIG--DPEVSGKLKVLLKLLSIWREEDARVLLFSHSLKLLDIMMDVFRGRGVSYLRM 975
Query: 563 DGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQ 622
DG+ P+ RQ ++ FN+ + VFL+ST+ G+ L AN++VIFDP+WNPA+D QA+
Sbjct: 976 DGNMPTEERQEAINRFNAG-TVDVFLLSTKTANTGITLTRANKIVIFDPSWNPAEDRQAE 1034
Query: 623 DRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R++R GQ + V V RL+S+G++EEL+Y RQ+YKQQL+ +A+ G+ ++R+FEGVQ
Sbjct: 1035 HRAWRIGQNQDVEVVRLISSGTIEELMYARQLYKQQLAAVALEGRAQRRFFEGVQGDPSR 1094
Query: 683 QGELFGICNLFRDLSDNLFTSEIIESHEEQ 712
+GELFG+ N+F D ++I +++
Sbjct: 1095 KGELFGLDNMFASELDEELVKQVIRRRQDE 1124
>gi|71297047|gb|AAH35183.1| C9orf102 protein [Homo sapiens]
gi|119613042|gb|EAW92636.1| RAD26L hypothetical protein, isoform CRA_b [Homo sapiens]
Length = 523
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 307/508 (60%), Gaps = 11/508 (2%)
Query: 203 LIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSI 262
LI+ P SV+ NW+ E W F V++ HG +D L +++ E+ +T++++ R+
Sbjct: 23 LIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCLDE 82
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN + EL+ + DW P
Sbjct: 83 LNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVP 142
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LG+ +F++ + +P++HGQR TA +R + + Q L + + LRRTK I
Sbjct: 143 GLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKT-LIKDQ 201
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDG 442
+ KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S + CC + N G
Sbjct: 202 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYK-TNSHG 260
Query: 443 CDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD--AELASAVFGPDIDLVGGN 500
L L L LQ+++NH+ L++ KQ++ + VF D V
Sbjct: 261 --ETVKTLYLSYLTVLQKVANHVALLQAAS---TSKQQETLIKRICDQVFSRFPDFVQ-K 314
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFS 560
+++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L+++ + G +
Sbjct: 315 SKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYR 374
Query: 561 RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+FDP WNPA DLQ
Sbjct: 375 RLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQ 434
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK 680
A DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V + KRYFE VQ K
Sbjct: 435 AIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEAVQGSK 494
Query: 681 EFQGELFGICNLFRDLSD-NLFTSEIIE 707
E QGELFGI NLF+ S + T +I+E
Sbjct: 495 EHQGELFGIHNLFKFRSQGSCLTKDILE 522
>gi|336374507|gb|EGO02844.1| hypothetical protein SERLA73DRAFT_176268 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387395|gb|EGO28540.1| hypothetical protein SERLADRAFT_459076 [Serpula lacrymans var.
lacrymans S7.9]
Length = 730
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/601 (37%), Positives = 321/601 (53%), Gaps = 48/601 (7%)
Query: 203 LIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHG 260
LII PS+V+ NWE EF W F V +Y R+ +L + ++V++TSFD R
Sbjct: 43 LIIAPSTVVHNWEREFQVWGYFEVGLYTNTPSQRESVLTDFKMGRLDVVLTSFDLARRDI 102
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
S L ++ W +IVDEAHR+KN +SK+ A + R GLTGT +QN E++ + DW
Sbjct: 103 SRLDDLAWSCIIVDEAHRVKNPRSKITEAYNRFTCQRRFGLTGTAIQNSYAEMWTILDWT 162
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA-------VLRKYLLRR 373
PG LGT + ++ + +PL GQ A E +ER + L+ +L + RR
Sbjct: 163 NPGRLGTGKQWKGYVTKPLTMGQSAGATE------EERAKALIVARTLKDKLLPLFFKRR 216
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
TK+ I + K D VVFC ++ Q Y+R+L++ ++ +I+KD C CGS + EC
Sbjct: 217 TKD-IIKDQLPTKTDEVVFCPLTPTQITVYKRILEMEPVRNMIHKDELCDCGSRKQRKEC 275
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
C ++ D VL + L +ISNHL LI P P D ++ + EL+ A F +
Sbjct: 276 CHAIEKGD---------VLKYMSILIKISNHLALILPAPNDTAEQTVRHRELSEAAFSME 326
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFL 552
G A + + CGK L L+ W +K+L+F+ SV++LD+LE L
Sbjct: 327 CIPKYGTA-------MLQPQFCGKWVVLNTLLTEWRKDHSNKVLIFTKSVKLLDMLEFHL 379
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
Y F LDGST R ++D F+ +FLIST AGG GLNL AN+VVIFDPN
Sbjct: 380 KSNSYGFLTLDGSTKQADRMPMIDRFHRDSDIFIFLISTLAGGTGLNLTGANKVVIFDPN 439
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNPA DLQA DR++RFGQ R V V+RLL AGS+EEL+Y RQ+YKQQ I ++ RY
Sbjct: 440 WNPAHDLQAMDRAYRFGQTRDVSVYRLLGAGSIEELIYARQLYKQQQMAIGYQASIQTRY 499
Query: 673 FEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE-----------SHEEQGQQQERHHC 721
F+GVQ GELFGI N+F+ NL T IE +H G+ +++
Sbjct: 500 FQGVQGDTHRHGELFGIKNIFKLHETNLATKMAIERASIVELDWALAHLGAGKVKKQKPS 559
Query: 722 TNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTS--KPLLEDMGIVYAHRNDDI 779
+ +T SK+ L + P++A + L +G+ Y+HRNDD+
Sbjct: 560 AEKWVYEADTR--GSKEEADLQGLSALLFDDDPPQVAEEDEIQKTLNFVGVKYSHRNDDV 617
Query: 780 V 780
+
Sbjct: 618 L 618
>gi|242209777|ref|XP_002470734.1| predicted protein [Postia placenta Mad-698-R]
gi|220730204|gb|EED84065.1| predicted protein [Postia placenta Mad-698-R]
Length = 998
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/675 (34%), Positives = 346/675 (51%), Gaps = 84/675 (12%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGL-GKTIQTI----AFLAAVFGK 182
+ P IN L E+QR+G++F ++ YK+ GG+LGDDMGL + + ++ + +
Sbjct: 272 KAPGRINTFLREYQRDGIRFFWERYKDGRGGVLGDDMGLKSGNVNDLNRRRKHVSQLQDR 331
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEK 240
E + IL LII PSSV+ NWE EF W F V +Y GP R +L
Sbjct: 332 PEWQNDRILPPAN-QTWPTCLIIAPSSVVGNWEREFETWGYFEVGMYTGPPKERAGVLND 390
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ ++V++TSF++ R S+L ++ W VIVDE HR+KN ++ + MA + R G
Sbjct: 391 FKMGRLDVVLTSFETARKDISLLDDLAWTCVIVDEVHRVKNPRAAVAMAFNQFACTVRFG 450
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE----RFIRIAD 356
LTGT +QN E + + DW PGS+GT+ + + PL GQ +A + I +A
Sbjct: 451 LTGTAIQNSFAEFWTILDWTNPGSVGTKRQWDGYVSRPLTIGQSKSAAHEQRTKAILVAQ 510
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
K+ L L K+ LRRTK + I + GK+D VVFC ++ Q Y+R+L + +Q +I
Sbjct: 511 ILKEKL---LPKFFLRRTK-DIIKDQLPGKDDQVVFCPLTPKQTEVYKRILAIESVQNMI 566
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+ ++ H + P D P
Sbjct: 567 HH----------------------------------------VAVAKHTSIA---PSDSP 583
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKI 535
++ ++ EL+ FG + G A + + CGK LE L+ W+ +K+
Sbjct: 584 EQTARNRELSRVAFGSETIPKYGPA-------MLVPRFCGKWMVLESLLADWSKDVSNKV 636
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+F+ SV++L++LE L + F +LDGST + R L+D F+ P VFLIST AGG
Sbjct: 637 LIFTKSVKLLEMLEFHLRSRSLGFVKLDGSTKAQDRMPLIDKFHEDPDVFVFLISTMAGG 696
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
GLNL AN+VVIFD PA DLQA DR++RFGQ R V VFRLL AGS+EEL+Y RQVY
Sbjct: 697 TGLNLTGANKVVIFD----PAHDLQAIDRAYRFGQTRDVSVFRLLGAGSIEELIYARQVY 752
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE-------S 708
KQQ + + + RYFEGVQ K QGELFGI N+F D L T + +E +
Sbjct: 753 KQQQMQVGYNASFQTRYFEGVQGEKTKQGELFGIKNIFTLHEDTLATKQAVERAILSDFN 812
Query: 709 HEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTS---KPLL 765
++ + + E V+ KDS+ + S S P++ + +L
Sbjct: 813 WALANMDAKKRRSDGKATRESE---VAHKDSDNMNGLDSLLFDDSIPKVEHKVNDIQKVL 869
Query: 766 EDMGIVYAHRNDDIV 780
D+G+ Y HRN+D++
Sbjct: 870 NDIGVRYTHRNEDLI 884
>gi|443713666|gb|ELU06400.1| hypothetical protein CAPTEDRAFT_223034 [Capitella teleta]
Length = 1058
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 331/580 (57%), Gaps = 55/580 (9%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP +IN L ++QR+GV+FL+ Y G +L DDMGLGKTIQ + +S
Sbjct: 139 VPLTINRYLRDYQRDGVQFLFSHYIEGSGAMLADDMGLGKTIQLL------------HNS 186
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
+ D KV +K + LII P+SV+ NW E W F + YH N++ +E+L +++
Sbjct: 187 DLYLDPKVPRKPF-LIIGPASVLYNWIEELETWGHFAIGKYHKQNKENTMEELRKGKLDI 245
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
++T++++ R H + ++ +NW VI DEAHR+K K+ L+ + R GLTGT +QN
Sbjct: 246 VVTTYETCRDHITEINGINWNAVIADEAHRIKGPKADTTKMLKGLRCKRRYGLTGTPLQN 305
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
++ E + + DWV+PG LG F + +P++ GQ+ A +R ++A+ RK
Sbjct: 306 RLDEFWCVMDWVSPGCLGGLAQFDVEFIQPIEKGQKQDATKR--KLAEARK--------- 354
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++NVV+C + LQ Y+ +L+ ++ ++ ++ PC CGS
Sbjct: 355 ------------------DENVVYCRPAPLQLDVYKAILEHDAMKVVLLQNYPCPCGSLR 396
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ +CC + + DG L L L + +NH L+ P + ++++ E+
Sbjct: 397 QRRKCCFKKAS-DGRSIASVTLSFMHL--LLKTANHAALLLPKFTNNETQKKQAEEICLK 453
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
F + + +A +F LSD K CGKM+ L+ L+ + + ++L+FSYS ++LDIL
Sbjct: 454 AFERHPEFMK-DASRATFRTLSDPKHCGKMKVLQGLLSVFHKQKSRVLVFSYSTKLLDIL 512
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
E +++ KG+ + RLDG+TP R LV +FN +P+ +FL+ST+AGG+GLNL AN VVI
Sbjct: 513 ESYIMSKGHVYRRLDGTTPELKRLQLVKEFNQNPNIFLFLMSTKAGGVGLNLTGANVVVI 572
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKL 668
FDPNWNP DLQAQDR++R GQ R V V+RL+++G++EE +Y L ++ V
Sbjct: 573 FDPNWNPTHDLQAQDRAYRIGQLRDVHVYRLITSGTIEENIY--------LQSVTVESGN 624
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLS-DNLFTSEIIE 707
RYF VQD K +GELFGI N+F+ + D T +II+
Sbjct: 625 AVRYFHAVQDDKRNRGELFGIENMFKLCTGDRCLTEDIIK 664
>gi|426193715|gb|EKV43648.1| hypothetical protein AGABI2DRAFT_76351 [Agaricus bisporus var.
bisporus H97]
Length = 750
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 256/713 (35%), Positives = 355/713 (49%), Gaps = 122/713 (17%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
EPLVL E +VPASIN L ++QREGV F + Y+ GG+LGDDM I
Sbjct: 28 EPLVLD---EKTKTEVPASINTYLRDYQREGVTFFWNQYQAGRGGLLGDDM-------VI 77
Query: 174 AFLAAVFGKDESSDSTILKDNKV----------------------DKKGYVLIICPSSVI 211
+FL+A+ K S T KD + D LII P++V+
Sbjct: 78 SFLSAIMRK---SGVTTDKDRRRKHISNLQDLDAWRERRHLPPANDTWPTCLIIAPTTVV 134
Query: 212 QNWEIEFSRWSTFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWE 269
NWE E W F V +Y+G R+ +L + ++++ITSFD R +L + W+
Sbjct: 135 HNWERELETWGYFEVGLYNGSRKEREPVLRDFKMGRLDIVITSFDIARKDIDLLDTLAWD 194
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
V VDE HR+KN SKL +A + R GLTGT +QN E++ + DW PG LGT
Sbjct: 195 CVFVDEVHRVKNVWSKLTLALHQFACSRRFGLTGTTIQNSYQEMWTILDWTNPGRLGTSR 254
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQ-HLVAVLRK------YLLRRTKEETIGHL 382
++++ +PL GQ A E +ER Q +VAV+ K + LRRTK I +
Sbjct: 255 QWQKYVVKPLTAGQSAAATE------EERAQAQMVAVILKTKLLPEFFLRRTKN-IIKNQ 307
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDG 442
+ K D VVFC +S Q AY+RLL + +Q L L D
Sbjct: 308 LPNKSDQVVFCPLSQKQAIAYKRLLGMEAVQNLT-------------------LLPEFDR 348
Query: 443 CDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQ 502
+C+ P D P++ ++ LA F PD GNA
Sbjct: 349 -----WCI-------------------SGPNDSPEQTARNRALADIAF-PD-----GNAP 378
Query: 503 NESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
+ + CGK LE L+ W +KIL+F+ SV++LD+L+ L +GY F +
Sbjct: 379 KYG-TAMMRPQYCGKWATLEVLLREWRKDPSNKILVFTKSVKLLDMLDFHLKTQGYGFVK 437
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
LDGST + R SL+D F+ P VFLIST AGG GLNL AN+VVIFDP A DLQA
Sbjct: 438 LDGSTKQSDRMSLIDKFHCDPKIFVFLISTLAGGTGLNLTGANKVVIFDP----AHDLQA 493
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKE 681
DR+FRFGQ R V V+RLL AGS+EEL+Y RQ+YKQQ I + ++ RYFEG+Q
Sbjct: 494 MDRAFRFGQTRDVSVYRLLGAGSVEELIYARQLYKQQQMEIGYNASIQTRYFEGIQGDNS 553
Query: 682 FQGELFGICNLFRDLSDNLFTSEIIE---------SHEEQGQQQERHHCTNQGFKGLETH 732
+GELFGI N+F+ L T IE + G + R T + +E
Sbjct: 554 KKGELFGIENIFKYHESALATKMAIEKANLAELDWALANMGNNRSRK--TKATAELVEAD 611
Query: 733 IVSSKDSNTLLSTGSKTRKSSDPEMARTS-----KPLLEDMGIVYAHRNDDIV 780
SK+ +TL G+ P+++ + + +L +G+ Y+H ND+I+
Sbjct: 612 AGISKEDSTLKGLGALLFDDEAPKLSTLNEEDSIQAILNTIGVKYSHLNDEIL 664
>gi|299741193|ref|XP_001834290.2| hypothetical protein CC1G_11203 [Coprinopsis cinerea okayama7#130]
gi|298404599|gb|EAU87531.2| hypothetical protein CC1G_11203 [Coprinopsis cinerea okayama7#130]
Length = 1028
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 253/702 (36%), Positives = 346/702 (49%), Gaps = 121/702 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
IQVP +IN L E+QREGV+F + +YK GG+LGDDMGLGKTIQ I+FL+A+ K S
Sbjct: 235 IQVPGAINTYLREYQREGVQFFWDMYKQGRGGLLGDDMGLGKTIQVISFLSAIMKKTGSQ 294
Query: 187 DS--------TILKDNKVDKKG-----------YVLIICPSSVIQNWEIEFSRWSTFNVS 227
D + L+D ++ KK LII PS+V+QNW EF W F V
Sbjct: 295 DDRNRRRKHVSRLQDGEMWKKHRKLPKANEKWPTCLIIAPSTVVQNWLREFETWGYFEVG 354
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
Y G ++ EA + + D R L ++W VIVDE HR+KNE + +
Sbjct: 355 SYAGDSKPA---DREAIRHDFKLGRLDVPRKDIEYLDTLDWSCVIVDEVHRVKNEDAAVT 411
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A + R GLTGT +QN EL+ + DW PG +GT + + E+ +PL GQ TA
Sbjct: 412 QALHQFACPIRFGLTGTAIQNSYKELWTILDWTNPGRIGTVKEWNEYVAKPLTEGQSTTA 471
Query: 348 PERFIRIADERKQHLVAV-------LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
A+ RK+ L+ L +Y LRRTK + I H + K D VVFC +S Q
Sbjct: 472 S------AETRKKALIVAKILKQKFLPQYFLRRTK-DIISHQLPKKTDQVVFCPLSKFQS 524
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL--VLPCLVKL 458
Y+++L+ ++Q L+ ++ CSCGS + CC PF V + L
Sbjct: 525 SVYKKILKSRDVQNLLRREEECSCGSKKKRKNCCH-----------PFVAANVFKYMSIL 573
Query: 459 QQISNHLELIKP-NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
++SNHL LI P +PRD ++Q ++ ELA F PD GN + + D + CGK
Sbjct: 574 IKLSNHLGLILPGSPRDSAEQQERNRELAQLAF-PD-----GNVPMYGKV-IIDPRYCGK 626
Query: 518 MRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
+AL L+ W A +K+L+F+ SVR+L++LE L + Y F +LDGST +QS
Sbjct: 627 WQALNILLKQWRADPTNKVLIFTKSVRLLEMLEYHLQTQNYGFCKLDGST----KQSE-- 680
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
+PA DLQA DRS+RFGQ R V V
Sbjct: 681 -------------------------------------HPAHDLQAMDRSYRFGQTRDVSV 703
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
+RLL AGS+EEL+Y RQ+YKQQL I ++ RYF+GVQ +GELFG+ N+F+
Sbjct: 704 YRLLGAGSVEELIYARQIYKQQLMAIGYEASVQTRYFQGVQGDVTKRGELFGLENIFKLH 763
Query: 697 SDNLFTSEIIESHEEQ----------GQQQERHHCTNQGFKGLETHIVSSKDSNT----- 741
D L T IE G+ + R T E V DS+
Sbjct: 764 EDKLATKMAIEKANLAEFNWAMANLGGKSKSRKSKTGDELLA-EVQGVKISDSDKDLQGL 822
Query: 742 ---LLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIV 780
L S + T S D E K L +G+ Y H ND I+
Sbjct: 823 GALLFSDDAPTALSEDSEQNAIQKA-LSTIGVSYIHHNDHIL 863
>gi|353239380|emb|CCA71294.1| related to RAD26-DNA repair and recombination protein
[Piriformospora indica DSM 11827]
Length = 794
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 243/736 (33%), Positives = 362/736 (49%), Gaps = 120/736 (16%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV------- 179
I+VP SIN L +QR+G++F+Y+ Y+ + GGILGDDMGLGKT+Q I+FL+A+
Sbjct: 54 IRVPDSINYCLRSYQRDGIRFMYQRYRQRMGGILGDDMGLGKTVQVISFLSAIMKKTGKR 113
Query: 180 ----------------------FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIE 217
G+D+S D + N D+ L++ PSS+I NW+ E
Sbjct: 114 TDLDRRCQHINRLFDEGKRLRRLGEDQSVDEHLPPPN--DRWPTCLLVVPSSLISNWKNE 171
Query: 218 FSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRI-HGSILSEVNWEIVIVDEA 276
W F ++Y G R ++ + +++++ S + R G L ++ W + I DE
Sbjct: 172 LETWGYFEFAVYQGDRRSEVVRQFRMGRLDIVLVSLEILRSPAGDALFDLGWSLTICDEV 231
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKN + A +++ RIGLTGT +QN EL+ L +W PG LGT++ +
Sbjct: 232 HRLKNCNRESLKAASQIECDVRIGLTGTALQNNYEELWTLLNWANPGKLGTKQQWNHSIS 291
Query: 337 EPLKHGQRLTA-PERFIR---IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
LK GQ A PE+ R +A K+ L+ + Y LRR K+E I + K + + F
Sbjct: 292 SVLKDGQSSNATPEQTARRDAVAKGVKEKLLPM---YFLRRDKQE-IADQLPRKTETIAF 347
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF--CL 450
C ++ +QK YRRLL+ ++Q ++ + C CGS T CC CP +
Sbjct: 348 CPLTQMQKAVYRRLLESEDMQRILRAEDSCECGSGKTCGACC-----------CPVDKGM 396
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
+L + +ISN L LI P D PD + +L + P + AQ + +
Sbjct: 397 ILSYISTFIKISNSLFLIVPVLGDSPDALVVNRKLTETLI-PGV----APAQLQHAMWCE 451
Query: 511 DVKSCGKMRALEKLMYSW------------------ASKGDKILLFSYSVRMLDILEKFL 552
CGK + L L+ W + K K+L+F+ S ++LD + L
Sbjct: 452 PENYCGKWKVLVGLLNDWHTENEAFQIQEGQKSVVTSQKRHKVLVFTKSRKLLDFIVSSL 511
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
Y+ + G RQ +D F + P+ V +I+T G +GLNL +AN+V+IFDP+
Sbjct: 512 ASLAYTTEVISGEVVQEDRQRAIDSFQTDPNVFVMVITTSTGSVGLNLTAANKVIIFDPD 571
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP D+QA DR++R GQ R V V RL+S+GSLEEL+Y RQ+YK Q+ K + RY
Sbjct: 572 WNPTVDMQAMDRAYRLGQTRDVEVVRLISSGSLEELIYQRQIYKMQMMMTIYDAKPQTRY 631
Query: 673 FEGVQDCKEFQGELFGICNLFR------------------------------------DL 696
FEGVQ KE +GELFG+ NLF DL
Sbjct: 632 FEGVQGDKEKEGELFGVRNLFTLTEGNTEMRIEEARYRDEVWLNMAALEKRLHGSKGIDL 691
Query: 697 SDNL---FTSEII---ESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTR 750
+L FT + E+H ++ ++Q R H G E + S K S +L + + R
Sbjct: 692 KKSLIDDFTEGAVKKAENHMKKIEKQLRKHGVASMVSGQEVAMDSEKWS--ILQSRKRGR 749
Query: 751 KSSDPEMARTSKPLLE 766
KSS + A+TS P +E
Sbjct: 750 KSSADKKAQTSTPSIE 765
>gi|393235406|gb|EJD42961.1| hypothetical protein AURDEDRAFT_167909 [Auricularia delicata
TFB-10046 SS5]
Length = 1015
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 323/616 (52%), Gaps = 51/616 (8%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+PA IN L +QR+G +F K Y GGIL DDMGLGKTIQ I+FL A+ K
Sbjct: 230 LPAHINRFLRPYQRQGAEFFAKRYSAGRGGILADDMGLGKTIQVISFLCAIMQKHNDRRD 289
Query: 189 TILKDNKVDKKGY---------------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN 233
++ V ++ Y LI P++++ NWE E W F +Y G
Sbjct: 290 IGRREKFVAERPYSDARIDVEAITKWPTALIAAPATLVGNWERELETWGHFEFGVYTGNE 349
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
R IL K + +++L+TS D+ + L ++ + + +DE H K+ +SK++
Sbjct: 350 RRAILRKFQLGKLDILLTSVDTMKRDIDDLKDLPFACIFIDECHSAKSPQSKMFETLHSF 409
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R G+TGT +QN EL+ + D+ PG +GT + +R+ PL+ GQ A + +
Sbjct: 410 ACTVRFGMTGTAVQNSYEELWCILDFAVPGQVGTLDAWRKCIANPLRAGQAHDADRKAVN 469
Query: 354 IADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKE-DNVVFCTMSDLQKRAYRRLLQLPE 411
+ L + +L + LRR K + L + K+ D VVFC + + Q+R Y+ L
Sbjct: 470 TGRAVARALYSKLLPLHFLRREKHDPRIELALPKKTDRVVFCPLLEPQRRVYQAFLSQEA 529
Query: 412 IQCLINKDLPCSC----GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
+ ++ KD C C L + +CC + + +L + + ++SNH L
Sbjct: 530 VVNMVRKDEICECYDGQAKKLKRKDCCYPFEKAE---------MLRYMDIILKVSNHPIL 580
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS----CGKMRALEK 523
I P P P++ ++ L++ +G N + +DV CGK + L
Sbjct: 581 IMPGPNMTPEQNLRNQALSAIAWG-----------NGPRLKYADVAYSTNFCGKWKVLLA 629
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILE---KFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+ W K +K+L+F+ SV++LD ++ K K SF RLDG T + R ++VD FN
Sbjct: 630 LLCDWRKDKTNKVLIFTRSVQLLDFIDYNLKSCRWKDISFERLDGGTKQSERMTIVDRFN 689
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
P FLISTRAGG GLNL SAN+VVIFDPNWNPA D+QA DR++RFGQ+R V VFRL
Sbjct: 690 LDPDIFAFLISTRAGGTGLNLTSANKVVIFDPNWNPAHDMQAMDRAYRFGQQRDVDVFRL 749
Query: 640 LSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLS-- 697
LS G+LEE +Y RQVYK Q S R F+GVQ KE QGELFG+ N+FR S
Sbjct: 750 LSEGTLEENIYQRQVYKGQQSERIYKNAEPTRMFDGVQFDKEKQGELFGLKNIFRLKSKD 809
Query: 698 DNLFTSEIIESHEEQG 713
D T IE E +G
Sbjct: 810 DETRTQLRIERAELEG 825
>gi|298705620|emb|CBJ28871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1406
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 240/673 (35%), Positives = 347/673 (51%), Gaps = 92/673 (13%)
Query: 112 PFE-----PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG---ILGDD 163
PFE PLVL+ + +VPAS N L +QREGV+F+Y+ ++ G IL DD
Sbjct: 255 PFEDPGKRPLVLTNEAGGERAEVPASANRYLQGYQREGVEFMYRRVRHTDGPKGVILADD 314
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYV-------LIICPSSVIQNWEI 216
MGLGKT+QTIA L A+ K + + + D KG+V LI+CP SV+ NW
Sbjct: 315 MGLGKTVQTIALLLALLKKTGTRRDRMDIKRRKDCKGHVSVAGKPVLIVCPRSVLPNWTG 374
Query: 217 EFSRWSTFNVSIY------HGPNRDMILE-KLEACGVEVLITSFDSYRIHGSILSEVNWE 269
W F + GP +E +L+A +EV++ + LSE +W
Sbjct: 375 HLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSIETLSEFDWL 434
Query: 270 IVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
+ DE H KN + A +L IGLTGT++QN + E ++L + V PG +G +
Sbjct: 435 TAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQ 494
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
+ F+ + EP+ G++ A + + ER + K +LRR K+ +G L+ GK
Sbjct: 495 DDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKD-ILGDLLKGKIG 553
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV-ECC------------- 434
VVFC ++ +QK YR +L LPE + L N PC CG P + CC
Sbjct: 554 TVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLV 613
Query: 435 -------KRLD-NLDGCD---SCPFCLVLPCLVKLQQISNHLELIKPNP----RDEPDKQ 479
+R +L+ C CP+C + KLQ+++NH L++ P + K
Sbjct: 614 DPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKM 673
Query: 480 RKDAELASAVFGPDIDLV--------GGN--------------------------AQNES 505
D A+ F + ++ GG A+ E+
Sbjct: 674 LDDIAFANVAFSEEARVIMADLPGQHGGGAVSGSSIGAGRGGGGRGGGGEWDRRLARPEN 733
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
F+ L +CGKMR L+ L+ + +K K+LLFSYS MLDIL+ +GY+F +LDG+
Sbjct: 734 FLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGN 792
Query: 566 TPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
T + RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+D
Sbjct: 793 TAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAED 852
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK--RYFEGVQDCKE 681
R++R GQ + V VFRL+S G++EEL Y RQ+YK Q S + K E R FEGVQ +E
Sbjct: 853 RAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGGLRQFEGVQGVRE 912
Query: 682 FQGELFGICNLFR 694
QGEL+GI NL +
Sbjct: 913 EQGELWGISNLMK 925
>gi|392587352|gb|EIW76686.1| hypothetical protein CONPUDRAFT_63659 [Coniophora puteana
RWD-64-598 SS2]
Length = 779
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 307/592 (51%), Gaps = 77/592 (13%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VPA+IN L ++QREGV F ++ YK GG+LGDDMGLG V + D
Sbjct: 82 VPAAINTHLRDYQREGVTFFWERYKEGRGGLLGDDMGLGDKRDIDRRRNHVSKLQDKPDW 141
Query: 189 TILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEAC 244
T + + + LI+ PSSV+ NWE E W F V +Y G R+ +L + +
Sbjct: 142 TKHGTLPLANETWPTCLIVAPSSVVPNWEREIHTWGYFEVGVYGGQPTEREEVLSEFKKG 201
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
++V+ITSFD R + L E+ W +IVDE HR KN SK A + + R GLTGT
Sbjct: 202 RLDVVITSFDMARRNIDKLEELAWSTIIVDEVHRFKNPSSKGTEAFNQFLCKCRFGLTGT 261
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV- 363
+QN EL+ + DW PG LGT ++ + +PL GQ A E +ER + LV
Sbjct: 262 AIQNSYNELWTILDWTNPGQLGTLRQWKGYVVQPLTIGQSSKASE------EERTKALVV 315
Query: 364 -AVLRKYLL-----RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
VLR LL RRTK+ I + K D VVFC ++ +Q Y+R+L +IQ L N
Sbjct: 316 ATVLRDKLLPRFFKRRTKD-IIKSQLPTKTDEVVFCPLTPIQITVYKRMLASDDIQRLFN 374
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK-PNPRDEP 476
KD C+CGS KR + EL++ P + P
Sbjct: 375 KDSYCTCGSKKKYAYQTKR---------------------------NRELVQIAFPDETP 407
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKI 535
K +A+ P + CGK L+ L+ W + +K+
Sbjct: 408 PK------FGTAMLQPQL--------------------CGKWLVLDVLLKDWHEEPSNKV 441
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
L+F+ SV++LD+LE L + F +LDGST R ++D FN P +FLIST AGG
Sbjct: 442 LIFTKSVKLLDMLEFHLRANNFGFCKLDGSTKQPDRMPMIDKFNQDPDIYIFLISTLAGG 501
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
GLNL AN+VVIFDP A DLQA DR++RFGQ R V V+RLL AGS+EEL+Y RQ+Y
Sbjct: 502 TGLNLTGANKVVIFDP----AHDLQAMDRAYRFGQTRDVSVYRLLGAGSIEELIYARQLY 557
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE 707
KQQ I + ++ RYF+G+Q QGELFGI N+FR D L T IE
Sbjct: 558 KQQQMAIGYTASVQTRYFQGIQGDASRQGELFGIKNIFRLHEDTLATKMAIE 609
>gi|315051734|ref|XP_003175241.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma
gypseum CBS 118893]
gi|311340556|gb|EFQ99758.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma
gypseum CBS 118893]
Length = 945
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 267/806 (33%), Positives = 395/806 (49%), Gaps = 104/806 (12%)
Query: 109 HTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGK 168
H+ +E + L Y + +PA I L ++Q EGV FL++L+ + GGILGDDMGLGK
Sbjct: 189 HSRKYEDIQLP----YSLGLIPAPIAQWLRDYQVEGVSFLHELFVYQKGGILGDDMGLGK 244
Query: 169 TIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS 227
T+Q IAFL A +GK + D+ ++ + ++ YV S NW +
Sbjct: 245 TVQVIAFLTAAYGKTGDERDAKRMRKMRRKRENYV-----ESSDVNW-MNLIDGVGGMWD 298
Query: 228 IYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
+YHG ++D L+ + KS+
Sbjct: 299 VYHGESKDAALKSA--------------------------------------SDRKSETA 320
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A EL RIGLTGT +QNK EL+ L +W PG G ++ EPLK GQ A
Sbjct: 321 KAMNELNALCRIGLTGTAIQNKYEELWTLLNWTNPGQFGPISTWKSTICEPLKVGQSHDA 380
Query: 348 PERFIRIADERKQHLVA-VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ A + + LV +L + LRR K I + K D VVFC +++ Q AY
Sbjct: 381 TIYQLSRARKTARKLVKNLLPAFFLRRMKS-LIADQLPKKSDRVVFCPLTETQSDAYENF 439
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L I + N CSCGS CC+ G V P + LQ+ISNHL
Sbjct: 440 LNSDIIDYIKNSSDYCSCGSGKKAGWCCRMFLPQGGKWQS---YVFPAISNLQKISNHLA 496
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
++ P P D DKQ KD E+ PD +L S I S+ + CGK + L+KL
Sbjct: 497 ILIPQPMDPKDKQAKDLEMLQVAV-PDQWRELYRTRG---SIINYSNPEFCGKWKVLKKL 552
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ W + GDK+L+FS++VR+L +L+ Y+ S LDGS R ++V+ FNS P +
Sbjct: 553 LKWWHANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNVVNAFNSDPRQ 612
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFLIST+AGG+GLN+ SAN+VV+ DPNWNPA DLQAQDR++R GQ R V VFRL+SAG+
Sbjct: 613 FVFLISTKAGGVGLNITSANKVVVVDPNWNPAYDLQAQDRAYRIGQLRDVEVFRLVSAGT 672
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+EE+VY RQ+YKQQ +NI + E+RYF GVQ+ K+ +GE+FG+ NLF ++N+ +
Sbjct: 673 IEEIVYARQIYKQQQANIGYNASTERRYFRGVQEKKDQKGEIFGLANLFEYQNNNVVLRD 732
Query: 705 II----------------------ESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTL 742
I+ +SH ++ ++ H + E ++ L
Sbjct: 733 IVNKTNIAESKAGVQVIDFEMEGGKSHSNDDREDDKPHSSTPD----ENDDLAMSQLAAL 788
Query: 743 L---STGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNK---QPGFQRKKE----- 791
+ G +++K + + +L G+ Y H N ++V + R+ E
Sbjct: 789 VRGEGIGEESKKLAPTLKHDPIQAILAGAGVEYTHENTEVVGSSKVEAQLSRRAELVNDG 848
Query: 792 ESIPQDLSSRPPPIHSKRRNLLDCADGKESLASSKDRKNIEY------SLLARFMGMDVF 845
E I ++ RP K ++L +S A+ K E S+ AR+ DV
Sbjct: 849 EEIGEEQVFRPESREGKPSSILVRGKNGQS-ATFKYHPPPEVMKRQFCSMAARYGFRDVT 907
Query: 846 EFSKWILSATPSAREKLLQDYRKRKK 871
EF+ + TP+ R L+++ K ++
Sbjct: 908 EFALTVEGLTPAQRRTWLENWYKERR 933
>gi|301769905|ref|XP_002920371.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Ailuropoda melanoleuca]
Length = 802
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 315/557 (56%), Gaps = 33/557 (5%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+S +FDDE+ EK ++ +F + PL S+DG+ +P +IN L
Sbjct: 267 RSFIFDDEDLEKPYFPDR---------KFPSSAVAFPL--SEDGD----SIPYTINRYLR 311
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------IL 191
++QREG +FLY + G ILGDDMGLGKT+Q I+FLAAV K + + +L
Sbjct: 312 DYQREGAQFLYAHFIQGKGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLL 371
Query: 192 KDNKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGV 246
+ K + K LI+ P SV+ NW E W F V+I HG +D L +++
Sbjct: 372 RSMKKEPPCSIAKKMFLIVAPLSVLYNWRDELDTWGYFRVTILHGNKKDNELIRVKQRKC 431
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
E+ +T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+
Sbjct: 432 EIALTTYETLRLCLEELNSLEWSAVIVDEAHRIKNPKARITEVMKALKCNVRIGLTGTIL 491
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + Q L +
Sbjct: 492 QNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKM 551
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PCSC S
Sbjct: 552 SGWFLRRTK-TLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKDVTLILQSSEPCSCSS 610
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
+ CC + ++ L L LQ+++NH+ L++ + ++ +
Sbjct: 611 GRKRRNCCYKTNSHGETVK---TLYFSYLAVLQKVANHVALLQ-SASTSKHQETLIKRIC 666
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF D V +++ +F LSD K GKM+ L++L+ DKILLFS+S ++LD
Sbjct: 667 DQVFSKFPDFV-QKSKDSAFETLSDPKYSGKMKVLQQLLNHCRKNKDKILLFSFSTKLLD 725
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
+L+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN V
Sbjct: 726 VLQQYCMAAGLDYRRLDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVV 785
Query: 607 VIFDPNWNPAQDLQAQD 623
V+FDP WNPA DLQA D
Sbjct: 786 VLFDPTWNPANDLQAID 802
>gi|328854066|gb|EGG03201.1| hypothetical protein MELLADRAFT_90365 [Melampsora larici-populina
98AG31]
Length = 863
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 221/619 (35%), Positives = 318/619 (51%), Gaps = 76/619 (12%)
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
A+IN L +QR+GV FL Y+ ++G IL DDMGLGKTIQ I+FLA + K +
Sbjct: 253 ANINRFLRSYQRDGVNFLLSHYQARNGAILADDMGLGKTIQVISFLAVIMAKTGNVQDVG 312
Query: 191 LKDNKVD--KKGY--------VLIICPSSVIQNW--EIEFSRWSTFNVSIYHGPNRDMIL 238
+ KV+ KK Y L+ICP+SVI NW E+E + + H L
Sbjct: 313 RRRQKVNASKKSYRPSALGPTCLVICPNSVIDNWARELETVGILSSTTDVAH------TL 366
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ +A ++LI+ F+ + ++++ +VIVDEA RLKN + Y AC KT R
Sbjct: 367 RRFKAGAYDILISGFNCATRMIDEIYDLDFSVVIVDEAQRLKNPTTATYRACQRFKTNVR 426
Query: 299 IGLT----------------GTIMQNKIM--------------------ELYNLFDWVAP 322
GLT TI++ + EL+ LFDW P
Sbjct: 427 FGLTVRSDYFVQRGFTVLLCKTILREYTISNLEEFQHAQSDFLVHTTSSELHTLFDWARP 486
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL-LRRTKEETIGH 381
+LGT ++ F +P+ H ++ A I++ R LV L LRRTK E I H
Sbjct: 487 FALGTYHMWKAFVSDPILHSRKANASRSEIKLGKARALALVNNCWPDLQLRRTKAE-ILH 545
Query: 382 LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG------SPLTQVECCK 435
+ K D +V C M+ Q+ AY+ LL ++ ++ PC CG PL + +CC
Sbjct: 546 ELPSKSDRIVLCPMTASQRTAYKNLLASDDVVNMMKHTEPCPCGRKNTKRQPLPRGKCCD 605
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
+ G F + C+ +I+NHL L+ PN D +K +D E +F D
Sbjct: 606 Q-----GWSKRIFQNLTVCM----KIANHLALLYPNKEDRTEKYDQDREFIKKLFPGD-- 654
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
+ + +D + CGK L+ L+ W +G K+L+FS +M+DIL +L +
Sbjct: 655 ---WTHRKHHYSADADTELCGKWLVLKPLLQQWKKEGAKVLIFSQWTKMMDILSYWLEQD 711
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
F RLDG P+ R + VD+F P K +FL ST AGG+GLNL +AN+VVIFDP+WNP
Sbjct: 712 FPGFVRLDGKVPTAERMARVDEFQRDPDKFIFLASTLAGGVGLNLTAANKVVIFDPSWNP 771
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ D QA DR R GQKR V RL++ G+ EEL+Y RQVYK L+ +A + + R F G
Sbjct: 772 SSDAQAMDRVCRIGQKRSVECLRLIALGTAEELIYHRQVYKTHLAEVANTARQPARKFIG 831
Query: 676 VQDCKEFQGELFGICNLFR 694
VQ K+ QG ++G+ N+FR
Sbjct: 832 VQGDKKDQGNMWGVKNIFR 850
>gi|119613043|gb|EAW92637.1| RAD26L hypothetical protein, isoform CRA_c [Homo sapiens]
Length = 672
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 203/557 (36%), Positives = 313/557 (56%), Gaps = 35/557 (6%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF + LS +G+ +P +IN L ++
Sbjct: 83 IFDDEDLEKPYFPNRKFPSSSVA------------FKLSDNGD----SIPYTINRYLRDY 126
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 127 QREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRS 186
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V++ HG +D L +++ E+
Sbjct: 187 MKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCEI 246
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 247 ALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQN 306
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LG+ +F++ + +P++HGQR TA +R + + Q L +
Sbjct: 307 NMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSG 366
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 367 WFLRRTK-TLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQ 425
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ CC + ++ L L L LQ+++NH+ L++ + ++ +
Sbjct: 426 KRRNCCYKTNSHGETVK---TLYLSYLTVLQKVANHVALLQAASTSK-QQETLIKRICDQ 481
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L
Sbjct: 482 VFSRFPDFV-QKSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVL 540
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+
Sbjct: 541 QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVL 600
Query: 609 FDPNWNPAQDLQAQDRS 625
FDP WNPA DLQA DR+
Sbjct: 601 FDPTWNPANDLQAIDRT 617
>gi|167517741|ref|XP_001743211.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778310|gb|EDQ91925.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 325/586 (55%), Gaps = 16/586 (2%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYK-LYKNKHGG-ILGDDMGLGKTIQTIAFLAAVFGKD 183
+ QVP+ IN L +QREGV+ + + L++ + G +L DDMGLGKT+Q +A +AA+ GK
Sbjct: 116 VCQVPSRINAFLRPYQREGVQAMARALFRTQRTGFVLADDMGLGKTVQVLALVAAILGKT 175
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEA 243
+T L+ +G +LIICP+SV+ NWE E +W+ F++ ++ G R +L +
Sbjct: 176 -GDPATDLQLAAAVPRGSILIICPTSVLYNWEQEAHQWAYFSLGLFQGARRAQLLPDILR 234
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
EV++ + DS + ++L E NW +V+VDE H LKN+K++ Y A + R R+GL+G
Sbjct: 235 GRYEVVLANLDSIKTEPALL-EHNWLLVVVDECHALKNDKTERYRALARMTCRRRLGLSG 293
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T+ QN E + +F+WV G+ F+ + P+ R A+ HL
Sbjct: 294 TVFQNNFREFWAIFNWVLAGAWIPWPRFKREFQGPIVSAAAARRTAEQQRAAEAALLHLA 353
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL-PC 422
L+R K L + K++ VVFC ++ Q Y+R L+ ++ L+ PC
Sbjct: 354 QCTADVTLKRYKSLLSSQLPV-KQEKVVFCKLTPFQMAGYQRFLRSDYVEALLQATHNPC 412
Query: 423 S-CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
CG+ ECC ++ GC S L+ P + L+Q+SNH L+ P D+ +
Sbjct: 413 RRCGASKRGSECCYQVGT-KGCASV-IHLMFPVISVLRQLSNHPALLLPRADDD---EVV 467
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
AEL+ VF P+ + +N+ D CGK+ L +L+ W + +++FSY+
Sbjct: 468 RAELSEKVFEPEDPWMQSMLRNQ-LTSAGDTSVCGKLAILMQLLARWEKEQLSVVIFSYT 526
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLV 601
R+L+I++ L +G + R+DG + R ++V F + +++ L+ST AGG G+NL
Sbjct: 527 TRLLNIIQDALSLQGRTPLRIDGQVSARDRHAVVAKFQAR-DERILLVSTHAGGEGINLQ 585
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A++VVI DP WNPA+DLQAQDR++R G + V V RL++AG+LEELVY RQVYK QL+
Sbjct: 586 AASKVVIVDPCWNPARDLQAQDRAYRLGTEHDVEVLRLVTAGTLEELVYARQVYKLQLAR 645
Query: 662 IAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE 707
+ +G+ R V E GELFG+ N+ D I+E
Sbjct: 646 MVQTGRTTARAVFDVAMPGE--GELFGLENMLAPPVDGSLLEHILE 689
>gi|224004522|ref|XP_002295912.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335]
gi|209585944|gb|ACI64629.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335]
Length = 841
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 315/602 (52%), Gaps = 45/602 (7%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+PASIN L +QR G +F+Y G +LGDDMGLGKT+Q I+ +AA+ K + +
Sbjct: 1 IPASINRYLQGYQRVGSQFMYSSVIRGVGCVLGDDMGLGKTVQVISLVAALLEKTGTGED 60
Query: 189 T-----------ILKDNKVD--------KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY 229
+ K + VD +LI+ PSSVI FNV +Y
Sbjct: 61 IERMIREMLMGGVQKKDVVDPLDGITVPNFAPILIVVPSSVI-------DVRGYFNVGVY 113
Query: 230 HGPNRDMILEKLEACGVEVLIT--SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
G NR+ ++ + +LIT S + S + + W++VI+DE H KN KS +
Sbjct: 114 RGGNREKAIDDVREGNNFILITGKSLFTRESDYSYFAGIKWKLVIIDEFHEYKNHKSNAF 173
Query: 288 MACLELKTRNR------IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
CLE R+ IGLTGT+MQN EL+ L D V PG L R+ F + +P+
Sbjct: 174 -KCLE-GVRDSEPFPPLIGLTGTLMQNNHDELFTLIDLVRPGILEDRKSFMDGTSKPIMR 231
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
+ A + + +R+ L L L R K+ + + K++ V+FC +S++QK+
Sbjct: 232 ARAKGASGETLSLGKQREAELKKALENVYLERRKDVVLKDTLTEKDEKVIFCELSEVQKK 291
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD---GCDSCPFCLVLPCLVKL 458
YRR++ LP+ L + PC CG +L C C KL
Sbjct: 292 LYRRIISLPDYYMLSTANAPCDCGVNQAYFRGYSKLKTQQEKINYQVTELCNEFVCCYKL 351
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI--DLVGGNAQNESFIGLSDVKSCG 516
++ +H L++ + + K E A A F P+I ++ G + I + G
Sbjct: 352 YKVCSHASLLQVDKSLSDSEIHKKLEFAKAAFTPEILREMPGQSYYKSDGIMNDHLNLSG 411
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
KM+ L+ + + K ++L+FSYS LD++++ + +G++ RLDG T ++ RQ+LVD
Sbjct: 412 KMKTLDYCLRKYQKKRHRVLVFSYSTATLDLIQQHVKTQGWTHLRLDGQTATSTRQALVD 471
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
F + VFLISTRAGGLGLNL +AN+V+IFD NWNP+ D QAQDRSFR GQ+++V V
Sbjct: 472 QFQRDQAIFVFLISTRAGGLGLNLTAANKVIIFDVNWNPSYDEQAQDRSFRIGQEKNVEV 531
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVS----GKLEKRYFEGVQDCKEFQGELFGICNL 692
RL++ G++EE +Y RQVYK QL + GK + + F GV K +GELFG+ NL
Sbjct: 532 LRLVARGTIEEQMYARQVYKTQLKKQTLGFNDDGKNQPQSFRGVDRDKHRKGELFGLENL 591
Query: 693 FR 694
+
Sbjct: 592 LK 593
>gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Saccoglossus
kowalevskii]
Length = 1503
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 333/612 (54%), Gaps = 74/612 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+++P + C+L ++Q+ GVK+L++L+ + GGI+GD+MGLGKTIQ I+FL+ + + K +
Sbjct: 523 LKIPGQVWCKLYKYQKTGVKWLWELHCQQTGGIVGDEMGLGKTIQIISFLSGLKYSKLQ- 581
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMIL 238
+K +K G VLI+CP++V+ W EF W F V+I+H G ++
Sbjct: 582 -----IKGDKYIGLGPVLIVCPTTVMHQWVREFHTWYPDFRVAIFHDSGSYSGSKASLVY 636
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ +++ GV L+TS+ + RI +L W+ VI+DE H+++N + + AC + +T +R
Sbjct: 637 DIVKSRGV--LVTSYAAVRIQQDMLLRYQWDYVILDEGHKIRNPDADVTQACKQFRTPHR 694
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I L+G+ MQN + EL++LFD+V PG LGT F + + P+ G A + ++ A +
Sbjct: 695 IILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMQEFSVPITMGGYSNASDVQVQTAYKC 754
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L + YLLRR K++ +L + K + V+FC ++ Q Y+ + E ++
Sbjct: 755 ACVLRDTINPYLLRRMKQDVKVNLNLPDKNEQVLFCRLTPEQVDVYKEYIDSGECHAILT 814
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
G L+ L++I NH ++ PR
Sbjct: 815 GRYKVFAG-----------------------------LITLRKICNHPDISTGGPR---- 841
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ + D D+ E G K GK+ +E L+ W +G ++LL
Sbjct: 842 -------VLKGDYEHDDDI-----PEEMRYGY--WKKSGKLIVIESLLKLWKKQGHRVLL 887
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
F+ S +MLDIL+ F+ +GY++ R+DGSTP + RQ V+ FN S VFL++TR GGLG
Sbjct: 888 FTQSKQMLDILDSFVTSRGYNYMRMDGSTPISSRQPAVNRFNQDKSVFVFLLTTRVGGLG 947
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL+ A+RVVI+DP+WNP+ D+QA++R++R GQ + V ++RLL++G++EE +Y RQ++KQ
Sbjct: 948 VNLIGADRVVIYDPDWNPSTDMQARERAWRIGQNKQVTIYRLLTSGTIEEKIYHRQIFKQ 1007
Query: 658 QLSNIAVSGKLEKRYFE----------GVQDCKEFQGELFGICNLFRDLSDNLFTSEIIE 707
L+N + ++R+F+ QD K+ D++ NL S+I
Sbjct: 1008 FLTNRVLKDPKQRRFFKTNDLHELFTLTSQDTKQGTETHAIFAGTGSDITINLKKSKIRR 1067
Query: 708 SHEEQGQQQERH 719
SH Q +ER+
Sbjct: 1068 SHSNQQLCEERN 1079
>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
Length = 1410
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 304/555 (54%), Gaps = 65/555 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++VP+ I +L +QR GV +L++L+ GGI+GD+MGLGKTIQ IAFLAA+ +S
Sbjct: 433 LKVPSRIWSKLFNYQRVGVSWLWELHCQSAGGIIGDEMGLGKTIQMIAFLAALRQSKLAS 492
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILE 239
K K G V+I+ P++V+ W EF +W F V+I H G D+I
Sbjct: 493 -----KHFKYCGLGPVIIVTPTTVMSQWVKEFHKWWPLFRVAILHSSGSFTGAEEDLIWS 547
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ GV LITSF + +H + +W V++DE H+++N +++ AC + +T +RI
Sbjct: 548 IVKDRGV--LITSFTTLVVHQDKVLPYDWHYVVLDEGHKIRNPDAQVTQACKQFRTPHRI 605
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+G+ +QN + EL++LFD+V PG LGT F + + P+ G A E ++ A +
Sbjct: 606 ILSGSPIQNNLKELWSLFDFVFPGKLGTLPDFLQHFSIPIVQGGYANATEIQVQTAYKCA 665
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + + + K + V+FC ++D Q+ Y LQ E Q +++
Sbjct: 666 CVLRDTINPYLLRRMKAD-VKIDLPSKNEQVLFCRLTDEQRDVYLEYLQSRECQAILSGK 724
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
G L+ L++I NH ++ P+
Sbjct: 725 YQIFAG-----------------------------LITLRKICNHPDICTGGPK------ 749
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
L+G + Q + + K GKM +E L+ W +G ++LLFS
Sbjct: 750 ---------------LLIGEDTQGDPTLEYGYWKRSGKMIVVEALLKLWKQQGHRVLLFS 794
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S MLDI E F+ + Y + R+DG TP + RQ+L+ +N PS +FL++TR GGLG+N
Sbjct: 795 QSRAMLDIFESFVQNQKYCYLRMDGGTPISSRQALITTYNQDPSIYLFLLTTRVGGLGVN 854
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+IFDP+WNP+ D QA++R++R GQ + V ++RLL++G++EE +Y RQ++KQ L
Sbjct: 855 LTGANRVIIFDPDWNPSTDTQARERTWRIGQTKQVTIYRLLTSGTIEEKIYHRQIFKQFL 914
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 915 TNRVLKDPKQRRFFK 929
>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia porcellus]
Length = 1477
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 304/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 501 FKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 557
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 558 IRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAHRKEKLIRD 617
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 618 IAHCH-GILITSYSYVRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII 676
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A
Sbjct: 677 LSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYRCAC 736
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 737 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYQILNGE 796
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G LV L++I NH +L P++
Sbjct: 797 MQIFSG-----------------------------LVALRKICNHPDLFSGGPKNL--GG 825
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 826 LPDEELEEGQFG-------------------YWKRSGKMIVVESLLKIWHRQGQRVLLFS 866
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML ILE FL +GYS+ ++DGST RQ L+ +N S VFL++TR GGLG+N
Sbjct: 867 QSRQMLHILEVFLRARGYSYLKMDGSTTIASRQPLITRYNQDTSIFVFLLTTRVGGLGVN 926
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQKR V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 927 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFL 986
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 987 TNRVLKDPKQRRFFK 1001
>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
Length = 1136
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 320/589 (54%), Gaps = 90/589 (15%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG+Y +VP I +L ++Q+ G+K+L++L++ GGILGD+MGLGKTIQ I F A++
Sbjct: 275 DGDY--FKVPKEIWEKLYKYQKIGIKWLWELHQQGSGGILGDEMGLGKTIQMIVFFGALY 332
Query: 181 GKDESSDSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRWS-------TFNVSIYHG 231
+ LKD +G LI+CP++++ W EF +W +Y G
Sbjct: 333 W-------SRLKDKITGIRGLGPSLIVCPATLMHQWVEEFHKWCPPIRVVVLHETGVYKG 385
Query: 232 PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
D+I E + G+ LIT+++ H + L + NW VI+DE H+++N SK+ +A
Sbjct: 386 KPGDLIKEVWSSKGI--LITTYNGLLQHINNLLKNNWHYVILDEGHKIRNPDSKITVAAK 443
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
+LK+ +RI ++G+ +QN + EL++LFD++ P LGT F + + P+ HG A E
Sbjct: 444 QLKSSHRIIISGSPIQNHLKELWSLFDFIFPSKLGTLPAFIKSFAVPITHGGYANATELQ 503
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLP 410
I A + L + YLLRR K + H+ + K + V+FC +++ QK YR L+
Sbjct: 504 ITTAYKCATILKDTISPYLLRRMKADIQSHISLPDKNEQVLFCRLTEEQKTMYRGYLEHS 563
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
+I I ++G C V + +L+ I NH ++ +
Sbjct: 564 DIISEI-----------------------MNGS-----CKVFVGISRLRTICNHPDIFQT 595
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
N L + FG K GKM +E L+ W
Sbjct: 596 N-------------LETGAFGY-------------------WKKSGKMIVVEALLKMWKK 623
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+G ++LLF+ SV+ML+I +KF+I + YS+ +L+G+T RQ +++ FN PS V +++
Sbjct: 624 QGHRVLLFTQSVKMLNIFQKFIIEQNYSYLKLEGATSIGSRQPIINKFNKDPSIFVMILT 683
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T+ GGLG+NL+ A+RV+IFDP+WNPA DLQA++R++R GQ V ++RLL+AG++EE +Y
Sbjct: 684 TKVGGLGVNLIGADRVIIFDPDWNPATDLQARERAWRIGQTNSVTIYRLLTAGTIEEKIY 743
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDN 699
RQ++KQ LSN + ++R+F+ + ELF + +D+ DN
Sbjct: 744 HRQIFKQFLSNKVLVDPKQRRFFKS-----NYLYELFTL----QDVDDN 783
>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1481
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 309/564 (54%), Gaps = 67/564 (11%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D E+ ++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA
Sbjct: 482 DAEFDDFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA--- 538
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNR 234
G S T + + G +I+CP++V+ W EF + W F V+I H +
Sbjct: 539 GLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKK 598
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ ++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +
Sbjct: 599 EKLIRDIAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFR 657
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
T +RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++
Sbjct: 658 TPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT 717
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + L + YLLRR K + L + K + V+FC +++ Q R Y+ + E+
Sbjct: 718 AYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDSKEVY 777
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK---P 470
++N D+ G LV L++I NH +L
Sbjct: 778 RILNGDMQIFSG-----------------------------LVALRKICNHPDLFSGGPK 808
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
NP+D P D EL FG K GKM +E L+ W
Sbjct: 809 NPKDIP-----DGELEEDQFG-------------------YWKRSGKMIVVESLLKIWHK 844
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+G ++LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++
Sbjct: 845 QGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLT 904
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
TR GG+G+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE ++
Sbjct: 905 TRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIF 964
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFE 674
RQ++KQ L+N + ++R+F+
Sbjct: 965 HRQIFKQFLTNRVLKDPKQRRFFK 988
>gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca]
Length = 1488
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 311/568 (54%), Gaps = 68/568 (11%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV- 179
D E+ ++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA +
Sbjct: 482 DAEFDDFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS 541
Query: 180 FGKDESSDST---ILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-- 233
+ K + S +L G +I+CP++V+ W EF + W F V+I H
Sbjct: 542 YSKIRTRGSNYRQVLLCRLFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSY 601
Query: 234 ---RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
++ ++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC
Sbjct: 602 TQKKEKLIRDIAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLAC 660
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+ +T +RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A
Sbjct: 661 KQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPV 720
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQL 409
++ A + L + YLLRR K + L + K + V+FC +++ Q R Y+ +
Sbjct: 721 QVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDS 780
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
E+ ++N D+ G LV L++I NH +L
Sbjct: 781 KEVYRILNGDMQIFSG-----------------------------LVALRKICNHPDLFS 811
Query: 470 ---PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
NP+D P D EL FG K GKM +E L+
Sbjct: 812 GGPKNPKDIP-----DGELEEDQFG-------------------YWKRSGKMIVVESLLK 847
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W +G ++LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S V
Sbjct: 848 IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFV 907
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FL++TR GG+G+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++E
Sbjct: 908 FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE 967
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
E ++ RQ++KQ L+N + ++R+F+
Sbjct: 968 EKIFHRQIFKQFLTNRVLKDPKQRRFFK 995
>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Nomascus leucogenys]
Length = 1492
Score = 332 bits (850), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 307/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 496 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 552
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 553 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 612
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 613 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 671
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 672 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 731
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 732 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 791
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 792 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 820
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL + FG K GKM +E L+ W +G ++LLFS
Sbjct: 821 LPDEELEADQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 861
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 862 QSRQMLDILEVFLRAQKYTYLKMDGTTTVASRQPLITRYNEDTSIFVFLLTTRVGGLGIN 921
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 922 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 981
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 982 TNRVLKDPKQRRFFK 996
>gi|392574587|gb|EIW67723.1| hypothetical protein TREMEDRAFT_74496 [Tremella mesenterica DSM
1558]
Length = 884
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 216/603 (35%), Positives = 312/603 (51%), Gaps = 40/603 (6%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P + +P SIN L E+QR GV+F Y+ Y GGILGDDMGLGKTIQ IAFL+A+ K
Sbjct: 123 PSLCIPQSINRFLREYQRAGVRFFYEHYTEGRGGILGDDMGLGKTIQVIAFLSAIMRK-S 181
Query: 185 SSDSTILKDNKVDKKGY----------VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNR 234
+D+ + ++ + LI+CP S++ NWE E W F + + N
Sbjct: 182 GTDADWQRRKRLVRGSATAVHPRHWPTALIVCPKSLVNNWERELETWGYFEHATWRSENA 241
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ + + ++++I S D+ R+H + + ++IVDEAHRLK +++ +A +++
Sbjct: 242 ETVRSQFLNAYLDIIICSLDTVRVHSESIKSLPVSVLIVDEAHRLKEPEAQTTLALKKIE 301
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL--TAPERFI 352
R LTGT++QN++ E++++ D V G GT + +REF P+K G RL TA E
Sbjct: 302 CRICFALTGTLIQNRMDEMWSVLDLVWRGWAGTSKEWREFAVNPIKRGHRLNGTAEEVVK 361
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
I H +L + LRR K I + K D VVFC + Q AY+ L+ +
Sbjct: 362 GIMRLGLVH-EKILPHFYLRRDK-RLIADELPEKRDLVVFCPLGIAQISAYQALVDSEGV 419
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
Q ++ + C CGS +++CC RL + L K+ + +H N
Sbjct: 420 QFILKRKEACDCGSGEARIDCCHRLTEEGETLGMAVLKYMSALGKVSNVGSHHSQYHTNE 479
Query: 473 RDEPDK---QRKDAELASAVFGPDIDLVGGNAQNE-SFIGLSDVKSCGKMRALEKLMYSW 528
QR+ A G L G +A++ F G D +CGK +
Sbjct: 480 EASGSSVPWQRRFAAYCKHASGIRRVLTGCSARSTGGFSGFVDPSNCGKWMVNQ------ 533
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF- 587
S G + R D K G+SF L G +N RQ +VD F P + F
Sbjct: 534 -SHG-----IANDWRRDDNDNKV---SGFSFDILSGEVEANERQEMVDRFQ-DPQQDYFI 583
Query: 588 -LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
L+ST AGG+GLNL +AN+VVIFDP+WNPA DLQA DR+FR GQKR V V+RL+ G+LE
Sbjct: 584 LLVSTLAGGVGLNLTAANKVVIFDPSWNPANDLQAMDRAFRIGQKRPVDVYRLIGKGTLE 643
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK--EFQGELFGICNLFRDLSDNLFTSE 704
EL Y RQ++KQQ + G E+R G++ + E QGELFG N+FR N F S+
Sbjct: 644 ELKYERQIHKQQRARQLNEGTFERRIHIGMEGARNVEDQGELFGSQNIFR-FDPNGFVSK 702
Query: 705 IIE 707
+E
Sbjct: 703 NLE 705
>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
Length = 1494
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 498 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 554
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 555 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 614
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 615 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 673
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 674 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 733
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 734 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 793
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 794 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 822
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 823 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 863
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 864 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 923
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 924 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 983
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 984 TNRVLKDPKQRRFFK 998
>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
[Pongo abelii]
Length = 1493
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASSVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|426364707|ref|XP_004049439.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Gorilla gorilla gorilla]
Length = 1493
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|358341364|dbj|GAA49064.1| DNA excision repair protein ERCC-6 [Clonorchis sinensis]
Length = 1267
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 336/642 (52%), Gaps = 75/642 (11%)
Query: 71 RREKAPVEKSNVFDDEEKEKEQEQEKFGRH------QLGQFQFDHTGPFEPLVLSKDGEY 124
R K P+ DD E+ Q++ + RH QL + + P P DG+
Sbjct: 81 RLPKKPIRTIKKLDDANLEQFQKRLRRQRHLDALERQLAKEHGEDPDPVPP-----DGQL 135
Query: 125 PI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAA----- 178
VP I RL E+QR GV +L++L++ + GGILGD+MGLGKTIQ IAFLA
Sbjct: 136 DKNFLVPGRIWSRLFEYQRTGVNWLWQLHQKQSGGILGDEMGLGKTIQIIAFLAGLHYSE 195
Query: 179 --VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG---- 231
V GK + LI+CP++V+Q W EF +W V+I H
Sbjct: 196 FLVTGKSGHLGPGPSHRHSTGDFASALIVCPATVLQQWLREFHQWYPAMRVAILHSTGSG 255
Query: 232 ---PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEV--NWEIVIVDEAHRLKNEKSKL 286
PN ++ + VL+T++ + + +L+ V +W +I+DE H++KN ++++
Sbjct: 256 YQKPNS--LIRSMGNHPGSVLLTTYQTLVTYQDVLTAVEPSWTYLILDEGHKIKNPEAEV 313
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
A T +R+ L+G+ MQN + EL++LFD+V+PG LG F + + P+ G +
Sbjct: 314 THAVKRFATSHRLILSGSPMQNNLRELWSLFDFVSPGRLGPLPEFMQQFAIPITQGGYAS 373
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + A L +L +L+RR K + + + K + V+FC +++ Q++ YR
Sbjct: 374 ASPLQVETAYRCACTLRDLLMPFLIRRLKTD-VQIQLPAKSEQVLFCRLTNYQRQLYREF 432
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ + CK L N G V L+ L+++ NH +
Sbjct: 433 ----------------------AESQLCKDLLNGKGN-------VFTALILLRKLCNHPD 463
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE-SFIGLSDVKSCGKMRALEKLM 525
L+ PRD L + D+D+ + +E + + KM + L+
Sbjct: 464 LVTGGPRDH-------ILLGDELPEDDVDVTTVSRISEYGWTRFGCPRRSSKMLVVASLL 516
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+W+++G K+LLFS S RML +LE+ LI G ++ R+DGSTP + R +L+D FN S
Sbjct: 517 RTWSTQGHKVLLFSQSRRMLCLLERLLITLGITYLRMDGSTPVSQRPALIDRFNRSTDSS 576
Query: 586 -----VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
VFL++TR GGLG+NL +ANRV+IFDP+WNP DLQA++R++R GQ + VI++RLL
Sbjct: 577 AENIFVFLLTTRVGGLGINLTAANRVLIFDPDWNPMTDLQARERAWRIGQTQDVIIYRLL 636
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
++G++EE +Y RQ++KQ L+N + ++R+F+ D +E
Sbjct: 637 TSGTIEEKIYHRQIFKQFLTNRVLKNPRQQRFFK-TNDLQEL 677
>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1495
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 499 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 555
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 556 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 615
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 616 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 674
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 675 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 734
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 735 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 794
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 795 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 823
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 824 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 864
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 865 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 924
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 925 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 984
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 985 TNRVLKDPKQRRFFK 999
>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
Length = 1493
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1496
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 500 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 556
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 557 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 616
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 617 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 675
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 676 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 735
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 736 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 795
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 796 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 824
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 825 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 865
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 866 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 925
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 926 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 985
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 986 TNRVLKDPKQRRFFK 1000
>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
Length = 1495
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 499 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 555
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 556 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 615
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 616 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 674
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 675 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 734
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 735 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 794
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 795 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 823
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 824 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 864
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 865 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 924
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 925 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 984
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 985 TNRVLKDPKQRRFFK 999
>gi|340376710|ref|XP_003386875.1| PREDICTED: DNA repair protein rhp26-like [Amphimedon queenslandica]
Length = 1230
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 314/567 (55%), Gaps = 75/567 (13%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
E V+ +DG +VP+SI +L +Q+ GVK+L++L+ + GGI+GD+MGLGKTI+ I
Sbjct: 338 EAAVVVEDG----FRVPSSIWHKLYRYQQTGVKWLWELHSQQAGGIMGDEMGLGKTIEMI 393
Query: 174 AFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-- 230
FLA + K + S + ++ + G +L++CP++V+ W EF W F V+I H
Sbjct: 394 GFLAGL--KISNVRSHVTRELGL---GPILVVCPATVLHQWVHEFHSWYPPFRVAILHDT 448
Query: 231 ---GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
G ++ +L+++ + V++T++ S R+ +L WE VI+DE H+++N + +
Sbjct: 449 GSYGGSKASLLKRMVSAN-GVIVTTYASVRLQTDLLLRHQWEYVILDEGHKIRNPDADIT 507
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
+AC + T +RI L+G+ +QN + EL++LFD+V PG LGT F E + P+ G A
Sbjct: 508 LACKQFPTPHRIILSGSPVQNNLKELWSLFDFVYPGKLGTLPVFLEQFSVPITLGGYAHA 567
Query: 348 PERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
+ + A L + YLLRR K + + + K + V+FC ++D Q+ Y +
Sbjct: 568 SQTQVETAYRCACILRDTINPYLLRRLKSD-VKLQLPNKNEQVLFCRLTDYQRELYEEYI 626
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
+ PE++ ++ G L+ L+++ NH +L
Sbjct: 627 KGPEVEAMMRGGKQIFSG-----------------------------LMTLRKLCNHPDL 657
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
+ RD ++ ES+ G + GKM +E L+
Sbjct: 658 VAGGVRD--------------------------SEEESY-GF--WRRSGKMIVIESLLKM 688
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
W + KILLFS S +ML ILEKFLI Y++ R+DG+T RQ L+ DFN PS VF
Sbjct: 689 WLGQKHKILLFSQSRQMLYILEKFLISNSYTYLRMDGTTSIGARQKLIKDFNEDPSIFVF 748
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L++TR GGLG+NL A+RV+I+DP+WNP+ D QA++R++R GQ + V ++RLL+ G++EE
Sbjct: 749 LLTTRVGGLGVNLTGADRVLIYDPDWNPSTDTQARERAWRIGQTKPVTIYRLLTGGTIEE 808
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFE 674
VY RQ++KQ L+N + ++R+F+
Sbjct: 809 KVYHRQIFKQFLTNRVLRDPRQRRFFK 835
>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
Length = 1491
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 495 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 551
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 552 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 611
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 612 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 670
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 671 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 730
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 731 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 790
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 791 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 819
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 820 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 860
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 861 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 920
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 921 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 980
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 981 TNRVLKDPKQRRFFK 995
>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
Full=ATP-dependent helicase ERCC6; AltName:
Full=Cockayne syndrome protein CSB
gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
Length = 1493
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
Length = 1481
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 487 FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 543
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V++ H ++ ++
Sbjct: 544 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEKLVRD 603
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 604 IARCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 662
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 663 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 722
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 723 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 782
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G LV L++I NH +L P++ K
Sbjct: 783 MQIFSG-----------------------------LVALRKICNHPDLFSGGPKNL--KG 811
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 812 IPDEELGEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 852
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 853 QSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 912
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 913 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 972
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 973 TNRVLKDPKQRRFFK 987
>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
Length = 1101
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 105 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 161
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 162 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 221
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 222 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 280
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 281 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 340
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 341 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 400
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 401 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 429
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 430 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 470
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 471 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 530
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 531 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 590
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 591 TNRVLKDPKQRRFFK 605
>gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus]
Length = 1490
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 495 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 551
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 552 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 611
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 612 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 670
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 671 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQVKTAYKCAC 730
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 731 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 790
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 791 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 819
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 820 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 860
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 861 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDKSIFVFLLTTRVGGLGVN 920
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 921 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 980
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 981 TNRVLKDPKQRRFFK 995
>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
Length = 1356
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|403276713|ref|XP_003930033.1| PREDICTED: DNA excision repair protein ERCC-6 [Saimiri boliviensis
boliviensis]
Length = 1492
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 496 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 552
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 553 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 612
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 613 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 671
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 672 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQVKTAYKCAC 731
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 732 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 791
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 792 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 820
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 821 LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 861
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 862 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 921
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 922 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 981
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 982 TNRVLKDPKQRRFFK 996
>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
familiaris]
Length = 1486
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 308/564 (54%), Gaps = 68/564 (12%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D E+ ++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA
Sbjct: 487 DAEFDDFKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA--- 543
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNR 234
G S T + + G +I+CP++V+ W EF + W F V+I H +
Sbjct: 544 GLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKK 603
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ ++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +
Sbjct: 604 EKLIRDIAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFR 662
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
T +RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++
Sbjct: 663 TPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKT 722
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + L + YLLRR K + L + K + V+FC +++ Q + Y+ + E+
Sbjct: 723 AYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVY 782
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
++N D+ G LV L++I NH +L P+
Sbjct: 783 RILNGDMQIFSG-----------------------------LVALRKICNHPDLFSGGPK 813
Query: 474 DE---PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ PD +D FG K GKM +E L+ W
Sbjct: 814 NLKTIPDDDEEDQ------FGY-------------------WKRSGKMIVVESLLKIWHK 848
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+G ++LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++
Sbjct: 849 QGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLT 908
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
TR GG+G+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y
Sbjct: 909 TRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIY 968
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFE 674
RQ++KQ L+N + ++R+F+
Sbjct: 969 HRQIFKQFLTNRVLKDPKQRRFFK 992
>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
Length = 1481
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 305/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 487 FKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 543
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V++ H ++ ++
Sbjct: 544 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKERLVRD 603
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 604 IAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII 662
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 663 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 722
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 723 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 782
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G LV L++I NH +L P+ K
Sbjct: 783 MQIFSG-----------------------------LVALRKICNHPDLFSGGPKSL--KG 811
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 812 APDEELGEDEFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 852
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 853 QSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVFLLTTRVGGLGVN 912
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 913 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 972
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 973 TNRVLKDPKQRRFFK 987
>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
Length = 1490
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 322/601 (53%), Gaps = 70/601 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 496 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 552
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 553 IRTRGSNYRYEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 612
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 613 IAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 671
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 672 LSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCAC 731
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 732 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKIYQNFVDSKEVYGILNGE 791
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ + P L+ L++I NH +L ++ K
Sbjct: 792 MQ-----------------------------IFPGLIALRKICNHPDLFSGGTKNL--KG 820
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 821 LPEDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 861
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 862 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 921
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 922 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 981
Query: 660 SNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIESHEEQGQQQER 718
+N + ++R+F+ +L+ + +L D S + TS I Q +R
Sbjct: 982 TNRVLKDPKQRRFFKS--------NDLYELFSLTSPDTSQSTETSAIFAGTGSDVQTPKR 1033
Query: 719 H 719
H
Sbjct: 1034 H 1034
>gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
Length = 1493
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 305/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFCTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1234
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 220/716 (30%), Positives = 359/716 (50%), Gaps = 141/716 (19%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y +VP I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 410 DGGY---RVPGDIYHYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH 466
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI-- 237
K+ K ++++CP +V++ W EF RW + F VSI H MI
Sbjct: 467 -----------YSKKLTKP--IIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINL 513
Query: 238 ---------------------------------LEKLEACGVEVLITSFDSYRIHGSILS 264
L+++ A G VL+T++ + + S+L
Sbjct: 514 RRESYADARLESQIWDPNQPRKATKEQKAAKKILDRVLAKG-HVLVTTYSGLQTYSSLLI 572
Query: 265 EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS 324
V W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P
Sbjct: 573 PVEWGCSILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMR 632
Query: 325 LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM 384
LGT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 633 LGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK 692
Query: 385 GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCD 444
K + V+FC ++ +Q+ AY+ L E+ ++ R + L G D
Sbjct: 693 -KSEQVLFCKLTKIQRSAYQAFLGSNEMSSILRG-----------------RREALYGID 734
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
L++I NH +L P + + SA
Sbjct: 735 ------------MLRKICNHPDL----PEHKTLSTKPGYNYGSAA--------------- 763
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLD 563
GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+ + R+D
Sbjct: 764 ---------KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMD 814
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
G+TP LRQSLVD+FN++P +FL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++
Sbjct: 815 GNTPIKLRQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARE 874
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQ 683
R++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F + D
Sbjct: 875 RAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFH-MSDLH--- 930
Query: 684 GELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTL- 742
+LF + N TSE+ + E + Q+ +H T+ G E+ +V ++ N +
Sbjct: 931 -DLFTLGN-----DGPTETSELFKEAEVKFQESAKHGATDNPAAG-ESTVVDQEEQNKIS 983
Query: 743 ----------------LSTGSKTRKSSDPEM-ARTSKPLLEDMGIVYAHRNDDIVN 781
T S+T+ ++ P AR + + G+ A ++ IVN
Sbjct: 984 HVTGVASLEPFQSPAETPTASETKSTAAPNSEARLMEGIFARSGVHSAVEHEQIVN 1039
>gi|327302918|ref|XP_003236151.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
gi|326461493|gb|EGD86946.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
Length = 1225
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 223/758 (29%), Positives = 379/758 (50%), Gaps = 149/758 (19%)
Query: 86 EEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGV 145
E+ +K ++++ +H ++ H P P + DG Y Q+P I L ++Q+ GV
Sbjct: 350 EDNDKPEDEQTSDQHLEEEWHLPH--PTTPDTVL-DGGY---QLPGDIYPYLFDYQKTGV 403
Query: 146 KFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLII 205
K+L++LY+ + GGI+GD+MGLGKTIQ IAFLA + + KG ++++
Sbjct: 404 KWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKL-------------KGPIIVV 450
Query: 206 CPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA-------CGV----------- 246
CP +V++ W EF RW F VSI H M+ K E+ GV
Sbjct: 451 CPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRNSTSQRG 510
Query: 247 ---------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
VL+T++ + + S+L V+W I ++DE H+++N + + + C
Sbjct: 511 NKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSITIHCK 570
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR ++ P++ G A
Sbjct: 571 ELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASNLQ 630
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
++ A + + L + YLL+R K + L K + V+FC ++ +Q+ AY L E
Sbjct: 631 VQTAAKCAETLRDAISPYLLQRFKIDVAADLPK-KSEQVLFCKLTKVQRAAYEAFLASGE 689
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
+ ++ R + L G D L++I NH +L +
Sbjct: 690 MSSILRG-----------------RREALYGID------------MLRKICNHPDLTQ-- 718
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
+ D G+ GKM+ ++ L+ W
Sbjct: 719 ---------------HKILSTKTDYNYGSGAK-----------SGKMQVVKSLLELWKDT 752
Query: 532 GDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
G K LLF+ MLDILE+F+ G+++ R+DG+TP +RQS+VD+FN+ P VFL++
Sbjct: 753 GHKTLLFAQHRIMLDILERFIGGFNGFNYRRMDGNTPIKVRQSMVDEFNNDPDLHVFLLT 812
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V ++RL++AG++EE +Y
Sbjct: 813 TKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIY 872
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN--------LFRDLSDNLFT 702
RQ++KQ L+N + +++ F+ + D + +LF + N +F+D +D +F
Sbjct: 873 HRQIFKQFLTNKILRDPKQRQTFQ-MSDIQ----DLFTLGNDGPTETSQMFKD-ADIVFE 926
Query: 703 SEIIESHEE--QGQQQERHHCTNQ-------------GFKGLETHIVSSKDSNTLLSTGS 747
+ G+QQ R N+ G G+E + D + T
Sbjct: 927 DNAAKGKNTGFSGRQQRRRQPENKPVKEEDQKISRVTGVAGMEEY----HDETSGPGTPQ 982
Query: 748 KTRKSSDPEMARTSKPLLEDM----GIVYAHRNDDIVN 781
+ +++ ++T L+E++ G++ A +D I++
Sbjct: 983 QEKEAEGESKSKTDARLMENIFSRSGVLSAVEHDQIIH 1020
>gi|344258207|gb|EGW14311.1| Putative DNA repair and recombination protein RAD26-like
[Cricetulus griseus]
Length = 1762
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/494 (37%), Positives = 279/494 (56%), Gaps = 57/494 (11%)
Query: 203 LIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSI 262
L++ P SV+ NW+ E W F V++ HG +D+ L +L+ E+ +T++++ R+
Sbjct: 16 LVVAPLSVLYNWKDELDTWGYFRVTVLHGSKKDIGLLRLKQRKCEIALTTYETLRLCLEE 75
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
L+ + W VIVDEAHR+KN K+++ LK + RIGLTGT++QN + EL+ + DW P
Sbjct: 76 LNSLEWSAVIVDEAHRIKNPKARVTQVMKALKCKVRIGLTGTVLQNNMKELWCVMDWAVP 135
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LG++ +F++ + +P++HGQR TA +R + + L + LRRTK G L
Sbjct: 136 GLLGSKSYFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGCFLRRTKTLIKGQL 195
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDG 442
KED ++ Q R L C S LT
Sbjct: 196 P-KKEDR------TNSQGDKVRTL-----------------CLSYLTV------------ 219
Query: 443 CDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA--ELASAVFGPDIDLVGGN 500
LQ+++NH+ L++ KQ++ ++ VF D V
Sbjct: 220 ---------------LQKVANHVALLQTA---STSKQQETLIKKICDQVFSRFPDFVQ-K 260
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFS 560
+++ +F LSD K GKM+ L++L+ + DK+LLFS+S ++LD+L+++ + G +
Sbjct: 261 SKDAAFETLSDPKYSGKMKVLQQLLNHFRKHRDKVLLFSFSTKLLDVLQQYCMASGLDYR 320
Query: 561 RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN V++FDP WNPA DLQ
Sbjct: 321 RLDGSTKSEERLKIVKEFNSTKDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQ 380
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK 680
A DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V + KRYFE VQ K
Sbjct: 381 AIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSK 440
Query: 681 EFQGELFGICNLFR 694
E +GELFG+ NLF+
Sbjct: 441 EHRGELFGVHNLFK 454
>gi|440902038|gb|ELR52884.1| DNA excision repair protein ERCC-6 [Bos grunniens mutus]
Length = 1488
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 308/559 (55%), Gaps = 62/559 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA + + K +
Sbjct: 487 FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 546
Query: 186 SDST---ILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDM 236
S +L + G +I+CP++V+ W EF + W F V++ H ++
Sbjct: 547 RGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEK 606
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T
Sbjct: 607 LVRDIARCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTP 665
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
+RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A
Sbjct: 666 HRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAY 725
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ +
Sbjct: 726 KCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRI 785
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+N ++ G LV L++I NH +L P++
Sbjct: 786 LNGEMQIFSG-----------------------------LVALRKICNHPDLFSGGPKNL 816
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
K D EL FG K GKM +E L+ W +G ++
Sbjct: 817 --KGIPDEELGEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRV 855
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG
Sbjct: 856 LLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGG 915
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++
Sbjct: 916 LGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 975
Query: 656 KQQLSNIAVSGKLEKRYFE 674
KQ L+N + ++R+F+
Sbjct: 976 KQFLTNRVLKDPKQRRFFK 994
>gi|242795848|ref|XP_002482676.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719264|gb|EED18684.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1210
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 334/643 (51%), Gaps = 123/643 (19%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y +VP I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 409 DGGY---RVPGDIFPVLFDYQKTGVQWLWELYQQQVGGIIGDEMGLGKTIQVISFLAGLH 465
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------- 230
S +L NK V+++ P++V++ W EF RW F VSI H
Sbjct: 466 ------HSRLL--NKP-----VIVVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINV 512
Query: 231 ---------------GPNRDMILEKLEACG-------VE---VLITSFDSYRIHGSILSE 265
P+R + K + VE VL+T++ + + +L
Sbjct: 513 RSESNRENALTNEMWDPSRPYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVLIP 572
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W+ I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 573 VDWDCAILDEGHKIRNPNTSITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMRL 632
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT FR ++ P++ G A ++ A + L + YLL+R K + L
Sbjct: 633 GTLVDFRNQFEFPIRQGGYANASNLQVQTAARCAETLKDAISPYLLQRFKVDVASDLPK- 691
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC +S LQ++AY + L E + R L G D
Sbjct: 692 KSEQVLFCKLSPLQRKAYEQFLNSQECNSIF-----------------AGRRQVLYGVD- 733
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L+ +F +
Sbjct: 734 -----------MLRKICNHPDLV-----------------THKLFS-------------T 752
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDG 564
G D GKM+ ++ L+ W G K LLF+ ML+ILEKF+ G+++ R+DG
Sbjct: 753 TTGYGDASKSGKMQVVKALLELWKDTGHKTLLFAQHRIMLNILEKFVNTLSGFNYRRMDG 812
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
TP + RQ LVD+FN+SP VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 813 DTPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDMQARER 872
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE--GVQDCKEF 682
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ FE + D
Sbjct: 873 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFEMSNLHD---- 928
Query: 683 QGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
LF + + + N+F +E+ +++E+G+ +E+ T Q
Sbjct: 929 ---LFSLGEEGQTETSNMFKTEV--TYQEKGETKEKKPGTEQA 966
>gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans
CBS 112818]
Length = 1225
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 229/773 (29%), Positives = 387/773 (50%), Gaps = 152/773 (19%)
Query: 72 REKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPA 131
R++A +E + ++ + E EQ +H ++ H P P + DG Y Q+P
Sbjct: 337 RDRAKLEALRLSGEDNVKPENEQTS-DQHLEEEWHLPH--PTTPDTVL-DGGY---QLPG 389
Query: 132 SINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
I L ++Q+ GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA + +
Sbjct: 390 DIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKL------ 443
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA------- 243
KG ++++CP +V++ W EF RW F VSI H M+ K E+
Sbjct: 444 -------KGPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYT 496
Query: 244 CGV--------------------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
GV VL+T++ + + S+L V+W I ++DE H
Sbjct: 497 SGVWGDRNSTSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGH 556
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR ++
Sbjct: 557 KIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEF 616
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
P++ G A ++ A + + L + YLL+R K + L K + V+FC ++
Sbjct: 617 PIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-KSEQVLFCKLTK 675
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
+Q+ AY L E+ ++ R + L G D
Sbjct: 676 VQRAAYEAFLASGEMSSILRG-----------------RREALYGID------------M 706
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
L++I NH +L + V D G+ GK
Sbjct: 707 LRKICNHPDLTQ-----------------HKVLSTKTDYNYGSGAK-----------SGK 738
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDGSTPSNLRQSLV 575
M+ ++ L+ W G K LLF+ MLDILE+F IR G+++ R+DG+TP +RQS+V
Sbjct: 739 MQVVKSLLELWKDTGHKTLLFAQHRIMLDILERF-IRGFDGFNYRRMDGNTPIKVRQSMV 797
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V
Sbjct: 798 DEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVT 857
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN---- 691
++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D + +LF + N
Sbjct: 858 IYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDIQ----DLFTLGNDGPT 912
Query: 692 ----LFRDLSDNLFTSEIIESHEEQ--GQQQERHHCTNQ-------------GFKGLETH 732
+F+D +D ++ + + + G+QQ R N+ G G+E +
Sbjct: 913 ETSQMFKD-ADIVYEDDAAKGKNAKSSGRQQGRRQPENKPVKEEDQKISRVTGVAGMEEY 971
Query: 733 IVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDM----GIVYAHRNDDIVN 781
D + T + +++ ++T L+E++ G++ A +D I++
Sbjct: 972 ----HDETSGPGTPQQEKEAEGESKSKTDARLMENIFSRSGVLSAVEHDQIIH 1020
>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1421
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 309/555 (55%), Gaps = 60/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ I+FLA G S
Sbjct: 493 FKVPGFLWKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQVISFLA---GLSYSK 549
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H N+ ++ +
Sbjct: 550 LRTRGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSNKKKLIPE 609
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ +C +LITS+ + RI L +W VI+DE H+++N +++ AC + +T +R
Sbjct: 610 IASCH-GILITSYSAVRIMQDTLQGWDWHYVILDEGHKIRNPNARVTTACKQFRTPHRFI 668
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 669 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCAC 728
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + +L + K + V+FC +++ Q++ Y+ L E+ ++N D
Sbjct: 729 VLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYQSFLDSKEVYQILNGD 788
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L PR
Sbjct: 789 MQVFSG-----------------------------LIALRKICNHPDLFSGGPR------ 813
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
L + P+ L E G K GK+ +E L+ W +G ++LLF+
Sbjct: 814 -----LLRGI--PEDQLT-----EEEHFGF--WKRSGKLIVVESLLRLWFRQGQRVLLFT 859
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML+ILE F+ YS+ ++DG+TP + RQ L+ +N S +FL++T+ GGLG+N
Sbjct: 860 QSRQMLNILEVFVRENKYSYVKMDGTTPISSRQPLIACYNEDKSIFIFLLTTKVGGLGVN 919
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V ++RLL+AG++EE +Y RQ++KQ L
Sbjct: 920 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFL 979
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 980 TNRVLKDPKQRRFFK 994
>gi|350592895|ref|XP_003483566.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1481
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 304/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 486 FKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 542
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 543 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRD 602
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 603 IAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII 661
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 662 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 721
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 722 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 781
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G LV L++I NH +L P+
Sbjct: 782 MQIFSG-----------------------------LVALRKICNHPDLFSGGPK------ 806
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ + G E G K GKM +E L+ W +G ++LLFS
Sbjct: 807 -------------NFKGIPGEELEEDQFGY--WKRSGKMIVVESLLKIWHKQGQRVLLFS 851
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 852 QSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNEDASIFVFLLTTRVGGLGVN 911
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 912 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 971
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 972 TNRVLKDPKQRRFFK 986
>gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
Length = 1226
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 231/764 (30%), Positives = 382/764 (50%), Gaps = 158/764 (20%)
Query: 81 NVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
NV +EE+ Q+QE+ ++ H P P + DG Y Q+P I+ L ++
Sbjct: 354 NVKPEEEQIPVQQQEE-------EWHLPH--PTTPDTVL-DGGY---QLPGDIHPYLFDY 400
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKG 200
Q+ GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA + + KG
Sbjct: 401 QKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKL-------------KG 447
Query: 201 YVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA-------CGV------ 246
++++CP +V++ W EF RW F VSI H M+ K E+ GV
Sbjct: 448 PIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRNA 507
Query: 247 --------------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
VL+T++ + + S+L V+W I ++DE H+++N + +
Sbjct: 508 TSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSI 567
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR ++ P++ G
Sbjct: 568 TIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFELPIRTGGYAN 627
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A ++ A + + L + YLL+R K + L K + V+FC ++ +Q+ AY
Sbjct: 628 ASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-KSEQVLFCKLTKVQRAAYEAF 686
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L E+ ++ R + L G D L++I NH
Sbjct: 687 LASGEMSSILRG-----------------RREALYGID------------MLRKICNH-- 715
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
PD+ +Q + S KS GKM+ ++ L+
Sbjct: 716 -------------------------PDLTQHKILSQKTDYNYGSGAKS-GKMQVVKSLLE 749
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
W G K LLF+ MLDILE+F IR G+++ R+DG+TP RQS+VD+FN+ P
Sbjct: 750 LWKETGHKTLLFAQHRIMLDILERF-IRGFDGFNYRRMDGNTPIKARQSMVDEFNNDPDL 808
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V ++RL++AG+
Sbjct: 809 HVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGT 868
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN--------LFRDL 696
+EE +Y RQ++KQ L+N + +++ F+ + D + +LF + N +F+D
Sbjct: 869 IEEKIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDIQ----DLFTLGNDGPTETSQMFKD- 922
Query: 697 SDNLFTSEIIESHE--EQGQQQERHHCTNQ-------------GFKGLETHIVSSKDSNT 741
+D ++ + + G+QQ R N+ G G+E + D +
Sbjct: 923 ADVVYEDDAAKGKNVGPAGRQQRRRQPENKPVKEEDQKISRVTGVAGMEEY----HDEAS 978
Query: 742 LLSTGSKTRKSSDPEMARTSKPLLEDM----GIVYAHRNDDIVN 781
T + ++ +T L+E++ G++ A +D I++
Sbjct: 979 GPGTPQEEKEGEGDSKGKTDARLMENIFSRSGVLTALEHDQIIH 1022
>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1286
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 309/558 (55%), Gaps = 66/558 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ I+FLA G S
Sbjct: 379 FKVPGFLWKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQVISFLA---GLSYSK 435
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H N+ ++ +
Sbjct: 436 LRTRGSNYRYAGLGPTIIVCPATVMHQWVREFHAWWPPFRVAVLHETGSFSSNKKKLIPE 495
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ +C +LITS+ + RI L +W +I+DE H+++N + + +AC + +T +R
Sbjct: 496 IVSCH-GILITSYSAVRIMQDTLQRWDWHYIILDEGHKIRNPNAGVTLACKQFRTPHRFI 554
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 555 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCAC 614
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + +L + K + V+FC +++ Q++ YR L E+ ++N+D
Sbjct: 615 VLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYRSFLDSKEVYQILNRD 674
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP---RDEP 476
+ V P L+ L++I NH +L P R P
Sbjct: 675 MQ-----------------------------VFPGLIALRKICNHPDLFSGGPQFLRGVP 705
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
+ Q AQ + F K GK+ +E L+ W +G ++L
Sbjct: 706 EDQL--------------------AQEDRF---GFWKRSGKLIVVESLLRLWFRQGQRVL 742
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LF+ S +ML+ILE F+ YS+ ++DG+T + RQ L+ +N S +FL++T+ GGL
Sbjct: 743 LFTQSRQMLNILEVFVRENNYSYLKMDGTTSISSRQPLIARYNEDNSIFIFLLTTKVGGL 802
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL ANRV+I+DP+WNP+ D QA++R++R GQ + V ++RLL+AG++EE +Y RQ++K
Sbjct: 803 GVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTQQVTIYRLLTAGTIEEKIYHRQIFK 862
Query: 657 QQLSNIAVSGKLEKRYFE 674
Q L+N + ++R+F+
Sbjct: 863 QFLTNRVLKDPKQRRFFK 880
>gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
Length = 1240
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 332/639 (51%), Gaps = 115/639 (17%)
Query: 72 REKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPA 131
R++A +E + D+ + E EQ +H ++ H P P + DG Y Q+P
Sbjct: 352 RDRAKLEALRLSGDDNVKPEDEQTS-DQHLEEEWHLPH--PTTPDTV-LDGGY---QLPG 404
Query: 132 SINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
I L ++Q+ GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA + +
Sbjct: 405 DIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKK------- 457
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA------- 243
KG ++++CP +V++ W EF RW F VSI H M+ K E+
Sbjct: 458 ------LKGPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYT 511
Query: 244 CGV--------------------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
GV VL+T++ + + S+L V+W I ++DE H
Sbjct: 512 SGVWGDRNSTSQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGH 571
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR ++
Sbjct: 572 KIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEF 631
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
P++ G A ++ A + + L + YLL+R K + L K + V+FC ++
Sbjct: 632 PIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-KSEQVLFCKLTK 690
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
+Q+ AY L E+ ++ R + L G D
Sbjct: 691 VQRAAYEAFLASGEMSSILRG-----------------RREALYGID------------M 721
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
L++I NH +L + + D G+ GK
Sbjct: 722 LRKICNHPDLTQ-----------------HKILSTKTDYNYGSGAK-----------SGK 753
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDGSTPSNLRQSLV 575
M+ ++ L+ W G K LLF+ MLDILE+F IR G+++ R+DG+TP +RQS+V
Sbjct: 754 MQVVKSLLELWKDTGHKTLLFAQHRIMLDILERF-IRGFDGFNYRRMDGNTPIKVRQSMV 812
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V
Sbjct: 813 DEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVT 872
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 873 IYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 911
>gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb18]
Length = 1236
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 216/709 (30%), Positives = 357/709 (50%), Gaps = 138/709 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 414 RVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH------- 466
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------- 237
K+ K ++++CP +V++ W EF RW + F VSI H MI
Sbjct: 467 ----YSKKLTKP--IIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYAD 520
Query: 238 --------------------------LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIV 271
L+++ A G VL+T++ + + S+L V+W
Sbjct: 521 ARLESQIWDPDQPRRATKEQKAAKKILDRVLAKG-HVLVTTYSGLQTYSSLLIPVDWGCS 579
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +F
Sbjct: 580 ILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNF 639
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R ++ P++ G A ++ A + + L + YLL+R K + L K + V+
Sbjct: 640 RNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVL 698
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC ++ +Q+ AY+ L E+ ++ R + L G D
Sbjct: 699 FCKLTKIQRSAYQAFLGSNEMSSILRG-----------------RREALYGID------- 734
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH +L P + + SA
Sbjct: 735 -----MLRKICNHPDL----PEHKTLSTKPGYNYGSAA---------------------- 763
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDGSTPSNL 570
GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+ + R+DG+TP L
Sbjct: 764 --KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKL 821
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQSLVD+FN++P +FL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQ
Sbjct: 822 RQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQ 881
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC 690
KR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +LF +
Sbjct: 882 KREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDLH----DLFTLG 936
Query: 691 NLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTL-------- 742
N TSE+ + E + Q+ +H T+ G E+ + ++ N +
Sbjct: 937 N-----DGPTETSELFKEAEVKFQESAKHGTTDNPAAG-ESTVADQEEQNKISHVTGVAA 990
Query: 743 ---------LSTGSKTRKSSDPEM-ARTSKPLLEDMGIVYAHRNDDIVN 781
T S+T+ ++ P AR + + G+ A ++ IVN
Sbjct: 991 LEPFQCPSETPTASETKSTAAPNSEARLMEGIFARSGVHSALEHEQIVN 1039
>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
Length = 1501
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 302/556 (54%), Gaps = 63/556 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 501 FKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 557
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN------RDMILE 239
T + + + G +I+CP++V+ W EF + W F V+I H +I +
Sbjct: 558 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRD 617
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
G+ LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 618 IARYHGI--LITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRI 675
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 676 ILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 735
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + YLLRR K + L + K + V+FC ++D Q Y+ + E+ ++N
Sbjct: 736 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNG 795
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
++ G LV L++I NH +L PR
Sbjct: 796 EMQIFSG-----------------------------LVALRKICNHPDLFSGGPRHL--- 823
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
L G ++ + F K GKM +E L+ W +G ++LLF
Sbjct: 824 ---------------TGLPDGESEEDQF---GYWKRSGKMIVVESLLKIWHKQGQRVLLF 865
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
S S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG+G+
Sbjct: 866 SQSRQMLDILEVFLRARKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGV 925
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ
Sbjct: 926 NLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQF 985
Query: 659 LSNIAVSGKLEKRYFE 674
L+N + ++R+F+
Sbjct: 986 LTNRVLKDPKQRRFFK 1001
>gi|432112497|gb|ELK35235.1| DNA excision repair protein ERCC-6 [Myotis davidii]
Length = 1489
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 321/605 (53%), Gaps = 71/605 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA + + K +
Sbjct: 487 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 546
Query: 186 SDST---ILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDM 236
S +L + G +I+CP++V+ W EF + W F V++ H ++
Sbjct: 547 RGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHRKEK 606
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T
Sbjct: 607 LIRDIAHCH-GILITSYSYIRLRQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTP 665
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
+RI L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A
Sbjct: 666 HRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAY 725
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ +
Sbjct: 726 KCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRI 785
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+N ++ G L+ L++I NH +L P+
Sbjct: 786 LNGEMQVFSG-----------------------------LIALRKICNHPDLFSGGPKT- 815
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+ D E FG + GKM +E L+ W +G ++
Sbjct: 816 -TRGISDNEPEEDQFG-------------------HWRRSGKMIVVESLLKIWHKQGQRV 855
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG
Sbjct: 856 LLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGG 915
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL ANRV+I+DP+WNP+ D QA++R++R GQ++ V V+RLL+AG++EE +Y RQ++
Sbjct: 916 LGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQRKQVTVYRLLTAGTIEEKIYHRQIF 975
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIESHEEQGQ 714
KQ L+N + ++R+F+ +L+ + L D S TS I + Q
Sbjct: 976 KQFLTNRVLKDPKQRRFFKS--------NDLYELFTLTSPDASQGTETSAIFAGTGSEVQ 1027
Query: 715 QQERH 719
+RH
Sbjct: 1028 TPKRH 1032
>gi|431901320|gb|ELK08347.1| DNA excision repair protein ERCC-6 [Pteropus alecto]
Length = 1491
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 305/559 (54%), Gaps = 62/559 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA + + K +
Sbjct: 492 FKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 551
Query: 186 SDST---ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN-----RDM 236
S +L D G +I+CP++V+ W EF W F V+I H ++
Sbjct: 552 RGSNYRQVLLCRLFDGLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHESGSCTRKKEK 611
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T
Sbjct: 612 LIRDIARCH-GILITSYSYIRLMQDDISSHDWHYVILDEGHKIRNPNAAITLACKQFRTP 670
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
+RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A
Sbjct: 671 HRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAY 730
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ +
Sbjct: 731 KCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRI 790
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+N ++ G L+ L++I NH +L P++
Sbjct: 791 LNGEMQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL 821
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
K D EL FG K GKM +E L+ W +G ++
Sbjct: 822 --KGIPDDELGEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRV 860
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLFS S +ML ILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG
Sbjct: 861 LLFSQSRQMLGILEIFLRAQNYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGG 920
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++
Sbjct: 921 LGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIF 980
Query: 656 KQQLSNIAVSGKLEKRYFE 674
KQ L N + ++R+F+
Sbjct: 981 KQFLINRVLKDPKQRRFFK 999
>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
Length = 1495
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 303/554 (54%), Gaps = 58/554 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 492 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 548
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGP----NRDMILEKL 241
T + + G +I+CP++V+ W EF + W F V+I H N+ + L +
Sbjct: 549 IRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIRE 608
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
A +LITS+ R+ + +W VI+DE H+++N + + +AC + +T +RI L
Sbjct: 609 IASCHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 668
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 669 SGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 728
Query: 362 LVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + YLLRR K + L + K + V+FC ++D Q++ Y+ + E+ ++N D+
Sbjct: 729 LRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNGDM 788
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
G LV L++I NH +L P+
Sbjct: 789 QVFSG-----------------------------LVALRKICNHPDLFSGGPK------- 812
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ V PD DL E K GKM +E L+ W +G ++L F+
Sbjct: 813 ----ILKCV--PDADL-------EEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQ 859
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
S +ML ILE FL + YS+ R+DG+T RQ L+ +N S +FL++TR GG+G+NL
Sbjct: 860 SRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNL 919
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
A+RV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+
Sbjct: 920 TGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLT 979
Query: 661 NIAVSGKLEKRYFE 674
N + ++R+F+
Sbjct: 980 NRVLKDPKQRRFFK 993
>gi|410975581|ref|XP_003994209.1| PREDICTED: DNA excision repair protein ERCC-6 [Felis catus]
Length = 1485
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 306/562 (54%), Gaps = 62/562 (11%)
Query: 121 DGEYPIIQVPASINCRLLE-HQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
D E+ ++P + L +Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA
Sbjct: 482 DAEFDDFKIPGFLFKNFLSMYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA-- 539
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN----- 233
G S T + + G +I+CP++V+ W EF + W F V+I H
Sbjct: 540 -GLSYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHK 598
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
++ ++ + C +LITS+ R+ +S +W VI+DE H+++N + + +AC +
Sbjct: 599 KEKLIRDIAHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQF 657
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
+T +RI L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++
Sbjct: 658 RTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK 717
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
A + L + YLLRR K + L + K + V+FC +++ Q + Y+ + E+
Sbjct: 718 TAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEV 777
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
++N D+ G LV L++I NH +L P
Sbjct: 778 YRILNGDMQIFSG-----------------------------LVALRKICNHPDLFSGGP 808
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
++ + D EL FG K GKM +E L+ W +G
Sbjct: 809 KNL--RGIPDEELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQG 847
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
++LLFS S +MLDILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR
Sbjct: 848 QRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTR 907
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GG+G+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y R
Sbjct: 908 VGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHR 967
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++KQ L+N + ++R+F+
Sbjct: 968 QIFKQFLTNRVLKDPKQRRFFK 989
>gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1236
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 215/709 (30%), Positives = 357/709 (50%), Gaps = 138/709 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 414 RVPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH------- 466
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------- 237
K+ K ++++CP +V++ W EF RW + F VSI H MI
Sbjct: 467 ----YSKKLTKP--IIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYAD 520
Query: 238 --------------------------LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIV 271
L+++ A G VL+T++ + + S+L V+W
Sbjct: 521 ARLESQIWDPDQPRRATKEQKAAKKILDRVLAKG-HVLVTTYSGLQTYSSLLIPVDWGCS 579
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +F
Sbjct: 580 ILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNF 639
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R ++ P++ G A ++ A + + L + YLL+R K + L K + V+
Sbjct: 640 RNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVL 698
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC ++ +Q+ AY+ L E+ ++ R + L G D
Sbjct: 699 FCKLTKIQRSAYQAFLGSNEMSSILRG-----------------RREALYGID------- 734
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH +L P + + SA
Sbjct: 735 -----MLRKICNHPDL----PEHKTLSTKPGYNYGSAA---------------------- 763
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDGSTPSNL 570
GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+ + R+DG+TP L
Sbjct: 764 --KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKL 821
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQSLVD+FN++P +FL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQ
Sbjct: 822 RQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQ 881
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC 690
KR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +LF +
Sbjct: 882 KREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDLH----DLFTLG 936
Query: 691 NLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTL-------- 742
N TSE+ + E + Q+ +H T+ G E+ + ++ N +
Sbjct: 937 N-----DGPTETSELFKEAEVKFQESVKHGTTDNPAAG-ESTVADQEEQNKISHVTGVAA 990
Query: 743 ---------LSTGSKTRKSSDPEM-ARTSKPLLEDMGIVYAHRNDDIVN 781
T S+T+ ++ P AR + + G+ A ++ +VN
Sbjct: 991 LEPFQCPAETPTASETKSTAAPNSEARLMEGIFARSGVHSALEHEQVVN 1039
>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1486
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 303/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 491 FKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 547
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H ++ +++
Sbjct: 548 IRTRGSNYRFQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSSTHKKEKLIQD 607
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 608 IVHCH-GILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII 666
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 667 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 726
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 727 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 786
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
G L L++I NH +L P++ K
Sbjct: 787 TQIFSG-----------------------------LTALRKICNHPDLFSGGPKNH--KG 815
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W + ++LLFS
Sbjct: 816 ISDDELEEDRFGY-------------------WKRSGKMIVVESLLKIWHKQNQRVLLFS 856
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLD+LE FL + YS+ ++DG+T RQ L+ FN S VFL++TR GGLG+N
Sbjct: 857 QSRQMLDLLEVFLRAQKYSYLKMDGTTTIASRQPLIARFNKETSIFVFLLTTRVGGLGVN 916
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 917 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 976
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 977 TNRVLKDPKQRRFFK 991
>gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
Length = 1220
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 366/724 (50%), Gaps = 148/724 (20%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P + L ++Q+ GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 377 DGGY---RLPGDVYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIH 433
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILE 239
+ KG ++++CP +V++ W EF RW F VSI H M+
Sbjct: 434 YSKK-------------LKGPIIVVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNI 480
Query: 240 KLEA-------CGV--------------------------EVLITSFDSYRIHGSILSEV 266
K E+ GV VL+T++ + + S+L V
Sbjct: 481 KSESQAEDRYTSGVWGDRNSTTQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPV 540
Query: 267 NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLG 326
+W I ++DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LG
Sbjct: 541 DWGIAVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLG 600
Query: 327 TREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGK 386
T +FR ++ P++ G A ++ A + + L + YLL+R K + L K
Sbjct: 601 TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-K 659
Query: 387 EDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSC 446
+ V+FC ++ +Q+ AY L E+ ++ R + L G D
Sbjct: 660 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRG-----------------RREALYGID-- 700
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
L++I NH +L + + D G+
Sbjct: 701 ----------MLRKICNHPDLTQ-----------------HKILSTKTDYNYGSGAK--- 730
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDG 564
GKM+ ++ L+ W G K LLF+ MLDILE+F IR G+++ R+DG
Sbjct: 731 --------SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERF-IRGFDGFNYRRMDG 781
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP +RQS+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 782 NTPIKVRQSMVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARER 841
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +
Sbjct: 842 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDIQ---- 896
Query: 685 ELFGICN--------LFRDLSDNLFTSEIIESHE--EQGQQQERHHCTNQ---------- 724
+LF + N +F+D +D ++ + + G+QQ R N+
Sbjct: 897 DLFTLGNDGPTETSQMFKD-ADIVYEDDAAKGKNAGSSGRQQRRRQPENKPVKEEDQKIS 955
Query: 725 ---GFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDM----GIVYAHRND 777
G G+E + D + T + +++ ++T L+E++ G++ A +D
Sbjct: 956 RVTGVAGMEEY----HDETSGPGTPQQEKEAEGESKSKTDARLMENIFSRSGVLSAVEHD 1011
Query: 778 DIVN 781
I++
Sbjct: 1012 QIIH 1015
>gi|351700010|gb|EHB02929.1| DNA excision repair protein ERCC-6 [Heterocephalus glaber]
Length = 1488
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 304/559 (54%), Gaps = 62/559 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA + + K +
Sbjct: 495 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRT 554
Query: 186 SDST---ILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDM 236
S +L + G +I+CP++V+ W EF + W +F V+I H ++
Sbjct: 555 RGSNYRQVLLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPSFRVAILHETGSCTHRKEN 614
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
++ + C +LITS+ R+ S NW VI+DE H+++N + + +AC + +T
Sbjct: 615 LIRDIAHCH-GILITSYSYIRLMQDDFSRQNWHYVILDEGHKIRNPNAAVTLACKQFRTP 673
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
+RI L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A
Sbjct: 674 HRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAY 733
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ +
Sbjct: 734 KCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFINSKEVYKI 793
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+N ++ G +V L++I NH +L P++
Sbjct: 794 LNGEMQLFSG-----------------------------IVALRKICNHPDLFSGGPKNL 824
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
D EL FG K GKM +E L+ W +G ++
Sbjct: 825 GG--LPDDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRV 863
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLFS S +ML ILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG
Sbjct: 864 LLFSQSRQMLHILEVFLRAQKYSYLKMDGTTTIASRQPLIARYNEDASIFVFLLTTRVGG 923
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+G+NL ANRV+I+DP+WNP+ D QA++R++R GQKR V V+RLL AG++EE +Y RQ++
Sbjct: 924 IGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLMAGTIEEKIYHRQIF 983
Query: 656 KQQLSNIAVSGKLEKRYFE 674
KQ L+N + +R+F+
Sbjct: 984 KQFLTNRVLKDPKPRRFFK 1002
>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Meleagris gallopavo]
Length = 1498
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 303/554 (54%), Gaps = 58/554 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 494 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 550
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGP----NRDMILEKL 241
T + + G +I+CP++V+ W EF + W F V+I H N+ + L +
Sbjct: 551 IRTRGSNYRYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIRE 610
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
A +LITS+ R+ + +W VI+DE H+++N + + +AC + +T +RI L
Sbjct: 611 IASCHGILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIIL 670
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 671 SGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV 730
Query: 362 LVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + YLLRR K + L + K + V+FC ++D Q+R Y+ + E+ ++N D+
Sbjct: 731 LRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRRVYQNFIDSKEVYQILNGDM 790
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
G LV L++I NH +L P+
Sbjct: 791 QVFSG-----------------------------LVALRKICNHPDLFSGGPK------- 814
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ + PD DL E K GKM +E L+ W +G ++L F+
Sbjct: 815 ----ILKCL--PDADL-------EEADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQ 861
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
S +ML ILE F+ + YS+ R+DG+T RQ L+ +N S +FL++TR GG+G+NL
Sbjct: 862 SRQMLQILEVFVRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNL 921
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
A+RV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+
Sbjct: 922 TGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLT 981
Query: 661 NIAVSGKLEKRYFE 674
N + ++R+F+
Sbjct: 982 NRVLKDPKQRRFFK 995
>gi|452988763|gb|EME88518.1| hypothetical protein MYCFIDRAFT_46188 [Pseudocercospora fijiensis
CIRAD86]
Length = 1208
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 309/581 (53%), Gaps = 105/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++LY + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 395 RIPGDIYPSLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTIQIISFLAGLH------- 447
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------L 238
K+ K ++++CP++V++ W EF RW VSI H M+
Sbjct: 448 ----YSGKIQKP--IIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVGRENRYE 501
Query: 239 EKLEACGV------------------------EVLITSFDSYRIHGSILSEVNWEIVIVD 274
E LEA VL+T++ + + +L +WE ++D
Sbjct: 502 EALEAEDYSSKKTLSKGQKAAKRILDTVTKQGHVLVTTYSGLQTYAELLIPTDWEYAVLD 561
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H+++N + + + C EL T NR+ L+GT MQN + EL++LFD+V P LGT +F+
Sbjct: 562 EGHKIRNPNTAITIYCKELCTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQ 621
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
++ P+KHG A + A + + L + YLL+R K + L K + V+FC
Sbjct: 622 FEIPIKHGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDVAADLPK-KSERVLFCK 680
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
++ LQ+ AY+ L +++ ++N + L G D
Sbjct: 681 LTKLQREAYQWFLDSEDMKSIMNG-----------------KRQALYGVDI--------- 714
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH +L++ R ++ + +G D +
Sbjct: 715 ---LRKICNHPDLVE---------HRTLSKKSEYNYG-------------------DGRK 743
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+S+ R+DG+TP RQ+
Sbjct: 744 SGKMQVVKSLLQEWKRDGHKTLLFAQHRIMLDILERFIGNMAGFSYRRMDGTTPIKERQN 803
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
LVD+FN+ P VFL++T+ GGLG+NL ANRV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 804 LVDEFNNDPDLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDVQARERAWRLGQKRE 863
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V+++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 864 VLIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 904
>gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1441
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 305/562 (54%), Gaps = 61/562 (10%)
Query: 121 DGEYPI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
D E+P +VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA
Sbjct: 469 DVEFPEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQVGGILGDEMGLGKTIQIIAFLA-- 526
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN----- 233
G S T + + G LI+CP++V+ W EF W F V++ H
Sbjct: 527 -GLSYSKIRTRGSNYRFTGLGPSLIVCPTTVMHQWVKEFHNWWPPFRVAVLHETGSYIKK 585
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ ++ ++ AC +LITS+ R+ + NW VI+DE H+++N + + +AC +
Sbjct: 586 KVKLIREIAACN-GILITSYSYVRLLQESIHRYNWHYVILDEGHKIRNPNAAVTLACKQF 644
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
T +RI L+G+ +QN + EL++LFD+V PG LGT F E + P+ G A ++
Sbjct: 645 STPHRIILSGSPIQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVK 704
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
A + L + YLLRR K L + K + V+FC ++D Q Y+R + E+
Sbjct: 705 TAYKCACILRDTINPYLLRRMKANVKMSLSLPDKNEQVLFCRLTDEQHEVYKRFIDSKEV 764
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
++N ++ G L L++I NH ++ P
Sbjct: 765 YQILNGEMQIFSG-----------------------------LTALRKICNHPDIFSGGP 795
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
+ + V PD +L E G K GKM +E L+ W +G
Sbjct: 796 K-----------ILKGV--PDEEL-----NEEDHFGF--WKRSGKMIVVESLLKIWYKQG 835
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
++LLF+ S +ML I+E FL ++ YS+ ++DG+T RQ L+ FN S +FL++TR
Sbjct: 836 HRVLLFTQSRQMLHIIEAFLKQRSYSYVKMDGTTTVASRQPLISRFNEDTSIFIFLLTTR 895
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLG+NL A+RV+I+DP+WNP+ D QA++R++R GQ + V V+RLL+AG++EE +Y R
Sbjct: 896 VGGLGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQTKEVTVYRLLTAGTIEEKIYHR 955
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++KQ L+N + ++R+F+
Sbjct: 956 QIFKQFLTNRILKDPKQRRFFK 977
>gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio]
Length = 1390
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 303/556 (54%), Gaps = 62/556 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + +L ++Q+ GV+++++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 474 FKIPGFLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 530
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH------GPNRDMILE 239
T + + G +I+CP++V+ W EF + W F V++ H +I E
Sbjct: 531 LKTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPE 590
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ + G+ LITS+ RI + +W VI+DE H+++N + + AC + +T +R
Sbjct: 591 IVASHGI--LITSYSYIRIMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRTPHRF 648
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 649 ILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCA 708
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + YLLRR K + +L + K + V+FC +++ Q++ Y+ L E+ ++N
Sbjct: 709 CVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVYQILNG 768
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D+ G L+ L++I NH +L PR
Sbjct: 769 DMQVFSG-----------------------------LIALRKICNHPDLFTGGPR----- 794
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
L + P L E G K GKM +E L+ W +G ++LLF
Sbjct: 795 ------LLRGI--PHDQLT-----EEEHFGY--WKRSGKMIVVESLLRLWHKQGHRVLLF 839
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ S +ML+ILE F+ G+S+ ++DG+T RQ L+ FN + VF+++TR GGLG+
Sbjct: 840 TQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQNKDIFVFILTTRVGGLGV 899
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ
Sbjct: 900 NLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQF 959
Query: 659 LSNIAVSGKLEKRYFE 674
L+N + ++R+F+
Sbjct: 960 LTNRVLKDPKQRRFFK 975
>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [synthetic construct]
Length = 1481
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 303/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 493 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 549
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V++ H ++ ++
Sbjct: 550 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRD 609
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C VLITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 610 IVYCH-GVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 668
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 669 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 728
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + + ++N +
Sbjct: 729 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGE 788
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
G LV L++I NH +L P++
Sbjct: 789 NQIFSG-----------------------------LVALRKICNHPDLFSGGPKN----- 814
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
GP D + + E F + GKM +E L+ W +G ++LLFS
Sbjct: 815 ---------ASGPPEDEL----EEEQF---GHWRRSGKMIVVESLLKIWHRQGQRVLLFS 858
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML ILE FL YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 859 QSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVN 918
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 919 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 978
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 979 TNRVLKDPKQRRFFK 993
>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis
domestica]
Length = 1492
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 311/558 (55%), Gaps = 66/558 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 491 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 547
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGP----NRDM-ILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H N+ + ++++
Sbjct: 548 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYTNKKVKLIQE 607
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ ++ +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 608 IARCH-GILITSYSYIRLMQDNINNHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 666
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 667 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 726
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q++ Y+ + E+ ++N +
Sbjct: 727 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQNFIDSKEVYRILNGE 786
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP---RDEP 476
+ G LV L++I NH +L P + P
Sbjct: 787 MQVFSG-----------------------------LVALRKICNHPDLFSGGPKIIKGIP 817
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D + ++A+ FG K GKM +E L+ W +G ++L
Sbjct: 818 DDELEEADQ----FGY-------------------WKRSGKMIVVESLLKIWHKQGHRVL 854
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LFS S +ML +LE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG+
Sbjct: 855 LFSQSRQMLHLLEVFLRARDYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGI 914
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++K
Sbjct: 915 GVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFK 974
Query: 657 QQLSNIAVSGKLEKRYFE 674
Q L+N + ++R+F+
Sbjct: 975 QFLTNRILKDPKQRRFFK 992
>gi|336271287|ref|XP_003350402.1| hypothetical protein SMAC_02114 [Sordaria macrospora k-hell]
gi|380090924|emb|CCC11457.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1172
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 297/567 (52%), Gaps = 105/567 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY + GGI+GD+MGLGKT+Q I+F+AA+
Sbjct: 383 LKLPGDIYPSLFDYQKTGVQWLAELYAQQVGGIVGDEMGLGKTVQLISFVAALH------ 436
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
K+DK V+++ P++V++ W EF RW VSI H M
Sbjct: 437 -----YSRKLDKP--VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGEL 489
Query: 237 ---------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
I+E++ G VL+T++ + +G +L V+W ++DE
Sbjct: 490 DDREDDYGKRKPKKSSQAAKRIVERVVKHG-HVLVTTYAGLQTYGDVLIPVDWGYAVLDE 548
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD++ P LGT FR +
Sbjct: 549 GHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQF 608
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P+K G A I A + + L + YLL+R K + L K + V+FC +
Sbjct: 609 EIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAADLPK-KSEQVLFCKL 667
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S Q+ AY L+ ++ ++N+ +L G D
Sbjct: 668 SKPQREAYELFLKSDDMTAILNR-----------------TRQSLYGIDI---------- 700
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L+ P +D+P Q
Sbjct: 701 --LRKICNHPDLLDPRLKDDPSYQ-----------------------------WGSTNKS 729
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-GYSFSRLDGSTPSNLRQSL 574
GKM ++ L+ W G K LLF +MLDI+E F+ R+ G ++ R+DG TP RQ+L
Sbjct: 730 GKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKTPVKDRQTL 789
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD FN++P +FL++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQK+ V
Sbjct: 790 VDQFNNNPDLHIFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKEV 849
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RL++AG++EE +Y RQ++KQ LSN
Sbjct: 850 TIYRLMTAGTIEEKIYHRQIFKQFLSN 876
>gi|402465772|gb|EJW01437.1| hypothetical protein EDEG_00031 [Edhazardia aedis USNM 41457]
Length = 793
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 312/562 (55%), Gaps = 83/562 (14%)
Query: 118 LSKDGEY-PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFL 176
L KDG I VP+ I +L ++Q+E +K+ Y+LYK + G +L D+MGLGKT+Q IAFL
Sbjct: 233 LRKDGHIIEDIVVPSFIWEKLFDYQKESIKWFYELYKKEVGAVLADEMGLGKTLQVIAFL 292
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYHGPNRD 235
+A++ + K + LII PS+++ W EF ++ F + + H + D
Sbjct: 293 SALYISN--------------KIKFTLIIVPSTLLNQWVTEFKKFFPFLRIILIHKSHTD 338
Query: 236 MI---LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
I +++ C VLI S+D Y+ +GS L +N++ +++DE H++KN+ S + +
Sbjct: 339 NISKLFKEITKCFCVVLI-SYDGYKTYGSHLRNINFDYIVLDEGHKIKNKDSNISLQISR 397
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
L +N+I L+GT +QN + EL+ +F++V G LGT E F Y++P+K+G A E +
Sbjct: 398 LVCKNKIVLSGTPIQNNLKELWAIFNFVNYGLLGTHEEFVTEYEDPIKNGGYRGATEEVV 457
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
A + + L +++ +++RR K E G L K D V+FC ++D+Q+ Y++ L+ I
Sbjct: 458 HKAYTKSRMLRNLIKPFIMRRLKSEVAGEL-PNKTDLVIFCKLTDIQESLYQKELESEFI 516
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
+ L G SC +P L+ L++I NH L N
Sbjct: 517 YKI------------------------LIGKQSC-----MPGLMSLRKICNHPYLFTRN- 546
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
+ + DI VK+ GKM+ +++L+ W S+G
Sbjct: 547 ---------------STYKDDI-----------------VKNSGKMKKVDELLQKWRSEG 574
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
K L+F+ + M+++LE ++ +S+ ++DG T R+ +D FNS + FL++TR
Sbjct: 575 KKALIFTQMIGMIELLEIYMAENDFSYLKMDGKTSLKTREEYIDKFNSDDNIFAFLLTTR 634
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLGLNLV A+R++I+DP+WNP+ D QA++R++R+GQ++ V ++RL++AG++EE +Y R
Sbjct: 635 VGGLGLNLVGASRIIIYDPDWNPSTDSQAKERAYRYGQEKDVKIYRLIAAGTIEEKIYNR 694
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++K LS +S ++FE
Sbjct: 695 QIFKNMLSQKILSDPKLSKFFE 716
>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
Length = 1157
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 303/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 169 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 225
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V++ H ++ ++
Sbjct: 226 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRD 285
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C VLITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 286 IVYCH-GVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 344
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 345 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 404
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + + ++N +
Sbjct: 405 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGE 464
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
G LV L++I NH +L P++
Sbjct: 465 NQIFSG-----------------------------LVALRKICNHPDLFSGGPKN----- 490
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
GP D + + E F + GKM +E L+ W +G ++LLFS
Sbjct: 491 ---------ASGPPEDEL----EEEQF---GHWRRSGKMIVVESLLKIWHRQGQRVLLFS 534
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML ILE FL YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 535 QSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVN 594
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 595 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 654
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 655 TNRVLKDPKQRRFFK 669
>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
griseus]
Length = 1478
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 301/555 (54%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 490 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 546
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-----GPNRDMILEK 240
T + + + G +I+CP++V+ W EF W F V+I H ++ ++
Sbjct: 547 IRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHETGSYAHKKERLVRD 606
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C VLITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 607 IVHCH-GVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 665
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 666 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 725
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 726 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE 785
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
G LV L++I NH +L P++
Sbjct: 786 NQIFSG-----------------------------LVALRKICNHPDLFSGGPKNLSG-- 814
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 815 LPEDELEEDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFS 855
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML ILE FL YS+ ++DG+T RQ L+ +N S VFL++TR GG+G+N
Sbjct: 856 QSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGIGVN 915
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 916 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 975
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 976 TNRVLKDPKQRRFFK 990
>gi|212536498|ref|XP_002148405.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
gi|210070804|gb|EEA24894.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
Length = 1157
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 334/642 (52%), Gaps = 123/642 (19%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y +VP I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 356 DGGY---RVPGDIFPILFDYQKTGVQWLWELYQQQVGGIIGDEMGLGKTIQVISFLAGLH 412
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------- 230
K+ K V+++ P++V++ W EF RW F VSI H
Sbjct: 413 -----------HSRKLTKP--VIVVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINV 459
Query: 231 ---------------GPNRDMILEKLEACG-------VE---VLITSFDSYRIHGSILSE 265
P+R + K + VE VL+T++ + + +L
Sbjct: 460 RNESNRENALNDEMWDPSRPYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVLIP 519
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W+ I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 520 VDWDCAILDEGHKIRNPNTSITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMRL 579
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT FR ++ P++ G A ++ A + L + YLL+R K + L
Sbjct: 580 GTLVDFRNQFEFPIRQGGYANASNLQVQTAARCAETLKEAISPYLLQRFKVDVASDLPK- 638
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC +S LQ++AY + L E C S L R L G D
Sbjct: 639 KSEQVLFCKLSPLQRKAYEQFLNSQE------------CNSIL-----AGRRQVLYGVDM 681
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L+ +L SA
Sbjct: 682 ------------LRKICNHPDLVT-------------HKLFSAT---------------- 700
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDG 564
G + GKM+ ++ L+ W G K LLF+ ML+ILEKF+ G+++ R+DG
Sbjct: 701 -TGYGEPSKSGKMKVVKALLELWRDTGHKTLLFAQHRIMLNILEKFVNTLSGFNYRRMDG 759
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
TP + RQ LVD+FN+SP VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 760 ETPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDMQARER 819
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE--GVQDCKEF 682
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ FE + D
Sbjct: 820 AWRLGQKREVAIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFEMSNLHD---- 875
Query: 683 QGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQ 724
LF + + + ++F +E+ +++E+G+ ++ T Q
Sbjct: 876 ---LFSLGEEGQTETSSMFKTEV--TYQEKGESKQDKIKTEQ 912
>gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1323
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 333/632 (52%), Gaps = 77/632 (12%)
Query: 78 EKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRL 137
++SN F + E+ + Q + + Q + H+ P DG + VP SI RL
Sbjct: 153 KQSNAFRETERLRRQRRTELLEEQFAREHEVHSS--NPSDGKLDGGFC---VPGSIWSRL 207
Query: 138 LEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVD 197
++QR+GVK+L+ L++ GGI+GD+MGLGKTIQ IA LA + + S L
Sbjct: 208 FDYQRKGVKWLWDLHQKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRL------ 261
Query: 198 KKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHG-------PNRDMILEKLEACGVEVL 249
G LI+CP++V+ W EF S W V+I H PN+ +++ + VL
Sbjct: 262 --GPTLIVCPATVLNQWMSEFHSWWPPIRVAILHSTGSGYGKPNK--LIQMITNNPGSVL 317
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+T++ + + +L+ NW VI+DE H++KN +++ +A T +R+ L+G+ +QN
Sbjct: 318 LTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLILSGSPIQNN 377
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL++LFD+V PG LG F + + P+ G A + A + L +L+ Y
Sbjct: 378 LRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCACTLRNLLKPY 437
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
L+RR K + L K + V+FC ++D Q++ YR L+
Sbjct: 438 LIRRLKADVQIQLP-AKSEQVLFCRLTDYQQKLYREYLE--------------------- 475
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
+ CK L N G + P L+ L+ + NH +L PRD + +
Sbjct: 476 -SQVCKDLLNGKGN-------IFPSLILLRNLCNHPDLATGGPRD--------SCFLNEE 519
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
F D + + S+ + KM + L+ +W +G K+LLFS S RML +LE
Sbjct: 520 FESDKQGIENVCLSYSWSRFGCPRRSSKMLVVASLLKNWYDQGHKVLLFSQSRRMLTLLE 579
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFN---SSPSKQV-----------FLISTRAGG 595
+ + +S+ R+DG+TP + R L+ FN +S S+++ FL++TR GG
Sbjct: 580 RLVQLMKFSYLRMDGTTPVSQRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGG 639
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SANRV+I+DP+WNP DLQA++R++R GQ R V+++RLL++G++EE +Y RQ++
Sbjct: 640 LGVNLTSANRVLIYDPDWNPTTDLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIF 699
Query: 656 KQQLSNIAVSGKLEKRYFEG--VQDCKEFQGE 685
KQ L+N + ++R+F+ +Q+ F+ E
Sbjct: 700 KQFLTNRILKNPRQQRFFKTNDLQELLTFEDE 731
>gi|254582697|ref|XP_002499080.1| ZYRO0E03190p [Zygosaccharomyces rouxii]
gi|238942654|emb|CAR30825.1| ZYRO0E03190p [Zygosaccharomyces rouxii]
Length = 1052
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 208/598 (34%), Positives = 313/598 (52%), Gaps = 125/598 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +QR V++LY+LY+ K GGI+GD+MGLGKTIQ IAFLAA+
Sbjct: 271 RIPGEIYSLLFNYQRTCVQWLYELYQQKCGGIIGDEMGLGKTIQVIAFLAALH------- 323
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG--------------- 231
N++D G VLI+CP++V++ W EF W F I H
Sbjct: 324 ----HSNQLD--GPVLIVCPATVMKQWCTEFHHWWPPFRTVILHSIGAGMASKKKMSEDE 377
Query: 232 ---------PNR------------------DMILEKL---EACGVEVLITSFDSYRIHGS 261
PN+ D +L+ L A VLIT++ RIH
Sbjct: 378 LEDMIMSGDPNQFSYGDLENSSKTKAQVESDNLLQTLIDKVAKDGHVLITTYVGLRIHAD 437
Query: 262 ILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVA 321
L ++NW I+DE H+++N S + + C +LKT NR+ L+GT +QN + EL++LFD++
Sbjct: 438 KLLKINWAYGILDEGHKIRNPDSDISLTCKKLKTPNRLILSGTPIQNNLTELWSLFDFIF 497
Query: 322 PGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH 381
PG LGT F++ + +P+ G A ++ + L ++ YLLRR K +
Sbjct: 498 PGKLGTLPIFQQQFVQPINMGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKD 557
Query: 382 LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
L KE V+FC ++ +Q+R Y L E L ++ KR
Sbjct: 558 LPEKKE-MVLFCKLTQVQRRKYLEFLHSRE----------------LEDIKGGKRR---- 596
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
VL + L++I NH +L+ RDE K+ A +G
Sbjct: 597 ---------VLYGIDILRKICNHPDLLD---RDERSKE--------ASYG---------- 626
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-----G 556
D K GKM+ +++L+ W +G K LLF+ S +MLDIL++F+ K G
Sbjct: 627 ---------DPKRSGKMQVVKQLLLLWRKEGHKALLFTQSRQMLDILQEFIAFKDQELTG 677
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
F R+DG+T ++RQSLVD+FN VFL++TR GG+G+NL ANR++IFDP+WNP+
Sbjct: 678 LKFLRMDGTTTISIRQSLVDEFNRG-DYNVFLLTTRVGGIGVNLTGANRIIIFDPDWNPS 736
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N +S +KR+F+
Sbjct: 737 TDMQARERAWRIGQKREVSIYRLMVTGSIEEKIYHRQIFKQFLTNKILSDPKQKRFFK 794
>gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
Length = 1203
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 305/583 (52%), Gaps = 107/583 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++L++ + GGI+GD+MGLGKTIQ IAFLA + + +
Sbjct: 393 RIPGDIYPYLFDYQKTGVQWLWELHQQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLT- 451
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGV 246
G V+++CP +V++ W EF RW VSI H M+ K E+
Sbjct: 452 ------------GPVIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMVNIKKESYAE 499
Query: 247 E----------------------------------VLITSFDSYRIHGSILSEVNWEIVI 272
+ VLIT++ + + S+L V+W I
Sbjct: 500 DRLMSEIWEPDRPTRLPGGQKGARRILKRVLEDGHVLITTYAGLQTYASLLIPVDWSCAI 559
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 560 LDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 619
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P++ G A ++ A + + L + YLL+R K + L K + V+F
Sbjct: 620 NQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KTEQVLF 678
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ +Q+ AY L E+ ++ R D L G D
Sbjct: 679 CKLTRVQRAAYEAFLGSNEMASIMRG-----------------RRDVLYGVDI------- 714
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH +L P Q+ D S V
Sbjct: 715 -----LRKICNHPDL----PEHRTLSQKSDYNYGSGV----------------------- 742
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG+TP +R
Sbjct: 743 -KSGKMQVVKSLIELWKETGHKTLLFAQHRIMLDILEKFMKSLPGFNYRRMDGNTPIKIR 801
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
QS+VD+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ DLQA++R++R GQK
Sbjct: 802 QSIVDEFNTDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQARERAWRLGQK 861
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 862 REVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 904
>gi|261188034|ref|XP_002620434.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
gi|239593445|gb|EEQ76026.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
Length = 1260
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 322/623 (51%), Gaps = 112/623 (17%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA + S
Sbjct: 420 VPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH------HS 473
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG-- 245
IL V+++CP +V++ W EF RW + F VSI H M+ + E+
Sbjct: 474 RILTKP-------VIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMVNLRRESYADP 526
Query: 246 --------------------------------VEVLITSFDSYRIHGSILSEVNWEIVIV 273
VL+T++ + + S+L V+W I+
Sbjct: 527 RLESQLWEPDQPRGLTKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLLIPVDWGCAIL 586
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 587 DEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNSLTELWSLFDFVFPMRLGTLVNFRN 646
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P++ G A ++ A + + L + YLL+R K + L K + V+FC
Sbjct: 647 QFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFC 705
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ +Q+ AY L E+ ++ R + L G D
Sbjct: 706 KLTKIQRSAYEAFLGSNEMSSILRG-----------------RREALYGID--------- 739
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L++I NH PD+ ++ S+ S K
Sbjct: 740 ---MLRKICNH---------------------------PDLPEHKTLSKKSSYNYGSASK 769
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQ 572
S GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+ + R+DG+TP LRQ
Sbjct: 770 S-GKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQ 828
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
S+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++RS+R GQKR
Sbjct: 829 SMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERSWRLGQKR 888
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNL 692
V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +LF + N
Sbjct: 889 EVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ-MSDLH----DLFTLGND 943
Query: 693 FRDLSDNLFTSEIIESHEEQGQQ 715
+ LF + E +G Q
Sbjct: 944 GPTETSGLFKDAEVTFQEPKGAQ 966
>gi|239615027|gb|EEQ92014.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ER-3]
gi|327349863|gb|EGE78720.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1260
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/623 (32%), Positives = 320/623 (51%), Gaps = 112/623 (17%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA + S
Sbjct: 420 VPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH------HS 473
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG-- 245
IL V+++CP +V++ W EF RW + F VSI H M+ + E+
Sbjct: 474 RILTKP-------VIVVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMVNLRRESYADA 526
Query: 246 --------------------------------VEVLITSFDSYRIHGSILSEVNWEIVIV 273
VL+T++ + + S+L V+W I+
Sbjct: 527 RLESQLWEPDQPRGLTKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLLIPVDWGCAIL 586
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 587 DEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNSLTELWSLFDFVFPMRLGTLVNFRN 646
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P++ G A ++ A + + L + YLL+R K + L K + V+FC
Sbjct: 647 QFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFC 705
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ +Q+ AY L E+ ++ R + L G D
Sbjct: 706 KLTKIQRSAYEAFLGSNEMSSILRG-----------------RREALYGID--------- 739
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L++I NH +L P + ++ SA
Sbjct: 740 ---MLRKICNHPDL----PEHKTLSKKSSYNYGSA------------------------S 768
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQ 572
GKM+ ++ L+ W G K LLF+ MLDILE+F+ G+ + R+DG+TP LRQ
Sbjct: 769 KSGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQ 828
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
S+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++RS+R GQKR
Sbjct: 829 SMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERSWRLGQKR 888
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNL 692
V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +LF + N
Sbjct: 889 EVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ-MSDLH----DLFTLGND 943
Query: 693 FRDLSDNLFTSEIIESHEEQGQQ 715
+ LF + E +G Q
Sbjct: 944 GPTETSGLFKDAEVTFQEPKGAQ 966
>gi|121714457|ref|XP_001274839.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
gi|119402993|gb|EAW13413.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
Length = 1221
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 300/569 (52%), Gaps = 108/569 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P IN L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQTIAFLA +
Sbjct: 411 RLPGDINPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQTIAFLAGLH------- 463
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGV 246
K+D G ++++CP++V++ W EF RW F VSI H MI + E+
Sbjct: 464 ----YSKKLD--GPIIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMINIRNESSRE 517
Query: 247 E---------------------------------VLITSFDSYRIHGSILSEVNWEIVIV 273
+ VL+T++ + + L V W I+
Sbjct: 518 DALLSQSYSYGSRALTSNQKAARKVVKRVVEEGHVLVTTYSGIQTYAPFLIPVEWGCAIL 577
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 578 DEGHKIRNPNTSITIHCKELRTPHRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 637
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P++ G A ++ A + + L + YLL+R K + L K + V+FC
Sbjct: 638 QFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KTEQVLFC 696
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ Q+ AY L+ ++Q ++ R L G D
Sbjct: 697 KLTKSQREAYETFLRSEDMQSILKG-----------------RRQVLYGVDI-------- 731
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L++I NH PD Q E +G GN
Sbjct: 732 ----LRKICNH-----------PDLQNHKLESHQVGYG------NGN------------- 757
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQ 572
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G++ R+DG+TP RQ
Sbjct: 758 RSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGFNHRRMDGTTPIQHRQ 817
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
++VD+FN+ P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 818 AMVDEFNNDPNLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKR 877
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
V V+RL++AG++EE +Y RQ++KQ L+N
Sbjct: 878 EVSVYRLMTAGTIEEKIYHRQIFKQFLTN 906
>gi|440792793|gb|ELR14001.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1293
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 309/554 (55%), Gaps = 99/554 (17%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++PA + L ++Q+ GV+++++L++ GGI+GD+MGLGKT+Q ++FLA +
Sbjct: 465 RLPAQLYDNLFDYQKTGVRWMWELHRQNAGGIIGDEMGLGKTVQVMSFLAGLH------H 518
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILEK 240
S +L G +LI+CP++V+Q W E +W F V++ H G D+I E+
Sbjct: 519 SEMLN-------GPILIVCPATVMQQWVRECHKWWPPFRVAVLHDTGTYSGSASDLI-ER 570
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G VLIT++ R++ ++ EV+WE ++DE +++N + + +AC L+T +R+
Sbjct: 571 IATDG-HVLITTYSGTRLNQEVMCEVDWEYAVLDEGDKIRNPDADITLACKRLRTHHRLI 629
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTG+ +QN + EL++LFD+V PG LGT + P+ G A + ++ A +
Sbjct: 630 LTGSPIQNNLTELWSLFDFVFPGKLGTE------FALPISMGGYSNATKLQVQTAYKCAV 683
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L +++ YLLRR K + M ED L ++Q ++ K
Sbjct: 684 VLRDLIKPYLLRRMKADLTAEQRMDYED-----------------YLGSKDVQDILGK-- 724
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
E R+ N VL C++ L++I NH +L+ P +
Sbjct: 725 -----------ERRDRMTNK----------VLACIMNLRKICNHPDLMLPFEK------- 756
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
Q+ + G S GK++ E+L+ W +G ++LLFS
Sbjct: 757 -------------------WPQDYGYWGRS-----GKLKVTEQLLQMWREQGHRVLLFSQ 792
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
+ +MLDI+E+F++ KGY + R+DG+T R LVD+FN++P +FL++TR GGLG+NL
Sbjct: 793 TRQMLDIVERFVVEKGYDYLRMDGTTSIGRRMGLVDEFNNNPRHFLFLLTTRVGGLGVNL 852
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ A+RV+I+DP+WNP+ D+QA++R++R GQKR V V+RL++AG++EE +Y RQ++KQ LS
Sbjct: 853 IGADRVLIYDPDWNPSTDMQARERAWRIGQKREVTVYRLITAGAVEEKIYHRQIFKQFLS 912
Query: 661 NIAVSGKLEKRYFE 674
N + ++R+F+
Sbjct: 913 NKILKDPKQRRFFK 926
>gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+]
gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+]
Length = 1197
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/567 (34%), Positives = 300/567 (52%), Gaps = 105/567 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY + GGI+GD+MGLGKT+Q I+F+AA+
Sbjct: 405 MKLPGDIYPSLFDYQKTGVQWLAELYAQQVGGIVGDEMGLGKTVQLISFVAALHY----- 459
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
S +L NK V+++ P++V++ W EF RW VSI H M
Sbjct: 460 -SKML--NKP-----VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMFNVLDEGKK 511
Query: 237 ---------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
I++K+ G VL+T++ + +G +L V W ++DE
Sbjct: 512 EDVEDNWDKKSPAKSSKAAKKIVDKVVKHG-HVLVTTYAGLQTYGDVLIPVEWGYAVLDE 570
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T NRI L+GT MQN + EL++LFD++ P LGT FR +
Sbjct: 571 GHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIFPMRLGTLVSFRTQF 630
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P+K G A I A + + L + YLL+R K + L K + V+FC +
Sbjct: 631 EVPIKLGGYANATNLQIMTAQKCAETLKEAISPYLLQRLKVDVAADLPK-KSEQVLFCKL 689
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S Q+ AY L+ E+ ++++ +L G D
Sbjct: 690 SKPQREAYELFLKSDEMASILDRSR-----------------QSLYGIDI---------- 722
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L+ P ++EP ++G V+
Sbjct: 723 --LRKICNHPDLLNPRLKNEP----------GYLWG-------------------SVEKS 751
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSL 574
GKM ++ L+ W G K LLFS +MLDI+E F+ R + R+DG TP RQ+L
Sbjct: 752 GKMAVVQSLLPMWKRLGHKTLLFSQGTQMLDIIEAFVQRLDDVRYLRMDGKTPIKQRQTL 811
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD FN+ PS VFL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQKR V
Sbjct: 812 VDQFNNDPSLDVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKREV 871
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RL++AG++EE +Y RQ++KQ LSN
Sbjct: 872 TIYRLMTAGTIEEKIYHRQIFKQFLSN 898
>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 882
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 306/555 (55%), Gaps = 60/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 105 FRVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 161
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + G +I+CP++V+ W EF + W F V+I H + ++ +
Sbjct: 162 IRTRGSNYRFKGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTNKKVKLIHE 221
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ ++ +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 222 IAGC-QGILITSYSYIRLMQDNINNYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 280
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 281 LSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 340
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++ Q+ Y+ + E+ +++ +
Sbjct: 341 VLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTAEQREVYQNFIDSKEVYSILSGE 400
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ + P L+ L+++ NH +L P+
Sbjct: 401 M-----------------------------QIFPGLMALRKMCNHPDLFSGGPK------ 425
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ V PD +L + E G K GKM +E L+ W +G ++LLFS
Sbjct: 426 -----ILKNV--PDDEL-----EEEDQFGY--WKRSGKMIVVESLLKIWHKQGHRVLLFS 471
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +ML ILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GG+G+N
Sbjct: 472 QSRQMLHILEVFLRGQKYSYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVN 531
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQKR V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 532 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFL 591
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 592 TNRVLKDPKQRRFFK 606
>gi|440640373|gb|ELR10292.1| hypothetical protein GMDG_04676 [Geomyces destructans 20631-21]
Length = 1241
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 310/572 (54%), Gaps = 111/572 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+++P I L ++Q+ GV++L +LY ++ GGI+GD+MGLGKTIQ ++F+AA+ F K
Sbjct: 417 LRLPGDIYPALYDYQKTGVQWLGELYASQVGGIVGDEMGLGKTIQVVSFIAALHFSK--- 473
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM-------- 236
+++K V+++ P++V+Q W EF RW VSI H M
Sbjct: 474 ---------QLNKP--VIVVAPATVLQQWVNEFHRWWPALRVSILHTSGSGMLNVRQEGR 522
Query: 237 --------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
I++++ G VL+T++ + +G +L V W
Sbjct: 523 VEDEEEDITRTRGGKKEPKAKKAAKRIVDRVIKQG-HVLVTTYAGLQTYGDLLVPVEWGY 581
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
++DE H+++N + + + C EL+T NRI L+GT +QN ++EL++LFD++ P LGT +
Sbjct: 582 AVLDEGHKIRNPNTTVTIYCKELQTPNRIILSGTPLQNNLIELWSLFDFIYPMRLGTLVN 641
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
FR ++ P+K G A I A + + L V+ YL++R K + L K + V
Sbjct: 642 FRNQFEIPIKLGGYANATNLQILTATKCAETLKEVIGPYLIQRLKADVASDLPK-KTEQV 700
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+FC ++ Q++AY L+ E+ ++N+ +L G D
Sbjct: 701 LFCKLTKPQRQAYEEFLKSEEMVSILNRTR-----------------QSLYGIDI----- 738
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L+++ NH +L++P R N +
Sbjct: 739 -------LRKVCNHPDLLEPRLR-----------------------------NRAGYKWG 762
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSN 569
+ GKM+ ++ L+ W +KGDKILLFS V+ML+I+E+F+ G+++ R+DG TP
Sbjct: 763 NANKSGKMQVVKALIMMWKAKGDKILLFSQGVQMLNIIEEFVKSLGGFTYLRMDGGTPIK 822
Query: 570 LRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
RQ++V +FN +P +FL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R G
Sbjct: 823 ERQTMVTNFNENPGINIFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLG 882
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
QK+ V ++RL+SAG++EE +Y RQ++KQ L++
Sbjct: 883 QKKEVTIYRLMSAGTIEEKIYHRQIFKQFLAD 914
>gi|360044828|emb|CCD82376.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1393
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 313/581 (53%), Gaps = 72/581 (12%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP SI RL ++QR+GVK+L+ L++ GGI+GD+MGLGKTIQ IA LA + + S
Sbjct: 269 VPGSIWSRLFDYQRKGVKWLWDLHQKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRS 328
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHG-------PNRDMILEK 240
L G LI+CP++V+ W EF S W V+I H PN+ +++
Sbjct: 329 YRL--------GPTLIVCPATVLNQWMSEFHSWWPPIRVAILHSTGSGYGKPNK--LMQM 378
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ VL+T++ + + +L+ NW VI+DE H++KN +++ +A T +R+
Sbjct: 379 ITNNPGSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLI 438
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ +QN + EL++LFD+V PG LG F + + P+ G A + A +
Sbjct: 439 LSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCAC 498
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L +L+ YL+RR K + L K + V+FC ++D Q++ YR L+
Sbjct: 499 TLRNLLKPYLIRRLKADVQIQLP-AKSEQVLFCRLTDYQQKLYREYLE------------ 545
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
+ CK L N G + P L+ L+ + NH +L PRD
Sbjct: 546 ----------SQVCKDLLNGKGN-------IFPSLILLRNLCNHPDLATGGPRD------ 582
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ + F D + + S+ + KM + L+ +W +G K+LLFS
Sbjct: 583 --SCFLNEEFESDKQGIENVCLSYSWSRFGCPRRSSKMLVVASLLKNWYDQGHKVLLFSQ 640
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN---SSPSKQV----------- 586
S RML +LE+ + +S+ R+DG+TP + R L+ FN +S S+++
Sbjct: 641 SRRMLTLLERLVQLMKFSYLRMDGTTPVSQRHELIRRFNYRSTSDSEKIDRTSDHLDIFL 700
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FL++TR GGLG+NL SANRV+I+DP+WNP DLQA++R++R GQ R V+++RLL++G++E
Sbjct: 701 FLLTTRVGGLGVNLTSANRVLIYDPDWNPTTDLQARERAWRIGQSRDVVIYRLLTSGTIE 760
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEG--VQDCKEFQGE 685
E +Y RQ++KQ L+N + ++R+F+ +Q+ F+ E
Sbjct: 761 EKIYHRQIFKQFLTNRILKNPRQQRFFKTNDLQELLTFEDE 801
>gi|290973846|ref|XP_002669658.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284083208|gb|EFC36914.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 1029
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 326/616 (52%), Gaps = 93/616 (15%)
Query: 74 KAPVEKSNVFDDEEKEKEQEQ-EKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQV--- 129
K P++K DD E +++ E+F + +F + E + ++K P IQ+
Sbjct: 221 KVPMKKEFKEDDSNDEYYKKRLEEFYETREVTKRFIISDEGEEMEVTKVNYGPSIQIAGS 280
Query: 130 ---PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF--GKDE 184
P I +L +Q+ +K++ +L + GGILGD+MGLGKT+Q FLA + G E
Sbjct: 281 YSIPKEIYDKLFGYQKTTLKWMCELNRQGVGGILGDEMGLGKTVQITTFLAGLHFSGLFE 340
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-----PNRDMIL 238
S +II P++V++ W+ E + W V I H N + ++
Sbjct: 341 PS----------------IIIAPATVMKQWQEEINTWWPELRVVIMHTSQGTKANFESLI 384
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
EK+ +C VLIT+++S RI+ +L+ W +I+DE H+++N + L +AC +T +R
Sbjct: 385 EKVSSCPNGVLITTYESLRIYQDVLTSKKWGYIILDEGHKIRNPDAALTLACKRFETPHR 444
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I LTGT +QN + EL++LFD+ PG LGT F + P+ G A + ++ A +
Sbjct: 445 IILTGTPIQNNLKELWSLFDFCYPGKLGTLPVFLTQFSIPITQGGYSNATKFQVQTAYKC 504
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L +++ YLLRR K++ + H + K++NV+FC ++D Q + Y L+ E+
Sbjct: 505 SCVLRDLIKPYLLRRMKKD-VKHQLPEKKENVIFCKLTDKQVKIYDEYLKSREVTG---- 559
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
LDG L+ + L+++ NH +LI + PD
Sbjct: 560 --------------------TLDGEH-----LLFKAITNLRKVCNHPDLICTEKK--PDD 592
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
FG V+ GKM +EKL+ W + ++LLF
Sbjct: 593 -----------FGA-------------------VEKSGKMMVVEKLLSLWKEQNHRVLLF 622
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
S S +MLD+ E FL + Y++SR+DG TP R L++ FNS VFL++T+ GGLG+
Sbjct: 623 SQSKKMLDVFEPFLQERDYTYSRMDGDTPVKERSVLINQFNSDDKIFVFLLTTKVGGLGV 682
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+++FDP+WNP+ DLQA +R++R GQ + V V+RL+++G++EE +Y RQ++KQ
Sbjct: 683 NLIGANRIILFDPDWNPSTDLQALERAWRLGQTKQVTVYRLMTSGTIEEKMYHRQIFKQF 742
Query: 659 LSNIAVSGKLEKRYFE 674
LSN + +KR+F+
Sbjct: 743 LSNKVLKDPRQKRFFK 758
>gi|255936215|ref|XP_002559134.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583754|emb|CAP91771.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1116
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 334/644 (51%), Gaps = 123/644 (19%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P EP + +G ++VP I+ L +Q+ GV++L++L++ GGI+GD+MGLGKTIQ
Sbjct: 311 PTEPAMELDNG----LRVPGDISRFLFSYQKTGVQWLWELHQQTVGGIIGDEMGLGKTIQ 366
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH 230
I++LAA+ + + I ++CP+++++ W EF RW F VSI H
Sbjct: 367 AISYLAALHHSKKFTKPAI-------------VVCPATLMKQWVNEFHRWWPPFRVSILH 413
Query: 231 GPNRDMI-----------------------------------LEKLEACGVEVLITSFDS 255
MI ++++ G VL+T++
Sbjct: 414 SSGSGMINIGKESSRENALTSEMMGSHSSRHLSAGQKAAKKIIKRVTEDG-HVLVTTYSG 472
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
+ + L +V W I+DE H+++N + + +C EL+T +RI L+GT MQN +++L++
Sbjct: 473 LQSYADALVDVEWGCAILDEGHKIRNPDAGITFSCKELRTPHRIILSGTPMQNSLVDLWS 532
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD+V P LG F+ ++ P++ G +A ++ A + + L + YLL+R K
Sbjct: 533 LFDFVFPMRLGNLVTFKNQFEIPIRQGGYASASNLQVQTAAKCAETLKDAISPYLLQRFK 592
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
+ L + K + V+FC ++ LQ+ Y+R L +++ +I
Sbjct: 593 ADVTSDLPL-KSEQVIFCKLTQLQRTIYKRFLGSDDMKSIIRG----------------- 634
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
R ++L G D L++ISNH P+ D + R+ A +G
Sbjct: 635 RRNSLYGIDI------------LRKISNH-----PDLADHTLRSRE------ADYG---- 667
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IR 554
D + GKM+ L+ L+ W G K LLF+ MLDI+EKFL +
Sbjct: 668 ---------------DAERSGKMKVLKGLLEVWRDTGHKTLLFTQGRLMLDIIEKFLGVL 712
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
G++ R+DG+TP RQSLV+DFN+ P+ VFL++TR GG+G+NL A+RV+I+DP+WN
Sbjct: 713 GGFNCRRMDGTTPIKERQSLVNDFNNDPNIHVFLLTTRVGGIGVNLTGADRVIIYDPDWN 772
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
P+ DLQA++R++R GQKR V +FRL++ G++EE +Y RQ++KQ L+N ++ F+
Sbjct: 773 PSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKITRDPHQREGFQ 832
Query: 675 GVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQER 718
+L+ + L + D L T+++ + E Q++ +
Sbjct: 833 --------LSDLYDLFTLTDENDDELETTKLFKDAEVTYQEEAK 868
>gi|224052526|ref|XP_002188227.1| PREDICTED: DNA excision repair protein ERCC-6 [Taeniopygia guttata]
Length = 1449
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 311/555 (56%), Gaps = 60/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S+
Sbjct: 454 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSN 510
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H ++ ++ +
Sbjct: 511 MRTRGSNYRYQGLGPTVIVCPATVLHQWVKEFHTWWPPFRVAVLHETGSYTKSKVKLIHE 570
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ +C +LITS+ R+ + +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 571 IASCH-GILITSYSYIRLMQDDIHTYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 629
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 630 LSGSPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTAYKCAC 689
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC +++ Q++ Y+ + E+ ++N D
Sbjct: 690 VLRDTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKEVYQILNGD 749
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ +L L L++I NH + + +PR
Sbjct: 750 MQ-----------------------------ILLGLSTLRKICNHPDFVADSPR------ 774
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ +V PD + A++ + G K GKM +E L+ W +G ++L F+
Sbjct: 775 -----ILKSV--PDAE-----AEDPNQFGY--WKRSGKMIVVESLLKIWHKQGHRVLFFT 820
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +M+ ILE F+ + YS+ R+DG+T RQ LV +N S +FL++TR GG+G+N
Sbjct: 821 QSRQMMQILEVFVRYRNYSYLRMDGTTAVASRQPLVTKYNEDKSIFLFLLTTRVGGIGVN 880
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
LV A+RV+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 881 LVGADRVIIYDPDWNPSVDTQARERAWRIGQKKEVTVYRLLTAGTIEEKIYHRQIFKQFL 940
Query: 660 SNIAVSGKLEKRYFE 674
+N + + R+F+
Sbjct: 941 TNRVLKDPKQNRFFK 955
>gi|367051024|ref|XP_003655891.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
gi|347003155|gb|AEO69555.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
Length = 1161
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 297/567 (52%), Gaps = 105/567 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY + GGI+GD+MGLGKT+Q I+F+AA
Sbjct: 366 LRLPGDIYPSLFDYQKTGVQWLAELYAQQVGGIVGDEMGLGKTVQLISFVAA-------- 417
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
L +K+ K V+++ P++V++ W EF RW VSI H M
Sbjct: 418 ----LHYSKMLHK-PVIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMFNVHDEGEL 472
Query: 237 ---------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
I++++ G VL+T++ + +G IL V+W ++DE
Sbjct: 473 EDHVDDWDNKKPTRSSKAAKKIVDRVVKNG-HVLVTTYAGLQTYGDILIPVDWGYAVLDE 531
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T NRI L+GT MQN + EL++LFD++ P LGT FR +
Sbjct: 532 GHKIRNPNTAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQF 591
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A I A + + L +R YLL+R K + L K + V+FC +
Sbjct: 592 EIPIRLGGYANATNLQIMTAQKCAETLKETIRPYLLQRLKVDVAADLPK-KSEQVLFCKL 650
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S Q+ AY L+ E+ ++N+ +L G D
Sbjct: 651 SRSQREAYELFLKSDEMASILNRTR-----------------QSLYGIDI---------- 683
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L+ P + +P Q DV
Sbjct: 684 --LRKICNHPDLLDPALKTKPGYQ-----------------------------WGDVSKS 712
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSL 574
GKM ++ L+ W G K LLF V+MLDI+E F+ R ++ R+DG TP RQ+L
Sbjct: 713 GKMAVVQSLLPMWKRLGHKTLLFCQGVQMLDIIEAFVRRLDNITYIRMDGKTPVKQRQAL 772
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD FN+ VFL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQKR V
Sbjct: 773 VDQFNTDAGLDVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKREV 832
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RL++AG++EE +Y RQ++KQ L+N
Sbjct: 833 TIYRLMTAGTIEEKIYHRQIFKQFLTN 859
>gi|348507212|ref|XP_003441150.1| PREDICTED: DNA excision repair protein ERCC-6 [Oreochromis
niloticus]
Length = 1436
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 307/555 (55%), Gaps = 60/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV+++++L+ + GGILGD+MGLGKTIQ I+FLA G S
Sbjct: 487 FKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLA---GLSYSK 543
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H N++ ++ +
Sbjct: 544 LRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPLFRVAVLHETGSFTSNKEKLIPE 603
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ AC +LITS+ + R L +W +I+DE H+++N + + +AC + +T +R
Sbjct: 604 IAACH-GILITSYSAVRNMQETLQLYDWHYIILDEGHKIRNPNAGVTVACKQFRTPHRFI 662
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 663 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCAC 722
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + +L + K + V+FC +++ Q++ Y+ L E+ ++N D
Sbjct: 723 VLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQILNGD 782
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L PR
Sbjct: 783 MQVFSG-----------------------------LIALRKICNHPDLFSGGPR------ 807
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ + P+ L E G K GK+ +E L+ W + ++LLF+
Sbjct: 808 -----ILRGI--PEDQLT-----EEEHFGF--WKRSGKLIVVESLLRLWFRQSHRVLLFT 853
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE F+ YS+ ++DG+T + RQ L+ +N S +FL++T+ GGLG+N
Sbjct: 854 QSRQMLDILEVFVRENNYSYLKMDGTTTISSRQPLIARYNEDKSIFIFLLTTKVGGLGVN 913
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQK+ V ++RLL+AG++EE +Y RQ++KQ L
Sbjct: 914 LTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYRLLTAGTIEEKIYHRQIFKQFL 973
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 974 TNRVLKDPKQRRFFK 988
>gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator]
Length = 1005
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 299/558 (53%), Gaps = 56/558 (10%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ +VP SI RL +Q+ V++L++L+ K GG+LGD+MGLGKT+Q IAFLA +
Sbjct: 249 LFKVPQSIWDRLYRYQKIAVQWLWELHGRKLGGLLGDEMGLGKTVQVIAFLAGL------ 302
Query: 186 SDSTILKDN-KVDKKGYVLIICPSSVIQNWEIEFSRWSTF-------NVSIYHGPNRDMI 237
S +L N + G ++ICP ++++ W F W F + Y G D+I
Sbjct: 303 DCSELLSHNGRFRGLGPTIVICPVTLMEQWVKHFHEWWPFVRVVVLHHTGGYKGDPEDLI 362
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
E L+ G+ LI S++ H ++ W VI+DE H ++N + K+ A L+T +
Sbjct: 363 -ESLQTGGI--LIISYNGVLKHKDLIISSQWHYVILDEGHTIRNPQVKISRAVKRLQTPH 419
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTG+ MQN + EL++LFD++ PG LGT F E P+ G + A A +
Sbjct: 420 RLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCASPITRGGYVNATPLQEATALQ 479
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L + YLLRRTK + HL + K + V+FC+++D QK+ Y++ L
Sbjct: 480 VATMLKDTITPYLLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYL--------- 530
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
C ++ + K + G F + L L K I NH P
Sbjct: 531 -------CSEDVSFILHEKTNHHESGRYRARFLIALSALRK---ICNH-----------P 569
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D +L S DIDL E K GKM + L+ W +G ++L
Sbjct: 570 DLFLYTRQLDSE---EDIDL-----SEELLEKFGYWKRAGKMTVVRSLLKIWQKQGHRVL 621
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LF+ ++M+ ILE L +GY++ RLDGST + RQ ++ FN++PS VFL++TR GGL
Sbjct: 622 LFTQGIQMIHILESLLQHEGYTYLRLDGSTAMSQRQHVIQMFNNNPSYFVFLLTTRVGGL 681
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL ANRV+I+DP+WNPA D QA+ R++R GQ + V ++RL++AG++EE +Y RQ++K
Sbjct: 682 GLNLTGANRVIIYDPDWNPATDAQARARAWRIGQNKQVTIYRLITAGTIEEKMYHRQIFK 741
Query: 657 QQLSNIAVSGKLEKRYFE 674
LSN + ++R F+
Sbjct: 742 LLLSNKVLDEPRQRRLFK 759
>gi|402072696|gb|EJT68413.1| DNA repair and recombination protein RAD26, partial [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1071
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 308/587 (52%), Gaps = 106/587 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +L++ GGI+GD+MGLGKT+Q I+F+AA+
Sbjct: 358 LKLPGDIYPALFDYQKTGVRWLSELFEQNVGGIVGDEMGLGKTVQLISFVAALH------ 411
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI-------L 238
K+ + V+++ P+++++ W EF RW VSI H M+ L
Sbjct: 412 -----YSQKLTRP--VIVVAPATLLRQWVNEFHRWWPPLRVSILHSSGSGMLDVRSEGRL 464
Query: 239 EKLEACGVE-------------------------VLITSFDSYRIHGSILSEVNWEIVIV 273
E E + VL+T++ + +G IL V W+ ++
Sbjct: 465 EDDELSSSDEEAPKKKRGAKAAKKIVDRVVKDGHVLVTTYAGLQAYGGILIPVEWDYAVL 524
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + L + C EL+T NR+ L+GT +QN ++EL++LFD++ P LGT FR
Sbjct: 525 DEGHKIRNPNTALTVYCKELRTANRVILSGTPIQNNLVELWSLFDFIYPMRLGTLHEFRN 584
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+ P++ G A I A + + L + YLL+R K + L K + V+FC
Sbjct: 585 NIEIPIRLGGYANATNLQIMTAQKCAETLKDAISPYLLQRVKADVAADLPK-KSEQVLFC 643
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ +Q+ AY + L E+ ++N G
Sbjct: 644 RLTQIQRSAYEQFLSSKEMDQILNGTRKSFFG---------------------------- 675
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
+ +L+++ NH +L+ P+ R +P S+ S K
Sbjct: 676 -IDQLRKVCNHPDLLDPSVRGDP----------------------------SYRWGSASK 706
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-GYSFSRLDGSTPSNLRQ 572
S GKM+ ++ L++ W G K LLFS +MLDILE F+ R+ G + R+DG TP RQ
Sbjct: 707 S-GKMQVVKALLHMWKRFGHKTLLFSQGTQMLDILEAFVRRQDGIRYLRMDGRTPIKDRQ 765
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
+LVD FN++P +FL++T+ GGLG+NL A+RV+IFDP+WNP+ D+QA++R++R GQK+
Sbjct: 766 TLVDQFNNTPELDIFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARERAWRLGQKK 825
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDC 679
V ++RL++AG++EE +Y RQ++KQ L+N + ++ F +QD
Sbjct: 826 EVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRNGFATMQDL 872
>gi|443708226|gb|ELU03433.1| hypothetical protein CAPTEDRAFT_20149 [Capitella teleta]
Length = 777
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/536 (33%), Positives = 300/536 (55%), Gaps = 66/536 (12%)
Query: 148 LYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICP 207
+++L+ K GGILGD+MGLGKTIQ IAFLA + E+S + ++++ G L+ICP
Sbjct: 1 MWELHCQKAGGILGDEMGLGKTIQVIAFLAGL----ENSQLALGRESR--GLGPSLVICP 54
Query: 208 SSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILEKLEACGVEVLITSFDSYRIHG 260
++V+ W EF +W V++ H G ++I + A G+ L+T++ S +H
Sbjct: 55 TTVLHQWVKEFHKWWPQRRVAVLHHSGSYSGSEVNLIRSIIGAKGI--LVTAYSSVLLHQ 112
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
+L +W I+DE H+++N +++ +AC +LKT +R+ L+G+ +QN + EL++LFD++
Sbjct: 113 DLLLPQSWHYAILDEGHKIRNPNAQITVACKQLKTCHRVILSGSPVQNNLKELWSLFDFI 172
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LGT F + + P+ G A + ++ A + L + YLLRR K +
Sbjct: 173 FPGKLGTLPDFMQHFSVPIVQGGYSNATQVAVQTAYKCACVLRDTINPYLLRRMKADVKE 232
Query: 381 HLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L + K + V+FC +++ Q+ Y+ L E +++
Sbjct: 233 SLSLPAKNEQVLFCRLTEHQREVYKEYLDSKECNSILSGGF------------------- 273
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
+V P LV L+++ NH +L P ++F D
Sbjct: 274 ----------MVFPGLVTLRKVCNHPDLSTGGP---------------SLFHVD------ 302
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSF 559
+ + E+ K GKM+ L+ L+ W + ++LLFS S +ML+IL+ ++ +GY +
Sbjct: 303 DEEEEAAKKFGFWKRSGKMQVLDPLLRLWKKQNHRVLLFSQSRQMLEILQSYVEERGYVY 362
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DG TP + RQ L++ FN PS +FL++TR GGLG+NL ANRVVI+DP+WNP+ DL
Sbjct: 363 RRMDGGTPISARQPLINSFNEDPSVFIFLLTTRVGGLGINLTGANRVVIYDPDWNPSTDL 422
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
QA++R++R GQ + V V+RLL+AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 423 QARERAWRIGQLKDVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKA 478
>gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR]
Length = 1276
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 327/634 (51%), Gaps = 119/634 (18%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 415 DGGY---RIPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLH 471
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--- 236
+ + S V+++CP +V++ W EF RW + F VSI H M
Sbjct: 472 HSKKLTKS-------------VIVVCPPTVMKQWVNEFHRWWAPFRVSILHSSGSGMVNL 518
Query: 237 --------------------------------ILEKLEACGVEVLITSFDSYRIHGSILS 264
IL+++ G VL+T++ + + S+L
Sbjct: 519 RSESFADARLESQLWEPDQPRRLPKEQKAAKRILKRVLEEG-HVLVTTYSGLQTYRSLLI 577
Query: 265 EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS 324
V+W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+ P
Sbjct: 578 PVDWGCAILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMR 637
Query: 325 LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM 384
LGT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 638 LGTLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK 697
Query: 385 GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCD 444
K + V+FC ++ LQ+ AY L E+ ++ R + L G D
Sbjct: 698 -KSEQVLFCKLTKLQRSAYEAFLGSNEMSSILRG-----------------RREALYGID 739
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
L++I NH +L P + ++ SA
Sbjct: 740 ------------MLRKICNHPDL----PEHKVLSKKPSYNYGSA---------------- 767
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLD 563
GKM+ ++ L+ W G K LLF+ MLDILE+F+I G+ + R+D
Sbjct: 768 --------SKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMD 819
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
G+TP RQ +VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++
Sbjct: 820 GNTPIKFRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARE 879
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQ 683
R++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D
Sbjct: 880 RAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ-MSDLH--- 935
Query: 684 GELFGICNLFRDLSDN--LFTSEIIESHEEQGQQ 715
+LF + N R ++ LF + + E +G Q
Sbjct: 936 -DLFTLGNDGRTETETSELFKNVEVTFQESKGAQ 968
>gi|119487132|ref|XP_001262421.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
181]
gi|119410578|gb|EAW20524.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
181]
Length = 1214
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 302/570 (52%), Gaps = 110/570 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P +N L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQTIAFLA +
Sbjct: 411 RLPGDLNPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQTIAFLAGLH------- 463
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGV 246
K+D G V+++CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 464 ----YSKKLD--GPVIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRSESSRE 517
Query: 247 E---------------------------------VLITSFDSYRIHGSILSEVNWEIVIV 273
+ VL+T++ + + L V W I+
Sbjct: 518 DALLAQTYSSSSRGFTSNQKAARKVVKRVVEEGHVLVTTYSGLQTYSHFLIPVEWGCAIL 577
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 578 DEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 637
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P++ G A ++ A + + L + YLL+R K + L K + V+FC
Sbjct: 638 QFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KTEQVLFC 696
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ Q+ AY L+ E++ ++ R L G D
Sbjct: 697 KLTKPQRMAYESFLKSEEMESILKG-----------------RRQILYGVDI-------- 731
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF-IGLSDV 512
L++I NH PD Q N + +S +G +
Sbjct: 732 ----LRKICNH-----------PDLQ--------------------NHKLQSHQLGYGNA 756
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G++ R+DG+TP R
Sbjct: 757 NKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNHRRMDGTTPIQNR 816
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q++VD+FN+ P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 817 QTMVDEFNNDPNIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 876
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
R V V+RL++AG++EE +Y RQ++KQ L+N
Sbjct: 877 RDVSVYRLMTAGTIEEKIYHRQIFKQFLTN 906
>gi|361131939|gb|EHL03554.1| putative DNA repair and recombination protein RAD26 [Glarea
lozoyensis 74030]
Length = 1207
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/696 (30%), Positives = 346/696 (49%), Gaps = 125/696 (17%)
Query: 72 REKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYP-IIQVP 130
R KA VEK + + ++ +Q + ++ Q D F P + D ++ I++P
Sbjct: 365 RLKAWVEKRSA----ARRRKLQQNQGSEEEVVAEQADEEEWFRPCPDAPDHQFDNDIKLP 420
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
I L ++Q+ GV++L +LY GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 421 GDIYPALFDYQKTGVQWLGELYSQSVGGIVGDEMGLGKTIQIISFLAGLH---------- 470
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM------------- 236
K+ K ++++ P++V++ W EF RW VSI H M
Sbjct: 471 -YSKKLTKP--IIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVGREEKYEEID 527
Query: 237 --------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
I++++ G VL+T++ + + +L V W+ ++DE
Sbjct: 528 EMYTGHTTKKPSKSSRSAQKIVDRVVEHG-HVLVTTYAGLQTYADVLIPVEWDYAVLDEG 586
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
H+++N + + + C EL+T NR+ L+GT MQN ++EL++LFD+V P LGT +FR+ ++
Sbjct: 587 HKIRNPNTGITIHCKELRTPNRVILSGTPMQNNLVELWSLFDFVFPMRLGTLVNFRQAFE 646
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
P++ G A + A + + L A + YLL+R K + L K + V+FC ++
Sbjct: 647 VPIRLGGYANATNLQVLTATKCAETLKATISPYLLQRLKVDVAADLPK-KSEQVLFCKLT 705
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
Q+ AY L E+ ++N K L +D
Sbjct: 706 KPQREAYEMFLSSDEMTSILN--------------HSRKSLYGID--------------- 736
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
L++I NH +L+ P R +P + GN G
Sbjct: 737 ILRKICNHPDLLDPRLRGKPGYK------------------WGNPNK-----------SG 767
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLV 575
KM+ ++ L+ W + G K LLFS V+ML+I+E+F+ G+++ R+DG T RQ+LV
Sbjct: 768 KMQVVKALVQMWKNMGHKTLLFSQGVQMLNIIEEFIKSLDGFNYLRMDGGTNVKDRQTLV 827
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D FN+ P +FL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQK+ V
Sbjct: 828 DRFNNDPDMHIFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKEVT 887
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE-----------GVQDCKEFQG 684
+FRL++AG++EE +Y RQ++KQ L+N + +++ F+ +D G
Sbjct: 888 IFRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMKDLYDLFSLGSTEDGTTETG 947
Query: 685 ELF-GICNLFRDLSDNLFTSEIIESHEEQGQQQERH 719
E+F G F SDN+ ++ ++E H
Sbjct: 948 EMFKGTEVQFNQTSDNVTADAANNANPPVAVKKEAH 983
>gi|320581583|gb|EFW95803.1| DNA dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 1003
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 308/581 (53%), Gaps = 105/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I L ++QR GV++L++LY +K GGI+GD+MGLGKT+Q I+FLA +
Sbjct: 251 RVPGDIYPSLFDYQRTGVQWLWELYSHKTGGIIGDEMGLGKTVQVISFLAGLH------- 303
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------- 237
K+ K VL++CP++V+ W EF RW V I H M
Sbjct: 304 ----YSGKLTKP--VLVVCPATVLSQWCKEFHRWWPALRVVILHSIGTGMTGKRVEDSDD 357
Query: 238 ------LEKLEACGV------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
L L + G V+IT++ RI+ L V W V++DE H++
Sbjct: 358 DEEDADLSSLPSDGRAKELVDSVINNGHVIITTYVGVRIYSRYLLPVRWNYVVLDEGHKI 417
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N S + +AC +LKT NRI L+GT +QN ++EL++LFD+V PG LGT F++ + P+
Sbjct: 418 RNPDSHVTLACKQLKTPNRIILSGTPIQNNLVELWSLFDFVFPGRLGTLPVFQKQFCVPI 477
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
G A ++ + L ++ YLLRR K + + + K + V+FC ++D+Q
Sbjct: 478 NIGGYANATNVQVQTGYKCAVILRDLISPYLLRRVKAD-VAKDLPKKSEMVLFCKLTDVQ 536
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++ Y L +I ++ + + L G D L+
Sbjct: 537 RKLYEDFLNSEDINKILRG-----------------KRNALFGIDV------------LR 567
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ R K ++ AE A GK++
Sbjct: 568 KICNHPDLVDLKLRK---KHQRTAEQLEA-------------------------RAGKLQ 599
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFL------IRKGYSFSRLDGSTPSNLRQS 573
+ L+ W S+G K L+F+ + +MLDIL+ F+ +SF R+DG+TP + RQS
Sbjct: 600 VVHALLDVWFSEGRKTLIFTQTRQMLDILQDFMEALNYETESKFSFMRMDGTTPISQRQS 659
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD FN++P VFL++TR GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK+
Sbjct: 660 MVDQFNTNPMYNVFLLTTRVGGLGVNLTGASRVIIYDPDWNPSTDVQARERAWRLGQKKD 719
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V+++RL+ AGS+EE +Y RQ++KQ L+N + +KR+F+
Sbjct: 720 VVIYRLMMAGSIEEKIYHRQIFKQLLTNKILKDPKQKRFFK 760
>gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293]
gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
Af293]
gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
A1163]
Length = 1214
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 301/569 (52%), Gaps = 108/569 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P +N L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 411 RLPGDLNPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQAIAFLAGLH------- 463
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+D+ V+++CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 464 ----YSKKLDRP--VIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRSESSRE 517
Query: 245 -------------GV------------------EVLITSFDSYRIHGSILSEVNWEIVIV 273
G+ VL+T++ + + L V W I+
Sbjct: 518 DALLSQTYSSNSRGITSNQKAARKVVKRVVEEGHVLVTTYSGLQTYSHFLIPVEWGCAIL 577
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 578 DEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRN 637
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P++ G A ++ A + + L + YLL+R K + L K + V+FC
Sbjct: 638 QFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KTEQVLFC 696
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ Q+ AY L+ E++ ++ R L G D
Sbjct: 697 KLTKPQRMAYESFLKSEEMESILKG-----------------RRQILYGVDI-------- 731
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L++I NH PD Q + + +G +
Sbjct: 732 ----LRKICNH-----------PDLQNHKMQSHQSGYG-------------------NAN 757
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQ 572
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG+TP RQ
Sbjct: 758 KSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNYRRMDGTTPIQNRQ 817
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
++VD+FN+ P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 818 TMVDEFNNDPNIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKR 877
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
V V+RL++AG++EE +Y RQ++KQ L+N
Sbjct: 878 DVSVYRLMTAGTIEEKIYHRQIFKQFLTN 906
>gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
Length = 1544
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 330/601 (54%), Gaps = 89/601 (14%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L E+Q GV++LY+L+ + GGI+GD+MGLGKTIQ ++FLA++
Sbjct: 718 KIPFDIYKNLFEYQVTGVRWLYELHCQEAGGIVGDEMGLGKTIQIVSFLASLHYSRRLG- 776
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN----RDMILEKLE 242
G LI+ P++++ NW EF +W F V ++H + +D I++K+
Sbjct: 777 ------------GPALIVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKKIA 824
Query: 243 ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
+ G +L+T+F+ RIH IL E +W+ VI+DE H+++N +++ ++C + +T +RI L+
Sbjct: 825 SKG-HILLTTFEQIRIHQDILLEHHWDYVILDEGHKIRNPDAEVTLSCKQFQTCHRIILS 883
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
G+ +QNK+ EL++LFD+V PG LGT F+ + P+ G A ++ A + L
Sbjct: 884 GSPIQNKLTELWSLFDFVYPGKLGTLPIFKTQFSLPISVGGFANASPIQVQTAYKCAVAL 943
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
++ Y+LRR K + + L K + V+ C +++ Q++ Y L +I+ ++
Sbjct: 944 RDLISPYMLRRIKADVLKSL-PSKNEQVLMCPLTNFQEKLYLEFLDSNDIKSVLE----- 997
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
R + L G D L++ISNH +++ +P DE +
Sbjct: 998 ------------GRRNALYGIDI------------LKKISNHPDILHMDPHDEDRPE--- 1030
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
++ K+R +++++ W +GDK+LLF +
Sbjct: 1031 -------------------------DYGNINRSAKLRVVDQILPLWYKQGDKVLLFCQTR 1065
Query: 543 RMLDILEKFLIRKGYSFS--RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
+MLDI+E + IR +F+ R+DG+T RQSLV++FN +FL++T+ GGLGLNL
Sbjct: 1066 QMLDIVEAY-IRNSTTFNYLRMDGTTSVKHRQSLVEEFNLDEKLFIFLLTTKVGGLGLNL 1124
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
ANRV++FDP+WNP+ D QA++R +R GQK+ V ++RL++ G++EE +Y RQ+YKQ L+
Sbjct: 1125 TGANRVILFDPDWNPSTDTQARERVYRIGQKKSVTIYRLVTLGTIEEKIYHRQIYKQFLT 1184
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFT---SEIIESHEEQGQQQ 716
N + +KR+F+ K F+ ELF + + N+F+ SEI+ H + +
Sbjct: 1185 NKILKDPRQKRFFK----SKHFK-ELFTYSKSNKGSETGNIFSESNSEILPEHMKDSDNE 1239
Query: 717 E 717
E
Sbjct: 1240 E 1240
>gi|390359838|ref|XP_780898.3| PREDICTED: DNA excision repair protein ERCC-6, partial
[Strongylocentrotus purpuratus]
Length = 1004
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 299/558 (53%), Gaps = 75/558 (13%)
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
+++ + +Q+ GVK+L++L++ K GGILG +MGLGKTI+ IAFLA
Sbjct: 43 SALPSKGFRYQKIGVKWLWELHRQKAGGILGHEMGLGKTIEMIAFLAG------------ 90
Query: 191 LKDNKVDKKGY-------VLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMI 237
L+ + + KG+ VLI+CP++V+ W EF W + + S H R+ +
Sbjct: 91 LRTSALPSKGFSYRGLGPVLIVCPATVLHQWLKEFHTWYPEIRVAILHESGSHSGKRESL 150
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + A VLITSF + R+ +L NW VI+DE H+++N +++ +AC + +T +
Sbjct: 151 VRDM-ASSHGVLITSFSTVRLRQEMLLRYNWHYVILDEGHKIRNPDAEVTLACKQFRTPH 209
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTG+ MQN + EL++L D+V PG LGT F + + P+ G A + ++ A +
Sbjct: 210 RLILTGSPMQNNLRELWSLIDFVFPGKLGTLPVFMQQFSVPIVQGGYANASKVQVQTAYK 269
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L + YLLRR K + L + K + V+FC +++ Q + Y L E ++
Sbjct: 270 CACILRDSVSPYLLRRLKADVKQALQLPSKNEQVLFCHLTEEQTQVYEEYLASKECNLIL 329
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+ G L+ L++I NH +L+ PR
Sbjct: 330 RGEYKVFAG-----------------------------LITLRKICNHPDLVSGGPRIFS 360
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
+ D +L E G K GKM +E L+ W + ++L
Sbjct: 361 HQNLSDEDLT----------------EEQRYGY--YKRAGKMIVVESLLKLWKEQNHRVL 402
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LFS S +MLDI+E F ++ YS+ R+DG+T + RQ L+ FNS P +FL++TR GGL
Sbjct: 403 LFSQSKQMLDIMEDF-VKDRYSYMRMDGTTTISSRQPLITKFNSDPRIFLFLLTTRVGGL 461
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL ANRV+I+DP+WNP+ D QA++RS+R GQ + V ++RLL+AGS+EE +Y RQ++K
Sbjct: 462 GVNLTGANRVIIYDPDWNPSTDTQARERSWRIGQTKQVTIYRLLTAGSIEEKIYHRQIFK 521
Query: 657 QQLSNIAVSGKLEKRYFE 674
L+N + ++R+F+
Sbjct: 522 TFLTNRVLKDPRQRRFFK 539
>gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
Length = 982
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 301/544 (55%), Gaps = 68/544 (12%)
Query: 140 HQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKK 199
+Q+ GV++L++L++ GGI+GD+MGLGKTIQTIAF A + S+ L D+
Sbjct: 2 YQQTGVRWLWELHRQNTGGIVGDEMGLGKTIQTIAFFAGL----HHSNLRTLGDS-FQGL 56
Query: 200 GYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILEKLEACGVEVLITS 252
G V++ICP++V+ W EF RW V+I H G ++ + GV L+TS
Sbjct: 57 GPVVLICPTTVMHQWVREFHRWYPPVRVAILHDSGSFAGSKETLVRQVNRDRGV--LVTS 114
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
+ +L W V++DE H+++N ++ +AC + +T +RI L+G+ +QN + E
Sbjct: 115 YAGVSKLSPMLLRHEWHYVVLDEGHKIRNPDAQTTLACKQFRTTHRIILSGSPIQNNLRE 174
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L++LFD+V PG LGT F + + P+ G A + ++ A + L ++ YLLR
Sbjct: 175 LWSLFDFVFPGKLGTLPVFMQEFAVPITQGGYSNATD--VQTAYKCASVLRDTIKPYLLR 232
Query: 373 RTKEETIGHLMMGKED-NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
R K++ +L + K++ V+FC ++D Q+ YR+ L PEI ++ L G
Sbjct: 233 RMKDDVQCNLQLPKKNEQVLFCRLTDHQRDLYRQYLDTPEIASILVGRLQVFVG------ 286
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
L+ L++I NH +L P+ VF
Sbjct: 287 -----------------------LINLRKICNHPDLFDGGPK---------------VFK 308
Query: 492 PDIDLVGGNAQNE-SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D DL A+ F G S GKM +E L+ W +G ++LLF+ S +ML ILEK
Sbjct: 309 -DTDLSTLPAEMRYGFPGRS-----GKMAVVESLLKLWKRQGHRVLLFTQSRQMLLILEK 362
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
F+ +GY + + GSTP RQ ++ FN+ S VFL++TR GGLG+NL A+RVVI+D
Sbjct: 363 FVQDQGYKYMVMTGSTPIASRQPAINKFNADTSVFVFLLTTRVGGLGVNLTGADRVVIYD 422
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK 670
P+WNP+ D QA++R++R GQ R V ++RLL+AG++EE +Y RQ++KQ L+N + ++
Sbjct: 423 PDWNPSTDTQARERAWRIGQLRDVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 482
Query: 671 RYFE 674
R+F+
Sbjct: 483 RFFK 486
>gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
Length = 1233
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/591 (32%), Positives = 312/591 (52%), Gaps = 113/591 (19%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y Q+P I L ++Q+ GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 382 DGGY---QLPGDIYPYLFDYQKTGVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGLH 438
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDMILE 239
+ KG ++++CP +V++ W EF W F VSI H M+
Sbjct: 439 YSKKL-------------KGPIIVVCPPTVMKQWVNEFHDWWPPFRVSILHTSGIGMVNL 485
Query: 240 KLEACGVE---------------------------------VLITSFDSYRIHGSILSEV 266
K E+ + VL+T++ + + S+L V
Sbjct: 486 KSESQAEDRYTSGAWGDRNSTSQRGGKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPV 545
Query: 267 NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLG 326
+W I ++DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P LG
Sbjct: 546 DWGIAVLDEGHKIRNPDTSITIHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLG 605
Query: 327 TREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGK 386
T +FR ++ P++ G A ++ A + + L + YLL+R K + L K
Sbjct: 606 TLVNFRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-K 664
Query: 387 EDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSC 446
+ V+FC ++ +Q+ AY L E+ ++ R + L G D
Sbjct: 665 SEQVLFCKLTKVQRAAYEAFLASGEMSSILRG-----------------RREALYGID-- 705
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
L++I NH +L Q K L + D + G
Sbjct: 706 ----------MLRKICNHPDLT----------QHKTLSLKT-----DYNYGSG------- 733
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY---SFSRLD 563
GKM+ ++ L+ W G K LLF+ MLDILE+F+ +G+ ++ R+D
Sbjct: 734 ------AKSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFI--RGFDRFNYRRMD 785
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
G+TP +RQ++VD+FN+ PS VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++
Sbjct: 786 GNTPIKVRQTMVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARE 845
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 846 RAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 896
>gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
Length = 1275
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 324/628 (51%), Gaps = 116/628 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ GV++L++LY+ K GGI+GD+MGLGKTIQ IAFLA + + +
Sbjct: 418 FRIPGDIYPYLFDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQVIAFLAGLHHSKKLT 477
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
S V+++CP +V++ W EF RW + F VSI H M
Sbjct: 478 KS-------------VIVVCPPTVMKQWVNEFHRWWAPFRVSILHSSGSGMVNLRSESFA 524
Query: 237 --------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
IL+++ G VL+T++ + + S+L V+W
Sbjct: 525 DARLESQLWEPDQPRRLPKEQKAAKRILKRVLEEG-HVLVTTYSGLQTYRSLLIPVDWGC 583
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+ P LGT +
Sbjct: 584 AILDEGHKIRNPDTAITIHCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLGTLVN 643
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
FR ++ P++ G A ++ A + + L + YLL+R K + L K + V
Sbjct: 644 FRNQFEFPIRTGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQV 702
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+FC ++ LQ+ AY L E+ ++ R + L G D
Sbjct: 703 LFCKLTKLQRSAYEAFLGSNEMSSILRG-----------------RREALYGID------ 739
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH +L P + ++ SA
Sbjct: 740 ------MLRKICNHPDL----PEHKVLSKKPSYNYGSA---------------------- 767
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSN 569
GKM+ ++ L+ W G K LLF+ MLDILE+F+I G+ + R+DG+TP
Sbjct: 768 --SKSGKMQVVKSLLELWRDTGHKTLLFTQHRIMLDILERFIISMGGFKYQRMDGNTPIK 825
Query: 570 LRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
RQ +VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R G
Sbjct: 826 FRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLG 885
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGI 689
QKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ + D +LF +
Sbjct: 886 QKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ-MSDLH----DLFTL 940
Query: 690 CNLFRDLSDN--LFTSEIIESHEEQGQQ 715
N R ++ LF + + E +G Q
Sbjct: 941 GNDGRTETETIELFKNVEVTFQESKGAQ 968
>gi|449666890|ref|XP_002155441.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
magnipapillata]
Length = 1025
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/552 (34%), Positives = 304/552 (55%), Gaps = 60/552 (10%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P + +L ++QR GV++L++L+ + GGI+GD+MGLGKTIQ I+FLA + S
Sbjct: 258 LPRKLWNKLYKYQRVGVRWLWQLHAQEVGGIVGDEMGLGKTIQVISFLAGLV----YSKK 313
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNR----DMILEKLEA 243
+N G VLI+CP++V+ W EF W F V+I H + L + +
Sbjct: 314 GNNINNNKFGLGSVLIVCPATVMFQWVSEFHMWWPHFRVAILHSSGTFIGSPLTLIRAIS 373
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+LIT+++S H L + NW+ VI+DE H+++N + + +AC + T +R+ LTG
Sbjct: 374 KHPGILITTYNSVLNHKKELYKHNWQYVILDEGHKIRNPDALITLACKQFNTSHRLILTG 433
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T MQN + EL++LFD+V PG LGT F + P+ G A ++ A + L
Sbjct: 434 TPMQNSLKELWSLFDFVYPGRLGTLPVFMAEFSIPITMGGYANASSLQVQAAYKCCCILK 493
Query: 364 AVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ Y++RR K++ L + K + ++FC +++ QK Y+ + ++ ++N D+
Sbjct: 494 DTITPYMIRRMKKDVQQTLFLPTKSEQILFCKLTEEQKAIYKEFISSRDVASILNGDMK- 552
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+ P L+KL++I NH +L+ E + K
Sbjct: 553 ----------------------------IFPGLIKLRKICNHPDLVSLAAEVE---KGKP 581
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
A L A S G K GKM +E L+ W +G ++LLF+ S
Sbjct: 582 ASLDDA----------------SCYGF--WKRSGKMIVVENLLRMWKHQGHRVLLFTQSK 623
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVS 602
+MLDILE FL +S+ R+DG+T R +V F+ S + VFL++TR GGLGLNL++
Sbjct: 624 QMLDILEGFLKAAEHSYMRMDGTTSVKSRHGIVKKFHESKNIFVFLLTTRVGGLGLNLIA 683
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
ANRV+I+DP+WNP+ D QA++RS+R GQ + V ++RLL+ G++EE +Y RQ++KQ L+N
Sbjct: 684 ANRVIIYDPDWNPSVDSQARERSWRIGQLKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNR 743
Query: 663 AVSGKLEKRYFE 674
++ ++R+F+
Sbjct: 744 VLTNPYQRRFFK 755
>gi|321265706|ref|XP_003197569.1| helicase domain DNA excision repair protein (Rad26L) [Cryptococcus
gattii WM276]
gi|317464049|gb|ADV25782.1| Helicase domain DNA excision repair protein (Rad26L), putative
[Cryptococcus gattii WM276]
Length = 1016
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 209/601 (34%), Positives = 318/601 (52%), Gaps = 52/601 (8%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
P VL D E I++PASIN L E+QR G KFLY YK G +LGDDMGLGKT+Q I+
Sbjct: 225 PFVL--DQETKDIRIPASINRFLREYQRAGAKFLYDAYKQGRGAVLGDDMGLGKTVQIIS 282
Query: 175 FLAAVFGK-----DESSDSTILKDNKVDKK----GYVLIICPSSVIQNWEIEFSRWSTFN 225
FL+A+ K D +++ +D LIICP S+I N W F
Sbjct: 283 FLSAIMRKTGTYLDHQRRKRTIREGVMDMSPRHWPTALIICPKSLISN-------WGYFE 335
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+++ N + +K ++++ S+D R+ + ++ VIVDEAHRLK S+
Sbjct: 336 YAVWKSDNWRDVQQKFIHGYLDLI--SYDVARLDIQHIKDLPLSTVIVDEAHRLKEPMSQ 393
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+A ++ + LTGT++QN+I E++++ D+V G GT ++EF P+K G ++
Sbjct: 394 TTLALKSIQCQVCFALTGTLVQNRIDEMWSVLDFVNRGWAGTYRQWKEFAVSPIKKGHQV 453
Query: 346 --TAPE--RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
TA E R I Q +L + LRR K + I H + K+D VVFC ++ Q
Sbjct: 454 EGTAAEVVRAIMTIGVMTQR---ILPHFYLRRDK-KLIAHELPEKKDLVVFCPLASRQIV 509
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
AYR L++ ++ + ++ PC CGS + CC+ + + ++ L L+++
Sbjct: 510 AYRALIESDDVVNIQARNRPCPCGSGKRAILCCEEKEQNNNMKE----ILFQYLSALRKV 565
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
+NH L+ + D + + +L G + E+ D ++CGK L
Sbjct: 566 ANHFGLLYDHKDDNQHTRMVNRKLFKICTGHEPASRSDYTLEEAL----DPENCGKWDLL 621
Query: 522 EKLMYSWASK--GDKILLFSYSVRMLDILEKFLIR----KGYSFSRLDGSTPSNLRQSLV 575
+KL+ W ++ +K+L+FS SVR+L I+ +F+ G+ F L G + RQ ++
Sbjct: 622 KKLLIQWRNEPVKNKVLIFSTSVRLLKIISRFISTSPSLSGFEFDALTGEASAVERQEMI 681
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D F + LISTRAGG+GLNL +AN+VVIFDP+W DR+FR GQKR V
Sbjct: 682 DRFQDREKDHFIMLISTRAGGVGLNLTAANKVVIFDPSW-------TMDRAFRIGQKRTV 734
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF--QGELFGICNL 692
V+RL+ G++EEL+Y RQV KQQ + +G LE R ++G Q ELFG+ NL
Sbjct: 735 EVYRLIGQGTIEELIYERQVQKQQSARQLNNGTLEPRIYQGYDRATNVKDQAELFGVHNL 794
Query: 693 F 693
F
Sbjct: 795 F 795
>gi|392867317|gb|EAS29452.2| DNA repair and recombination protein RAD26 [Coccidioides immitis
RS]
Length = 1213
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 308/590 (52%), Gaps = 110/590 (18%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 397 DGGY---RIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLH 453
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILE 239
K+D ++++CP +V++ W EF RW VSI H MI
Sbjct: 454 -----------YSKKLDAP--IIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINI 500
Query: 240 KLEACGVE----------------------------------VLITSFDSYRIHGSILSE 265
K E+ + VL+T++ + + S+L
Sbjct: 501 KKESRAEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIP 560
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 561 VDWGCAILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRL 620
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 621 GTLVNFRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK- 679
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC ++ LQ+ AY L E+ ++ R D L G D
Sbjct: 680 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRG-----------------RRDVLFGVDI 722
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L P + Q+ + ++
Sbjct: 723 ------------LRKICNHPDL----PEHKTLSQKANYNYGNSA---------------- 750
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDG 564
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG
Sbjct: 751 --------KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDG 802
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP +RQ +VD+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ DLQA++R
Sbjct: 803 NTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQARER 862
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 863 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 912
>gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 1198
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 308/590 (52%), Gaps = 110/590 (18%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 382 DGGY---RIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLH 438
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILE 239
K+D ++++CP +V++ W EF RW VSI H MI
Sbjct: 439 -----------YSKKLDAP--IIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINI 485
Query: 240 KLEACGVE----------------------------------VLITSFDSYRIHGSILSE 265
K E+ + VL+T++ + + S+L
Sbjct: 486 KKESRAEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIP 545
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 546 VDWGCAILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRL 605
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 606 GTLVNFRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK- 664
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC ++ LQ+ AY L E+ ++ R D L G D
Sbjct: 665 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRG-----------------RRDVLFGVDI 707
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L P + Q+ + ++
Sbjct: 708 ------------LRKICNHPDL----PEHKTLSQKANYNYGNSA---------------- 735
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDG 564
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG
Sbjct: 736 --------KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDG 787
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP +RQ +VD+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ DLQA++R
Sbjct: 788 NTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQARER 847
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 848 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 897
>gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS]
Length = 1198
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 308/590 (52%), Gaps = 110/590 (18%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 382 DGGY---RIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLH 438
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILE 239
K+D ++++CP +V++ W EF RW VSI H MI
Sbjct: 439 -----------YSKKLDAP--IIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINI 485
Query: 240 KLEACGVE----------------------------------VLITSFDSYRIHGSILSE 265
K E+ + VL+T++ + + S+L
Sbjct: 486 KKESRAEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIP 545
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 546 VDWGCAILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRL 605
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 606 GTLVNFRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK- 664
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC ++ LQ+ AY L E+ ++ R D L G D
Sbjct: 665 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRG-----------------RRDVLFGVDI 707
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L P + Q+ + ++
Sbjct: 708 ------------LRKICNHPDL----PEHKTLSQKANYNYGNSA---------------- 735
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDG 564
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG
Sbjct: 736 --------KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDG 787
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP +RQ +VD+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ DLQA++R
Sbjct: 788 NTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQARER 847
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 848 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 897
>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
Length = 1117
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 317/614 (51%), Gaps = 101/614 (16%)
Query: 89 EKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPI---IQVPASINCRLLEHQREGV 145
E+ E K R + G + +GP + +Y I +++P I+ L +Q+ GV
Sbjct: 301 ERRSEARKQRRSEAGDTSVEPSGPEWSKPSPDEEDYVINDDLRLPGDIHPSLFSYQKTGV 360
Query: 146 KFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLII 205
++L +LY GGI+GD+MGLGKT+Q IAF+AA+ K+ K V+I+
Sbjct: 361 QWLAELYSQNVGGIVGDEMGLGKTVQAIAFIAALH-----------YSKKLTKP--VIIV 407
Query: 206 CPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI-----------------------LEKL 241
P++V++ W EF RW VSI H MI ++++
Sbjct: 408 APATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHSGRRDKSVRKIVDRV 467
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G VL+T+++ + + L V W+ ++DE H+++N +++ + C EL+T NRI L
Sbjct: 468 VKHG-HVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEITVLCKELRTPNRIIL 526
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + EL++LFD++ P LGT FR ++ P+K G A I A++ +
Sbjct: 527 SGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAET 586
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + +YLL+R K + L K + V+FC M+D Q AY++ L N D
Sbjct: 587 LKEAISQYLLQRLKIDVAADL-PSKTERVLFCKMTDRQLEAYKQFL---------NSD-- 634
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ Q+ +R +L G D L++I NH +LI P
Sbjct: 635 -----AVNQILSARR-KSLYGIDI------------LRKICNHPDLIDP----------- 665
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ QN++ D + GKM + L+ W G K LLFS S
Sbjct: 666 ------------------HLQNKAGYDWGDPEKSGKMLVVRNLLQIWKKLGHKTLLFSQS 707
Query: 542 VRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
ML+++EKFL + + R+DG T RQSL+D FN+ P +FL++TR GGLG+NL
Sbjct: 708 KMMLNVIEKFLGGLETVKYVRMDGETSIEKRQSLIDQFNTDPEIDIFLLTTRTGGLGVNL 767
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
ANR++IFDP+WNP+ D+QA++R++R GQ R V ++RL++AG++EE +Y RQ++KQ ++
Sbjct: 768 TGANRIIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMT 827
Query: 661 NIAVSGKLEKRYFE 674
N + ++ F+
Sbjct: 828 NKVLKDPKQRAAFD 841
>gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1213
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 308/590 (52%), Gaps = 110/590 (18%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DG Y ++P I L ++Q+ GV++L++LY+ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 397 DGGY---RIPGDIYPYLFDYQKTGVQWLWELYQQRVGGIIGDEMGLGKTIQVIAFLAGLH 453
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILE 239
K+D ++++CP +V++ W EF RW VSI H MI
Sbjct: 454 -----------YSKKLDAP--IIVVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINI 500
Query: 240 KLEACGVE----------------------------------VLITSFDSYRIHGSILSE 265
K E+ + VL+T++ + + S+L
Sbjct: 501 KKESRAEDTLTSEIWDPYRPTRMSGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIP 560
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
V+W I+DE H+++N + + + C EL+T +R+ L+GT MQN + EL++LFD+V P L
Sbjct: 561 VDWGCAILDEGHKIRNPDTAITIHCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRL 620
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT +FR ++ P++ G A ++ A + + L + YLL+R K + L
Sbjct: 621 GTLVNFRNQFEFPIRAGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK- 679
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + V+FC ++ LQ+ AY L E+ ++ R D L G D
Sbjct: 680 KTEQVLFCKLTKLQRAAYEAFLSSNEMSAIMRG-----------------RRDVLFGVDI 722
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
L++I NH +L P + Q+ + ++
Sbjct: 723 ------------LRKICNHPDL----PEHKTLSQKANYNYGNSA---------------- 750
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDG 564
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG
Sbjct: 751 --------KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDG 802
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+TP +RQ +VD+FN+ P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ DLQA++R
Sbjct: 803 NTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQARER 862
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R GQKR V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 863 AWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 912
>gi|326485451|gb|EGE09461.1| DNA repair and recombination protein RAD26 [Trichophyton equinum
CBS 127.97]
Length = 1035
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 214/701 (30%), Positives = 356/701 (50%), Gaps = 145/701 (20%)
Query: 144 GVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVL 203
GVK+L++LY+ + GGI+GD+MGLGKTIQ IAFLA + + KG ++
Sbjct: 212 GVKWLWELYQQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKL-------------KGPII 258
Query: 204 IICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA-------CGV--------- 246
++CP +V++ W EF RW F VSI H M+ K E+ GV
Sbjct: 259 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGVWGDRNSTSQ 318
Query: 247 -----------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
VL+T++ + + S+L V+W I ++DE H+++N + + +
Sbjct: 319 RGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWSIAVLDEGHKIRNPDTSITIH 378
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
C EL+T +R+ L+GT MQN + EL++LFD+V P LGT +FR ++ P++ G A
Sbjct: 379 CKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASN 438
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
++ A + + L + YLL+R K + L K + V+FC ++ +Q+ AY L
Sbjct: 439 LQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPK-KSEQVLFCKLTKVQRAAYEAFLAS 497
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
E+ ++ R + L G D L++I NH +L +
Sbjct: 498 GEMSSILRG-----------------RREALYGID------------MLRKICNHPDLTQ 528
Query: 470 PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWA 529
V D G S KS GKM+ ++ L+ W
Sbjct: 529 -----------------HKVLSTKTDYNYG----------SGAKS-GKMQVVKSLLELWK 560
Query: 530 SKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
G K LLF+ MLDILE+F IR G+++ R+DG+TP +RQS+VD+FN+ P VF
Sbjct: 561 DTGHKTLLFAQHRIMLDILERF-IRGFDGFNYRRMDGNTPIKVRQSMVDEFNNDPDLHVF 619
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V ++RL++AG++EE
Sbjct: 620 LLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEE 679
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN--------LFRDLSDN 699
+Y RQ++KQ L+N + +++ F+ + D + +LF + N +F+D +D
Sbjct: 680 KIYHRQIFKQFLTNKILRDPKQRQTFQ-MSDIQ----DLFTLGNDGPTETSQMFKD-ADI 733
Query: 700 LFTSEIIESHEEQ--GQQQERHHCTNQ-------------GFKGLETHIVSSKDSNTLLS 744
++ + + + G+QQ R N+ G G+E + D +
Sbjct: 734 VYEDDAAKGKNAKSSGRQQGRRQPENKPVKEEDQKISRVTGVAGMEEY----HDETSGPG 789
Query: 745 TGSKTRKSSDPEMARTSKPLLEDM----GIVYAHRNDDIVN 781
T + +++ ++T L+E++ G++ A +D I++
Sbjct: 790 TPQQEKEAEGESKSKTDARLMENIFSRSGVLSAVEHDQIIH 830
>gi|26330394|dbj|BAC28927.1| unnamed protein product [Mus musculus]
Length = 582
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 299/540 (55%), Gaps = 32/540 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDD++ EK ++ FQ LS+D
Sbjct: 62 TIPLQRLQEVKSTKDYSRSLIFDDKDLEKPYFPDRKIPSLASAFQ-----------LSED 110
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 111 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 166
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 167 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 226
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 227 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 286
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 287 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 346
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 347 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQL-PKKEDRMVYCSLTDFQKAVYQTVLETE 405
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+++NH+ L++
Sbjct: 406 DVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQKVANHVALLQA 462
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 463 ASTSK-HQETVIKRICDRVFSRFPDFV-QKSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 520
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 521 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 580
>gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata]
Length = 1071
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 315/612 (51%), Gaps = 129/612 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ GV++LY+L++ + GGI+GD+MGLGKTIQ AFLAA+
Sbjct: 288 KIPGEIFSLLFNYQKTGVQWLYELFQQRRGGIIGDEMGLGKTIQVTAFLAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH---------------- 230
S +L G VLI+CP++V++ W E +W F I H
Sbjct: 342 SNLLS-------GPVLIVCPATVMKQWCNEIHQWWPPFRAVILHSIGAGMNDKSNLTEDE 394
Query: 231 ------------------------------GPNRDMILEKLEACGVEVLITSFDSYRIHG 260
G + ++ K+ A G ++IT++ RIH
Sbjct: 395 IENMIIKSELENTDFHDYENASKLKSKVETGMHMQNLISKVVADG-HIIITTYVGLRIHS 453
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
L VNW ++DE H+++N S++ + C +LK +NRI L+GT +QN ++EL++LFD++
Sbjct: 454 DKLLNVNWSYCVLDEGHKIRNPDSEISLTCKKLKCKNRIILSGTPIQNNLVELWSLFDFI 513
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LGT F++ + +P+ G A ++ L ++ YLLRR K +
Sbjct: 514 YPGRLGTLPVFQQQFVQPINMGGYANATNTQVQTGYRCAVALRDLISPYLLRRVKADVAK 573
Query: 381 HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNL 440
L KE V+FC +++ Q+R Y L E L+Q++ KR
Sbjct: 574 DLPKKKE-MVLFCKLTEFQRRKYLEFLSSDE----------------LSQIKGGKRH--- 613
Query: 441 DGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGN 500
VL + L++I NH +L+ D D +
Sbjct: 614 ----------VLYGIDILRKICNHPDLL------------------------DRDYIKNT 639
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFS 560
+ G D K GKM+ +++L+ W S+G K LLF+ S +MLDILE+F+ K S
Sbjct: 640 S------GYGDPKRSGKMQVVKQLLKLWKSEGHKTLLFTQSRQMLDILEEFIKFKEPELS 693
Query: 561 -----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
R+DG+T +RQ+LVD FN+ S VFL++TR GGLG+NL ANR++I+DP+WNP
Sbjct: 694 DIRYLRMDGTTSIQVRQTLVDRFNNE-SYDVFLLTTRVGGLGVNLTGANRIIIYDPDWNP 752
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ DLQA++R++R GQKR V ++RL+ +G++EE +Y RQ++KQ L N +S +KR+F+
Sbjct: 753 STDLQARERAWRIGQKREVSIYRLMISGTIEEKIYHRQIFKQFLMNKVLSDPKQKRFFKT 812
Query: 676 --VQDCKEFQGE 685
+QD GE
Sbjct: 813 KELQDLFSLGGE 824
>gi|432905593|ref|XP_004077453.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1424
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 304/555 (54%), Gaps = 60/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV+++++L+ + GGILGD+MGLGKTIQ I+FLA G S
Sbjct: 488 FKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFLA---GLSYSK 544
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEK 240
T + + G +I+CP++V+ W EF + W F V++ H ++ ++ +
Sbjct: 545 LRTRGSNYRYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSKKEKLIPE 604
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ +C +LITS+ + R IL +W +I+DE H+++N + + AC + +T +R
Sbjct: 605 IASCH-GILITSYSAVRNLQDILIRYDWHYIILDEGHKIRNPNAAVTAACKQFQTPHRFI 663
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD+V PG LGT F E + P+ G A ++ A +
Sbjct: 664 LSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCAC 723
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + +L + K + V+FC +++ Q++ Y+ L E+ ++N D
Sbjct: 724 VLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQILNGD 783
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L PR
Sbjct: 784 MQVFSG-----------------------------LIALRKICNHPDLFSGGPR------ 808
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ + P+ L E G + GK+ +E L+ W +G ++LLFS
Sbjct: 809 -----MLKGI--PEDQLT-----EEEHFGF--WRRSGKLIVVESLLRLWFKQGHRVLLFS 854
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE F+ YS+ ++DG+T RQ L+ +N S +FL++T+ GGLG+N
Sbjct: 855 QSRQMLDILEVFVRENNYSYLKMDGTTTIASRQPLIARYNQDRSIFIFLLTTKVGGLGVN 914
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRV+I+DP+WNP+ D QA++R++R GQ V ++RLL+AG++EE +Y RQ++KQ L
Sbjct: 915 LTGANRVIIYDPDWNPSTDTQARERAWRIGQTLQVTIYRLLTAGTIEEKIYHRQIFKQFL 974
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 975 TNRVLKDPKQRRFFK 989
>gi|425777849|gb|EKV16005.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum
PHI26]
gi|425782618|gb|EKV20517.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum
Pd1]
Length = 1117
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 312/587 (53%), Gaps = 115/587 (19%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P EP + +G ++VP I+ L +Q+ GV++L++L++ GGI+GD+MGLGKTIQ
Sbjct: 311 PTEPAMELDNG----LRVPGDISRFLFPYQKIGVQWLWELHQQTVGGIIGDEMGLGKTIQ 366
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH 230
I++LAA+ + + I I+CP+++++ W EF RW F VSI H
Sbjct: 367 AISYLAALHHSKKLTKPAI-------------IVCPATLMKQWVNEFHRWWPPFRVSILH 413
Query: 231 GPNRDMI-----------------------------------LEKLEACGVEVLITSFDS 255
MI ++++ G VL+T++
Sbjct: 414 SSGSGMINLGKESSRENALSSEMMGSRNSRQLSAGQKADKRIIKRVTEEG-HVLVTTYSG 472
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
+ + L +V W I+DE H+++N + + +C EL+T +RI L+GT MQN +++L++
Sbjct: 473 LQSYADALVDVEWGCAILDEGHKIRNPDAGITFSCKELRTPHRIILSGTPMQNSLVDLWS 532
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD+V P LG F+ ++ P++ G +A ++ A + + L + YLL+R K
Sbjct: 533 LFDFVFPMRLGNLVTFKNQFEIPIRQGGYASASNLQVQTAAKCAETLKDAISPYLLQRFK 592
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
+ L M K + V+FC ++ LQ+ Y+R L +++ ++
Sbjct: 593 ADVTSDLPM-KSEQVIFCKLTQLQRTIYKRFLGSDDMKSIVRG----------------- 634
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
+ ++L G D L++ISNH P+ D + R+ A +G
Sbjct: 635 KRNSLFGIDI------------LRKISNH-----PDLADHALRSRE------ADYG---- 667
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IR 554
D + GKM+ L+ L+ W G K L+F+ MLDI+EKFL +
Sbjct: 668 ---------------DAERSGKMKVLKGLLEVWRDTGHKTLVFTQGRLMLDIIEKFLGVL 712
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
G++ R+DG+TP RQ+LVD+FN++P VFL++TR GG+G+NL A+RV+I+DP+WN
Sbjct: 713 GGFNSRRMDGTTPIKERQNLVDEFNNNPEIHVFLLTTRVGGIGVNLTGADRVIIYDPDWN 772
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
P+ DLQA++R++R GQKR V +FRL++ G++EE +Y RQ++KQ L+N
Sbjct: 773 PSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTN 819
>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
VdLs.17]
Length = 1116
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 317/614 (51%), Gaps = 101/614 (16%)
Query: 89 EKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPI---IQVPASINCRLLEHQREGV 145
E+ E K R + G + +GP + +Y I +++P I+ L +Q+ GV
Sbjct: 301 ERRSEARKQRRLEAGDTSVEPSGPEWSKPSPDEEDYVINDDLRLPGDIHPSLFSYQKTGV 360
Query: 146 KFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLII 205
++L +LY GGI+GD+MGLGKT+Q IAF+AA+ K+ K V+I+
Sbjct: 361 QWLAELYSQNVGGIVGDEMGLGKTVQAIAFIAALH-----------YSKKLTKP--VIIV 407
Query: 206 CPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI-----------------------LEKL 241
P++V++ W EF RW VSI H MI ++++
Sbjct: 408 APATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHNGRRDKSVRKIVDRV 467
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G VL+T+++ + + L V W+ ++DE H+++N +++ + C EL+T NRI L
Sbjct: 468 VKHG-HVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEITVLCKELRTPNRIIL 526
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + EL++LFD++ P LGT FR ++ P+K G A I A++ +
Sbjct: 527 SGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAET 586
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + +YLL+R K + L K + V+FC M+D Q AY++ L N D
Sbjct: 587 LKEAISQYLLQRLKIDVAADL-PSKTERVLFCKMTDRQLEAYKQFL---------NSD-- 634
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ Q+ +R +L G D L++I NH +LI P
Sbjct: 635 -----AVNQILSARR-KSLYGIDI------------LRKICNHPDLIDP----------- 665
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ QN++ D + GKM + L+ W G K LLFS S
Sbjct: 666 ------------------HLQNKAGYDWGDPEKSGKMLVVRNLLQIWKKLGHKTLLFSQS 707
Query: 542 VRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
ML+++EKFL + + R+DG T RQSL+D FN+ P +FL++TR GGLG+NL
Sbjct: 708 KMMLNVIEKFLGGLETVKYVRMDGETSIEKRQSLIDRFNTDPEIDIFLLTTRTGGLGVNL 767
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
ANR++IFDP+WNP+ D+QA++R++R GQ R V ++RL++AG++EE +Y RQ++KQ ++
Sbjct: 768 TGANRIIIFDPDWNPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMT 827
Query: 661 NIAVSGKLEKRYFE 674
N + ++ F+
Sbjct: 828 NKVLKDPKQRAAFD 841
>gi|156064177|ref|XP_001598010.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980]
gi|154690958|gb|EDN90696.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1103
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/608 (31%), Positives = 315/608 (51%), Gaps = 120/608 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 406 LKLPGDIFPALFDYQKTGVQWLSELYNQQVGGIIGDEMGLGKTIQIISFLAGLH------ 459
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
K+ K ++++ P++V++ W EF RW VSI H M
Sbjct: 460 -----YSKKLTKP--IIVVAPATVLRQWVNEFHRWWPALRVSILHSSGTGMLNVRNEGRL 512
Query: 237 -------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIV 271
I++++ G VL+T++ + + L V+W+
Sbjct: 513 EDEEDDIIYGQTTKKAPKSQKLAQKIVDRVVKHG-HVLVTTYAGLQTYSDTLINVDWDYA 571
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
++DE H+++N + + + C EL+T NR+ L+GT MQN ++EL++LFD+V P LGT +F
Sbjct: 572 VLDEGHKIRNPNTAVTIYCKELRTPNRVILSGTPMQNGLIELWSLFDFVFPMRLGTLVNF 631
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R+ ++ P+K G A + A + + L + YLL+R K + L K + V+
Sbjct: 632 RQSFEVPIKIGGYANATNLQVLTATKCAETLKDAISPYLLQRLKVDVAADLPK-KSEQVL 690
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC ++ Q+ AY L E++ ++N+ G +
Sbjct: 691 FCKLTRPQRDAYEMFLASDEMKSILNRTRQSLYGIDI----------------------- 727
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH +L+ DK+ K P+ GN
Sbjct: 728 ------LRKICNHPDLL--------DKRLKTK--------PNYKWGNGN----------- 754
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNL 570
GKM+ ++ L+ W G K LLFS V+MLDILE+F+ + G+++ R+DG T
Sbjct: 755 --KSGKMQVVKALLQMWKGYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRMDGGTAIKD 812
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ+LVD FN+ P+ VFL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQ
Sbjct: 813 RQTLVDQFNNDPNMHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQ 872
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE----------GVQDCK 680
K+ V ++RL++AG++EE +Y RQ++KQ L+N + +++ F G QDC
Sbjct: 873 KKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFAMKDLYDLFTLGDQDCG 932
Query: 681 EFQ-GELF 687
+ GE+F
Sbjct: 933 TTETGEMF 940
>gi|451996821|gb|EMD89287.1| hypothetical protein COCHEDRAFT_1180734 [Cochliobolus heterostrophus
C5]
Length = 1221
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 219/732 (29%), Positives = 349/732 (47%), Gaps = 125/732 (17%)
Query: 113 FEPLVLSKDGEYPI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
++P D E+ ++P I L ++Q+ GV++L++LY GGI+GD+MGLGKTIQ
Sbjct: 374 YQPHPTEADAEFDGGFRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQ 433
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH 230
++F+A L +K+ K V+++CP++V++ W EF RW VSI H
Sbjct: 434 AVSFVAG------------LHYSKLLTKP-VIVVCPATVMKQWVNEFHRWWPALRVSILH 480
Query: 231 GPNRDM----------------------------------ILEKLEACGVEVLITSFDSY 256
M ILEK++ G VL+T++
Sbjct: 481 TSGSGMLDTRREDRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDG-HVLVTTYSGL 539
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
+ + L WE ++DE H+++N + + + C EL+T NRI L+GT MQN + EL++L
Sbjct: 540 QTYAEFLIPTEWECAVLDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSL 599
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKE 376
FD+V P LGT +FR ++ P+K G A A + L + YLL+R K
Sbjct: 600 FDFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKA 659
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
+ L KE V+FC ++ Q++AY L +++ + N +
Sbjct: 660 DVATDLPQKKE-QVLFCKLTKQQRQAYESFLASEDMRSIANG-----------------K 701
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
L G D L++I NH +L E + P D
Sbjct: 702 RQMLYGVDY------------LRKICNHPDLT---------------EHKTLSKKPGYDY 734
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-K 555
GNA GKM+ +++L+ W G K LLF+ MLDIL+KF+ +
Sbjct: 735 --GNASK-----------SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLP 781
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
++ R+DG TP RQ++VD+FN+ P+ VFL++T+ GGLG+NL ANRV+I+DP+WNP
Sbjct: 782 DINWRRMDGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNP 841
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE- 674
+ D+QA++RS+R GQKR V ++RL+SAG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 842 STDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQM 901
Query: 675 ---------GVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
GV+ +GE NLFR + E+ + +G
Sbjct: 902 SDLHDLFSLGVESA---EGET-ETGNLFRGSEVKFEEDGKTVAGEKDDATAAKDLAAVKG 957
Query: 726 FKGLETHIVSSKDSNTLLSTGSKTRKSSD--PEMARTSKPLLEDMGIVYAHRNDDIVNKQ 783
E DS +T + D P +R + G+ +D I+N
Sbjct: 958 ISRSEAFKAPVSDSEETPTTNEDGTATDDKTPADSRLMSTIFAKTGVHSVLEHDAIMNST 1017
Query: 784 PGFQRKKEESIP 795
G +++K ++ P
Sbjct: 1018 AGGRKRKVQADP 1029
>gi|326523023|dbj|BAJ88557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1220
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/591 (30%), Positives = 312/591 (52%), Gaps = 110/591 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P S+ +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++FL A+
Sbjct: 398 LRIPGSVYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALH------ 451
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
DS + K + ++ICP +++Q W E S+W F V I H
Sbjct: 452 DSGMYKPS--------IVICPVTLLQQWRREASKWYPKFKVEILHDSANSSSKKGKRYSD 503
Query: 231 -------------------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIV 271
D ++ ++ G +L+T+++ RI L ++ W
Sbjct: 504 SESDVSWDSDQEEVTRVKPAQKWDDLISRVVNSGSGLLLTTYEQLRIIREKLLDIEWGYA 563
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG F
Sbjct: 564 VLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVF 623
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
+ P+ G A + A L ++ YLLRR K + L K + V+
Sbjct: 624 ETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPK-KTEQVL 682
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC+++ Q+ YR L E++ + + + ++L G D
Sbjct: 683 FCSLTQEQRATYRAFLASSEVEQIFDGNR-----------------NSLYGIDV------ 719
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH +L+ +R+ A AQN + +
Sbjct: 720 ------LRKICNHPDLL----------EREQA-----------------AQNPDY---GN 743
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
++ GKM+ +E+++ W +G ++LLF+ + +MLDILE FL + Y + R+DG TP R
Sbjct: 744 IERSGKMKVVEQILKVWKDQGHRVLLFAQTQQMLDILESFLTARDYQYRRMDGLTPPKQR 803
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
+L+D+FN++ +F+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQK
Sbjct: 804 MALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQK 863
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+
Sbjct: 864 RDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFK-ARDMKDL 913
>gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior]
Length = 1020
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 300/556 (53%), Gaps = 53/556 (9%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ ++P I +L +Q+ VK+L++L+ K GG+LGD+MGLGKT++ IAFLA +
Sbjct: 226 LFKMPQCIWEKLYRYQKVAVKWLWELHSRKLGGLLGDEMGLGKTVEIIAFLAGL-----D 280
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH---GPNRD--MILE 239
+ + G +I+CP+++++ W F W F V + H G N D ++E
Sbjct: 281 CSELLSYHGRYRGLGPTIIVCPATLMEQWVKHFHEWWPFFRVVVLHHSGGYNGDPESLIE 340
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L+ G+ LITS++ H +L W VI+DE H+++N ++K+ A T +R+
Sbjct: 341 SLQIGGI--LITSYNGVLKHKDLLVSSQWHYVILDEGHKIRNPQAKVSRAVKRFSTPHRL 398
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A A +
Sbjct: 399 LLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEHCAMPITRGGYTNATPLQEATALQIA 458
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + Y+LRRTK + HL + K + V+FC+++D QK+ Y++ L ++ ++++
Sbjct: 459 TMLKNTITPYMLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSDDVSFVLHE 518
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
CS G + L L L++I NH +L + D+
Sbjct: 519 RNYCSSGRYRARF--------------------LIALSALRKICNHPDLFLYTREQDSDE 558
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
DIDL + Q E F K GKM + L+ W +G ++LLF
Sbjct: 559 --------------DIDL--SDEQIEKF---GYYKRAGKMTVVRSLLKIWQKQGHRVLLF 599
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ +M+ ILE L R+ Y + R+DG+T + RQ + FN+ S VFL++TR GGLG+
Sbjct: 600 TQGRQMMHILESLLQREKYIYLRMDGTTAMSQRQQTIQKFNNDSSYFVFLLTTRVGGLGI 659
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRVVI+DP+WNPA D QA++R++R GQ + V V+RL++AG++EE +Y RQ++K
Sbjct: 660 NLTGANRVVIYDPDWNPATDAQARERAWRIGQNKQVTVYRLITAGTIEEKIYHRQIFKLL 719
Query: 659 LSNIAVSGKLEKRYFE 674
LSN + +++ F+
Sbjct: 720 LSNKVLDEPRQRQLFK 735
>gi|242056785|ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
gi|241929513|gb|EES02658.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor]
Length = 1208
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 317/602 (52%), Gaps = 115/602 (19%)
Query: 121 DGEYPII-----QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
DG P+I ++P +I +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++F
Sbjct: 374 DGVSPVILEGGLRIPGTIYEQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSF 433
Query: 176 LAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH---- 230
L ++ +S++ K + ++ICP +++Q W+ E SRW F V I H
Sbjct: 434 LGSLH------NSSMYKPS--------IVICPVTLLQQWQREASRWYPKFKVEILHDSAN 479
Query: 231 -----------------------GPNR-------DMILEKLEACGVEVLITSFDSYRIHG 260
G R D ++ ++ G +L+T+++ RI G
Sbjct: 480 GSSKKSKAYNDSDSEGSWDSDQEGVRRAKPAKKWDDLISRVVNSGSGLLLTTYEQLRILG 539
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
L ++ W ++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V
Sbjct: 540 EKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFV 599
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LG F + P+ G A + A L ++ YLLRR K +
Sbjct: 600 FPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA 659
Query: 381 HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNL 440
L K ++V+FC+++ Q+ YR L E++ + + + ++L
Sbjct: 660 QLPK-KTEHVLFCSLTPEQRSTYRAFLASSEVEQIFDGNR-----------------NSL 701
Query: 441 DGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGN 500
G D L++I NH +L+ E A PD GN
Sbjct: 702 YGIDV------------LRKICNHPDLL---------------EREHAAQNPDY----GN 730
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFS 560
+ GKM+ +E+++ W +G ++LLF+ + +MLDILE FL Y +
Sbjct: 731 PER-----------SGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILENFLTACDYQYR 779
Query: 561 RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
R+DG TP+ R +L+D+FN++ VF+++T+ GGLG NL ANR++I+DP+WNP+ D+Q
Sbjct: 780 RMDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQ 839
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK 680
A++R++R GQ R V V+RL++ G++EE VY RQ+YK L+N + +KR+F+ +D K
Sbjct: 840 ARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQKRFFKA-RDMK 898
Query: 681 EF 682
+
Sbjct: 899 DL 900
>gi|451847747|gb|EMD61054.1| hypothetical protein COCSADRAFT_124441 [Cochliobolus sativus ND90Pr]
Length = 1221
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 219/732 (29%), Positives = 347/732 (47%), Gaps = 125/732 (17%)
Query: 113 FEPLVLSKDGEYPI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
++P D E+ ++P I L ++Q+ GV++L++LY GGI+GD+MGLGKTIQ
Sbjct: 374 YQPHPTETDAEFDGGFRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQ 433
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH 230
++F+A + S +L V+++CP++V++ W EF RW VSI H
Sbjct: 434 AVSFVAGLHY------SRLLTKP-------VIVVCPATVMKQWVNEFHRWWPALRVSILH 480
Query: 231 GPNRDM----------------------------------ILEKLEACGVEVLITSFDSY 256
M ILEK++ G VL+T++
Sbjct: 481 TSGSGMLDTRREDRIEREMELRNYGDYDTTLTGAGKAAKKILEKVKRDG-HVLVTTYSGL 539
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
+ + L WE I+DE H+++N + + + C EL+T NRI L+GT MQN + EL++L
Sbjct: 540 QTYAEFLIPTEWECAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSL 599
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKE 376
FD+V P LGT +FR ++ P+K G A A + L + YLL+R K
Sbjct: 600 FDFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKA 659
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
+ L KE V+FC ++ Q++AY L +++ + N +
Sbjct: 660 DVATDLPQKKE-QVLFCKLTKQQRQAYESFLASEDMRSIANG-----------------K 701
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
L G D L++I NH +L E + P D
Sbjct: 702 RQMLYGVDY------------LRKICNHPDL---------------TEHKTLSKKPGYDY 734
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-K 555
GNA GKM+ +++L+ W G K LLF+ MLDIL+KF+ +
Sbjct: 735 --GNANK-----------SGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLP 781
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
++ R+DG TP RQ++VD+FN+ P+ VFL++T+ GGLG+NL ANRV+I+DP+WNP
Sbjct: 782 DINWRRMDGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNP 841
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE- 674
+ D+QA++RS+R GQKR V ++RL+SAG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 842 STDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQM 901
Query: 675 ---------GVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
GV+ +GE NLFR E+ + +G
Sbjct: 902 SDLHDLFTLGVESA---EGET-ETGNLFRGSEVKFEEDGKTAEGEKDDATAAKDLAAVKG 957
Query: 726 FKGLETHIVSSKDSNTLLSTGSKTRKSSD--PEMARTSKPLLEDMGIVYAHRNDDIVNKQ 783
E DS +T + D P +R + G+ +D I+N
Sbjct: 958 ISRSEAFKAPVSDSEETPTTNEDGTATDDKTPVDSRLMSTIFAKTGVHSVLEHDAIMNST 1017
Query: 784 PGFQRKKEESIP 795
G +++K ++ P
Sbjct: 1018 SGGRKRKVQADP 1029
>gi|281211032|gb|EFA85198.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1376
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 309/561 (55%), Gaps = 81/561 (14%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
DGE+ +VP I RL E+Q V+++++L+ + GGI+GD+MGLGKTIQ I+FLA++
Sbjct: 587 DGEF---KVPFEIYHRLFEYQVTCVRWMWELHSQESGGIIGDEMGLGKTIQIISFLASLH 643
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN-----R 234
S +L G LII P++++ NW E +W F V ++H N +
Sbjct: 644 Y------SKMLC-------GPALIIAPATLLSNWVKEIHKWWPPFRVILFHSSNNTKQTQ 690
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
++E + G +L+T+++ RI+ IL + +WE VI+DE H+++N + + ++ +
Sbjct: 691 KQLVETIATKG-HILLTTYEGVRINQDILLKHHWEYVILDEGHKIRNPDADITLSVKQFP 749
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
T +RI L+G+ +QNK+ EL++LFD++ PG LGT F + P+ G A ++
Sbjct: 750 TCHRIILSGSPIQNKLTELWSLFDFIFPGKLGTLPIFMSQFSVPINLGGYANASSLQVQT 809
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
A + L ++ Y+LRR K + + L K + V+ C ++ Q+R Y + L E +
Sbjct: 810 AYKCAVALRDLISPYMLRRVKADVLQSLP-SKNEQVLLCPLTPFQERLYMKFLSSNEAK- 867
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
D +DG + + + + L++I NH
Sbjct: 868 -----------------------DVMDGKKNLLYAIDI-----LKKICNH---------- 889
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
PDI L + + +V+ K++ +++++ W +G K
Sbjct: 890 -----------------PDI-LHKDDDDKDKPDDYGNVERSSKLKVVQEILPMWQQQGHK 931
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
+LLF + +MLDI+E+F+ Y + R+DG+T +RQ+LV++FN+ P +FL++T+ G
Sbjct: 932 VLLFCQTRQMLDIVEEFIKNSNYQYRRMDGTTSIKVRQTLVEEFNNDPILFIFLLTTKVG 991
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL ANRV++FDP+WNP+ D+QA++R +R GQK+ V ++RL++ G++EE +Y RQ+
Sbjct: 992 GLGINLTGANRVILFDPDWNPSTDIQARERVYRIGQKKTVTIYRLMTTGTIEEKIYHRQI 1051
Query: 655 YKQQLSNIAVSGKLEKRYFEG 675
YKQ LSN + +KR+F+
Sbjct: 1052 YKQFLSNKILKDPRQKRFFQS 1072
>gi|347836765|emb|CCD51337.1| similar to DNA repair protein Rhp26/Rad26 [Botryotinia fuckeliana]
Length = 1209
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 313/598 (52%), Gaps = 110/598 (18%)
Query: 113 FEPLVLSKDGEYPI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
F+P D E+ +++P I L ++Q+ GV++L +L+ + GGI+GD+MGLGKTIQ
Sbjct: 409 FKPCPGQPDHEFENGLKLPGDIFPALFDYQKTGVQWLSELHNQQVGGIIGDEMGLGKTIQ 468
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH 230
I+FLA + K+ K V+++ P++V++ W EF RW VSI H
Sbjct: 469 MISFLAGLH-----------YSKKLTKP--VIVVAPATVLRQWVNEFHRWWPALRVSILH 515
Query: 231 GPNRDM----------------------------------ILEKLEACGVEVLITSFDSY 256
M I++++ G VL+T++
Sbjct: 516 SSGTGMLNVGNEDRLEDDDDEILYGQTTKKAPKSQKLAQKIVDRVVKHG-HVLVTTYAGL 574
Query: 257 RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNL 316
+ + + L V+W+ ++DE H+++N + + + C EL+T NR+ L+GT MQN ++EL++L
Sbjct: 575 QTYSNTLINVDWDYAVLDEGHKIRNPNTAVTIYCKELRTPNRVILSGTPMQNGLVELWSL 634
Query: 317 FDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKE 376
FD+V P LGT +FR+ ++ P+K G A + A + + L + YLL+R K
Sbjct: 635 FDFVFPMRLGTLVNFRQAFEVPIKIGGYANATNLQVLTATKCAETLKDAISPYLLQRLKV 694
Query: 377 ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKR 436
+ L K + V+FC ++ Q+ AY L +++ ++N+ G +
Sbjct: 695 DVAADLPK-KSEQVLFCKLTRPQRDAYEMFLASDDMKSILNRSRQSLYGIDI-------- 745
Query: 437 LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
L++I NH +L+ DK+ K+ PD
Sbjct: 746 ---------------------LRKICNHPDLL--------DKRLKNK--------PDYKW 768
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-K 555
GN GKM+ ++ L+ W G K LLFS V+MLDILE+F+ +
Sbjct: 769 GNGN-------------KSGKMQVVKALLQMWKGYGHKTLLFSQGVQMLDILEEFVKKLG 815
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
G+++ R+DG T RQ+LVD FN+ P VFL++T+ GGLG+NL ANRV+IFDP+WNP
Sbjct: 816 GFNYLRMDGGTAVKDRQTLVDQFNNDPEMHVFLLTTKVGGLGVNLTGANRVIIFDPDWNP 875
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
+ D+QA++R++R GQK+ V ++RL++AG++EE +Y RQ++KQ L+N + +++ F
Sbjct: 876 STDVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTF 933
>gi|342182037|emb|CCC91516.1| putative DNA excision repair protein [Trypanosoma congolense
IL3000]
Length = 1136
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 311/578 (53%), Gaps = 49/578 (8%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I +P S+ RLLEHQREG+ +L L+ + GGILGDDMGLGKT+Q A L A+ ++
Sbjct: 408 ISLPVSLYQRLLEHQREGLAWLLNLHMQRMGGILGDDMGLGKTVQVAAMLNALHHSNQ-- 465
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF------NVSIYHGPNRDMILEK 240
G LI+ P +V++ W +E RW+ + +VS G +RD ++
Sbjct: 466 -----------LHGPCLIVAPVTVLRQWVVEMHRWAPYMRTCVMHVSSASGMSRDELIAS 514
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
++ VL+T++ + R H +L ++ +++DE H++ N ++ + +A T +R+
Sbjct: 515 VKGTPA-VLLTTYSAVREHCCLLHSACFQYIVLDEGHKISNPEATVTIAVKSFPTPHRLI 573
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + EL+ LFD+V PG LGT F E +++P+ + L A + A ER +
Sbjct: 574 LSGTPVQNTLKELWCLFDFVRPGLLGTMTRFVEEFEDPISSSKSLRASPLALATAVERAR 633
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + +LLRR K + + + K + V+ C +SD Q AY LL P +Q L+ K +
Sbjct: 634 VLHDTIAPFLLRRLKRQVMVDSLPEKYERVIRCPLSDSQLEAYIELLTSPSVQKLLGKTM 693
Query: 421 PCS-------------CGSPLTQVECCKRLDNLDGCDSCP---FCLVLPCLVKLQQISNH 464
+ GS C + + C FC+ + +L+QI NH
Sbjct: 694 SYTKLVGGLDRDGRDASGSLHISGRCFQLMYGGKSKGHCRHELFCV----MHELRQICNH 749
Query: 465 LELIK---PNPRDEPDKQRKDA--ELASAVFGPDIDLVGGNAQNESFIGLSDV----KSC 515
+++ + + D+ D+ EL +A G + G + SF S++
Sbjct: 750 VDIFRMRRASSSGYDDELDADSFPELGNARDGGNSFKKAGGKGSPSFSLRSNLPVNFAGS 809
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
K++ L KL+ W S G + L FS + MLDI+E ++G+++ R+DG+T + RQ LV
Sbjct: 810 SKLQTLRKLLTFWKSSGKRALAFSQTRAMLDIIENMCEQEGFTYIRMDGNTSTLRRQELV 869
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D FN S V L++TR GG+G+NL+ A+RVVIFDP+WNP D QA++R++R GQ R V
Sbjct: 870 DRFNEDDSIVVALLTTRVGGVGVNLIGADRVVIFDPDWNPVTDEQARERAWRIGQTRDVG 929
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
V+RL+S+G++EE V RQ+ K + + +R+F
Sbjct: 930 VYRLISSGTVEEAVLRRQLAKTYVKEKVLHDPTLQRFF 967
>gi|67541879|ref|XP_664707.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|40742118|gb|EAA61308.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|259483574|tpe|CBF79076.1| TPA: DNA repair protein Rhp26/Rad26, putative (AFU_orthologue;
AFUA_4G03840) [Aspergillus nidulans FGSC A4]
Length = 1193
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 304/580 (52%), Gaps = 106/580 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I+ L ++Q+ GV+++++L++ + GGI+GD+MGLGKTIQ IAFLA +
Sbjct: 389 RIPGDIHPLLFDYQKTGVQWMWELHQQQVGGIIGDEMGLGKTIQAIAFLAGLH------- 441
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
++ K ++++CP++V++ W EF RW F VSI H M+ K E+
Sbjct: 442 ----YSKRLTKP--IIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESSRE 495
Query: 245 ---------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDE 275
G++ VL+T++ + + S+L V W I+DE
Sbjct: 496 DALMYGTYWSGGSSSGLKAARKVVKRVVEEGHVLVTTYSGLQSYASLLIPVEWGGTILDE 555
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + M EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR +
Sbjct: 556 GHKIRNPNTSITMHAKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQF 615
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A ++ A + + L + YLL+R K + L K + V+FC +
Sbjct: 616 EFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFCRL 674
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ Q++AY L E+Q ++ R L G D
Sbjct: 675 TKPQRQAYEAFLGSEEMQSILRG-----------------RRQVLYGVDI---------- 707
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH PD Q A +G +
Sbjct: 708 --LRKICNH-----------PDLQNHKLLYAKPNYG-------------------NPTKS 735
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSL 574
GKM+ + L+ W G K LLF+ MLDILEKF+ G+++ R+DG+TP RQ++
Sbjct: 736 GKMQVVRSLLELWKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQTM 795
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD+FN P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR V
Sbjct: 796 VDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDV 855
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 856 TIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 895
>gi|348665749|gb|EGZ05578.1| hypothetical protein PHYSODRAFT_533639 [Phytophthora sojae]
Length = 1086
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 324/598 (54%), Gaps = 96/598 (16%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP+ + +LL HQRE +++L+KL++ GGILGDDMGLGKT+Q +FL ++
Sbjct: 227 VPSYVLTQLLPHQRECLEWLHKLHERGVGGILGDDMGLGKTVQLASFLGSL--------- 277
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----------------STFNVSIYHG 231
++ + VL++CP+SV+ W E +W ++F+ Y
Sbjct: 278 -----HRARRLRTVLLLCPASVLLQWVRELHKWVPWMRVVLLHASGTGVSTSFSSDSYEQ 332
Query: 232 PNRDMILEKLEACGVE-------------------VLITSFDSYRIHGSILSEVNWEIVI 272
++ + E G E V+I+++++ R + S+ W+ V+
Sbjct: 333 LIDEVFRFEDEMSGDEADGGDEFSGMGGHAPTGGGVVISTYENVRQYQSLFLTREWDYVV 392
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE HR++N ++ +AC +L+T +RI L+GT +QN++ EL++LFD+V PG LGT F
Sbjct: 393 LDEGHRIRNPDAETTLACKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFD 452
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI--------GHLMM 384
+ + P++ G TA + + +A + L +++ +LLRRTK+E + G L+
Sbjct: 453 DEFVLPIRAGGYATATKMQVLMAYKCALALKDLIQPFLLRRTKQEVLTNGASGKMGALLP 512
Query: 385 GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCD 444
GK++ ++FC ++ Q+ Y+R L PE+ ++ +D+
Sbjct: 513 GKQEQILFCRLTKRQRALYKRFLASPEVASVLRRDIR----------------------- 549
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDE-PDKQRKDAELASAVFGPD---IDLVGG- 499
PF + L+ I NH +L+ DK+R+ + DL G
Sbjct: 550 --PFR----AISVLRHICNHPDLLASFGDGRLADKRRQKYDDDEDNEEEQEGLTDLAGML 603
Query: 500 ---NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG 556
+ + ES + GKM L+K++ W +G ++L+F+ + MLDILE F+ R+G
Sbjct: 604 DEVDDEGESDEPFGAASASGKMIVLQKILGLWKEQGHRVLIFTQTRSMLDILESFMSRQG 663
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
++ RLDG+T RQ +D FN+ S+ FL++TRAGG+G+NLV A+RVV+FDP+WNP
Sbjct: 664 HACCRLDGTTGVAERQQRLDAFNAPDSELFAFLLTTRAGGIGVNLVGADRVVVFDPDWNP 723
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
+ D+QA++R++R GQ++ V V+RL++AG++EE +Y RQ++KQ L++ + KR F
Sbjct: 724 STDVQARERAWRIGQQKQVTVYRLVTAGTIEEKIYHRQIFKQYLTSKVLHDAKRKRCF 781
>gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
Length = 1464
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 316/595 (53%), Gaps = 68/595 (11%)
Query: 87 EKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVK 146
+ KE+ Q+K RH+ G+ T E DG + ++P +L ++Q+ GV+
Sbjct: 473 QNHKEKLQQKQARHEAGEDSGSETSDVE-----MDGGF---KLPGETWNKLYKYQQTGVR 524
Query: 147 FLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIIC 206
+L++L+ + GGI+GD+MGLGKTIQ I FL + + + + K + G L++
Sbjct: 525 WLWELHSQQAGGIMGDEMGLGKTIQAIVFLYGLQYGNVRNRGIMTKYIGL---GPCLVVA 581
Query: 207 PSSVIQNWEIEFSRW-STFNVSIYH-----GPNRDMILEKLEACGVEVLITSFDSYRIHG 260
P +V+ W EF W V+I H ++D ++ ++ A VL+TS+ +
Sbjct: 582 PVTVLHQWVREFHTWFPRVRVAILHESGTFTTSKDRLIREI-ARDRGVLVTSYQEVNLRQ 640
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
L +W VI+DE H+++N +K+ +AC + +T +RI L+G+ MQN + EL++L D+V
Sbjct: 641 DSLLHYDWHYVILDEGHKIRNPDAKVTLACKQFRTPHRIILSGSPMQNNLRELWSLCDFV 700
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LGT F E + P+ G A ++ A + L + YLLRR K +
Sbjct: 701 FPGKLGTLPVFMEQFSVPITQGGYANATPVQVQTAYKCACVLRDTINPYLLRRMKNDVKM 760
Query: 381 HLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
+L + K + V+FC +++ QK AY+ L E Q +
Sbjct: 761 NLNLPNKSEQVLFCRITEEQKEAYKDYLGSRECQQI------------------------ 796
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
LDG V L+ L++I NH +L+ PR + G D +
Sbjct: 797 LDGQ-----YQVFAGLITLRKICNHPDLVTGGPR--------------IMVGTDESTLTK 837
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSF 559
+ + K GKM + L+ W +G ++LLFS S +MLD++E+F+ + Y++
Sbjct: 838 DQHYGYW------KRSGKMIVVNTLLKMWHKQGHRVLLFSQSKQMLDLMEEFVQDQSYTY 891
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DG+T + RQ + FN S VFL++TR GGLG+NL ANRV+IFDP+WNP+ D+
Sbjct: 892 MRMDGTTTISSRQPKITKFNKDTSIFVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDM 951
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
QA++R++R GQ + V ++RLL+ G++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 952 QARERAWRIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPRQRRFFK 1006
>gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
Length = 1206
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 296/556 (53%), Gaps = 64/556 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P+ I +L ++QR GV++L++L + GGILGD+MGLGKTIQ IAFLA + S
Sbjct: 332 FKMPSIIWNKLFKYQRVGVQWLWELNIQQCGGILGDEMGLGKTIQIIAFLAGL-----SV 386
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSI------YHGPNRDMILE 239
+ + G VLI+CP++V+ W EF +W F V++ YHG D+I
Sbjct: 387 SKLLSRHGYFRGLGPVLIVCPTTVMHQWVREFHKWWPQFRVALLHESGTYHGKKYDLIKN 446
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+++ G+ LITS+ + S L W VI+DE H+++N S++ + L T +R+
Sbjct: 447 IIKSNGI--LITSYITCLQQSSDLQRQKWHYVILDEGHKIRNPDSQIAINIKLLNTPHRL 504
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+G+ +QN + EL++LFD++ PG LGT F + P+ G A + + A +
Sbjct: 505 ILSGSPIQNNLKELWSLFDFIFPGKLGTLPVFLAEFGVPITQGGYANASKVQVLTAYKCA 564
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + YLLRR KE+ H+ + K + V+FC +++ QK Y L + + N
Sbjct: 565 TVLRDTISPYLLRRAKEDVKTHINLPPKNEQVLFCRLTNEQKELYVNYLNSGSVNEIFNG 624
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
G L+ L++I NH L P
Sbjct: 625 KQKLFVG-----------------------------LINLRKICNHPHLYSGGP------ 649
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
K +L F P+ + G K GKM +E L+ W +G ++L+F
Sbjct: 650 --KHVKLDDLEFIPEENKFGY------------WKKAGKMIVMETLLKIWKKQGHRVLIF 695
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ S +ML ILE F++ + Y + +LDG+T RQ L++ FN +FL +T GGLG+
Sbjct: 696 TQSRKMLSILENFVLSQNYEYLKLDGTTNIGSRQPLINKFNEEKKYYIFLSTTHVGGLGV 755
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRVVI+DP+WNPA D+QA++R++R GQ+ V ++RL+++G++EE +Y RQ++KQ
Sbjct: 756 NLTGANRVVIYDPDWNPATDMQARERAWRIGQENQVTIYRLVTSGTIEEKIYHRQIFKQF 815
Query: 659 LSNIAVSGKLEKRYFE 674
L+N + ++R+F+
Sbjct: 816 LTNKVLKDPSQRRFFK 831
>gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6
(ATP-dependent helicase ERCC6) (Cockayne syndrome
protein CSB) [Ciona intestinalis]
Length = 1155
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 297/563 (52%), Gaps = 80/563 (14%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG-KDESSD 187
+P I +L ++Q+ GVK+L++L+ GG+LGD+MGLGKT+Q I+FLA + K D
Sbjct: 1 MPGKIWNKLYKYQQTGVKWLWELHTQHVGGVLGDEMGLGKTVQIISFLAGLHNSKIRDRD 60
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILEK 240
++ D G VLII P++V+Q W EF W V+I H G D+I
Sbjct: 61 ASY----SYDGLGPVLIIAPATVMQQWLREFHTWLPLVRVAILHSSGSHRGSKNDLINNM 116
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ + GV LITS++ R+ +L W VI+DE H+++N ++ + A T +RI
Sbjct: 117 VLSRGV--LITSYERARLSIDMLMTKGWHYVILDEGHKIRNPQAAVTHAVKRFPTPHRII 174
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ +QN + EL++LFD++ PG LGT F E + P+ G A E + A +
Sbjct: 175 LSGSPIQNHLQELWSLFDFIYPGKLGTLPVFMEQFSVPIVQGGYANASEVQVETAYKCAC 234
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + H+ + K D V+FC+++D Q Y+ L + ++
Sbjct: 235 VLRDTISPYLLRRMKVDVQSHIKLPPKSDQVLFCSLTDEQVDVYKEYLDSDIVHSIL--- 291
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
C+R G L++L++I NH
Sbjct: 292 --------------CRRAKIFVG------------LIQLRKICNH--------------- 310
Query: 480 RKDAELASAVFGPDIDLVGGN--AQNESFIGLSDV------KSCGKMRALEKLMYSWASK 531
PD+ GG+ E+ G D + GKM +E L+ W +
Sbjct: 311 ------------PDL-FTGGHKLMVGEATPGYGDSRRFGYWRRSGKMVVVESLLRIWKKQ 357
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
G K+LLF+ S +ML ILE F+ + Y + + G T RQ LV FN PS VF+++T
Sbjct: 358 GKKVLLFTQSRKMLGILEDFVKSRSYCYLTMHGQTSVQARQPLVKKFNEDPSIFVFILTT 417
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
R GGLG+NL+ A+RVVI+DP+WNP+ D QAQ+RS+R GQ + V ++RL+++G++EE +Y
Sbjct: 418 RVGGLGVNLIGADRVVIYDPDWNPSTDTQAQERSWRIGQTKQVTIYRLVTSGTIEEKIYH 477
Query: 652 RQVYKQQLSNIAVSGKLEKRYFE 674
RQ++KQ ++N + ++R+F+
Sbjct: 478 RQIFKQFMTNRVLKDPKQRRFFK 500
>gi|452839797|gb|EME41736.1| hypothetical protein DOTSEDRAFT_73948 [Dothistroma septosporum
NZE10]
Length = 1271
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 325/640 (50%), Gaps = 132/640 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I L ++Q+ GV++L++LY + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 447 RVPGDIYPSLFDYQKTGVQWLWELYAQQVGGIIGDEMGLGKTIQIISFLAGLH------- 499
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------L 238
K+DK V+++CP++V++ W EF RW VSI H M+
Sbjct: 500 ----YSGKIDKP--VVVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVRREESFE 553
Query: 239 EKLEACGV------------------------EVLITSFDSYRIHGSILSEVNWEIVIVD 274
+ LE G VL+T++ + + +L +W+ ++D
Sbjct: 554 DDLEEDGFSRKSTHSKGYKQAKRIVDKVLRDGHVLVTTYSGLQTYAELLIPTDWQYAVLD 613
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD+V P LGT +F+
Sbjct: 614 EGHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQ 673
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
++ P++ G A + A + + L + YLL+R K + L K + V+FC
Sbjct: 674 FEIPIRQGGYANASNLQVETAMKCAETLKDAISPYLLQRFKVDVAADLPK-KSERVLFCK 732
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
++ LQ+ AY L +++ ++ + L G D
Sbjct: 733 LTKLQRDAYEWFLNSEDMKSIM-----------------AGKRQALYGIDI--------- 766
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH +L++ + ++ + +G IG
Sbjct: 767 ---LRKICNHPDLVE---------HKTLSKKTNYKYG---------------IG----SK 795
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI-RKGYSFSRLDGSTPSNLRQS 573
CGKM+ ++ L+ W G K LLF+ MLDILEKF+ +G+++ R+DG+T RQ
Sbjct: 796 CGKMQVVKALLEIWKRNGHKTLLFAQHRIMLDILEKFVQGMEGFNYRRMDGNTSIKDRQD 855
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
LVD+FN P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 856 LVDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRE 915
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V ++RL++AG++EE +Y RQ++KQ LSN + +++ F+
Sbjct: 916 VEIYRLMTAGTIEEKIYHRQIFKQFLSNKILRDPKQRQTFQ------------------L 957
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI 733
RDL D LFT + S E GQ + T FKG E +
Sbjct: 958 RDLHD-LFT---LGSPMENGQTE-----TGSIFKGTEVRL 988
>gi|383861226|ref|XP_003706087.1| PREDICTED: DNA excision repair protein ERCC-6-like [Megachile
rotundata]
Length = 1127
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 302/560 (53%), Gaps = 61/560 (10%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ +VP SI +L +Q+ V++L++L+ GG+LGD+MGLGKT+Q IAFLA + +
Sbjct: 314 LFKVPQSIWKKLYRYQKVSVQWLWELHCRNQGGLLGDEMGLGKTVQVIAFLAGLDCSELL 373
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGP---NRDM--ILE 239
SD + G ++ICP+++++ W F W V + H N D+ ++
Sbjct: 374 SDG-----GRFRGLGPTIVICPATLMEQWVKHFHEWWPILRVVVLHQSGSYNGDLEYLIH 428
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L+ G+ L+TS+ S H IL W VI+DE H+++N ++K+ A E T +R+
Sbjct: 429 SLQCGGI--LVTSYSSMLNHKQILVSAEWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRL 486
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A + +
Sbjct: 487 LLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANASP----LQEATA 542
Query: 360 QHLVAVLRK----YLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
H+ +LR Y+LRRTK++ H+ + K + V+FC++++ QK+ Y++ L ++
Sbjct: 543 LHVATMLRDAITPYMLRRTKQDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLCSEDVSF 602
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
++++ G + +L L L++I NH +L
Sbjct: 603 VLHEKKYVETGRYRAR--------------------LLIALSALRKICNHPDLF------ 636
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
+ S D D+ N ES K GKM ++ L+ W +G +
Sbjct: 637 ----------VYSTPLDSDEDI---NMSEESLETFGYWKRSGKMIVVQSLLKIWKKQGHR 683
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAG 594
LLF+ +M+ ILE + + YS+ R+DG+TP + RQ + FN S VFL++TR G
Sbjct: 684 ALLFTQGRQMMHILESLVQHEKYSYLRMDGTTPMSQRQETIRLFNDDSSYFVFLLTTRVG 743
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL ANRV+I+DP+WNPA D QA++R++R GQ ++V ++RL++AG++EE +Y RQ+
Sbjct: 744 GLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQSKNVTIYRLITAGTIEEKIYHRQI 803
Query: 655 YKQQLSNIAVSGKLEKRYFE 674
+K LSN + ++R F+
Sbjct: 804 FKVLLSNKVLEDPRQRRLFK 823
>gi|367010744|ref|XP_003679873.1| hypothetical protein TDEL_0B05330 [Torulaspora delbrueckii]
gi|359747531|emb|CCE90662.1| hypothetical protein TDEL_0B05330 [Torulaspora delbrueckii]
Length = 1057
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/611 (33%), Positives = 306/611 (50%), Gaps = 127/611 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ K GGI+GD+MGLGKTIQ IAFLAA+ D
Sbjct: 270 KIPGDIFSLLFNYQKTCVQWLYELYQQKCGGIIGDEMGLGKTIQVIAFLAALHHSDMLD- 328
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILEK 240
G VLI+CP++V++ W E W I H G + + E
Sbjct: 329 ------------GPVLIVCPATVMKQWCNELHHWWPPLRAVILHAIGSGMGNKKSIAEED 376
Query: 241 LEACGV---------------------------------------EVLITSFDSYRIHGS 261
LE + +LIT++ RIH
Sbjct: 377 LEGLIMSSDPSQFSYEDFNNSAKVKGKLESNNNMQSLVDKVVNDGHILITTYVGLRIHRD 436
Query: 262 ILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVA 321
IL VNW ++DE H+++N S + + C LKT +RI L+GT +QN + EL++LFD++
Sbjct: 437 ILLNVNWGYAVLDEGHKIRNPDSDISLTCKRLKTHHRIILSGTPIQNNLNELWSLFDFIF 496
Query: 322 PGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH 381
PG LGT F++ + +P+ G A ++ + L ++ YLLRR K +
Sbjct: 497 PGKLGTLPVFQQQFVQPISMGGYANATNVQVQAGYKCAVALRDLISPYLLRRVKADVAKD 556
Query: 382 LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
L KE V+FC ++ Q++ Y L E L Q++ KR
Sbjct: 557 LPEKKE-MVLFCKLTQFQRKKYLEFLHSKE----------------LDQIKTGKRQ---- 595
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
VL + L++I NH PD ++ + A +G
Sbjct: 596 ---------VLFGIDILRKICNH-----------PDLLDREEKRHQASYG---------- 625
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-----G 556
D K GKM+ +++L+ W + K LLF+ S +MLDILE+F+ K G
Sbjct: 626 ---------DPKRSGKMQVVKQLLLLWHKQHHKTLLFTQSRQMLDILEEFVSFKDESLSG 676
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
F R+DG+T + RQSLVD+FN+ VFL++TR GGLG+NL ANR++IFDP+WNP+
Sbjct: 677 LKFLRMDGTTNISTRQSLVDEFNNG-DYDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPS 735
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE-- 674
D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N +S +KR+F+
Sbjct: 736 TDMQARERAWRIGQKREVSIYRLMVTGSIEEKIYHRQIFKQFLTNKILSDPKQKRFFKVN 795
Query: 675 GVQDCKEFQGE 685
+QD GE
Sbjct: 796 ELQDLFSLGGE 806
>gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
Length = 1052
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 334/631 (52%), Gaps = 94/631 (14%)
Query: 91 EQEQEKFGRHQLGQFQFDHTGP--FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFL 148
E+E+ K G+H G+ + TGP + P +++ + V + + +LL HQRE +++L
Sbjct: 181 EEEETKTGKHD-GEDEKVETGPKFYYPWDVTETASG--LLVSSFVLTQLLPHQRECLEWL 237
Query: 149 YKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPS 208
+KL++ GGILGDDMGLGKT+Q +FL ++ + + VL++CP+
Sbjct: 238 HKLHERGVGGILGDDMGLGKTVQLASFLGSL--------------HAARRLRTVLLLCPA 283
Query: 209 SVIQNWEIEFSRWSTF-NVSIYHGPNRDMILEKLEAC----------------------- 244
SV+ W E +W+ + V + H + C
Sbjct: 284 SVLLQWVRELHKWAPWMRVVLLHASGTGVSASSSSECYEQLIEDVFRFDDDEEEDVGDPG 343
Query: 245 -------GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
G V+I+++++ R + S+ W+ V++DE HR++N ++ + C +L+T +
Sbjct: 344 LRQDSPTGGGVVISTYENVRQYQSLFLTREWDYVVLDEGHRIRNPDAETTLVCKQLRTVH 403
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
RI L+GT +QN++ EL++LFD+V PG LGT F + + P++ G TA + + +A +
Sbjct: 404 RIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVLPIRAGGYATATKMQVLMAYK 463
Query: 358 RKQHLVAVLRKYLLRRTKEETIG-----HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
L +++ +LLRRTK+E + ++ GK++ ++FC ++ Q+ Y+R L PE+
Sbjct: 464 CALALKDLIQPFLLRRTKQEVMATDANSSMLPGKQEQILFCRLTQRQRALYKRFLASPEV 523
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP-N 471
++ +DL PF + L+ I NH +L+
Sbjct: 524 ASVLRRDLR-------------------------PF----RAISVLRHICNHPDLLATFG 554
Query: 472 PRDEPDKQRKD---AELASAVFGPDIDLVGGNAQNESFIGLSD-----VKSCGKMRALEK 523
DK+R+ E V G + G SD + GKM L+K
Sbjct: 555 DGGLADKKRQSYFKEEEEEEEGEEGFTNVAGLLDEDKEEGESDEPFGAASASGKMIVLQK 614
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
++ W + ++L+F+ + MLDILE F+ R G++ +RLDG+T RQ +D FN+ S
Sbjct: 615 VLTLWKEQKHRVLVFTQTRSMLDILESFMSRLGHACTRLDGTTGVAERQQRLDAFNAPDS 674
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
FL++TRAGG+G+NLV A+RVV+FDP+WNP+ D+QA++R++R GQ++ V V+RL++A
Sbjct: 675 NLFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQKPVTVYRLVTA 734
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
G++EE +Y RQ++KQ L++ + KR F
Sbjct: 735 GTIEEKIYHRQIFKQYLTSKVLHDAKRKRCF 765
>gi|406864834|gb|EKD17877.1| DNA repair protein rhp26 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1202
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 312/605 (51%), Gaps = 117/605 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 400 LKLPGDIYPALFDYQKTGVQWLGELYAQQVGGIVGDEMGLGKTIQIISFLAGLH------ 453
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
K+ + ++++ P++V++ W EF RW VSI H M
Sbjct: 454 -----YSKKLTRP--IIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVGSEGRM 506
Query: 237 ----------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
I++++ G VL+T++ + + +L V+W+ ++D
Sbjct: 507 DDSQEIYGRSNGKSKSSKAAKKIVDRVVKHG-HVLVTTYAGLQTYADVLIPVDWDYAVLD 565
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H+++N + + + C EL+T NR+ L+GT +QN ++EL++LFD+V P LGT +FR+
Sbjct: 566 EGHKIRNPNTAITIYCKELRTPNRVILSGTPLQNNLVELWSLFDFVFPMRLGTLVNFRQA 625
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
++ P+K G A + A + + L A + YLL+R K + L K + V+FC
Sbjct: 626 FEVPIKLGGYANATNLQVLTATKCAETLKAAISPYLLQRLKVDVASDLPK-KSEQVLFCK 684
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
++ Q+ AY L E+ ++++ +L G D
Sbjct: 685 LTKPQREAYEMFLSSDEMTSIMDRTR-----------------QSLYGIDI--------- 718
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH +L+ P + +P + +
Sbjct: 719 ---LRKICNHPDLLDPRLKGKPGYR-----------------------------WGNPNK 746
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLFS V ML+I+E+F+ G+++ R+DGST RQ+
Sbjct: 747 SGKMQVVKALLEMWKGFGHKTLLFSQGVLMLNIIEEFVKGLNGFNYLRMDGSTSIKERQT 806
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
LVD FN+ P VFL++T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQK+
Sbjct: 807 LVDRFNNDPDLHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKE 866
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE-----------GVQDCKEF 682
V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+ G D
Sbjct: 867 VTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQMKDLYDLFTLGGTDDGTTE 926
Query: 683 QGELF 687
GE+F
Sbjct: 927 TGEMF 931
>gi|449468564|ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
Length = 1221
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 209/718 (29%), Positives = 365/718 (50%), Gaps = 129/718 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P SI L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++FL A+
Sbjct: 384 LKIPQSIFDELFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHF----- 438
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
S I K + +I+CP ++++ W+ E +W I H
Sbjct: 439 -SNIYKPS--------IIVCPVTLVRQWKREARKWCPRLLAEILHDSAHDPTYKNMREKS 489
Query: 231 ---------------------GPNR-DMILEKLEACGVEVLITSFDSYRIHGSILSEVNW 268
G R D ++ ++ +LIT+++ R+ G L ++ W
Sbjct: 490 DGSDESEDSEGSDYRKNSQPKGTKRWDALINRVLRSESGLLITTYEQLRLLGDKLLDIEW 549
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
I+DE HR++N +++ + C +L+T +RI +TG+ +QNK+ EL++LFD+V PG LG
Sbjct: 550 GYAILDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGSPIQNKLKELWSLFDFVFPGKLGVL 609
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F + P+ G A + A L ++ YLLRR K + HL K +
Sbjct: 610 PVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLPK-KTE 668
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
+V+FC+++ Q+ YR L E++ +++ + ++L G D
Sbjct: 669 HVLFCSLTSEQRSVYRAFLASSEVKSILDGNR-----------------NSLSGIDV--- 708
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+++I NH +L+ E A PD GN +
Sbjct: 709 ---------MRKICNHPDLL---------------EREHAFQNPDY----GNPER----- 735
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
GKM+ +E+++ W +G ++LLF+ + +MLDILE+FL+ GY++ R+DG TP
Sbjct: 736 ------SGKMKVVEQVLKVWKEQGHRVLLFAQTQQMLDILERFLVGGGYTYRRMDGGTPV 789
Query: 569 NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
R +L+D+FN+S VF+++T+ GGLG NL A+RV+IFDP+WNP+ D+QA++R++R
Sbjct: 790 KQRMALIDEFNNSCEVFVFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRI 849
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF----QG 684
GQ+R V V+RL++ G++EE VY RQ+YK L+N + +KR+F+ +D K+ +
Sbjct: 850 GQQRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA-RDMKDLFTLNED 908
Query: 685 ELFG---ICNLFRDLSDNLFTSEIIESHEEQGQQQERHHC--TNQGFKGL-ETHIVSSKD 738
+ G N+F L+D++ ++ +E+ GQ+ + + L ++ I +S
Sbjct: 909 GMDGSTETSNIFSALTDSVNVVG-VQKNEKDGQKSSSGSVLFADSADENLCKSEIETSGR 967
Query: 739 SNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQ 796
S+++ G + ++ K L + GI A +D I+N G + + EE Q
Sbjct: 968 SSSIEGQGGGADEDTN-----ILKSLFDAHGIHSAVNHDIIINADDGEKIRLEEQASQ 1020
>gi|357134225|ref|XP_003568718.1| PREDICTED: DNA repair protein rhp26-like [Brachypodium distachyon]
Length = 1218
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 189/631 (29%), Positives = 327/631 (51%), Gaps = 120/631 (19%)
Query: 116 LVLSKDGEYPII-----QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
++ DG P+I ++P SI +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+
Sbjct: 379 VIEGSDGLPPVILEGGLRIPGSIYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTV 438
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIY 229
Q ++FL ++ +S + K + +++CP ++++ W E S+W F V I
Sbjct: 439 QVLSFLGSLH------ESGMYKSS--------IVVCPVTLLEQWRREASKWYPKFKVEIL 484
Query: 230 H----GPNR------------------------------DMILEKLEACGVEVLITSFDS 255
H G ++ D ++ ++ G +L+T+++
Sbjct: 485 HDSANGSSKKAKRSSDSESDFCSDSDQEEVTRAKPAKKWDALISRVVNSGSGLLLTTYEQ 544
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
RI L ++ W ++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++
Sbjct: 545 LRIMRDKLLDIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWS 604
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD+V PG LG F + P+K G A + A L ++ YLLRR K
Sbjct: 605 LFDFVFPGKLGVLPVFEIEFSVPIKVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMK 664
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
+ L K ++V+FC+++ Q+ YR L E++ + + +
Sbjct: 665 ADVNAQLPK-KTEHVLFCSLTPEQRATYRAFLASSEVEQIFDGNR--------------- 708
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
++L G D L++I NH +L+ E A PD
Sbjct: 709 --NSLYGIDV------------LRKICNHPDLL---------------EREHAAQDPDY- 738
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
GN + GKM+ +E+++ W +G ++LLF+ + +MLDILE FL
Sbjct: 739 ---GNPER-----------SGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDILENFLTAC 784
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
Y + R+DG TP+ R +L+D+FN++ +F+++T+ GGLG NL ANRV+IFDP+WNP
Sbjct: 785 DYPYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNP 844
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ D+QA++R++R GQ R V V+RL++ G++EE VY RQ+YK L+N + ++R+F+
Sbjct: 845 STDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKA 904
Query: 676 --VQDCKEFQGELFG----ICNLFRDLSDNL 700
++D Q E N+F LS+++
Sbjct: 905 RDMKDLFTLQDEDMNGSTETSNIFGQLSEDV 935
>gi|297744167|emb|CBI37137.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 318/606 (52%), Gaps = 93/606 (15%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P SI +L ++Q+ GV++L++L+ + GGI+GD+MGLGKTIQ ++FL A+ +
Sbjct: 391 LRIPESIFSKLFDYQKVGVQWLWELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYK 450
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--------STFNVSIYHGPNRDMIL 238
S ++ICP ++++ W+ E +W N+S D ++
Sbjct: 451 PS--------------IVICPVTLLRQWKREAKKWYQNSLDSDDEENLSSKDTKKWDSLI 496
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
++ +LIT+++ R+ L ++ W I+DE HR++N +++ + C +L+T +R
Sbjct: 497 NRVLRSQSGLLITTYEQIRLQAGKLLDIKWGYAILDEGHRIRNPNAEVTILCKQLQTVHR 556
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I +TG +QNK+ EL++LFD+V PG LG F + P+ G A + A
Sbjct: 557 IIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANATPLQVSTAYRC 616
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ YLLRR K + L K ++V+FC+++ Q+ YR L E++ +
Sbjct: 617 AVVLRDLIMPYLLRRMKADVNAQLP-NKTEHVLFCSLTTEQRSVYRAFLASSEVEQI--- 672
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
DG + + + + +++I NH +L+
Sbjct: 673 ---------------------FDGSRNSLYGIDV-----MRKICNHPDLL---------- 696
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
E A PD GN + GKM+ + ++ W +G ++LLF
Sbjct: 697 -----EREHAYQNPDY----GNPER-----------SGKMKVVAHVLKGWKEQGHRVLLF 736
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ + +MLDILE FLI GY + R+DG TP R +L+D+FN S +F+++T+ GGLG
Sbjct: 737 AQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFILTTKVGGLGT 796
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRV+I+DP+WNP+ D+QA++R++R GQ R V V+RL++ G++EE VY RQ+YK
Sbjct: 797 NLTGANRVIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHF 856
Query: 659 LSNIAVSGKLEKRYFEGVQDCKEF-----QGELFG--ICNLFRDLSDNLFTSEIIESHEE 711
L+N + +KR+F+ +D K+ GE N+F LS+++ ++ H++
Sbjct: 857 LTNKILKNPQQKRFFKA-RDMKDLFVLNDDGEDASTETSNIFSQLSEDV---NVVGKHKD 912
Query: 712 QGQQQE 717
+Q+
Sbjct: 913 SQDKQK 918
>gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans]
gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans CBS 6340]
Length = 1037
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 203/619 (32%), Positives = 319/619 (51%), Gaps = 130/619 (21%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L +Q+ V++LY+LY+ + GGI+GD+MGLGKTIQ IAFLA++
Sbjct: 259 FRIPGEIFQSLFNYQKTCVQWLYELYQQQCGGIIGDEMGLGKTIQIIAFLASLH------ 312
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGP------------- 232
K++ G +L++CP++V++ W EF + W F I H
Sbjct: 313 -----HSGKLN--GPILVVCPATVLRQWCKEFHTWWPPFRAIILHSIGAGMTQKENLSEQ 365
Query: 233 ---------------------------------NRDMILEKLEACGVEVLITSFDSYRIH 259
RD ++ K+ G VLIT++ RIH
Sbjct: 366 KLEELFMNSNPEEFSFDAYTNSKRTKSILESSLTRDNLINKVVTDG-HVLITTYVGLRIH 424
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
L V W ++DE H+++N + + + C +LKT+NRI L+GT +QN + EL++LFD+
Sbjct: 425 SDKLLNVRWGYAVLDEGHKIRNPDADISLTCKQLKTKNRIILSGTPIQNNLTELWSLFDF 484
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI 379
+ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 485 IFPGRLGTLPVFQQQFSVPINMGGYANATNIQVQTGYKCAVALRNLISPYLLRRIKADVA 544
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L K + V+FC ++ Q+ Y +Q L ++DL +++ KR
Sbjct: 545 KDLPR-KNEMVLFCKLTQYQRNKY--------LQFLNSEDL--------VKIKNGKRQ-- 585
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
VL + L++I NH +L++ R
Sbjct: 586 -----------VLFGIDILRKICNHPDLLEREQR-------------------------- 608
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG--- 556
QNE G D K GKM+ +++L+ W S+G K LLF+ S +MLDILE+F+ K
Sbjct: 609 --QNEDSYG--DPKRSGKMQVVKQLLKLWHSQGHKTLLFTQSRQMLDILERFISYKDPEL 664
Query: 557 --YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
++ R+DG+T RQ+LVD FN+ S VFL++TR GGLG+NL ANR++IFDP+WN
Sbjct: 665 EELTYLRMDGTTSIGARQALVDSFNNG-SYDVFLLTTRVGGLGVNLTGANRIIIFDPDWN 723
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
P+ D+QA++R++R GQ+R V ++RL+ AGS+EE +Y RQ++KQ L+N ++ +KR+F+
Sbjct: 724 PSTDMQARERAWRIGQRREVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILTDPKQKRFFK 783
Query: 675 --GVQDCKEFQGELFGICN 691
+QD GE G+ N
Sbjct: 784 MNELQDLFTLGGET-GLTN 801
>gi|345492169|ref|XP_001602814.2| PREDICTED: DNA excision repair protein ERCC-6-like [Nasonia
vitripennis]
Length = 1154
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 329/639 (51%), Gaps = 81/639 (12%)
Query: 60 NFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQ----------------EKFGRHQLG 103
+F+L ++ ET E P S+ +D EE+ ++ + E R ++
Sbjct: 232 SFNLDEEESETGSEYVP---SDEYDSEEETAKKSERRKKSITSKQILDDGDEDIYRQRVE 288
Query: 104 QFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDD 163
Q + P + + +VP + L ++Q+ VK++++L+ GG+LGD+
Sbjct: 289 QSDYKKNEPLHKV-------DNLFKVPLRVWKHLYKYQKVAVKWMWELHSRNLGGLLGDE 341
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWS 222
MGLGKT+Q IAFLA + D SD + G LI+CP+++++ W F W
Sbjct: 342 MGLGKTVQVIAFLAGLDCSDLLSDG-----GRFRGLGPSLIVCPATLLEQWVKHFHDWWP 396
Query: 223 TFNVSIYHGPNR-----DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
T I H D +L L+ G+ L+TS+ IH L + W VI+DE H
Sbjct: 397 TLRAVILHQSGTFQGDIDELLHTLKDGGI--LVTSYTGVLIHKEPLLKFKWHYVILDEGH 454
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
+++N +K+ T +RI LTG+ MQN + EL++LFD++ PG LGT F E
Sbjct: 455 KIRNPDAKVSKVVKAFLTPHRILLTGSPMQNSLKELWSLFDFILPGKLGTLPAFMEHCAG 514
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMS 396
P+ G A + A + L + Y+LRRTK + H+ + K + V+FC+++
Sbjct: 515 PITRGGYANASQLQEATALQVATMLKDAITPYMLRRTKFDVQHHVSLPDKNEQVLFCSLT 574
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
+ Q++ Y + L+ ++ +I+ + +G LV L
Sbjct: 575 EEQRQLYIQYLRSDDVSFVIH--------------------ERREGGRYRARLLV--ALT 612
Query: 457 KLQQISNH--LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH L L N ++E D+ DA L ++D +NE K
Sbjct: 613 ALRKICNHPDLFLYTDNNQEESDE---DAAL-------EVD------ENE-MEKFGHWKR 655
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
GKM + L+ W +G ++LLF+ S +M+ ILE L ++ Y++ R+DG+TP RQ
Sbjct: 656 AGKMTVVRSLLKIWKKQGHRVLLFTQSRQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLT 715
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
V FN PS VFL++TR GGLG+NL ANRV+I+DP+WNPA D QA++R++R GQ++ V
Sbjct: 716 VTKFNQDPSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQEKSV 775
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
V+RL++AG++EE +Y RQV+K LSN + ++R F
Sbjct: 776 TVYRLITAGTIEEKMYHRQVFKILLSNKVLEDPRQRRLF 814
>gi|302308020|ref|NP_984796.2| AEL065Cp [Ashbya gossypii ATCC 10895]
gi|299789257|gb|AAS52620.2| AEL065Cp [Ashbya gossypii ATCC 10895]
gi|374108017|gb|AEY96924.1| FAEL065Cp [Ashbya gossypii FDAG1]
Length = 1025
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 208/662 (31%), Positives = 332/662 (50%), Gaps = 139/662 (20%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y ++PA I +L +Q+ V++LY+L++ GGI+GD+MGLGKTIQ ++FLA++
Sbjct: 250 YDDFKIPADIFDKLFSYQKTCVQWLYELHQQNCGGIVGDEMGLGKTIQIVSFLASLHHSG 309
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDMILEK-- 240
+ KG VL++CP++V++ W EF + W F I H MI K
Sbjct: 310 KL-------------KGPVLVVCPATVMKQWCSEFQTWWPPFRAVILHSIGAGMITRKKM 356
Query: 241 -------------------------------LEAC-GVE-----------VLITSFDSYR 257
LEA G+E +LIT++ +
Sbjct: 357 TEEQLEELLMRDESNEFSYEQYANLGRTKKQLEARRGIESLVQKVVDDGHILITTYLGLQ 416
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
IH +L VNW+ ++DE H+++N + + + C L+T +RI L+GT +QN + EL++LF
Sbjct: 417 IHSDLLLHVNWDYAVLDEGHKIRNPDAGISLTCKRLRTPHRIILSGTPIQNNLTELWSLF 476
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
D++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 477 DFIFPGKLGTLPVFQQQFANPINAGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKND 536
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
+ + K + V+FC M+ QK Y +Q L ++D+ +++ +R
Sbjct: 537 -VAKDLPKKNEFVLFCKMTQFQKEKY--------LQFLNSEDM--------IKIKNGRRQ 579
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH PD +D FG
Sbjct: 580 -------------VLYGIDILRKICNH-----------PDLLERDFRKHEPSFG------ 609
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-- 555
D + GKM +++L+ +W +G K LLF+ S +MLDILE ++ K
Sbjct: 610 -------------DPRRSGKMTVIKQLLLTWKKQGHKALLFTQSRQMLDILEAYISHKDP 656
Query: 556 ---GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
G + R+DG+T RQ+LVD FN+ P +FL++TR GGLG+NL ANR++IFDP+
Sbjct: 657 ELAGLQYLRMDGTTNIAHRQALVDRFNNGPY-HLFLLTTRVGGLGVNLTGANRIIIFDPD 715
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ DLQA++R++R GQKR V ++ L+ AGS+EE +Y RQ++KQ L+N +S +KR+
Sbjct: 716 WNPSTDLQARERAWRIGQKRDVTIYLLMVAGSIEEKIYHRQIFKQFLTNKVLSDPKQKRF 775
Query: 673 FEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTN-----QGFK 727
F+ EL + + + + F SE IE ++Q H T+ Q F+
Sbjct: 776 FK--------MNELHDLFSFGPGAASDSFASE-IEQQTASLRRQPAAHGTDDYDSVQRFE 826
Query: 728 GL 729
G+
Sbjct: 827 GV 828
>gi|297836766|ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1181
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 214/694 (30%), Positives = 347/694 (50%), Gaps = 120/694 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ +P I +L E+QR GV++L++L+ + GGI+GD+MGLGKTIQ ++FL +
Sbjct: 373 LNIPECIFRKLFEYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGS-------- 424
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA-- 243
L +K+ K +IICP ++++ W E +W F+V I H +D K +
Sbjct: 425 ----LHFSKMYKPS--IIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKA 478
Query: 244 --------CGVE--------------------------VLITSFDSYRIHGSILSEVNWE 269
C V+ +LIT+++ R+ G L + W
Sbjct: 479 NESDYDSECSVDSDHEQKSKNTKKWDSLINRVLNSESGLLITTYEQLRLQGEKLLNIEWG 538
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
++DE HR++N S + + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 539 YAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLP 598
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
F + P+ G A + A L ++ YLLRR K + HL K ++
Sbjct: 599 VFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTK-KTEH 657
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
V+FC+++ Q+ YR L E++ + LDG + +
Sbjct: 658 VLFCSLTVEQRSTYRAFLASSEVEQI------------------------LDGNRNSLYG 693
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
+ + +++I NH +L+ E + PD GN +
Sbjct: 694 IDV-----MRKICNHPDLL---------------EREHSHQNPDY----GNPER------ 723
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSN 569
GKM+ + +++ W +G ++LLFS + +MLDILE FL+ YS+ R+DG TP
Sbjct: 724 -----SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVK 778
Query: 570 LRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
R +L+D+FN+S VF+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R G
Sbjct: 779 QRMALIDEFNNSDDVFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIG 838
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKE-FQGELFG 688
QK+ V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+ F + G
Sbjct: 839 QKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA-RDMKDLFILKDDG 897
Query: 689 ICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDS-NTLLSTGS 747
N + S N+F+ E + Q ++ Q L H + S T + T
Sbjct: 898 DSNASTETS-NIFSQLAEEINIVGAQSDKKPESATQ----LALHNTAEGSSEQTDVETTD 952
Query: 748 KTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVN 781
KT ++ D E K L + GI A +D I+N
Sbjct: 953 KTGEAMDEE-TNILKSLFDAHGIHSAVNHDTIMN 985
>gi|320587466|gb|EFW99946.1| DNA repair protein rhp26 [Grosmannia clavigera kw1407]
Length = 1202
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 209/669 (31%), Positives = 336/669 (50%), Gaps = 126/669 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L +Q+ V++L +LY K GGI+GD+MGLGKT+Q I+F+AA+
Sbjct: 396 LKLPGDIYPSLFGYQKTAVRWLAELYDIKVGGIIGDEMGLGKTVQLISFVAALH------ 449
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
++DK V+++ P++V++ W EF RW VSI H M
Sbjct: 450 -----YSKRLDKP--VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVHSEDLI 502
Query: 237 ----------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
I++++ G VL+T++ + +G IL V+W ++D
Sbjct: 503 EKDEISWGGSPLKRGSNVAAKAIVDRVVQHG-HVLVTTYAGLQTYGDILIPVDWGYAVLD 561
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H+++N + L + C EL+T NRI L+GT +QN + EL++LFD++ P LGT FR
Sbjct: 562 EGHKIRNPNTALTVYCKELRTPNRIILSGTPIQNNLTELWSLFDFIYPMRLGTLVTFRNQ 621
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
++ P++ G A I A + + L + YLL+RTK + L K + V+FC
Sbjct: 622 FEIPIRLGGYANATNLQIMTAQKCAETLKDAISPYLLQRTKADVATDLPK-KSEQVLFCK 680
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
+++ Q++AY L+ E+ ++N+ +L G D
Sbjct: 681 LTESQRQAYELFLRSDEMSAILNR-----------------ARQSLYGIDI--------- 714
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH +L +P + E + S KS
Sbjct: 715 ---LRKICNHPDLAEPQLK----------------------------HKEGYNWGSPSKS 743
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG-YSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF +MLDILE F G + R+DG TP RQ+
Sbjct: 744 -GKMQVVKALLQMWKRFGHKTLLFCQGTQMLDILEIFTQSLGDIQYLRMDGKTPIKDRQT 802
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
LVD FN+ P VFL++T+ GGLG+NL A+RV+IFDP+WNP+ D+QA++R++R GQKR
Sbjct: 803 LVDRFNNDPQLNVFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARERAWRLGQKRQ 862
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
V ++RL++AG++EE +Y RQ++KQ L+N + ++ F G+ D +LF + +
Sbjct: 863 VTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQRASF-GLHDLH----DLFSLGSYE 917
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSS 753
+++ TSE+ +E H T G + + I + +++ G T +S
Sbjct: 918 DGVTE---TSELFRGNEV--------HITPSGTRRM---ITPGPGAVPIVTIGKSTPQSL 963
Query: 754 DP-EMARTS 761
DP ART
Sbjct: 964 DPIRTARTG 972
>gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14]
Length = 938
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/613 (31%), Positives = 325/613 (53%), Gaps = 105/613 (17%)
Query: 90 KEQEQEKFGRHQLGQFQ--FDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKF 147
K Q+ ++ G Q GQ F++ P + + L+ G + VP I +L HQR+ +++
Sbjct: 108 KLQDTKESGCEQNGQVNRGFEYYQPGD-VYLTDSG----LAVPTYIYAQLYPHQRQCLEW 162
Query: 148 LYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICP 207
L+ L++ GGILGD+MGLGKT++ +A++AA+ G + VL++CP
Sbjct: 163 LHWLHERNTGGILGDEMGLGKTVEIVAYVAAMHG--------------AHRLRSVLLLCP 208
Query: 208 SSVIQNWEIEFSRW-STFNVSIYHGPNRDMIL----------EKLEACGVE--------- 247
+SV+ W EF +W +++ H ++L E +E E
Sbjct: 209 ASVLLQWTREFHKWYPKMRITLLHSTGSGVVLSNKSYTELVHEIVENHRREDTSQQADNF 268
Query: 248 -----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
V++T++++ R + +L ++W+ V++DE HR++N + + + C + +T +R+ LT
Sbjct: 269 TGTGGVILTTYENARQNQQLLLNIDWDYVVLDEGHRIRNPDADISLVCKQFRTVHRLILT 328
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + EL++LFD+V PG LGT F + + P+K G A + + +A + L
Sbjct: 329 GTPIQNHLRELWSLFDFVYPGKLGTLPTFEDEFVLPIKTGGYANASKMQVVMAYKCALVL 388
Query: 363 VAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
V+ Y+LRRTK+E L + K ++++FC ++ Q Y L+ PE+ +++ +L
Sbjct: 389 RDVINPYMLRRTKKEIQDTLELPEKMEHILFCRLTAYQHDQYEAYLRSPEVARVLSYELR 448
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
PF + L+ + NH +L+K DE +
Sbjct: 449 -------------------------PF----RAISTLRHLCNHPDLVK-RAGDEASR--- 475
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
S FG ++ GKM L K++ W +G ++LLF+ +
Sbjct: 476 -----SENFG-------------------SIEKSGKMLVLCKILAMWKDQGHRVLLFTQT 511
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
MLDILE+ + GY+ RLDGSTP RQ L+D FN + S +FL++TRAGG+G+NL
Sbjct: 512 RMMLDILERLMEHLGYNHCRLDGSTPVKERQRLLDKFNDAESGIFIFLLTTRAGGIGINL 571
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
ANRVVIFDP+WNP+ D+QA++RS+R GQ + V ++RL+++G++EE +Y RQ++KQ L+
Sbjct: 572 AGANRVVIFDPDWNPSTDMQARERSWRIGQIKQVTIYRLITSGTIEEKIYHRQIFKQYLT 631
Query: 661 NIAVSGKLEKRYF 673
+ KR F
Sbjct: 632 TKVLHDPKRKRCF 644
>gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus]
Length = 983
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 295/541 (54%), Gaps = 57/541 (10%)
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN-KVDKKGY 201
+ V++L++L+ K GG++GD+MGLGKT+Q IAFLA + S +L N + G
Sbjct: 201 DSVQWLWELHSRKLGGLMGDEMGLGKTVQVIAFLAGL------DCSELLSHNGRYRGLGP 254
Query: 202 VLIICPSSVIQNWEIEFSRW-STFNVSIYH---GPNRD--MILEKLEACGVEVLITSFDS 255
+++CP+++++ W F W F V + H G N D ++E L+ G+ L+TS++
Sbjct: 255 TIVVCPATLMEQWVKHFHDWWPFFRVVVLHHSGGYNGDPESLIESLQTGGI--LVTSYNG 312
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
H +L W VI+DE H+++N ++K+ A + T +R+ L+G+ MQN + EL++
Sbjct: 313 ILKHKDLLVSSQWHYVILDEGHKIRNPQAKVSRAVKQFSTPHRLLLSGSPMQNSLKELWS 372
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD++ PG LGT F E P+ G A A + L + Y+LRRTK
Sbjct: 373 LFDFILPGKLGTLPVFLEHCATPITRGGYANATSLQEATALQVATMLKDTITPYMLRRTK 432
Query: 376 EETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
+ HL + K + V+FC+++D QK+ Y++ L C +T +
Sbjct: 433 NDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYL----------------CSEDVTFI--- 473
Query: 435 KRLDNLDGCDSCPF-CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
L + D+ + L L L++I NH +L L + F D
Sbjct: 474 --LHEKNNHDTGRYRARFLIALSALRKICNHPDLF----------------LYTREFDSD 515
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI 553
D+ Q E F K GKM + L+ W + ++LLF+ +M+ ILE L
Sbjct: 516 EDITLSEEQLEKF---GYWKRAGKMNVVRSLLKIWHKQQHRVLLFTQGRQMMHILESLLQ 572
Query: 554 RKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNW 613
R+GY++ R+DG+T + RQ + FN+ PS VFL++TR GGLG+NL+ A+RV+I+DP+W
Sbjct: 573 REGYTYLRMDGTTAMSQRQQTIHTFNNRPSYFVFLLTTRVGGLGVNLIGADRVIIYDPDW 632
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
NPA D QA++R++R GQ + V V+RL++AG++EE +Y RQ++K LSN + ++R F
Sbjct: 633 NPATDAQARERAWRIGQNKQVTVYRLITAGTIEEKMYHRQIFKLLLSNKVLDDPRQRRLF 692
Query: 674 E 674
+
Sbjct: 693 K 693
>gi|414876754|tpg|DAA53885.1| TPA: hypothetical protein ZEAMMB73_561597 [Zea mays]
Length = 1198
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/607 (30%), Positives = 319/607 (52%), Gaps = 115/607 (18%)
Query: 111 GPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTI 170
G P++L +++P +I +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+
Sbjct: 364 GGLSPVILEGG-----LRIPGTIYEQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTV 418
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIY 229
Q ++FL ++ +S + K + +++CP +++Q W+ E SRW F V I
Sbjct: 419 QVLSFLGSLH------NSGMYKPS--------IVVCPVTLLQQWQREASRWYPKFKVEIL 464
Query: 230 H----GPNR------------------------------DMILEKLEACGVEVLITSFDS 255
H G ++ D ++ ++ G +L+T+++
Sbjct: 465 HDSANGSSKKSKAYSDSDSEGSWDSDQEEVRRAKPAKKWDDLISRVVNSGSGLLLTTYEQ 524
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
RI G L ++ W ++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++
Sbjct: 525 LRILGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWS 584
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD+V PG LG F + P+ G A + A L ++ YLLRR K
Sbjct: 585 LFDFVFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAIVLRDLIMPYLLRRMK 644
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
+ L K ++V+FC+++ Q+ YR L E++ + + +
Sbjct: 645 VDVNAQLPK-KTEHVLFCSLTAGQRSTYRAFLASSEVEQIFDGNR--------------- 688
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
++L G D L++I NH +L+ E A PD
Sbjct: 689 --NSLYGIDV------------LRKICNHPDLL---------------EREHAAQNPDY- 718
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK 555
GN + GKM+ +E+++ W +G ++LLF+ + +MLDILE FL
Sbjct: 719 ---GNPER-----------SGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILENFLTAC 764
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
Y + R+DG TP+ R +L+D+FN++ VF+++T+ GGLG NL ANR++I+DP+WNP
Sbjct: 765 DYQYRRMDGLTPAKQRMALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNP 824
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+ D+QA++R++R GQ R V+V+RL++ G++EE VY RQ+YK L+N + ++R+F+
Sbjct: 825 STDMQARERAWRIGQTRDVMVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFK- 883
Query: 676 VQDCKEF 682
+D K+
Sbjct: 884 ARDMKDL 890
>gi|396491459|ref|XP_003843573.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
Length = 1224
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 303/584 (51%), Gaps = 108/584 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ GV++L++LY GGI+GD+MGLGKTIQ I+F+A
Sbjct: 405 FRIPGDIYPALFDYQKTGVQWLWELYSQNVGGIIGDEMGLGKTIQAISFVAG-------- 456
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
L +K+ K V+++CP++V++ W EF RW VSI H M
Sbjct: 457 ----LHYSKLLTK-PVIVVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTQREDRM 511
Query: 237 -------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIV 271
ILEK++ G VL+T++ + + L WE
Sbjct: 512 ERELELRSYGDYDTTLTGAGKAAKKILEKVKRDG-HVLVTTYSGLQTYSEFLIPTEWECA 570
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE H+++N + + + C EL+T NRI L+GT MQN + EL++LFD+V P LGT +F
Sbjct: 571 ILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNF 630
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R ++ P+K G A A + L + YLL+R K + L KE V+
Sbjct: 631 RNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKVDVATDLPQKKE-QVL 689
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC ++ Q+ AY L +++ + + + + L G D
Sbjct: 690 FCKLTRQQRAAYEGFLASNDMKSITDG-----------------KRNMLFGVDY------ 726
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L+++ NH +L + ++ S G D A N S
Sbjct: 727 ------LRKVCNHPDLT-------------EHKILSKKPGYDY-----GAPNRS------ 756
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNL 570
GKM+ +++L+ W G K LLF+ MLDIL+KF+ G ++ R+DG TP
Sbjct: 757 ----GKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSHLPGINWRRMDGETPIKE 812
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ+LVD+FN++P VFL++T+ GGLG+NL ANRV+I+DP+WNP+ D+QA++RS+R GQ
Sbjct: 813 RQNLVDEFNNNPDLDVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQ 872
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
KR V ++RL+SAG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 873 KREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTFQ 916
>gi|407927052|gb|EKG19957.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1254
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 303/583 (51%), Gaps = 107/583 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP I L ++Q+ GV++L++LY + GGI+GD+MGLGKT+Q I+F+A +
Sbjct: 427 FKVPGDIYPNLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTVQAISFVAGLH------ 480
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM--------- 236
K+ K V+++CP++V++ W EF + W VSI H M
Sbjct: 481 -----YSGKLTKP--VIVVCPATVMKQWVTEFHTWWPALRVSILHSSGSGMMDVKRESQI 533
Query: 237 ------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVI 272
I++++ G VL+T++ +G L WE I
Sbjct: 534 ERDIESRTFNNRKRLSKSERAAKKIVDRVRTDG-HVLVTTYSGLASYGEFLIPTEWEYAI 592
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N S++ + C EL+T NR+ L+GT MQN ++EL++LFD++ P LGT FR
Sbjct: 593 LDEGHKIRNPDSRVTIYCKELRTANRLILSGTPMQNNLVELWSLFDFIYPMRLGTLPEFR 652
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P++ G A + A + + L + YLL+R K + L K + V+F
Sbjct: 653 NQFENPIRFGGYANASNLQVETAMQCAEILKETISPYLLQRFKVDVAADLPK-KTERVLF 711
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ Q++AY L+ PE+ + L+G F + +
Sbjct: 712 CRLTVTQRQAYEDFLKSPEMNSI------------------------LEGKRQALFGIDI 747
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L+++ NH +LI + + + D + S
Sbjct: 748 -----LRKVCNHPDLI----HHKSARHKSDPKYGSG------------------------ 774
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG-YSFSRLDGSTPSNLR 571
GKM+ +++L+ W KG K LLF+ MLDILE+F+ + ++ R+DGST R
Sbjct: 775 SKSGKMQVVKELVQMWKKKGHKTLLFAQHRIMLDILERFVKKAADINYLRMDGSTNIKDR 834
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q LVD FN+ + VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 835 QDLVDRFNNDSNMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 894
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 895 REVEIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 937
>gi|224085664|ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1206
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 321/624 (51%), Gaps = 125/624 (20%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P +I +L ++Q+ GV++L++L+ + GGI+GD+MGLGKTIQ ++FL A+ +
Sbjct: 381 LKIPEAIFSKLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYK 440
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI----LEKL 241
S +++CP ++++ W+ E +W F+V + H +D+ L+K
Sbjct: 441 PS--------------IVVCPVTLLRQWKREAQKWYPRFHVELLHDSAQDVSCRDPLKKK 486
Query: 242 EA------CGVE--------------------------------VLITSFDSYRIHGSIL 263
A C E +LIT+++ R+ G L
Sbjct: 487 RAQSYESDCETEDSLDSDYEGSISCRKANKWDSLINRVFESDSGLLITTYEQLRLLGEKL 546
Query: 264 SEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPG 323
+ W ++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG
Sbjct: 547 LDFEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPG 606
Query: 324 SLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLM 383
LG F + P+ G A + A L ++ YLLRR K + HL
Sbjct: 607 KLGVMPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKMDVNAHLP 666
Query: 384 MGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGC 443
K ++V+FC+++ Q+ YR L E++ + LDG
Sbjct: 667 K-KTEHVLFCSLTSEQRSVYRAFLASTEVENI------------------------LDGS 701
Query: 444 DSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQN 503
+ + + + +++I NH +L+ E + PD GN +
Sbjct: 702 RNSLYGIDV-----MRKICNHPDLL---------------EREHSYHNPDY----GNPER 737
Query: 504 ESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLD 563
GKM+ + +++ W +G ++LLF+ + +MLDI E FL GY++ R+D
Sbjct: 738 -----------SGKMKVVAQVLKVWQEQGHRVLLFTQTQQMLDIFENFLNSGGYNYRRMD 786
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
GSTP LR S++D+FN+S +F+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++
Sbjct: 787 GSTPIKLRMSIIDEFNNSGDIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARE 846
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF- 682
R++R GQK+ V V+RL++ G++EE VY RQ+YK L+N + ++R+F +D K+
Sbjct: 847 RAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFR-ARDMKDLF 905
Query: 683 ------QGELFGICNLFRDLSDNL 700
+G N+F LS+++
Sbjct: 906 TLNDDGEGGSTETSNIFSQLSEDV 929
>gi|403217339|emb|CCK71833.1| hypothetical protein KNAG_0I00420 [Kazachstania naganishii CBS
8797]
Length = 1085
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 304/600 (50%), Gaps = 128/600 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I+ L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAFLA++
Sbjct: 303 KVPGEIHSLLFNYQKTCVQWLYELYQQNCGGIVGDEMGLGKTIQVIAFLASLH------H 356
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G +LI+CP++V++ W EF W
Sbjct: 357 SGLLN-------GPILIVCPATVMKQWCNEFHIWWPPFRAVILHSMGSGMTQNRRTLNEE 409
Query: 222 ----------------------STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIH 259
S SI G D ++EK+ G V+IT++ RIH
Sbjct: 410 QLEEIIMNSNPDDISYSDLQNPSKLKTSIESGTAIDSLIEKIVNDG-HVVITTYVGLRIH 468
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
L +V W ++DE H+++N S + + C +LKT NRI L+GT +QN + EL++LFD+
Sbjct: 469 SDKLLKVKWAYAVLDEGHKIRNPDSDISLTCKKLKTPNRIILSGTPIQNNLNELWSLFDF 528
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI 379
+ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 529 IFPGKLGTLPVFQQQFVLPINMGGYANASNVQVQTGYKCAVALRDLISPYLLRRVKSDVA 588
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L KE V+FC ++ QK Y L S L Q+ KR
Sbjct: 589 KDLPEKKE-MVLFCKLTQYQKNKYMEFLN----------------SSELDQIRGGKRH-- 629
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
VL + L++I NH +L++ N +
Sbjct: 630 -----------VLYGIDILRKICNHPDLLEKNEK-------------------------- 652
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSF 559
QN G + K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ F
Sbjct: 653 --QNTRDYG--NPKRSGKMQVVKQLILLWKKQGHKTLLFTQSRQMLDILERFVSVNDPEF 708
Query: 560 S-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
S R+DG+T + RQ+LVD FN P +FL++TR GGLG+NL ANR++IFDP+WN
Sbjct: 709 SDIRYLRMDGTTNISKRQNLVDQFNKGPF-DLFLLTTRVGGLGINLTGANRIIIFDPDWN 767
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
P+ DLQA++R++R GQKR V ++RL+ +G++EE +Y RQ++KQ L+N ++ +KR+F+
Sbjct: 768 PSTDLQARERAWRIGQKREVSIYRLMVSGTIEEKIYHRQIFKQFLTNKILNDPRQKRFFK 827
>gi|225438089|ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
Length = 1227
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 321/633 (50%), Gaps = 120/633 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P SI +L ++Q+ GV++L++L+ + GGI+GD+MGLGKTIQ ++FL A+ +
Sbjct: 391 LRIPESIFSKLFDYQKVGVQWLWELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYK 450
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG 245
S ++ICP ++++ W+ E +W +F+V I H +D K A
Sbjct: 451 PS--------------IVICPVTLLRQWKREAKKWYQSFHVEILHDSAQDPASRKKRAKS 496
Query: 246 VE----------------------------------VLITSFDSYRIHGSILSEVNWEIV 271
E +LIT+++ R+ L ++ W
Sbjct: 497 YESEDSLDSDDEENLSSKDTKKWDSLINRVLRSQSGLLITTYEQIRLQAGKLLDIKWGYA 556
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG F
Sbjct: 557 ILDEGHRIRNPNAEVTILCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVF 616
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
+ P+ G A + A L ++ YLLRR K + L K ++V+
Sbjct: 617 EAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLP-NKTEHVL 675
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC+++ Q+ YR L E++ + DG + + +
Sbjct: 676 FCSLTTEQRSVYRAFLASSEVEQI------------------------FDGSRNSLYGID 711
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
+ +++I NH +L+ E A PD GN +
Sbjct: 712 V-----MRKICNHPDLL---------------EREHAYQNPDY----GNPER-------- 739
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
GKM+ + ++ W +G ++LLF+ + +MLDILE FLI GY + R+DG TP R
Sbjct: 740 ---SGKMKVVAHVLKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHR 796
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
+L+D+FN S +F+++T+ GGLG NL ANRV+I+DP+WNP+ D+QA++R++R GQ
Sbjct: 797 MALIDEFNDSDDVFIFILTTKVGGLGTNLTGANRVIIYDPDWNPSTDMQARERAWRIGQT 856
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF-----QGEL 686
R V V+RL++ G++EE VY RQ+YK L+N + +KR+F+ +D K+ GE
Sbjct: 857 RDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKA-RDMKDLFVLNDDGED 915
Query: 687 FG--ICNLFRDLSDNLFTSEIIESHEEQGQQQE 717
N+F LS+++ ++ H++ +Q+
Sbjct: 916 ASTETSNIFSQLSEDV---NVVGKHKDSQDKQK 945
>gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1655
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 307/561 (54%), Gaps = 86/561 (15%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L E+Q V++LY+L+ + GGI+GD+MGLGKT+Q ++FLA++
Sbjct: 785 FKIPFDIYKNLFEYQVTCVRWLYELHCQETGGIVGDEMGLGKTVQIVSFLASLHYSRRLG 844
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN----------RD 235
G LI+ P++++ NW EF +W F V ++H ++
Sbjct: 845 -------------GPALIVAPATLLSNWIKEFHKWWPPFRVGLFHSSGSGGGGNDGSDKE 891
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I++K+ G +L+T+FDS RI+ IL + +WE VI+DE H+++N +++ ++C +L+T
Sbjct: 892 DIVKKIAEKG-HILLTTFDSIRINQEILLKYHWEYVILDEGHKIRNPDAEITLSCKQLQT 950
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
+R+ L+G+ +QNK+ EL++LFD+V PG LGT F+ + P+ G A ++ A
Sbjct: 951 PHRVILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAA 1010
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L ++ Y+LRR K + + L K + V+ C ++ Q++ Y L +I+ +
Sbjct: 1011 YKCAVALRDLISPYMLRRVKSDVLKSL-PSKNEQVLMCPLTPFQEKLYLEFLDSNDIKSV 1069
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
++ R + L G D L++I NH +++ + DE
Sbjct: 1070 LD-----------------GRRNALYGIDI------------LKKICNHPDILHMDASDE 1100
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+++ K++ +E ++ W +GDK+
Sbjct: 1101 DRPH----------------------------DYGNIERSAKLKVVETILPLWFKQGDKV 1132
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFS--RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRA 593
LLF + +MLDI+E++ IR F+ R+DG+T RQ LV+ FN PS +FL++T+
Sbjct: 1133 LLFCQTRQMLDIVEQY-IRDSTQFNYLRMDGTTSIRQRQCLVEQFNIDPSLFIFLLTTKV 1191
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLGLNL ANRV++FDP+WNP+ D+QA++R +R GQK+ V ++RL++ G++EE +Y RQ
Sbjct: 1192 GGLGLNLTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQ 1251
Query: 654 VYKQQLSNIAVSGKLEKRYFE 674
+YKQ L+N + +KR+F+
Sbjct: 1252 IYKQFLTNKILKDPRQKRFFK 1272
>gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus]
Length = 1288
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 326/611 (53%), Gaps = 76/611 (12%)
Query: 132 SINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
I RL + QR GV+++++L++ GGI+GD+MGLGKT+Q AFL A+ G S+++
Sbjct: 414 GIAQRLFQFQRTGVRWMWQLHRQGAGGIVGDEMGLGKTVQVSAFLGALHG------SSVM 467
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-------------TFN-VSIYHGPNRDMI 237
+ LI+CP++V+ +W E W+ FN VS G R +I
Sbjct: 468 R--------RALILCPATVLSHWMAELHIWAPQLRVVVLHRCVQAFNAVSGNSGKLRALI 519
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
L V V++ S++ + + L NW+ ++DE R++N +++ + C +++T +
Sbjct: 520 RRILGWPEV-VVVASYEGMKSLKAFLLPCNWDYCVLDEGQRIRNPDAEVTLICKQIRTVH 578
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTGT +QN + EL++LFD+V PG LGT F + P++ G A R+A
Sbjct: 579 RLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQARLAYR 638
Query: 358 RKQHLVAVLRKYLLRRTKE--ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
L +++ YLLRR K+ E I HL K + V+FC ++ Q+R Y L+ E++ +
Sbjct: 639 CALVLRDLIQPYLLRRQKKDLEDIIHLP-AKTEQVLFCRLTSYQRRLYSEFLESTEVKSV 697
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+++ + + + + C D + C F + + QI D
Sbjct: 698 LSRTMRAFRAIGILR-KLCNHPDLV-----CRFGDSVVTRLASHQIWG-------GDSDA 744
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
+K+ D S + N+ +V+ GK+ L++++ W +G ++
Sbjct: 745 SEKEEDDTAEES------------KSDNDH-----EVQRSGKLLVLQQILPLWHKQGHRV 787
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLFS + +ML I+E+F++ +S+ RLDGSTP RQ+L+D FN+ S + L++TR GG
Sbjct: 788 LLFSQTRQMLSIIERFVVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGG 847
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+G+NL A+RV++FDP+WNP+ D+QA++RS+R GQ+R V V+RL++AG++EE +Y RQ++
Sbjct: 848 VGVNLTGADRVILFDPDWNPSTDMQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIF 907
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELF-----GICNLFRDLSDNLFTSEI---IE 707
K L+N + ++R F + G+LF G + F D D LF E
Sbjct: 908 KTALTNRVLQDPKQRRMFSA-----DELGDLFTLGDDGASDGFTDTID-LFQGEGRVRFP 961
Query: 708 SHEEQGQQQER 718
E+QG R
Sbjct: 962 QGEQQGSNSRR 972
>gi|147765952|emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
Length = 1249
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 321/633 (50%), Gaps = 120/633 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P SI +L ++Q+ GV++L++L+ + GGI+GD+MGLGKTIQ ++FL A+ +
Sbjct: 413 LRIPESIFSKLFDYQKVGVQWLWELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYK 472
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG 245
S ++ICP ++++ W+ E +W +F+V I H +D K A
Sbjct: 473 PS--------------IVICPVTLLRQWKREAKKWYQSFHVEILHDSAQDPASRKKRAKS 518
Query: 246 VE----------------------------------VLITSFDSYRIHGSILSEVNWEIV 271
E +LIT+++ R+ L ++ W
Sbjct: 519 YESEDSLDSDDEENLSSKDTKKWDSLINRVLRSQSGLLITTYEQIRLQAGKLLDIKWGYA 578
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG F
Sbjct: 579 ILDEGHRIRNPNAEVTILCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVF 638
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
+ P+ G A + A L ++ YLLRR K + L K ++V+
Sbjct: 639 EAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLP-NKTEHVL 697
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC+++ Q+ YR L E++ + DG + + +
Sbjct: 698 FCSLTTEQRSVYRAFLASSEVEQI------------------------FDGSRNSLYGID 733
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
+ +++I NH +L+ E A PD GN +
Sbjct: 734 V-----MRKICNHPDLL---------------EREHAYQNPDY----GNPER-------- 761
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
GKM+ + ++ W +G ++LLF+ + +MLDILE FLI GY + R+DG TP R
Sbjct: 762 ---SGKMKVVAHVLKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHR 818
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
+L+D+FN S +F+++T+ GGLG NL ANRV+I+DP+WNP+ D+QA++R++R GQ
Sbjct: 819 MALIDEFNDSDDVFIFILTTKVGGLGTNLTGANRVIIYDPDWNPSTDMQARERAWRIGQT 878
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF-----QGEL 686
R V V+RL++ G++EE VY RQ+YK L+N + +KR+F+ +D K+ GE
Sbjct: 879 RDVTVYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQKRFFKA-RDMKDLFVLNDDGED 937
Query: 687 FG--ICNLFRDLSDNLFTSEIIESHEEQGQQQE 717
N+F LS+++ ++ H++ +Q+
Sbjct: 938 ASTETSNIFSQLSEDV---NVVGKHKDNQDKQK 967
>gi|389630280|ref|XP_003712793.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|351645125|gb|EHA52986.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|440469732|gb|ELQ38833.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae Y34]
Length = 1197
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 304/594 (51%), Gaps = 111/594 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ GV++L +LY+ GGI+GD+MGLGKT+Q I+F+AA
Sbjct: 380 LKLPGDIYPALFDYQKTGVRWLAELYEQNVGGIVGDEMGLGKTVQLISFVAA-------- 431
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
L +K KK V+++ P++++Q W EF RW VSI H M
Sbjct: 432 ----LHYSKKLKKP-VIVVAPATLLQQWVNEFHRWWPPLRVSILHSSGSGMYDIRNEGRI 486
Query: 237 ---------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWE 269
I++++ G VL+T++ + +G IL V W+
Sbjct: 487 EDDDDGYSSDESTQKSKKSKGAAAAKRIVDRVVESG-HVLVTTYAGLQTYGDILIPVEWD 545
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
++DE H+++N + L + C EL+T NR+ L+GT +QN ++EL++LFD++ P LGT
Sbjct: 546 YAVLDEGHKIRNPNTSLTVYCKELRTPNRVILSGTPIQNNLVELWSLFDFIYPMRLGTLH 605
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
FR + P+K G A I A + + L + YLL+R K + L K +
Sbjct: 606 EFRNNIEIPIKMGGYANATNLQIMAAQKCAETLKDAISPYLLQRVKADVATDLPK-KSEQ 664
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
V+FC +++ Q++AY + L + Q+ R +L G D
Sbjct: 665 VLFCRLTESQRQAYEQFL----------------ASQAMDQILSGTR-KSLFGIDY---- 703
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
L+++ NH +L++P+ R N+
Sbjct: 704 --------LRKVCNHPDLVEPSLR-----------------------------NDHHYNW 726
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG-YSFSRLDGSTPS 568
GKM+ ++ L+ W G K LLFS +MLDILE F+ ++ ++ R+DG T
Sbjct: 727 GSANKSGKMQVVKALLQMWKKFGHKTLLFSQGTQMLDILEDFVRKQDDITYLRMDGKTAI 786
Query: 569 NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
RQ++VD FN+SP +FL++T+ GGLG NL A+RV+I+DP+WNP+ D+QA++R++R
Sbjct: 787 KDRQAMVDQFNNSPGIDLFLLTTKVGGLGTNLTGADRVIIYDPDWNPSTDVQARERAWRL 846
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
GQK+ V ++RL++AG++EE +Y RQ++KQ L+N + ++ F + D +
Sbjct: 847 GQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRTAFATMNDLHDL 900
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 302/552 (54%), Gaps = 80/552 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++PA I RL +Q+ GV++L++L+ GGI+GD+MGLGKTIQ I LA++ S
Sbjct: 188 LRLPADIYDRLFPYQQVGVQWLWELHCQGVGGIVGDEMGLGKTIQVIVLLASL------S 241
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MILEKLE 242
S +L G V I+ P++++ W+ EF+ W +F V I H D I+E +
Sbjct: 242 YSHLLP-------GPVCIVAPATLLSQWKREFATWWPSFRVRIMHKSAGDGDLWIVEDII 294
Query: 243 ACGVEVLITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G ++L+TS++ R H IL W+ VI+DE HR++N +++ + C KT +RI +
Sbjct: 295 EQG-DILVTSYEQVRRFHEYILVH-KWDYVILDEGHRIRNPDAEITLVCKRFKTVHRIIM 352
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TG +QN++ EL++LFD+V PG LGT F E + P+ G L A + A +
Sbjct: 353 TGAPLQNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQVHTAYKCASV 412
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L ++ YLLRR K++ + + K++ ++FC ++ Q+ Y++ L E+Q ++ +
Sbjct: 413 LRNLVSPYLLRRLKKD-VALQLPKKQEQILFCKLTKEQRELYKKYLNSRELQKVLQGSVN 471
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+L + L++I NH +L N ++ R+
Sbjct: 472 -----------------------------MLTAVSVLRKICNHPDLYDENALED---DRR 499
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
E A GK+ L++++ SW+ ++L+FS S
Sbjct: 500 YGEWTRA---------------------------GKLVVLDQVLLSWSKDDSRVLIFSQS 532
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLV 601
MLDILE F ++ Y++ R+DG T R L+D FN +FL++T+ GGLG+NL
Sbjct: 533 RAMLDILEMFARQRRYTYLRMDGETAMQERMKLIDSFNQDDEVFLFLLTTKVGGLGINLT 592
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
ANRVV++DP+WNP+ DLQA++R++R GQKR VI++RL+++G++EE +Y RQ++KQ L+N
Sbjct: 593 GANRVVLYDPDWNPSTDLQARERAWRIGQKRDVIIYRLVTSGTIEEKIYHRQIFKQLLTN 652
Query: 662 IAVSGKLEKRYF 673
+ + R+F
Sbjct: 653 KVLKDAQQTRFF 664
>gi|218187342|gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group]
gi|222617568|gb|EEE53700.1| hypothetical protein OsJ_00022 [Oryza sativa Japonica Group]
Length = 1355
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 310/592 (52%), Gaps = 111/592 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P ++ +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++FL ++
Sbjct: 530 LRIPGTLYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGSLH------ 583
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
+S + K + +++CP +++Q W E SRW F V I H
Sbjct: 584 NSGLYKPS--------IVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSSKKSKRSSD 635
Query: 231 --------------------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
D ++ ++ + G +L+T+++ RI G L ++ W
Sbjct: 636 SDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSSGSGLLLTTYEQLRILGEKLLDIEWGY 695
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 696 AVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPV 755
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
F + P+ G A + A L ++ YLLRR K + L K ++V
Sbjct: 756 FEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQLPK-KTEHV 814
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+FC+++ Q+ YR L E++ + + + ++L G D
Sbjct: 815 LFCSLTTEQRATYRAFLASSEVEQIFDGNR-----------------NSLYGIDV----- 852
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH +L+ E A PD GN +
Sbjct: 853 -------LRKICNHPDLL---------------EREHAAQNPDY----GNPER------- 879
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
GKM+ +E+++ W +G ++LLF+ + +MLDI+E FL Y + R+DG TP+
Sbjct: 880 ----SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQ 935
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
R +L+D+FN++ +F+++T+ GGLG NL ANR++I+DP+WNP+ D+QA++R++R GQ
Sbjct: 936 RMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQ 995
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+
Sbjct: 996 TRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKDPQQRRFFKA-RDMKDL 1046
>gi|401828407|ref|XP_003887917.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998925|gb|AFM98936.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 687
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 301/548 (54%), Gaps = 71/548 (12%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP + L E+Q++GV+++ KLYK + GG+L DDMGLGKT+Q I FL+ +F
Sbjct: 135 VPGFLWDTLFEYQKDGVEWMLKLYKEEKGGVLADDMGLGKTVQMIVFLSVLF-------- 186
Query: 189 TILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACG 245
+ GY VLI+CP++++ W +E+ R+ F V +Y G + E G
Sbjct: 187 ---------QSGYISRVLILCPATIVSQWILEWKRFYPF-VRVYFGFS--------ERSG 228
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
V + S++ ++ L W+I+I+DE H++KN +++ ++ +++ R++ L+GT
Sbjct: 229 EGVYLMSYERFKAREKGLV---WDILILDEGHKIKNRNAQITLSVKKVRARSKFVLSGTP 285
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+++FD+V PG LG+ F E ++E ++ G +A + A + L ++
Sbjct: 286 IQNNLGELWSIFDFVNPGLLGSHTSFHEEFEEVIRRGGYRSASNLQVERAYKHSLMLRSL 345
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
+ Y+LRRTK + I H + KED +VFCT++ +Q Y R+L+ + ++ G
Sbjct: 346 IEPYILRRTKSQ-ISHKLPSKEDKIVFCTLTPVQVELYNRVLESKHVMKVLTGKANLLSG 404
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
+ L+++ NH L P D P+ +
Sbjct: 405 ISM-----------------------------LRKVCNHPRLFFPGKVDGPEDCSSETCN 435
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRML 545
+I L G E GL V S K++ L L+ W +G K+L+FS ++RML
Sbjct: 436 EKNDGKAEISLEG-----EERYGL--VSSSCKIKILMDLLKKWKEEGSKVLVFSQTIRML 488
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANR 605
DI+E IRK Y++ R+DG T +++R SLVD FN +FL++T+ GGLGLNL+ A+R
Sbjct: 489 DIIE-MCIRK-YTYLRMDGRTATSVRSSLVDRFNRDEDVFIFLLTTKVGGLGLNLIGASR 546
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
+VI+DP+WNP+ D QA++R++R+GQ++ V ++R + ++EE VY +Q++K L +S
Sbjct: 547 IVIYDPDWNPSTDTQAKERAWRYGQRKDVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLS 606
Query: 666 GKLEKRYF 673
R+F
Sbjct: 607 NPRLNRFF 614
>gi|115433988|ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group]
gi|15128457|dbj|BAB62641.1| putative DNA repair and recombination protein [Oryza sativa
Japonica Group]
gi|20804446|dbj|BAB92143.1| putative DNA repair and recombination protein [Oryza sativa
Japonica Group]
gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B [Oryza sativa Japonica Group]
gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa Japonica Group]
Length = 1187
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 310/592 (52%), Gaps = 111/592 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P ++ +L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++FL ++
Sbjct: 362 LRIPGTLYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGSLH------ 415
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
+S + K + +++CP +++Q W E SRW F V I H
Sbjct: 416 NSGLYKPS--------IVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSSKKSKRSSD 467
Query: 231 --------------------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
D ++ ++ + G +L+T+++ RI G L ++ W
Sbjct: 468 SDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSSGSGLLLTTYEQLRILGEKLLDIEWGY 527
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 528 AVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPV 587
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
F + P+ G A + A L ++ YLLRR K + L K ++V
Sbjct: 588 FEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQLPK-KTEHV 646
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+FC+++ Q+ YR L E++ + + + ++L G D
Sbjct: 647 LFCSLTTEQRATYRAFLASSEVEQIFDGNR-----------------NSLYGIDV----- 684
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH +L+ E A PD GN +
Sbjct: 685 -------LRKICNHPDLL---------------EREHAAQNPDY----GNPER------- 711
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
GKM+ +E+++ W +G ++LLF+ + +MLDI+E FL Y + R+DG TP+
Sbjct: 712 ----SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQ 767
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
R +L+D+FN++ +F+++T+ GGLG NL ANR++I+DP+WNP+ D+QA++R++R GQ
Sbjct: 768 RMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQ 827
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+
Sbjct: 828 TRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKDPQQRRFFK-ARDMKDL 878
>gi|323347929|gb|EGA82189.1| Rad26p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1085
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGXYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPXKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|238492801|ref|XP_002377637.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
gi|220696131|gb|EED52473.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
Length = 1076
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 308/581 (53%), Gaps = 108/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 286 RIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 338
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ K V+I+CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 339 ----YSKKLTKP--VIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 392
Query: 245 ---------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDE 275
G++ VL+T++ + + +L V W ++DE
Sbjct: 393 DALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTYSGLQTYTPLLIPVEWGCAVLDE 452
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR +
Sbjct: 453 GHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQF 512
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A ++ A + + L + YLL+R K + L K + V+FC +
Sbjct: 513 EFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKVDVAADLPK-KSEQVLFCKL 571
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ LQ++AY+ L E+Q ++ R L G D
Sbjct: 572 TKLQRQAYKSFLGSEEMQSILRG-----------------RRQVLYGVDI---------- 604
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD Q A +G PD
Sbjct: 605 --LRKICNH-----------PDLQSHKLTSHKAGYGNPD--------------------K 631
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF+ MLDIL+KF+ G+++ R+DG+TP RQS
Sbjct: 632 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 691
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 692 MVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRD 751
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 752 VTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 792
>gi|15224228|ref|NP_179466.1| DNA excision repair protein E [Arabidopsis thaliana]
gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein
[Arabidopsis thaliana]
gi|330251711|gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana]
Length = 1187
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 205/701 (29%), Positives = 345/701 (49%), Gaps = 134/701 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ +P I +L ++QR GV++L++L+ + GGI+GD+MGLGKTIQ ++FL +
Sbjct: 375 LNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGS-------- 426
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
L +K+ K +IICP ++++ W E +W F+V I H +D
Sbjct: 427 ----LHFSKMYKPS--IIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKA 480
Query: 237 ---------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWE 269
+L ++ +LIT+++ R+ G L + W
Sbjct: 481 SESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWG 540
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
++DE HR++N S + + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 541 YAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLP 600
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
F + P+ G A + A L ++ YLLRR K + HL K ++
Sbjct: 601 VFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTK-KTEH 659
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
V+FC+++ Q+ YR L E++ + + + ++L G D
Sbjct: 660 VLFCSLTVEQRSTYRAFLASSEVEQIFDGNR-----------------NSLYGIDV---- 698
Query: 450 LVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+++I NH +L+ + + PD GN +
Sbjct: 699 --------MRKICNHPDLLEREHSHQNPDY--------------------GNPER----- 725
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
GKM+ + +++ W +G ++LLFS + +MLDILE FL+ YS+ R+DG TP
Sbjct: 726 ------SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPV 779
Query: 569 NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
R +L+D+FN+S VF+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R
Sbjct: 780 KQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRI 839
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF------ 682
GQK+ V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+
Sbjct: 840 GQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA-RDMKDLFILKDD 898
Query: 683 --QGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSN 740
N+F L++ + + + + Q H T +G SS+ ++
Sbjct: 899 GDSNASTETSNIFSQLAEEINIVGVQSDKKPESDTQLALHKTAEG---------SSEQTD 949
Query: 741 TLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVN 781
++ KT ++ D E K L + GI A +D I+N
Sbjct: 950 VEMT--DKTGEAMDEE-TNILKSLFDAHGIHSAVNHDAIMN 987
>gi|389743097|gb|EIM84282.1| hypothetical protein STEHIDRAFT_170019 [Stereum hirsutum FP-91666
SS1]
Length = 1200
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/509 (37%), Positives = 268/509 (52%), Gaps = 45/509 (8%)
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQ-RLTAPERFIRIADE 357
I LTGT +QN +EL+ L DW PG +G++ ++ EPL GQ + + PE ++
Sbjct: 595 IALTGTAIQNDYVELWTLLDWCNPGMVGSKAQWKMAIVEPLTRGQAKGSTPEERVKGQSV 654
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ +L ++ +RRTK+ I + K D VVFC ++ +Q Y+R+L LP +Q +I
Sbjct: 655 AIRLRDGLLPRFFIRRTKD-IISDQLPKKIDQVVFCPLTKMQTEVYKRILALPAVQNMIK 713
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KD PC CGS L + +CC D D + + L +ISNH+ LI P P D D
Sbjct: 714 KDEPCDCGSRLPRKKCCYPWDKKD---------LFTYMSTLIKISNHVALILPAPGDTAD 764
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG----- 532
+ ++ EL S VF G A E+ GL CGK + L L+ W +
Sbjct: 765 QVVRNKELTSLVFRQTEPPKYGTAMLEA--GL-----CGKWKVLHSLLVQWKRENAAMKN 817
Query: 533 ----DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL 588
K+L+F+ SV++L++LE L +G+ F LDGS R ++D F+ + VFL
Sbjct: 818 PKDWHKVLIFTKSVKLLNMLEFHLNSEGWGFLTLDGSVKQADRMPMIDKFHEDKNVFVFL 877
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
IST AGG GLNL A++VVIFDPNWNPA DLQA DR++RFGQ R V V+RLL GSLEEL
Sbjct: 878 ISTLAGGTGLNLTGADKVVIFDPNWNPAHDLQAMDRAYRFGQTRDVHVYRLLGCGSLEEL 937
Query: 649 VYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD---------- 698
+Y RQ+YKQQ I + + RYF GV K+ QGELFG+ N+F+ L D
Sbjct: 938 IYDRQIYKQQQMAIGYTASHQNRYFSGVSGDKQRQGELFGLKNIFK-LEDKEMKTKIAID 996
Query: 699 ----NLFTSEIIESHEEQGQQQERHHCTNQG-FKGLETHIVSSKDSNTLLSTGSKTRKSS 753
N F + + + +R +QG G+ +S + L G+
Sbjct: 997 QALLNNFDWALAHMEVAKSKTSKRRKSGSQGEIDGVYEVEMSQPKEDDLKGLGAFMLDDD 1056
Query: 754 -DPEMARTS-KPLLEDMGIVYAHRNDDIV 780
PE+ +L + GI Y H NDDI+
Sbjct: 1057 LAPEVQEDEITKILNNHGIKYTHHNDDIL 1085
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 28/202 (13%)
Query: 116 LVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
L+LS P I VP+ ++ +L +Q EGV+FL+K Y G ++GDDMGLGKT+Q IAF
Sbjct: 325 LILSPPALNPPIYVPSQLSTKLRAYQIEGVQFLFKNYSENRGVLIGDDMGLGKTLQVIAF 384
Query: 176 LAAVFGKDESS---------------DSTILKDNK----VDKK-GYVLIICPSSVIQNWE 215
L+A+ K S D K + D K LI+ PSSV+
Sbjct: 385 LSAIMQKTGSGALDKGRRKKYVSRLQDGVQWKRERKLPPADAKWATALIVAPSSVMD--- 441
Query: 216 IEFSRWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
W F V+ YHG R+ +L ++V++TSF++ R G +L + W +VIVDE
Sbjct: 442 -----WGHFEVAKYHGKEREQVLRDFTLGRLDVVVTSFETARKDGDLLDSLPWTVVIVDE 496
Query: 276 AHRLKNEKSKLYMACLELKTRN 297
AH++KN+++KL A K R+
Sbjct: 497 AHKIKNQQAKLTQALYAWKWRD 518
>gi|380029956|ref|XP_003698629.1| PREDICTED: DNA excision repair protein ERCC-6-like [Apis florea]
Length = 987
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 303/557 (54%), Gaps = 55/557 (9%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ +VP SI +L ++Q+ V++L++L+ GG+LGD+MGLGKT+Q IAFLA + +
Sbjct: 167 LFKVPQSIWKKLYKYQKISVQWLWELHLRSLGGLLGDEMGLGKTVQVIAFLAGLDCSELL 226
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILE 239
SD + G ++ICP+++++ W F W + S + N + +++
Sbjct: 227 SDG-----GRFRGLGPTIVICPATLMEQWVKHFHEWWPLLRIVVLHQSGTYNGNLEYLID 281
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L++ G+ +ITS+ H +L W VI+DE H+++N ++K+ A E T +R+
Sbjct: 282 SLKSGGI--IITSYSGMLKHKDLLVSNQWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRL 339
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A A +
Sbjct: 340 LLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEATALQVA 399
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + Y+LRRTK + H+ + K + V+FC++++ QK+ Y++ L ++ ++++
Sbjct: 400 MMLRDAITPYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLCSTDVSFILHE 459
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL-IKPNPRDEPD 477
G + +L L L++I NH +L + +P D +
Sbjct: 460 KNNIENGKYRAR--------------------LLIALSALRKICNHPDLYLYTSPIDSDE 499
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
DID+ NE+ K GKM + L+ W +G ++LL
Sbjct: 500 ---------------DIDI-----SNETLEKFGYWKRSGKMIVVRSLLKIWKKQGHRVLL 539
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
F+ +M+ +LE + + Y++ R+DG+TP + RQ + FN S +FL++TR GGLG
Sbjct: 540 FTQGRQMMHVLESLVQSEQYTYLRMDGTTPMSHRQETIRSFNRDSSYFIFLLTTRVGGLG 599
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL ANRVVI+DP+WNPA D QA++R++R GQ ++V ++RL++AG++EE +Y RQ++K
Sbjct: 600 VNLTGANRVVIYDPDWNPATDAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIFKI 659
Query: 658 QLSNIAVSGKLEKRYFE 674
LSN + ++R F+
Sbjct: 660 LLSNKVLEDPRQRRLFK 676
>gi|190409514|gb|EDV12779.1| DNA dependent ATPase [Saccharomyces cerevisiae RM11-1a]
Length = 1085
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|392298460|gb|EIW09557.1| Rad26p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1085
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|6322495|ref|NP_012569.1| Rad26p [Saccharomyces cerevisiae S288c]
gi|730465|sp|P40352.1|RAD26_YEAST RecName: Full=DNA repair and recombination protein RAD26; AltName:
Full=ATP-dependent helicase RAD26
gi|506419|gb|AAA34655.1| gtA1085 [Saccharomyces cerevisiae]
gi|1015683|emb|CAA89562.1| RAD26 [Saccharomyces cerevisiae]
gi|285812926|tpg|DAA08824.1| TPA: Rad26p [Saccharomyces cerevisiae S288c]
Length = 1085
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|151945105|gb|EDN63356.1| DNA dependent ATPase [Saccharomyces cerevisiae YJM789]
Length = 1085
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|391873750|gb|EIT82758.1| transcription-coupled repair protein CSB/RAD26 [Aspergillus oryzae
3.042]
Length = 1196
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 308/581 (53%), Gaps = 108/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 394 RIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 446
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ K V+I+CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 447 ----YSKKLTKP--VIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 500
Query: 245 ---------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDE 275
G++ VL+T++ + + +L V W ++DE
Sbjct: 501 DALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTYSGLQTYTPLLIPVEWGCAVLDE 560
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR +
Sbjct: 561 GHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQF 620
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A ++ A + + L + YLL+R K + L K + V+FC +
Sbjct: 621 EFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFCKL 679
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ LQ++AY+ L E+Q ++ R L G D
Sbjct: 680 TKLQRQAYKSFLGSEEMQSILRG-----------------RRQVLYGVDI---------- 712
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD Q A +G PD
Sbjct: 713 --LRKICNH-----------PDLQSHKLTSHKAGYGNPD--------------------K 739
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF+ MLDIL+KF+ G+++ R+DG+TP RQS
Sbjct: 740 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 799
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 800 MVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRD 859
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 860 VTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 900
>gi|317156769|ref|XP_001825991.2| DNA repair protein Rhp26/Rad26 [Aspergillus oryzae RIB40]
Length = 1192
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 308/581 (53%), Gaps = 108/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 390 RIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 442
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ K V+I+CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 443 ----YSKKLTKP--VIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 496
Query: 245 ---------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDE 275
G++ VL+T++ + + +L V W ++DE
Sbjct: 497 DALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTYSGLQTYTPLLIPVEWGCAVLDE 556
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR +
Sbjct: 557 GHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQF 616
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A ++ A + + L + YLL+R K + L K + V+FC +
Sbjct: 617 EFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFCKL 675
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ LQ++AY+ L E+Q ++ R L G D
Sbjct: 676 TKLQRQAYKSFLGSEEMQSILRG-----------------RRQVLYGVDI---------- 708
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD Q A +G PD
Sbjct: 709 --LRKICNH-----------PDLQSHKLTSHKAGYGNPD--------------------K 735
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF+ MLDIL+KF+ G+++ R+DG+TP RQS
Sbjct: 736 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 795
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 796 MVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRD 855
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 856 VTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 896
>gi|256270798|gb|EEU05949.1| Rad26p [Saccharomyces cerevisiae JAY291]
Length = 1085
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae]
Length = 1085
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|349579221|dbj|GAA24384.1| K7_Rad26p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1085
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
Length = 1156
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/567 (32%), Positives = 305/567 (53%), Gaps = 84/567 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
++VP +L ++Q+ GV++L +L++ GGIL D+MGLGKTIQ I FL A+ F + E+
Sbjct: 255 LRVPNVCWNKLFKYQKTGVRWLSELHEQCVGGILADEMGLGKTIQVICFLRALAFSQAET 314
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH------GPNRDMIL 238
+ G VL+ICP++++ W EF W +++ H GP ++
Sbjct: 315 ------RGFGFRGLGPVLLICPTTLMHQWLKEFHNWFPLCRIAVLHSSGCFRGPQSHLLS 368
Query: 239 E----KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ + + C L+TS+ ++ L+ NW VI+DE H+++N +++ A E++
Sbjct: 369 KFSTYRKDGC---TLLTSYSTFTKKRKALANANWHYVILDEGHKIRNPGAQMTRAVKEVR 425
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
T +R+ LTG+ +QN + EL++L D+V PG LG + F E + P+ G A +R
Sbjct: 426 TPHRLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFAIPITQGGYANASAIQVRT 485
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + L + Y+LRR K++ + + K + V+FC ++ Q+ Y+ +
Sbjct: 486 AYKCACVLRDAINPYILRRMKKDVEMTVQLPSKTEQVLFCNITPCQRTFYKDYI------ 539
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ EC + L G D+ L+ L+++ NH
Sbjct: 540 ---------------SSRECARILAG--GMDA------FVGLITLRKLCNH--------- 567
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD------VKSCGKMRALEKLMYS 527
PD+ G N NE + L + GKM L+ L+
Sbjct: 568 ------------------PDLVTGGPNKHNEYNVTLDEEMDFGAASRSGKMIVLKALLKL 609
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
W + K+LLFS S +ML +LEKF+I++GY + R+DGSTP RQ LV+ FN++ +F
Sbjct: 610 WKDQNQKVLLFSQSRQMLTLLEKFVIKEGYEYLRMDGSTPIGSRQPLVEKFNTNEDIFLF 669
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L++T+ GGLG+NL ANRVVIFDP+WNP+ D+QA++R++R GQ+R V V+RLL++G++EE
Sbjct: 670 LLTTKVGGLGVNLTGANRVVIFDPDWNPSTDVQARERAWRIGQERAVTVYRLLTSGTIEE 729
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+Y RQ++KQ L+N + ++R+F+
Sbjct: 730 KIYQRQIFKQFLANRVLVDPKQRRFFK 756
>gi|449296949|gb|EMC92968.1| hypothetical protein BAUCODRAFT_42604, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1182
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 197/648 (30%), Positives = 322/648 (49%), Gaps = 134/648 (20%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++VP I L ++Q+ GV++L++LY + GGI+GD+MGLGKTIQ I+FLA++ D+ +
Sbjct: 364 LRVPGDIYPSLFDYQKTGVQWLWELYSQQVGGIIGDEMGLGKTIQIISFLASLHYSDKLT 423
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC- 244
++++CP++V++ W EF RW VSI H M+ K EA
Sbjct: 424 KP-------------IIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDIKREARI 470
Query: 245 --------------------------------GVEVLITSFDSYRIHGSILSEVNWEIVI 272
VL+T++ + + +L +WE +
Sbjct: 471 EDDLEVDMYGRKKATMNKGHKAAKRIVDRVVRDGHVLVTTYSGLQTYAELLIPTDWEYAV 530
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 531 LDEGHKIRNPNTAITIYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 590
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P+K G A + A + + L + YLL+R K + L K + V+F
Sbjct: 591 SQFEIPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDVAADLPK-KSERVLF 649
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ LQ+ AY L E++ +++ G +
Sbjct: 650 CKLTKLQREAYEWFLASEEMKSILSGKRQALYGVDI------------------------ 685
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH +L++ + ++ A +G S
Sbjct: 686 -----LRKICNHPDLVE---------HKTLSKKAGYNYG------------------SGH 713
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI-RKGYSFSRLDGSTPSNLR 571
KS GKM+ ++ L+ W G K LLF+ MLDILE F+ G+++ R+DG+T R
Sbjct: 714 KS-GKMQVVKALLEIWKRDGHKTLLFAQHRIMLDILETFIQGMDGFNYRRMDGNTSIKDR 772
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q LVD+FN VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 773 QDLVDEFNKDQDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 832
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN 691
R V ++RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 833 REVEIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPRQRQTFQ----------------- 875
Query: 692 LFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDS 739
RDL D LFT G+ ++ T FKG E + +K +
Sbjct: 876 -LRDLHD-LFTL---------GESRDGETETGSIFKGTEVQLSGAKKT 912
>gi|134118954|ref|XP_771980.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254584|gb|EAL17333.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1060
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 208/604 (34%), Positives = 318/604 (52%), Gaps = 67/604 (11%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
+P VL D E I++P SIN L E+QR G KFLY YK G +LGDDMGLGKT+Q I
Sbjct: 276 KPFVL--DQETKDIKIPPSINRFLKEYQRAGAKFLYDAYKQGRGAVLGDDMGLGKTVQVI 333
Query: 174 AFLAAVFGK-----DESSDSTILKDNKVDKK----GYVLIICPSSVIQNWEIEFSRWSTF 224
+FL+A+ K D ++++ VD LIICP S+I N W F
Sbjct: 334 SFLSAIMRKTGTYVDHQRRKRTIRESVVDVSPRHWPTALIICPKSLINN-------WGYF 386
Query: 225 NVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKS 284
+++ N + +K ++++ S+D R+ + ++ VI DEAHRLK S
Sbjct: 387 EYAVWKSDNWRDVQQKFIHGYLDLI--SYDVARLDIQHIKDLPLSTVIADEAHRLKEPMS 444
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
+ +A ++ + LTGT++QN+I E++++ D+V G GT ++EF P+K G +
Sbjct: 445 QTTLALKSIQCQMCFALTGTLVQNRIDEMWSVLDFVHRGWAGTYRQWKEFAVSPIKKGHQ 504
Query: 345 L--TAPE--RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
+ TA E R I Q +L + LRR K + I H + K+D VVFC ++ Q
Sbjct: 505 VEGTAAEVVRAIMTIGVMTQR---ILPHFYLRRDK-KLIAHELPEKKDLVVFCPLASRQI 560
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
AYR L++ ++ + ++ PC CGS + ++ ++ L L++
Sbjct: 561 VAYRALIESDDVVNIQARNRPCPCGSGKSNMK----------------EILFQYLSALRK 604
Query: 461 ISNHLELIKPNPRDEPDKQRK-DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
++NH L+ +D+ R + +L G + E+ D ++CGK
Sbjct: 605 VANHFGLLYDLDKDDNKHTRMINRKLFKICTGREPTSRSDYTLEEAL----DPENCGKWD 660
Query: 520 ALEKLMYSWASK--GDKILLFSYSVRMLDILEKFLIR----KGYSFSRLDGSTPSNLRQS 573
L+KL+ W ++ +K+L+FS SVR+L I+ +F+ G+ F L G RQ
Sbjct: 661 LLKKLLVQWRNEPVKNKVLIFSTSVRLLKIISRFISTSPSLSGFEFDALTGEASGTERQE 720
Query: 574 LVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
++D F + LISTRAGG+GLNL +AN+VVIFDP+W DR+FR GQKR
Sbjct: 721 MIDRFQDLERDHFIMLISTRAGGVGLNLTAANKVVIFDPSWT-------MDRAFRIGQKR 773
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG---VQDCKEFQGELFGI 689
V V+RL+ G++EEL+Y RQV KQQ + +G LE R ++G + K+ Q ELFG+
Sbjct: 774 TVEVYRLIGQGTIEELIYERQVQKQQSARQLNNGTLEPRIYQGYDRATNAKD-QAELFGV 832
Query: 690 CNLF 693
NLF
Sbjct: 833 HNLF 836
>gi|207343880|gb|EDZ71203.1| YJR035Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1046
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 306/603 (50%), Gaps = 131/603 (21%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 248 FKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------ 301
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 302 HSGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMD 354
Query: 222 -------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYR 257
S F+ + R D +++K+ G +LIT++ R
Sbjct: 355 ENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLR 413
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
IH L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LF
Sbjct: 414 IHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLF 473
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
D++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 474 DFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKAD 533
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 534 VAKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN 576
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDL 496
VL + L++I NH +L+ + R PD +G
Sbjct: 577 -------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG----- 606
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG 556
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 607 --------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKD 652
Query: 557 YSFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDP 611
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP
Sbjct: 653 PDLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDP 711
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKR 671
+WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR
Sbjct: 712 DWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKR 771
Query: 672 YFE 674
+F+
Sbjct: 772 FFK 774
>gi|83774735|dbj|BAE64858.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 977
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 308/581 (53%), Gaps = 108/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 281 RIPGDIYPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 333
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ K V+I+CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 334 ----YSKKLTKP--VIIVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 387
Query: 245 ---------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDE 275
G++ VL+T++ + + +L V W ++DE
Sbjct: 388 DALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTYSGLQTYTPLLIPVEWGCAVLDE 447
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR +
Sbjct: 448 GHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQF 507
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P++ G A ++ A + + L + YLL+R K + L K + V+FC +
Sbjct: 508 EFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLFCKL 566
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ LQ++AY+ L E+Q ++ R L G D
Sbjct: 567 TKLQRQAYKSFLGSEEMQSILRG-----------------RRQVLYGVDI---------- 599
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD Q A +G PD
Sbjct: 600 --LRKICNH-----------PDLQSHKLTSHKAGYGNPD--------------------K 626
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W G K LLF+ MLDIL+KF+ G+++ R+DG+TP RQS
Sbjct: 627 SGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQS 686
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD+FN++P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQKR
Sbjct: 687 MVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRD 746
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 747 VTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTFQ 787
>gi|391327035|ref|XP_003738014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 1213
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 302/556 (54%), Gaps = 64/556 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P S+ +L ++Q+ VK+L++L++ K GGI+GD+MGLGKTIQ IAFL +
Sbjct: 352 FRMPTSLWNKLYKYQQTCVKWLWELHQFKCGGIIGDEMGLGKTIQAIAFLRGL-----RH 406
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------STFNVSIYHGPNRDMILE 239
+T L G ++++ P++V+ W EF +W N Y G + +++
Sbjct: 407 SNTKLPGEAFRGLGPIILVTPATVMHQWVKEFHKWFPRQRVGVLHNSGSYSGRKKSTLID 466
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ + LITS+ ++ L +W +I+DE H+++N ++ +A + +T +R+
Sbjct: 467 EIHSSK-GTLITSYQGIVMYQDDLIHHHWHYIILDEGHKIRNPDAQATLAVKQFRTPHRL 525
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+G+ +QN + EL++LFD+V PG LGT F + P+ HG A E + +
Sbjct: 526 ILSGSPIQNNLRELWSLFDFVFPGKLGTLPVFMAEFAVPITHGGYANATETQVAVGYRCA 585
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMG-KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ YLLRR K + + + K + V+FC +++ Q+ YR ++ E++ +++
Sbjct: 586 TILRDTIKPYLLRRMKSDVKTSINLPPKSEQVIFCKLTERQRDLYREYVESHEVKKILDG 645
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ G LV L++I NH +L
Sbjct: 646 RMQIFVG-----------------------------LVNLRKICNHPDLYDG-------- 668
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
GPD D++ + + S K GK+ +E L+ W+ + ++LLF
Sbjct: 669 ------------GPDKDIITSSRKVPSS-SFGFYKRSGKLMVVEALLKLWSKQKQRVLLF 715
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ S +ML ILE+F+ + Y++ +DGST + RQ +D FN S +FL++TR GGLG+
Sbjct: 716 TQSRQMLRILEEFVQNRHYTYLSMDGSTAISTRQPAIDRFNQDSSIFIFLLTTRVGGLGV 775
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRV+I+DP+WNP+ D+QA++R++R GQ++ V V+RL++AG++EE +Y RQ++KQ
Sbjct: 776 NLTGANRVIIYDPDWNPSTDMQARERAWRIGQQKDVTVYRLMTAGTIEEKIYHRQIFKQF 835
Query: 659 LSNIAVSGKLEKRYFE 674
L+N + ++R+F+
Sbjct: 836 LTNRVLKNPKQRRFFK 851
>gi|365764698|gb|EHN06219.1| Rad26p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1085
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGCYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88]
Length = 1214
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 310/583 (53%), Gaps = 109/583 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I+ L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 408 RIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 460
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ + V+++CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 461 ----YSKKLTRP--VIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 514
Query: 245 ------------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVI 272
G++ VL+T++ + + S++ + W +
Sbjct: 515 DALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIEWGCAV 574
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 575 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 634
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P++ G A ++ A + + L + YLL+R K + L K + V+F
Sbjct: 635 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLF 693
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ Q++AY L E++ ++N R L G D
Sbjct: 694 CKLTKPQRQAYEAFLGSEEMKSILNG-----------------RRQVLFGVDI------- 729
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH PD Q + +L S S G
Sbjct: 730 -----LRKICNH-----------PDLQ--NHKLMS-----------------STTGYGSG 754
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+S+ R+DG+TP R
Sbjct: 755 SKSGKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHR 814
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q++VD+FN+ PS VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 815 QAMVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 874
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 875 RDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 917
>gi|398408155|ref|XP_003855543.1| SNF2 family DNA repair and recombination protein, partial
[Zymoseptoria tritici IPO323]
gi|339475427|gb|EGP90519.1| SNF2 family DNA repair and recombination protein [Zymoseptoria
tritici IPO323]
Length = 1207
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 297/570 (52%), Gaps = 107/570 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ GV++L++L+ + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 389 FRIPGDIYPSLFDYQKTGVQWLWELFSQQVGGIIGDEMGLGKTIQIISFLAGLH------ 442
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
NK+ K ++++CP++V++ W EF RW VSI H M
Sbjct: 443 -----YSNKLTKP--IIVVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDLRRETSF 495
Query: 237 ------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVI 272
IL ++ G VL+T++ + + +L +WE +
Sbjct: 496 EDELEEDSFQRKRTHSKGYNSAKRILNRVVRDG-HVLVTTYSGLQTYAELLIPTDWEYAV 554
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD+V P LGT +F+
Sbjct: 555 LDEGHKIRNPNTSITIFCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFK 614
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P+K G A + A + + L + YLL+R K + L K + V+F
Sbjct: 615 SQFEVPIKQGGYANASNLQVETAMKCAETLKDTISPYLLQRFKVDVAADLPK-KSERVLF 673
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ LQ+ AY L+ ++ ++N + L G D
Sbjct: 674 CKLTKLQRDAYEWFLRSDDMSSIMNG-----------------KRQALYGIDI------- 709
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH +L++ + ++ S +G
Sbjct: 710 -----LRKICNHPDLVE---------HKTLSKKTSYAYGTG------------------- 736
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI-RKGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILE F+ KG+++ R+DG+T R
Sbjct: 737 SKSGKMQVVKALLEIWKRNGHKTLLFAQHRIMLDILESFIQGMKGFNYRRMDGNTSIKDR 796
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q LVD+FN + VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 797 QDLVDEFNKDQNLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 856
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
R V ++RL++AG++EE +Y RQ++KQ L+N
Sbjct: 857 REVEIYRLMTAGTIEEKIYHRQIFKQFLTN 886
>gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger]
Length = 1223
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 310/583 (53%), Gaps = 109/583 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I+ L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 417 RIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 469
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ + V+++CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 470 ----YSKKLTRP--VIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 523
Query: 245 ------------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVI 272
G++ VL+T++ + + S++ + W +
Sbjct: 524 DALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIEWGCAV 583
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 584 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 643
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P++ G A ++ A + + L + YLL+R K + L K + V+F
Sbjct: 644 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLF 702
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ Q++AY L E++ ++N R L G D
Sbjct: 703 CKLTKPQRQAYEAFLGSEEMKSILNG-----------------RRQVLFGVDI------- 738
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH PD Q + +L S S G
Sbjct: 739 -----LRKICNH-----------PDLQ--NHKLMS-----------------STTGYGSG 763
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+S+ R+DG+TP R
Sbjct: 764 SKSGKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHR 823
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q++VD+FN+ PS VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 824 QAMVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 883
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 884 RDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 926
>gi|255577952|ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis]
gi|223530676|gb|EEF32549.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis]
Length = 1230
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 318/619 (51%), Gaps = 120/619 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P +I +L E+Q+ GV++L++L+ + GGI+GD+MGLGKTIQ ++FL A+ +
Sbjct: 390 LKIPEAIFSKLFEYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYK 449
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
S ++ICP ++++ W+ E +W F+V + H +D+
Sbjct: 450 PS--------------IVICPVTLLRQWKREAEKWYPRFHVELLHDSAQDLPHGKRAKSF 495
Query: 237 ----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNW 268
++ ++ +LIT+++ R+ G L ++ W
Sbjct: 496 DSDNESEGSLDSDYEGNISSKKANKWDSLINRVLKSEAGLLITTYEQLRLLGEKLLDIEW 555
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 556 GYAVLDEGHRIRNPNAEVTLICKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVL 615
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F + P+ G A + A L ++ YLLRR K + L K +
Sbjct: 616 PVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVNAQLPK-KTE 674
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
+V+FC+++ Q+ YR L E++ +I+ GS ++L G D
Sbjct: 675 HVLFCSLTAEQRSVYRAFLASTEVEQIID-------GS----------RNSLYGIDV--- 714
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+++I NH +L+ E + PD GN
Sbjct: 715 ---------MRKICNHPDLL---------------EREHSCQNPDY----GNPDR----- 741
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
GKMR + +++ W +G ++LLF+ + +MLDILE FL GYS+ R+DG TP
Sbjct: 742 ------SGKMRVVAQVLKVWREQGHRVLLFAQTQQMLDILEIFLNSGGYSYRRMDGLTPI 795
Query: 569 NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
R +L+D+FN+S +F+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R
Sbjct: 796 KQRMALIDEFNNSNDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRI 855
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF------ 682
GQKR V V+RL++ G++EE VY RQ+YK L+N + ++R+F+ +D K+
Sbjct: 856 GQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA-RDMKDLFTLNDD 914
Query: 683 -QGELFGICNLFRDLSDNL 700
L N+F LS+ +
Sbjct: 915 GGSGLTETSNIFSQLSEEV 933
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 300/560 (53%), Gaps = 88/560 (15%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP+ + RL ++Q+ VK+L++L+ + GGILGD+MGLGKT+Q IA+LA +
Sbjct: 444 RVPSRLYGRLFDYQQTAVKWLWELHTQRAGGILGDEMGLGKTVQVIAYLAGLH------H 497
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHG-------------PN 233
S + + + LI+CP++V++ W E S W F V + H P+
Sbjct: 498 SGLYRPS--------LIVCPATVLRQWMRELRSWWPPFRVVLLHESGRSPPAAATAVRPD 549
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
R +LE + +++T++D+ R+ +L V W + ++DE H+++N S++ + C +L
Sbjct: 550 RPALLEVALSSPSGLVLTTYDNLRLQRDLLLRVRWGVAVLDEGHKIRNPDSEITLVCKQL 609
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
T +R+ ++G+ +QN++ EL++LFD++ PG LGT F+ + P++ G A +
Sbjct: 610 HTVHRLIMSGSPIQNRLSELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGYSNASSLQVT 669
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + L + YLLRR K + L K + V+FCT+ Q YR L E+
Sbjct: 670 TAYKCAVVLRDLTAPYLLRRRKADVAAQL-PAKMEQVLFCTLVSEQLELYRAYLASTEVG 728
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
++ CG + L++I NH +L++
Sbjct: 729 EILEGSRRALCGIDI-----------------------------LRKICNHPDLLE---- 755
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
V D + G A++ GK+R E+++ SW +
Sbjct: 756 --------------RVTAQDAEDYGNPARS------------GKLRVAERVLTSWHTARQ 789
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRA 593
K LLF + +MLDILEK + +G+S+ R+DG TP +R L+DDFN++P VFL++T+
Sbjct: 790 KALLFCQTQQMLDILEKLVAGRGWSYHRMDGGTPVAVRPRLIDDFNTNPDVFVFLLTTKV 849
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLG+NL A RV+++DP+WNP+ D+QA++R++R GQ V ++RL++AG++EE +Y RQ
Sbjct: 850 GGLGVNLTGATRVMLYDPDWNPSTDIQARERAWRIGQSHSVTIYRLITAGTIEEKIYHRQ 909
Query: 654 VYKQQLSNIAVSGKLEKRYF 673
+YK L+N + +KR+F
Sbjct: 910 IYKSFLTNKVLRDPRQKRFF 929
>gi|259147500|emb|CAY80752.1| Rad26p [Saccharomyces cerevisiae EC1118]
Length = 1085
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFHHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGCYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPPKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
Length = 1113
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 302/558 (54%), Gaps = 66/558 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+++P +L ++Q+ GV++L +L+ GGIL D+MGLGKT+Q I+FL A+ F + E
Sbjct: 240 MKIPNDCWKKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRALAFSRLED 299
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSI------YHGPNRDMIL 238
+ G VLIICP+++I W EF W V+I +HG N +I
Sbjct: 300 RGFSFFG------LGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIR 353
Query: 239 EKLEA-CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + A VL+TS+ ++ + L + W VI+DE H+++N ++++ +A E++T +
Sbjct: 354 KMVVARSDGNVLLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPH 413
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ L+G+ +QN + EL++L D+V PG LG F + + P+ G A +R A +
Sbjct: 414 RLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYK 473
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L + YLLRR K++ + + K + V+FC ++ Q+ Y L E ++
Sbjct: 474 CACILRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRIL 533
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+ G L+ L+++ NH +LI P
Sbjct: 534 SGKTDAFVG-----------------------------LITLRKLCNHPDLITGGPNKFN 564
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D A+NE G + +S GKM+ L+ L+ W + K+L
Sbjct: 565 D-------------------YSVTAENEMDFG-APCRS-GKMQVLKALLKLWKQQDQKVL 603
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LFS S +ML ILEKF+I++GY + R+DG+TP RQ LV+ FN +FL++TR GGL
Sbjct: 604 LFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRSRQLLVEKFNKVDEIFIFLLTTRVGGL 663
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL ANRVVIFDP+WNP+ D+QA++R++R GQ+R V ++RLL+ G++EE +Y RQ++K
Sbjct: 664 GINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFK 723
Query: 657 QQLSNIAVSGKLEKRYFE 674
LSN + ++R+F+
Sbjct: 724 VFLSNRILVDPRQRRFFK 741
>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
Length = 1112
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 302/558 (54%), Gaps = 66/558 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDES 185
+++P +L ++Q+ GV++L +L+ GGIL D+MGLGKT+Q I+FL A+ F + E
Sbjct: 240 MKIPNDCWKKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRALAFSRLED 299
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSI------YHGPNRDMIL 238
+ G VLIICP+++I W EF W V+I +HG N +I
Sbjct: 300 RGFSFFG------LGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIR 353
Query: 239 EKLEA-CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + A VL+TS+ ++ + L + W VI+DE H+++N ++++ +A E++T +
Sbjct: 354 KMVVARSDGNVLLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPH 413
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ L+G+ +QN + EL++L D+V PG LG F + + P+ G A +R A +
Sbjct: 414 RLILSGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYK 473
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L + YLLRR K++ + + K + V+FC ++ Q+ Y L E ++
Sbjct: 474 CACILRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRIL 533
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+ G L+ L+++ NH +LI P
Sbjct: 534 SGKTDAFVG-----------------------------LITLRKLCNHPDLITGGPNKFN 564
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D A+NE G + +S GKM+ L+ L+ W + K+L
Sbjct: 565 D-------------------YSVTAENEMDFG-APCRS-GKMQVLKALLKLWKQQDQKVL 603
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGL 596
LFS S +ML ILEKF+I++GY + R+DG+TP RQ LV+ FN +FL++TR GGL
Sbjct: 604 LFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRSRQLLVEKFNKVDEIFIFLLTTRVGGL 663
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL ANRVVIFDP+WNP+ D+QA++R++R GQ+R V ++RLL+ G++EE +Y RQ++K
Sbjct: 664 GINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFK 723
Query: 657 QQLSNIAVSGKLEKRYFE 674
LSN + ++R+F+
Sbjct: 724 VFLSNRILVDPRQRRFFK 741
>gi|21432058|gb|AAH32964.1| 0610007P08Rik protein [Mus musculus]
Length = 394
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 243/397 (61%), Gaps = 7/397 (1%)
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLL 371
EL+ + DW PG LG+R HF++ + +P++HGQR TA +R + + L + + L
Sbjct: 3 ELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFL 62
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RRTK G L KED +V+C+++D QK Y+ +L+ ++ ++ PC+CGS +
Sbjct: 63 RRTKTLIKGQLP-KKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRR 121
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
+CC + N G CL L LQ+I+NH+ L++ + ++ + VF
Sbjct: 122 KCCYK-TNSRGDTVRTLCLSY--LTVLQKIANHVALLQAASTSK-HQETVIKRICDRVFS 177
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D V +++ +F LSD K GKM+ L++L+ + + DK+LLFS+S ++LD+L+++
Sbjct: 178 RFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQY 236
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDP 611
+ G + RLDGST S R +V +FNSS + L+ST AGGLGLN V AN V++FDP
Sbjct: 237 CMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDP 296
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKR 671
WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQVYKQQL + V + KR
Sbjct: 297 TWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKR 356
Query: 672 YFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
YFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 357 YFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 393
>gi|408391786|gb|EKJ71154.1| hypothetical protein FPSE_08660 [Fusarium pseudograminearum CS3096]
Length = 1163
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 297/562 (52%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA+
Sbjct: 388 LKLPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALH------ 441
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
K+ + V+++ P+++++ W EF RW VSI H M+ K E
Sbjct: 442 -----YSKKLRRP--VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEY 494
Query: 243 -----------------------ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
A VL+T++ + + L V W+ ++DE H++
Sbjct: 495 DLDHYKPLATKSQNAASRIVNGVAKSGHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKI 554
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 555 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPI 614
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC +++ Q
Sbjct: 615 RQGGYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDVAADLPE-KTEQVLFCKLTEGQ 673
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+AY ++ E+ ++N+ R +L G D L+
Sbjct: 674 HKAYETFIKSDEVSAILNR-----------------RRQSLYGIDI------------LR 704
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ D L G D GN + + + L+
Sbjct: 705 KICNHPDLL-------------DKSLGKKA-GYDF----GNPKLSAKLQLT-------KD 739
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K LLFS +MLDI+EK + G S+ R+DG TP + RQ+++D FN
Sbjct: 740 LLQKVMIP---NGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDRRQTMIDKFN 796
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
SP VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQK+ V ++RL
Sbjct: 797 ESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRL 856
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 857 MTEGTIEEKIYHRQIFKQFMTN 878
>gi|350639251|gb|EHA27605.1| hypothetical protein ASPNIDRAFT_184433 [Aspergillus niger ATCC
1015]
Length = 1179
Score = 301 bits (772), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 310/583 (53%), Gaps = 109/583 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I+ L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 396 RIPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQVISFLAGLH------- 448
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-- 244
K+ + V+++CP++V++ W EF RW F VSI H M+ + E+
Sbjct: 449 ----YSKKLTRP--VIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRNESSRE 502
Query: 245 ------------------GVE--------------VLITSFDSYRIHGSILSEVNWEIVI 272
G++ VL+T++ + + S++ + W +
Sbjct: 503 DALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLVTTYSGLQTYASLVIPIEWGCAV 562
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N + + + C EL+T +RI L+GT MQN + EL++LFD+V P LGT +FR
Sbjct: 563 LDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFR 622
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P++ G A ++ A + + L + YLL+R K + L K + V+F
Sbjct: 623 NQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPK-KSEQVLF 681
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C ++ Q++AY L E++ ++N R L G D
Sbjct: 682 CKLTKPQRQAYEAFLGSEEMKSILNG-----------------RRQVLFGVDI------- 717
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH PD Q + +L S S G
Sbjct: 718 -----LRKICNH-----------PDLQ--NHKLMS-----------------STTGYGSG 742
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLR 571
GKM+ ++ L+ W G K LLF+ MLDILEKF+ G+++ R+DG+TP R
Sbjct: 743 SKSGKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLSGFNYRRMDGTTPIQHR 802
Query: 572 QSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
Q++VD+FN+ PS VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R++R GQK
Sbjct: 803 QAMVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQK 862
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R V V+RL++AG++EE +Y RQ++KQ L+N + +++ F+
Sbjct: 863 RDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTFQ 905
>gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis]
Length = 1033
Score = 301 bits (772), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 199/598 (33%), Positives = 303/598 (50%), Gaps = 123/598 (20%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP I L +Q+ V++L +LY+ GGI+GD+MGLGKTIQ IAFLA
Sbjct: 257 VPGDIFPLLFPYQKTCVQWLCELYQQGCGGIIGDEMGLGKTIQIIAFLA----------- 305
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM----------- 236
T+ K++ G VL++CP++V++ W EF + W F I H M
Sbjct: 306 TLHHSRKLN--GPVLVVCPATVMKQWCNEFHTWWPPFRAVILHSIGAGMNKGTQIPEEEL 363
Query: 237 -----------------------------------ILEKLEACGVEVLITSFDSYRIHGS 261
+LEK+ G ++IT++ R+H
Sbjct: 364 EKMLMTSNYGTFTYNDYEKKEKTRTSLESRKSVKKLLEKVITDG-HIIITTYVGLRLHSE 422
Query: 262 ILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVA 321
L V W I+DE H+++N S + + C +LKT+NRI L+GT +QN + EL++LFD+V
Sbjct: 423 ALLNVRWGYAILDEGHKIRNPDSDISLTCKQLKTQNRIILSGTPIQNNLTELWSLFDFVY 482
Query: 322 PGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH 381
PG LGT F++ + P+ G A ++ + L ++ YLLRR K + +
Sbjct: 483 PGKLGTLPVFQQQFANPINMGGYANASNIQVKTGYKCAVALRDLISPYLLRRVKSD-VAK 541
Query: 382 LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
+ K + V+FC ++ QK Y L E L ++ KR
Sbjct: 542 DLPKKNEMVLFCKLTQYQKSKYLEFLHSDE----------------LMKIRKGKRQ---- 581
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
VL + L++I NH +L+ K++K + A +G
Sbjct: 582 ---------VLYGIDILRKICNHPDLLDL-------KRKKMNDYEDADYG---------- 615
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG----- 556
+ GKM+ +++L+ W S+G K LLF+ S +MLDIL++F+ K
Sbjct: 616 ---------NPARSGKMQVVKQLLLLWHSQGHKTLLFTQSRQMLDILQEFISYKDPELSD 666
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
F R+DG+T RQSLVD FN+ P VFL++TR GGLG+NL ANR++IFDP+WNP+
Sbjct: 667 LKFLRMDGTTNIGSRQSLVDKFNNEPY-DVFLLTTRVGGLGINLTGANRIIIFDPDWNPS 725
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
D+QA++R++R GQKR V ++RL+ AGS+EE +Y RQ++KQ LSN + +KR+F+
Sbjct: 726 TDMQARERAWRIGQKREVTIYRLMIAGSIEEKIYHRQIFKQFLSNKILKDPKQKRFFK 783
>gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1]
Length = 1163
Score = 301 bits (772), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 297/562 (52%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA+
Sbjct: 388 LKLPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALH------ 441
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
K+ + V+++ P+++++ W EF RW VSI H M+ K E
Sbjct: 442 -----YSKKLRRP--VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEY 494
Query: 243 -----------------------ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
A VL+T++ + + L V W+ ++DE H++
Sbjct: 495 DLDHYKPLATKSQKAASRIVNGVAKSGHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKI 554
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 555 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPI 614
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC +++ Q
Sbjct: 615 RQGGYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDVAADLPE-KTEQVLFCKLTEGQ 673
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+AY ++ E+ ++N+ R +L G D L+
Sbjct: 674 HKAYETFIKSDEVSAILNR-----------------RRQSLYGIDI------------LR 704
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ D L G D GN + + + L+
Sbjct: 705 KICNHPDLL-------------DKSLGKKA-GYDF----GNPKLSAKLQLT-------KD 739
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K LLFS +MLDI+EK + G S+ R+DG TP + RQ+++D FN
Sbjct: 740 LLQKVMIP---NGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDRRQTMIDKFN 796
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
SP VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQK+ V ++RL
Sbjct: 797 ESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRL 856
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 857 MTEGTIEEKIYHRQIFKQFMTN 878
>gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
Length = 1046
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/609 (30%), Positives = 315/609 (51%), Gaps = 115/609 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I RL ++Q+ GVK+L++L+ K GGI+GD+MGLGKT+Q IAFLAA+ S
Sbjct: 289 LRIPLDIYDRLFDYQKTGVKWLWELHSLKTGGIIGDEMGLGKTVQVIAFLAALHHSRMYS 348
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
S +++CP ++ W+ E +W F+V + H
Sbjct: 349 PS--------------IVVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKEAEDS 394
Query: 231 -------GPNR--------DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
G R D ++EK +++T+++ R+ L +++W ++DE
Sbjct: 395 DASGDDSGDARRDARLARWDGVVEKTVRSPSGLIVTTYEQLRLLKDTLLDIDWGYAVLDE 454
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
HR++N ++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG F+ +
Sbjct: 455 GHRIRNPDAETTLICKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFQAQF 514
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
P+ G A + A + L ++ Y+LRR K + L K ++V+FC++
Sbjct: 515 ALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYILRRMKSDVEAKLTK-KTEHVLFCSL 573
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
++ Q+ YR L +++ + +G + + + +
Sbjct: 574 TETQRACYRAFLASSDVERI------------------------FEGSKNALYGIDI--- 606
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD ++A A +G PD
Sbjct: 607 --LRKICNH-----------PDLLEREASEKHADYGLPD--------------------R 633
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
GK+ + +++ SW +G ++L+F + +MLDI+E F+ +GY++ R+DGST R +L
Sbjct: 634 SGKLMVVSQVLNSWKDQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPAL 693
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+D+FN S VFL++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQ + V
Sbjct: 694 IDEFNESSHVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDV 753
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF-------QGELF 687
IV+RL++ G++EE VY RQ+YKQ L+N + ++R F+ +D ++ +G+
Sbjct: 754 IVYRLITRGTIEEKVYHRQIYKQFLTNKILRDPQQRRVFKS-KDMRDLFVLHEDAEGDKT 812
Query: 688 GICNLFRDL 696
NLF +L
Sbjct: 813 ETSNLFPEL 821
>gi|115387749|ref|XP_001211380.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
gi|114195464|gb|EAU37164.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
Length = 1192
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 306/596 (51%), Gaps = 107/596 (17%)
Query: 113 FEPLVLSKDGEYPI-IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
F P D EY ++P I+ L ++Q+ GV++L++L + + GGI+GD+MGLGKTIQ
Sbjct: 368 FMPHPTVPDVEYDNGYRLPGDIHPLLFDYQKTGVQWLWELQQQQVGGIIGDEMGLGKTIQ 427
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH 230
IAFLA + K+ K +++CP++V++ W EF + W F VSI H
Sbjct: 428 VIAFLAGLH-----------YSKKLTKP--AIVVCPATVMKQWVTEFHTWWPAFRVSILH 474
Query: 231 GPNRDMILEKLEACGVE-------------------------------VLITSFDSYRIH 259
M+ + E+ E VL+T++ +
Sbjct: 475 TSGSGMVNIRNESRREEALLSQTWDSRASSSGLKAGRRVVKRVVEEGHVLVTTYSGLLSY 534
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
S+L V W I+DE H+++N + + + EL+T +RI L+GT MQN + EL++LFD+
Sbjct: 535 ASLLIPVEWGCAILDEGHKIRNPNTAITIHAKELRTPHRIILSGTPMQNNLTELWSLFDF 594
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI 379
V P LGT +FR ++ P++ G A ++ A + + L + YLL+R K +
Sbjct: 595 VFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVA 654
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L K + V+FC ++ LQ+++Y+ L E+Q ++ R
Sbjct: 655 ADLPK-KSEQVLFCRLTKLQRQSYKAFLASQEMQSILRG-----------------RRQA 696
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
L G D L++I NH PD Q A +G
Sbjct: 697 LYGIDI------------LRKICNH-----------PDLQSHKFSAHKAAYG-------- 725
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYS 558
+ GKM+ + L+ W G K LLF+ MLDILEKF+ G +
Sbjct: 726 -----------GAEKSGKMQVVRSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGIN 774
Query: 559 FSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQD 618
+ R+DG+TP RQS+VD+FN PS +FL++T+ GGLG+NL A+RV+I+DP+WNP+ D
Sbjct: 775 YRRMDGTTPIAQRQSMVDEFNKDPSLHLFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTD 834
Query: 619 LQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+QA++R++R GQKR V ++RL++AG++EE +Y RQV+KQ L+N + +++ F+
Sbjct: 835 MQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQVFKQFLTNKILRDPKQRQTFQ 890
>gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818]
Length = 1641
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 297/557 (53%), Gaps = 67/557 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAA-VFGKDES 185
I VP + +L +Q E V++L L + GG+LGD+MGLGKTIQ IAFLA ++G +
Sbjct: 671 IYVPGFLWSKLYPYQHECVRWLASLQTSGVGGVLGDEMGLGKTIQVIAFLAGLMYGTPTT 730
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN----RDMILEK 240
S + + + G +L++CP++V+ +W EF RW + F V + H R+ ++ +
Sbjct: 731 S---VRRHVRRSSNGAILVVCPATVVHHWVREFHRWWAPFRVCVLHSSGNYEGRESLVRR 787
Query: 241 LEACGV-EVLITSFDSYRI-HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ G VLIT++ + R H IL W ++DE H+++N +++ + +LKT +R
Sbjct: 788 IARGGAGHVLITTYSTLRTAHTDILVRHRWHYAVLDEGHKIRNPDAQVTIIAKQLKTEHR 847
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ LTGT +QN + EL++LFD+V PG LG F + P+ G A E+ + A
Sbjct: 848 LLLTGTPIQNNLKELWSLFDFVHPGRLGQLPTFTNEFITPMMVGSYANATEKQVHAAYRC 907
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L +R +L R+K + + + + + ++FC ++D Q+ Y L ++ ++
Sbjct: 908 ACVLRDTIRPCMLHRSKADVQAQISLPPRNEQILFCKLTDDQRALYEHFLASRDVGEILR 967
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+L G L L++I NH +L P+ D PD
Sbjct: 968 GELTAFHGIDL-----------------------------LRKICNHPDLA-PSLADPPD 997
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
P + L + GKM L +L+ W K ++LL
Sbjct: 998 YS-----------DPSVPL--------------PWERSGKMIVLRQLLRIWFQKQHRVLL 1032
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
F + +ML++LE F+ + Y++ RLDG+ RQ L+ FN +P +F+++TR GGLG
Sbjct: 1033 FCQTRQMLNMLESFIKYEHYTYLRLDGTVSVKQRQPLIRYFNDNPEVFIFILTTRTGGLG 1092
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL A+RV+IFDP+WNP+ D+QA++R++R GQ++ V ++RLL+AG++EE +Y RQV+KQ
Sbjct: 1093 LNLTGADRVIIFDPDWNPSVDVQAKERAWRIGQQKPVTIYRLLTAGTIEEKIYHRQVFKQ 1152
Query: 658 QLSNIAVSGKLEKRYFE 674
L+ + ++R+F+
Sbjct: 1153 LLTFKVMKDPKQRRFFK 1169
>gi|345564545|gb|EGX47506.1| hypothetical protein AOL_s00083g315 [Arthrobotrys oligospora ATCC
24927]
Length = 1145
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/601 (33%), Positives = 308/601 (51%), Gaps = 117/601 (19%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKH-GGILGDDMGLGKTI 170
P P + DG ++P I L ++Q+ V +L+ L+ +H GGILGD+MGLGKTI
Sbjct: 365 PSAPDHIVDDG----FKLPGDIAQSLFDYQKTAVNWLWNLHAKQHTGGILGDEMGLGKTI 420
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIY 229
QTIAF+A + S +L VLI+ P++V++ W EF +W VSI
Sbjct: 421 QTIAFIAGLHY------SQLLTKP-------VLIVAPATVLKQWCNEFHKWWPCLRVSIL 467
Query: 230 HGPNRDM-------------------------------------ILEKLEACGVEVLITS 252
H M I++K++A G +LI++
Sbjct: 468 HSSGSGMLSIAADKKAEETIDDDEGLLEVLESAAPSKAQKAAKKIVDKVKAKG-HILIST 526
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
+ + +L + +WE V++DE H+++N ++K+ +A +L++ R L+GT +QN + E
Sbjct: 527 YTGLSTYHKLLLDTDWECVVLDEGHKIRNPEAKITIAAKQLRSTTRFILSGTPIQNNLRE 586
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L++LFD+V PG LG + F E P+K G A I A + L ++ Y+LR
Sbjct: 587 LWSLFDFVYPGKLGIYQVFNENIAIPIKLGGYAGANSTQIHTAFKCAVVLRELINPYMLR 646
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K + ++ K+D V+FC + QK AY ++ PE +++
Sbjct: 647 RLKADVA--VLPPKQDQVLFCNLVVEQKEAYENYIKSPEAFDILSG-------------- 690
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGP 492
+ D L G D L++I NH PD ++
Sbjct: 691 ---KRDVLAGIDV------------LRKICNH-----------PDLCNREK------LSI 718
Query: 493 DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL 552
D D GN V+S GKM+ ++ L+ +W K L+FS +MLDILEKF
Sbjct: 719 DHDYDYGNP----------VRS-GKMQIVKGLLKAWEKDNLKCLIFSQGTQMLDILEKF- 766
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
++K Y + RLDG+T LRQS+VD +N+ P+ QVFL++T+ GG GLNL A R++IFDP+
Sbjct: 767 VKKKYRYLRLDGTTDIKLRQSMVDQYNNDPTLQVFLLTTKVGGYGLNLTGATRIIIFDPD 826
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++RS+R GQK V ++RLLS G++EE +Y RQ+YKQ L+ + ++R
Sbjct: 827 WNPSNDMQARERSWRLGQKHEVRIYRLLSRGTIEEKIYQRQLYKQFLTKKILEDPEQRRA 886
Query: 673 F 673
F
Sbjct: 887 F 887
>gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
Length = 549
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 304/554 (54%), Gaps = 63/554 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++VPA IN RL +QR G++++++LY GG +GD+MGLGKT+Q +FL A+ +
Sbjct: 23 LEVPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAM-AANRFI 81
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYH--GPNRDMILEKLEA 243
DS VL++CP++++ +W E + W+ + H G D + +A
Sbjct: 82 DS-------------VLVVCPATMLSHWLSELAVWAPGLRRIMVHRSGETDDYEEQGADA 128
Query: 244 -CGVE-VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
CG VL+T+++S R + + +W V++DE +++N +++ +A L+T NR+ +
Sbjct: 129 FCGTGIVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLM 188
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + EL++LFD+V PG LGT F + EP+K G A +++A
Sbjct: 189 SGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIV 248
Query: 362 LVAVLRKYLLRRTKEETIG-HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L ++ YLLRR K++ H M GK + V+FC +S Q+ Y L+ E+ ++ +
Sbjct: 249 LRDLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGSV 308
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL-IKPNPRDEPDKQ 479
+L + L++I NH +L + P+ R Q
Sbjct: 309 Q-----------------------------LLKAVTVLRKICNHPDLVVGPDGRTLDSVQ 339
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
+ + D D G +E F+ +S GK++ L K++ W +G + +LF
Sbjct: 340 EESSS--------DNDDDGCFYGDERFVEVS-----GKLQVLAKILPLWHKQGHRFILFC 386
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
+ L+I+E+F ++ + F+RLDG+T RQ LVD FN+ S L++TR GG+GLN
Sbjct: 387 QWRKTLNIIEQFTRKQNWKFARLDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLN 446
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
+ ANRVVIFDP+WNP D QA++R++RFGQK+ V V+RL++AG++EE +Y RQ++K +
Sbjct: 447 VTGANRVVIFDPDWNPQTDAQARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAI 506
Query: 660 SNIAVSGKLEKRYF 673
+N + ++R F
Sbjct: 507 TNQVLQDPKQRRLF 520
>gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
Length = 1043
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/609 (30%), Positives = 315/609 (51%), Gaps = 115/609 (18%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I RL ++Q+ GVK+L++L+ K GGI+GD+MGLGKT+Q IAFLAA+ S
Sbjct: 286 LRIPLDIYDRLFDYQKTGVKWLWELHSLKTGGIIGDEMGLGKTVQVIAFLAALHHSRMYS 345
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNR----- 234
S +++CP ++ W+ E +W F+V + H G +
Sbjct: 346 PS--------------IVVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKEAEDS 391
Query: 235 -------------------DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
D ++EK +++T+++ R+ L +++W ++DE
Sbjct: 392 DASGDDSGDAKRDARLARWDGVVEKTVRSPSGLIVTTYEQLRLLKDTLLDIDWGYAVLDE 451
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
HR++N ++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG F+ +
Sbjct: 452 GHRIRNPDAETTLICKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFQAQF 511
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
P+ G A + A + L ++ Y+LRR K + L K ++V+FC++
Sbjct: 512 ALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYILRRMKSDVEAKLTK-KTEHVLFCSL 570
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
++ Q+ YR L +++ + +G + + + +
Sbjct: 571 TETQRACYRAFLASSDVERI------------------------FEGSKNALYGIDI--- 603
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD ++A A +G PD
Sbjct: 604 --LRKICNH-----------PDLLEREASEKHADYGLPD--------------------R 630
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
GK+ + +++ SW +G ++L+F + +MLDI+E F+ +GY++ R+DGST R +L
Sbjct: 631 SGKLMVVSQVLNSWKDQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPAL 690
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+D+FN S VFL++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQ + V
Sbjct: 691 IDEFNESSHVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDV 750
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF-------QGELF 687
IV+RL++ G++EE VY RQ+YKQ L+N + ++R F+ +D ++ +G+
Sbjct: 751 IVYRLITRGTIEEKVYHRQIYKQFLTNKILRDPQQRRVFKS-KDMRDLFVLHEDAEGDKT 809
Query: 688 GICNLFRDL 696
NLF +L
Sbjct: 810 ETSNLFPEL 818
>gi|410730645|ref|XP_003980143.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
gi|401780320|emb|CCK73467.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
Length = 1090
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 309/608 (50%), Gaps = 133/608 (21%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
I ++P I L +Q+ V++LY+L++ GGI+GD+MGLGKTIQ IAFLA++
Sbjct: 307 IFKIPGDIFSLLFNYQKTCVQWLYELHQQNSGGIIGDEMGLGKTIQIIAFLASL------ 360
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-------------- 230
S +L G VLI+CP++V++ W E W F I H
Sbjct: 361 HHSGLLD-------GPVLIVCPATVMKQWCNELHHWWPPFRTIILHSIGSGMGINQKKNL 413
Query: 231 ------------GPN--------------------RDMILEKLEACGVE---VLITSFDS 255
PN D+ ++ L +E ++IT++
Sbjct: 414 SDEEFENLLMNSNPNDISYEDLQNNTKRKTKSHLENDINIQSLINTVIEKGHIIITTYVG 473
Query: 256 YRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYN 315
R+H L VNW I+DE H+++N S + + C ++KT NRI L+GT +QN ++EL++
Sbjct: 474 LRLHSDKLLNVNWSYAILDEGHKIRNPDSDISITCKKIKTHNRIILSGTPIQNNLIELWS 533
Query: 316 LFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTK 375
LFD++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K
Sbjct: 534 LFDFIYPGKLGTLPVFQQQFIIPINTGGYANASNIQVQTGIKCATALRDLISPYLLRRVK 593
Query: 376 EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCK 435
+ L KE V+FC ++ Q+ Y L E LTQ++ K
Sbjct: 594 NDVAKDLPEKKE-MVLFCKLTQYQRIKYLEFLNSNE----------------LTQIKGGK 636
Query: 436 RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID 495
R VL + L++I NH +LI D +KQ D
Sbjct: 637 R-------------HVLYGIDILRKICNHPDLI-----DRNEKQ--------------YD 664
Query: 496 LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL--- 552
L GN K GKM+ +++L+ W ++ K+LLF+ S +MLDILE F+
Sbjct: 665 LDYGNP-----------KRSGKMQVVKQLLLLWHNEKHKVLLFTQSRQMLDILENFINSE 713
Query: 553 IRKGYSFS------RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
++ FS R+DG+T + RQ LVD FN+ VFL++TR GGLG+NL ANR+
Sbjct: 714 LKSHSEFSTPLKYLRMDGTTNISNRQKLVDQFNNE-DYDVFLLTTRVGGLGINLTGANRI 772
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
+IFDP+WNP+ D+QA++R++R GQKR V ++RL+ AGS+EE +Y RQ++KQ L+N ++
Sbjct: 773 IIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVAGSIEEKIYHRQIFKQFLTNKILTD 832
Query: 667 KLEKRYFE 674
+KR+F+
Sbjct: 833 PKQKRFFK 840
>gi|254568884|ref|XP_002491552.1| Protein involved in transcription-coupled repair nucleotide
excision repair of UV-induced DNA lesion [Komagataella
pastoris GS115]
gi|238031349|emb|CAY69272.1| Protein involved in transcription-coupled repair nucleotide
excision repair of UV-induced DNA lesion [Komagataella
pastoris GS115]
gi|328351939|emb|CCA38338.1| DNA excision repair protein ERCC-6 [Komagataella pastoris CBS 7435]
Length = 1088
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 310/597 (51%), Gaps = 120/597 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P + L ++Q+ V++L++LY K GGILGD+MGLGKT+Q I+F+A +
Sbjct: 295 RLPGDVYPALFDYQKTCVQWLWELYLQKVGGILGDEMGLGKTVQIISFIAGLH------- 347
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH---------------- 230
K++K V+++CP++V++ W EF RW V I H
Sbjct: 348 ----YTKKLNKP--VIVVCPATVLRQWCNEFHRWWPPLRVVILHAIGTGLSGSRTSLQNE 401
Query: 231 ------------GPNRDMILEKLEACGVE----------VLITSFDSYRIHGSILSEVNW 268
G + + K E+ E V+IT++ RI+ L + +W
Sbjct: 402 ASIEKLLEEEEYGSTKSLASLKAESRVKELIDSVFTRGHVIITTYVGLRIYSKHLLKRDW 461
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
I+DE H+++N S + + C +L+T NR+ L+GT +QN + EL++LFD++ PG LGT
Sbjct: 462 GYAILDEGHKIRNPNSDISLTCKQLRTPNRVILSGTPIQNNLTELWSLFDFIFPGRLGTL 521
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F+ + P+ G A +++ + L ++ YLLRR K + + + K +
Sbjct: 522 PVFQNQFAIPINVGGYANATNLQVQVGYKCAVTLKDLISPYLLRRVKAD-VAKDLPKKSE 580
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
V+FC ++ Q Y + L+ E L+++ KR
Sbjct: 581 MVLFCKLTAPQHALYEKFLRSDE----------------LSRILQGKRQ----------- 613
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
VL + L++I NH +L+ + + + +KD SA
Sbjct: 614 --VLYGIDILRKICNHPDLVDVHAKR---RSKKDPTYGSA-------------------- 648
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR---KG--------Y 557
GKM+ ++KL+ W S+G K LLF+ + +MLDILE FL R KG +
Sbjct: 649 ----SKSGKMQVVKKLLELWKSQGHKTLLFTQTRQMLDILESFLERLNAKGAEEEDFVPF 704
Query: 558 SFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQ 617
F R+DG+T +RQSLVD FN+ PS VFL++TR GGLG+NL ANRV+I+DP+WNP+
Sbjct: 705 KFLRMDGTTSIGVRQSLVDVFNNDPSYNVFLLTTRVGGLGVNLTGANRVIIYDPDWNPST 764
Query: 618 DLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
D+QA++R++R GQK+ V ++RL+ AGS+EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 765 DVQARERAWRLGQKKDVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILKDPKQRRFFK 821
>gi|410080572|ref|XP_003957866.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
gi|372464453|emb|CCF58731.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
Length = 1058
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 305/600 (50%), Gaps = 125/600 (20%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ ++P I L +Q+ V++LY+L++ + GGI+GD+MGLGKTIQ IAF+A++
Sbjct: 275 LFKIPGEIYSLLFGYQKTCVQWLYELFQQQSGGIIGDEMGLGKTIQVIAFVASLH----- 329
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEK---- 240
S +L G VLI+CP++V++ W E W I H M ++K
Sbjct: 330 -HSGLLN-------GPVLIVCPATVMKQWVNELHHWWPPLRAIILHAIGSGMSMKKKLTE 381
Query: 241 --LEACGV---------------------------------------EVLITSFDSYRIH 259
LE + +LIT++ RIH
Sbjct: 382 DELEQILLRSTPDEFSYNDFQKSSKAKYALESDMNLVSLIDKVVNNGHILITTYVGLRIH 441
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
L ++NW I+DE H+++N S++ + C +LKTRNRI L+GT +QN + EL++LFD+
Sbjct: 442 SDKLLKINWAYAILDEGHKIRNPNSEIAITCKKLKTRNRIILSGTPIQNNLNELWSLFDF 501
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI 379
+ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 502 ILPGKLGTLPVFQQQFVMPINMGGYANASNIQVQTGYKCAVTLRDIISPYLLRRVKSDVA 561
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L KE V+FC ++ Q+ Y L E L++++ KR
Sbjct: 562 KDLPHKKE-MVLFCKLTQYQRNKYIEFLNSKE----------------LSEIKGGKRH-- 602
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
VL + L++I NH PD KD +G
Sbjct: 603 -----------VLYGIDILRKICNH-----------PDILDKDKLEDDVSYG-------- 632
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK---- 555
+ K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 633 -----------NPKRSGKMQVVKQLLLLWKDEGHKTLLFTQSRQMLDILEQFISYKDPEM 681
Query: 556 -GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWN 614
++ R+DG+T + RQ LVD FN+ + +FL++TR GGLG+NL ANR++IFDP+WN
Sbjct: 682 ENINYLRMDGTTNISKRQELVDRFNNE-NYDLFLLTTRVGGLGVNLTGANRIIIFDPDWN 740
Query: 615 PAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
P+ D+QA++R++R GQKR V ++RL+ +GS+EE +Y RQ++KQ L+N +S +KR+F+
Sbjct: 741 PSTDMQARERAWRIGQKREVSIYRLMVSGSIEEKIYHRQIFKQFLTNKILSDPKQKRFFK 800
>gi|342884633|gb|EGU84838.1| hypothetical protein FOXB_04619 [Fusarium oxysporum Fo5176]
Length = 1160
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 296/562 (52%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA+
Sbjct: 387 LKLPGDIHPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAALH------ 440
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
K+ + V+++ P+++++ W EF RW VSI H M+ K E
Sbjct: 441 -----YSKKLRRP--VIVVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEY 493
Query: 243 -------------------ACGV----EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
GV VL+T++ + + L V W+ ++DE H++
Sbjct: 494 DLDHFQPLATKSEKAAQRIVNGVVKSGHVLVTTYTGLQTYAETLLPVEWDYAVLDEGHKI 553
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 554 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPI 613
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC ++D Q
Sbjct: 614 RQGGYANASNLQVMTAEKCAEALKETIGEYLLQRLKVDVAADLPE-KTEQVLFCKLTDGQ 672
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+AY ++ E+ ++N+ R +L G D L+
Sbjct: 673 HKAYETFIKSDEVSAILNR-----------------RRQSLYGIDI------------LR 703
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ DK G GN + + + L+
Sbjct: 704 KICNHPDLL--------DK----------TLGKKAGYDFGNPKLSAKLQLT-------KD 738
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K LLFS +ML+I+EK + G S+ R+DG TP + RQ ++D FN
Sbjct: 739 LLQKVMIP---NGHKTLLFSQGKQMLNIIEKCISECGISYVRMDGETPVDQRQPMIDRFN 795
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
SP VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQK+ V ++RL
Sbjct: 796 ESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRL 855
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 856 MTEGTIEEKIYHRQIFKQFMTN 877
>gi|449018067|dbj|BAM81469.1| DNA repair and recombination protein RAD26 [Cyanidioschyzon merolae
strain 10D]
Length = 917
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 297/562 (52%), Gaps = 92/562 (16%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P + +P S+ RL +Q+EG+ +L+ L+ GGILGD+MGLGKT+Q IAFLAA+
Sbjct: 175 PGLWLPRSLYERLFPYQKEGLVWLWSLHVQGTGGILGDEMGLGKTVQIIAFLAAL----- 229
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHG----------PN 233
D KG +L++ P +V+ W E + W V + H PN
Sbjct: 230 --------DYSGLLKGPILVVAPVTVLDQWRRELETWWPRLQVRVLHAVLGIGESALQPN 281
Query: 234 RDMILEKLEACGVEVL-ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
+ C +V+ IT+++ RIH S + W+ VI+DE HR++N ++++ C +
Sbjct: 282 Q---------CPSQVIFITNYEHLRIHASWFTSRRWDYVILDEGHRIRNPEAEVTRVCKQ 332
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
L T +RI +TG +QN++ EL++LFD++ PG LGT + F E + P+ G A +
Sbjct: 333 LNTVHRILMTGAPLQNRLCELWSLFDFIYPGRLGTLQSFEEEFSIPISLGGFANATPAQV 392
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
IA L ++ YLLRR K + L K+++V+ C ++ Q+R Y+ L ++
Sbjct: 393 HIAYRCASTLRDLIAPYLLRRLKRDVALQLPQ-KQEHVLLCRLTPEQRRIYQNYLNAIDV 451
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
+ + L NL LP + L++I NH P
Sbjct: 452 ERAADGQL------------------NL-----------LPIITTLRKICNH-------P 475
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
R LA+A D+ + G + L + GK+ AL++L++
Sbjct: 476 R-----------LAAA----DLHVSGSERK------LLRQSTSGKLLALDRLLHQLRETN 514
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
+ L+FS + ML +LEK L + +++ R+DG T LR LVD FN S FL++TR
Sbjct: 515 HRALIFSQTRSMLTLLEKTLNKGQFTYLRMDGETNVALRAELVDRFNHDSSIFAFLLTTR 574
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLGLNL+ A+RV+I+DP+WNPA D QA++R++R GQ+R V+V+RLL+ G++EE +Y R
Sbjct: 575 VGGLGLNLIGADRVIIYDPDWNPASDTQARERAWRIGQERPVVVYRLLTRGTIEEKIYHR 634
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++K LS + ++R+F+
Sbjct: 635 QIFKTFLSEKVLHDPRKRRFFK 656
>gi|294897357|ref|XP_002775945.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882312|gb|EER07761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1009
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 300/576 (52%), Gaps = 66/576 (11%)
Query: 116 LVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
+V D +P + P +I +L Q+EGVKFL+ ++ G +L D+MGLGKTIQT AF
Sbjct: 225 VVSPADRRWPQFECPFAIWDKLFPFQKEGVKFLWNRWREGSGALLADEMGLGKTIQTTAF 284
Query: 176 LAA--VFG--KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN--VSIY 229
L + V G + + ST G VLIICP++++Q WE E W + + I
Sbjct: 285 LISLHVSGILRSTLARSTHAGVGGDTSCGGVLIICPATLVQQWEQEILSWGGVDCGLRIT 344
Query: 230 HGPNRDMILEKLEA------CGVEVLITSFDSYRIH-GSILSEVNWEIVIVDEAHRLKNE 282
+ + EK EA C +L+ SF++YR + G IL E W + ++DEA +++N
Sbjct: 345 GWTSGSTVEEKREAAEEMSECS-GILVVSFEAYRRYCGDILFEYVWSVCVLDEAQKIRNP 403
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
S + + T +RI L+G+ +QN + EL+++ D+VAPG LG+ F E P++ G
Sbjct: 404 DSGITQRVKRMNTPHRIALSGSPIQNSLRELWSICDFVAPGRLGSLPTFEEELATPIERG 463
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG-KEDNVVFCTMSDLQKR 401
R A A + + +LRR K + L + K + V+FC ++ Q
Sbjct: 464 TRPNASPTATTAAYRCAVVVRDLTMPLILRRLKADVQDILALPRKSEQVLFCHLAPEQFE 523
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP----FCLVLPCLVK 457
Y C + ++ C+ GS + + R N G + P F L +
Sbjct: 524 VY----------CEVLSNVRCTTGSSIQRRYGHSR--NERGKTTLPPESLFYLGI----- 566
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
L++I NH +++ P + GG + GK
Sbjct: 567 LRRICNHPDML---------------------LYPGVQADGGYGSEQR---------SGK 596
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L K++ W +G ++L+FS ++ MLDILE+ + KG++ SR+DGSTP R +VDD
Sbjct: 597 LSVLLKILDKWVPQGHRVLIFSQTLGMLDILERKVDEKGWTCSRMDGSTPVKDRAHIVDD 656
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
FNS Q+ L+STR GG+GLNL A+R+VIFDP+WNP D QA++R++R GQK V+++
Sbjct: 657 FNSPEGPQLMLLSTRVGGVGLNLTGADRIVIFDPDWNPMTDAQARERAWRIGQKNEVLIY 716
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
RL++ G++EE +Y +Q++K LS +S ++R F
Sbjct: 717 RLIAMGTVEESMYKKQIFKHYLSQKILSDPRQRRKF 752
>gi|429860233|gb|ELA34975.1| DNA repair protein rhp26 [Colletotrichum gloeosporioides Nara gc5]
Length = 1143
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 300/573 (52%), Gaps = 97/573 (16%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV +L +LY+ GGI+GD+MGLGKT+Q IA +AA+
Sbjct: 377 LKLPGDIHPSLFAYQKTGVHWLAELYEQGVGGIIGDEMGLGKTVQAIAMVAALH------ 430
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG 245
K+DK V+++ P++V++ W EF RW VSI H M+ + +
Sbjct: 431 -----YSKKLDKP--VIVVVPATVMKQWVNEFHRWWPPLRVSILHSSGSGMMNQHEDDSD 483
Query: 246 VE-----------------------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNE 282
++ VL+T++ + + L + +W I+DE H+++N
Sbjct: 484 LDDGGESTNRVAARRIVNRVVKHGHVLVTTYAGLQSYNEELLQHSWGYAILDEGHKIRNP 543
Query: 283 KSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG 342
+++ +AC L T NR+ L+GT +QN + EL++LFD++ P LGT FR ++ P+K G
Sbjct: 544 NAEITVACKHLNTVNRVILSGTPIQNNLTELWSLFDFIFPMRLGTLVSFRTQFELPIKQG 603
Query: 343 QRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRA 402
A + A++ L + +YLL+R K + L K + V+FC ++ Q A
Sbjct: 604 GYANATNLQVMTAEKCATTLKETISQYLLQRLKIDVASDLPE-KTEQVLFCKLTQSQLTA 662
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
Y R I+ D + G +T ++ L G D L++I
Sbjct: 663 YTRF---------ISSD---AVGEIMT-----RKRKALYGIDI------------LRKIC 693
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
NH +L+ D+ ++DA+ D GKM+ +
Sbjct: 694 NHPDLLD-------DRLKRDAKY----------------------DWGDPAKSGKMQMVN 724
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+L+ W G K LLFS + ML+ILEKF+ R G S+ R+DG TP RQ+L+D FN
Sbjct: 725 ELLPMWKRFGHKTLLFSQTKLMLNILEKFIRRMDGVSYVRMDGDTPIEQRQALIDRFNHD 784
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
PS VFL++TR GGLG+NL A R++I+DP+WNP+ D+QA++R++R GQ + V ++RL++
Sbjct: 785 PSIDVFLLTTRTGGLGINLTGATRIIIYDPDWNPSTDMQARERAWRLGQTKPVAIYRLMT 844
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+G++EE +Y RQ++KQ ++N + ++ F+
Sbjct: 845 SGTIEEKIYHRQIFKQFMTNKVLKDPKQRANFD 877
>gi|156841074|ref|XP_001643913.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114542|gb|EDO16055.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 1053
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 304/599 (50%), Gaps = 127/599 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+L + K GGI+GD+MGLGKTIQ IA+LA++
Sbjct: 268 RIPGDIYSLLFNYQKTCVQWLYELNQQKCGGIIGDEMGLGKTIQIIAYLASLH------H 321
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM---------- 236
S +L G +LI+CP++V++ W E W I H M
Sbjct: 322 SGLLD-------GPILIVCPATVMKQWCNELHHWWPPLRTVILHAMGAGMSAKKKISEEE 374
Query: 237 ------------------------------------ILEKLEACGVEVLITSFDSYRIHG 260
+++K+ G V+IT++ R+H
Sbjct: 375 LENLIMTSNAADFSYDEFTSSSKVKSQLESSRSIQELIDKVVNDG-HVIITTYVGLRLHS 433
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
L +VNW ++DE H+++N S++ + C +L+TRNRI L+GT +QN + EL++LFD++
Sbjct: 434 DKLLKVNWSYAVLDEGHKIRNPDSEISLTCKKLRTRNRIILSGTPIQNNLNELWSLFDFI 493
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LGT F++ + P+ G A ++ + L ++ YLLRR K + +
Sbjct: 494 FPGKLGTLPVFQQQFVMPINMGGYANATNIQVQTGYKCAVALRDLVSPYLLRRIKAD-VA 552
Query: 381 HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNL 440
+ K + V+FC ++ Q+ Y L E L Q++ KR
Sbjct: 553 KDLPDKREMVLFCKLTQFQRNKYIEFLNSKE----------------LGQIQNGKRQ--- 593
Query: 441 DGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGN 500
VL + L++I NH PD K+ + +G
Sbjct: 594 ----------VLYGIDILRKICNH-----------PDLLEKENRTLNKAYG--------- 623
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI-----RK 555
D K GKM+ +++L+ W +G K LLF+ S +MLD+LE F+ K
Sbjct: 624 ----------DPKRSGKMQVVKQLLLLWKKEGHKTLLFTQSRQMLDVLEDFISFKDEDLK 673
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
G+ + R+DG+T + RQSLVD FN+ + VFL++TR GGLG+NL A+R++IFDP+WNP
Sbjct: 674 GFKYLRMDGTTNISHRQSLVDKFNNE-NYDVFLLTTRVGGLGVNLTGADRIIIFDPDWNP 732
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+ D+QA++R++R GQKR V ++RLL G++EE +Y RQ++KQ L+N ++ +KR+F+
Sbjct: 733 STDMQARERAWRIGQKREVSIYRLLITGTIEEKIYHRQLFKQFLTNKILTDPKQKRFFK 791
>gi|358399258|gb|EHK48601.1| hypothetical protein TRIATDRAFT_53490 [Trichoderma atroviride IMI
206040]
Length = 1133
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 297/562 (52%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA
Sbjct: 363 LKLPGDIYPSLFGYQKTGVQWLAELYKQSVGGIIGDEMGLGKTVQLIAFIAA-------- 414
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
L +K KK V+++ P+++++ W EF RW VSI H M+ E
Sbjct: 415 ----LHYSKKLKKP-VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDEY 469
Query: 243 -------------------ACGV----EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
GV VL+T++ + + L V W+ ++DE H++
Sbjct: 470 DVEHFSPMATKSEKAARKIVKGVVQKGHVLVTTYTGLQTYADELLHVEWDYAVLDEGHKI 529
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +F++ ++ P+
Sbjct: 530 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPI 589
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC +++ Q
Sbjct: 590 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTESQ 648
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++AY R + E+ ++N+ + +L G D L+
Sbjct: 649 RKAYERFIGSDEVAAILNR-----------------KRQSLYGIDI------------LR 679
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ + +P D +L SA DL
Sbjct: 680 KICNHPDLLDKSLPSKPGYDYGDPKL-SAKLQLTKDL----------------------- 715
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K+LLFS +ML+I+EK + G S+ R+DG TP + RQ ++D FN
Sbjct: 716 -LQKVMIP---NGHKMLLFSQGKQMLNIIEKCIRECGISYLRMDGETPIDQRQPMIDKFN 771
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
+ P VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQ + V ++RL
Sbjct: 772 TDPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQSKPVKIYRL 831
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 832 MTEGTIEEKIYHRQIFKQFMTN 853
>gi|366999540|ref|XP_003684506.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
gi|357522802|emb|CCE62072.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
Length = 1069
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 302/602 (50%), Gaps = 129/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ +++LY+L K GGILGD+MGLGKTIQ IA+LA++ D +
Sbjct: 289 KIPGEIFSLLFNYQKTCIQWLYELNKQNCGGILGDEMGLGKTIQIIAYLASLHHSDRLN- 347
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSR-WSTFNVSIYH----GPNRDMILEKLE 242
G VLI+CP++V++ W EF W I H G +R+ E +
Sbjct: 348 ------------GPVLIVCPATVMKQWCNEFHHWWPPLRTVIIHQIGAGMSRNRKEEDMS 395
Query: 243 ACGVE---------------------------------------------VLITSFDSYR 257
+E +LIT++ R
Sbjct: 396 DSELEQFIMNSNPDEYSYEDMKDHSSRTKSQIKLKSNIVNLIDKVIKDGHILITTYVGLR 455
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+H L +VNW VI+DE H+++N S++ + C +L+T NRI L+GT +QN + EL++LF
Sbjct: 456 VHSDKLLDVNWSNVILDEGHKIRNPNSEIALTCKKLRTPNRIILSGTPIQNNLNELWSLF 515
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
D++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 516 DFIYPGKLGTLPVFQQQFVIPINMGGYANATNVQVQAGYKCATALRDMISPYLLRRVKAD 575
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
L KE V+FC ++ Q+ Y L E++ Q++ KR
Sbjct: 576 VAKDLPTKKE-MVLFCKLTMYQRSKYLEFLNSKELE----------------QIQKGKRQ 618
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH PD +D + +G
Sbjct: 619 -------------VLFGIDILRKICNH-----------PDLLERDNKRLEKSYG------ 648
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-- 555
D K GKM+ +++L+ W +G K L+F+ + +ML+ILE+F+ K
Sbjct: 649 -------------DAKRSGKMQVVKQLLLLWKKQGHKALIFTQTKQMLEILEEFISFKDD 695
Query: 556 ---GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
F R+DGST + RQSLVD FN+ +FL++TR GGLG+NL ANR++IFDP+
Sbjct: 696 ALNNIKFLRMDGSTNISQRQSLVDQFNNEDF-DLFLLTTRVGGLGINLTGANRIIIFDPD 754
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ G++EE +Y RQ++KQ ++N +S +KR+
Sbjct: 755 WNPSTDMQARERAWRIGQKREVSIYRLMVTGTIEEKIYHRQIFKQFIANKILSDPKQKRF 814
Query: 673 FE 674
F+
Sbjct: 815 FK 816
>gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
Length = 1164
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 298/562 (53%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAFLAA+ + +
Sbjct: 388 LKLPGDIHPSLFGYQKTGVQWLAELYKQHVGGIVGDEMGLGKTVQLIAFLAALHYSKKLT 447
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
V+++ P+++++ W EF RW V+I H M+ K+E
Sbjct: 448 RP-------------VIVVAPATLLRQWVSEFHRWWPPLRVAILHASGSGMMDPKVEDEA 494
Query: 243 -------------------ACGV----EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
GV VL+T++ + + L V+W+ ++DE H++
Sbjct: 495 DLDHFKPLATKSEKAARRIVNGVVKNGHVLVTTYAGLQTYADTLLPVHWDYAVLDEGHKI 554
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 555 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPI 614
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC ++D Q
Sbjct: 615 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTDGQ 673
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++AY L+ E+ ++++ +L G D L+
Sbjct: 674 RKAYETFLKSDEVSSILSR-----------------TRQSLYGIDI------------LR 704
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ D L S P D GN + + + L+
Sbjct: 705 KICNHPDLL-------------DKSLGSK---PGYDF--GNPKLSAKLQLT-------KD 739
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K LLFS +ML+I+EK + S+ R+DG TP + RQ ++D FN
Sbjct: 740 LLQKVMIP---NGHKTLLFSQGKQMLNIIEKCIRECDISYVRMDGETPVDQRQPMIDKFN 796
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
P+ VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQK+ V ++RL
Sbjct: 797 EDPNIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQKKPVKIYRL 856
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 857 MTEGTIEEKIYHRQIFKQFMTN 878
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 304/562 (54%), Gaps = 74/562 (13%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I++P +L ++Q+ GV++L +L+ GGIL D+MGLGKT+Q I+FL +
Sbjct: 221 IKIPKDCWEKLYKYQKTGVRWLNELHNQCVGGILADEMGLGKTVQVISFLRGL------- 273
Query: 187 DSTILKDNKVDKKGY--VLIICPSSVIQNWEIEFSRW------STFNVS-IYHGPN---- 233
+ L+D G VLIICP+++I+ W EF W + ++S +HG +
Sbjct: 274 AFSCLEDRGFSFSGLGPVLIICPTTLIRQWLKEFRTWFPLCRVAILHISGSFHGQSAQLI 333
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
R M++ + + VL+TS+ ++ + L + W +I+DE H+++N +++ +A E+
Sbjct: 334 RKMVVSQSDGS---VLLTSYGTFAKNRKHLIDKVWHYIILDEGHKIRNPDAQITLAVKEI 390
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
+T +R+ L+G+ +QN + EL++L D+V PG LG + F + + P+ G A +R
Sbjct: 391 RTPHRLILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGYANATAVQVR 450
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
A + L + YLLRR K++ + + K + V+FC ++ Q++ Y L E
Sbjct: 451 TAYKCACILRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRKLYEEYLSSREC 510
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
+++ + G L+ L+++ NH +L+ P
Sbjct: 511 DRILSGKMDAFVG-----------------------------LITLRKLCNHPDLVTGGP 541
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D D+ + +G GKM+ L+ L+ W +G
Sbjct: 542 NK----------------FNDYDVTA-----DEEMGFGAPCRSGKMQVLKALLKLWKRQG 580
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
K+LLFS S +ML ILEKF+I++ Y + R+DG+T RQ LV++FN + +FL++TR
Sbjct: 581 QKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTVVRSRQLLVEEFNKNNKIFIFLLTTR 640
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLG+NL ANRVVIFDP+WNP+ D+QA++R++R GQ+R V ++RLL+ G++EE +Y R
Sbjct: 641 VGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLTGGTIEEKIYHR 700
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++K LSN + ++R+F+
Sbjct: 701 QIFKVFLSNRILVDPRQRRFFK 722
>gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera]
Length = 1134
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 297/556 (53%), Gaps = 53/556 (9%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ ++P I +L ++Q+ V++L++L+ GG+LGD+MGLGKT+Q IAFLA + +
Sbjct: 312 LFKIPQFIWKKLYKYQKISVQWLWELHLRSLGGLLGDEMGLGKTVQVIAFLAGLDCSELL 371
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-----GPNRDMILE 239
SD + G +IICP+++++ W F W + + H N + ++
Sbjct: 372 SDG-----GRFRGLGPTIIICPATLMEQWVKHFHEWWPILRIVVLHQSGTYNGNLEYLIH 426
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L++ G+ +ITS+ H +L W VI+DE H+++N ++K+ A E T +R+
Sbjct: 427 SLKSGGI--IITSYSGMLKHKDLLVSNQWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRL 484
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A A +
Sbjct: 485 LLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEATALQVA 544
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + Y+LRRTK + H+ + K + V+FC++++ QK+ Y++ L+ ++ ++++
Sbjct: 545 MMLRDAITPYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLRSTDVSFILHE 604
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
G + +L L L++I NH +L + D+
Sbjct: 605 KNNIENGKYRAR--------------------LLIALSALRKICNHPDLYLYTTPIDSDE 644
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
++ FG K GKM + L+ W +G ++LLF
Sbjct: 645 DIDISDETLEKFGY-------------------WKHSGKMIVVRSLLKIWKKQGHRVLLF 685
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ +M+ ILE + + Y++ R+DG+TP + RQ + FN S +FL++TR GGLG+
Sbjct: 686 TQGRQMMHILESLIQNEQYTYLRMDGTTPMSHRQETIRSFNKDSSYFIFLLTTRVGGLGV 745
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL ANRVVI+DP+WNPA D QA++R++R GQ ++V ++RL++AG++EE +Y RQ++K
Sbjct: 746 NLTGANRVVIYDPDWNPATDAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIFKIL 805
Query: 659 LSNIAVSGKLEKRYFE 674
LSN + ++R F+
Sbjct: 806 LSNKVLEDPRQRRLFK 821
>gi|356545882|ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
max]
Length = 1210
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 307/595 (51%), Gaps = 114/595 (19%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P +I L ++Q+ GV++L++L+ + GGI+GD+MGLGKT+Q ++FL A+
Sbjct: 382 LKIPDNIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHF----- 436
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACG 245
S + K + +I+CP ++++ W+ E +W F+V + H +D K A
Sbjct: 437 -SGMYKPS--------IIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDSAPRKKRAKS 487
Query: 246 VE--------------------------------------VLITSFDSYRIHGSILSEVN 267
E +LIT+++ RI G L ++
Sbjct: 488 EETDYESNSKSDSDYEKSVASKSTRKWESLINRVMRSESGLLITTYEQLRILGEQLLDIQ 547
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE HR++N +++ + C +L+T +RI +TG +QNK+ EL++LFD+V PG LG
Sbjct: 548 WGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGV 607
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F + P+ G A + A L ++ YLLRR K + L K
Sbjct: 608 LPVFEAEFSVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPK-KT 666
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
++V+FC+++ Q AYR L +++ + LDG +
Sbjct: 667 EHVLFCSLTSEQVSAYRAFLASTDVEQI------------------------LDGHRNSL 702
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
+ + + +++I NH +L++ RD A PD GN +
Sbjct: 703 YGIDV-----MRKICNHPDLLE---RDH------------AFNDPDY----GNPER---- 734
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTP 567
GKM+ + +++ W +G ++LLF+ + +ML+I E FL G+ + R+DG TP
Sbjct: 735 -------SGKMKVVAQVLNVWKEQGHRVLLFTQTQQMLNIFENFLTTSGHIYRRMDGLTP 787
Query: 568 SNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
R +L+D+FN S +F+++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R
Sbjct: 788 VKQRMALIDEFNDSSEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWR 847
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
GQKR V V+RL++ G++EE VY RQ+YK L+N + +KR+F+ +D K+
Sbjct: 848 IGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA-RDMKDL 901
>gi|346327353|gb|EGX96949.1| DNA repair protein Rhp26/Rad26 [Cordyceps militaris CM01]
Length = 1152
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 290/562 (51%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV+++ +LY + GGI+GD+MGLGKT+Q IAF+AA+ +
Sbjct: 385 LKLPGDIHPSLFGYQKTGVQWMAELYNQRVGGIVGDEMGLGKTVQLIAFVAALHSSKKL- 443
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
K V+++ P+++++ W EF RW VSI H M+ E
Sbjct: 444 ------------KRPVIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDY 491
Query: 243 -------------------ACGV----EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
GV VL+T++ + + L +V WE ++DE H++
Sbjct: 492 DLDHFRPMASKSANAARRIIRGVVTKGHVLVTTYTGLQTYADELLKVEWEYAVLDEGHKI 551
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 552 RNPNAEITVTCKELNTPNRVILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPI 611
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC ++D Q
Sbjct: 612 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTDGQ 670
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++AY L+ E+ ++N+ R +L G D L+
Sbjct: 671 RKAYETFLKSDEVAAILNR-----------------RWQSLYGIDI------------LR 701
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ D+ Q+ E S + L QN
Sbjct: 702 KICNHPDLL-----DKKLSQKAGYEYGSPRLSTKLQLTKDLLQNVMI------------- 743
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
G K+LLFS ML+I+EK + G S+ R+DG TP + RQ ++D FN
Sbjct: 744 ----------PNGHKMLLFSQGKLMLNIIEKCMRDCGISYLRMDGETPVDQRQPMIDRFN 793
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
+ P VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQ + V ++RL
Sbjct: 794 NDPDVHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRL 853
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 854 MTEGTIEEKIYHRQIFKQFMTN 875
>gi|366988021|ref|XP_003673777.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
gi|342299640|emb|CCC67396.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
Length = 1079
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 301/598 (50%), Gaps = 125/598 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAFLA++
Sbjct: 295 KIPGDIFSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQIIAFLASLH------H 348
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMIL------EK 240
S +L G VLI+CP++V++ W E W I H M E+
Sbjct: 349 SGLLN-------GPVLIVCPATVMKQWCNELHHWWPPLRTIILHSTGSGMSTKKNFSEEE 401
Query: 241 LEACGV---------------------------------------EVLITSFDSYRIHGS 261
LE + ++IT++ RIH
Sbjct: 402 LEQAMMNANPNELTCEDFQNRSKTKASLESTFNIQSLIDKVINDGHIIITTYVGLRIHSE 461
Query: 262 ILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVA 321
L +VNW ++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD++
Sbjct: 462 QLLKVNWAYAVLDEGHKIRNPDSDISLTCKKIKTPNRIILSGTPIQNNLIELWSLFDFIY 521
Query: 322 PGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH 381
PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 522 PGKLGTLPVFQQQFVMPINAGGYANATNIQVQTGVKCATALRNLISPYLLRRVKSDVAKD 581
Query: 382 LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
L KE V+FC ++ QK Y L E LTQ+ +R
Sbjct: 582 LPEKKE-MVLFCKLTQYQKNRYLEFLNSNE----------------LTQIRGGRRH---- 620
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
VL + L++I NH +L++ R
Sbjct: 621 ---------VLYGIDILRKICNHPDLLEREER---------------------------- 643
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFS- 560
Q E+ G + K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K S
Sbjct: 644 QYETDYG--NPKRSGKMQVVKQLLLLWHKEGHKTLLFTQSRQMLDILEQFIQFKDSDLSV 701
Query: 561 ----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
R+DG++ + RQ LVD FN+ VFL++TR GGLG+NL ANR++I+DP+WNP+
Sbjct: 702 LKYLRMDGTSNISKRQGLVDQFNNE-DYDVFLLTTRVGGLGVNLTGANRIIIYDPDWNPS 760
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
D+QA++R++R GQKR V ++RL+ +GS+EE +Y RQ++KQ L+N ++ +KR+F+
Sbjct: 761 TDMQARERAWRIGQKREVSIYRLMVSGSIEEKIYHRQIFKQFLTNKILTDPKQKRFFK 818
>gi|303276396|ref|XP_003057492.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545]
gi|226461844|gb|EEH59137.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545]
Length = 1514
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 299/568 (52%), Gaps = 97/568 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++PA RLLEHQ+ +K+L++++ + GG++GD+MGLGKT+Q AFL A+
Sbjct: 634 LRLPAETYDRLLEHQKTSIKWLWEIHCQRAGGVVGDEMGLGKTVQVAAFLCAL------- 686
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWS-TFNVSIYH-------GPNRD 235
++ G LI+CP+++++ W E W+ N I H
Sbjct: 687 ----------ERSGLYQPTLIVCPATMLRQWRRELRAWAPKLNCGILHESAVSAASRAAA 736
Query: 236 MILEKLEACGV---------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+K C + VL+T+++ R+ L V W I+DE H+++N + +
Sbjct: 737 RGSKKQARCNIIRERVRDPKGVLLTTYEHLRVMRDHLLPVRWGYAILDEGHKIRNPDADV 796
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ +L+T +R+ +TG +QN++ EL++LFD+ PG LGT F+ + P++ G
Sbjct: 797 TICAKQLQTVHRLVMTGAPIQNRLAELWSLFDFCFPGKLGTLPVFQAQFAVPIQVGGYSN 856
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A ++ + A L ++ YLLRR K + L K + V+FC M+ Q+ AYR
Sbjct: 857 ASQQQVTTAYRCASMLKELISPYLLRRMKADVDIQLPT-KTEQVLFCPMTQEQREAYRAY 915
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ +++ ++ R + L G D L++I NH +
Sbjct: 916 VHSRDVEEILEG-----------------RREALGGIDV------------LRKIVNHPD 946
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L++ + A +E + +V+ GK +K++
Sbjct: 947 LLERRTK---------------------------AAHEKY---GEVERSGKQLVTQKVLE 976
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W +G ++LLFS + +MLDILE + + GY + R+DG+TP + R +L+D+FN+ + V
Sbjct: 977 LWKEQGHRVLLFSQTQQMLDILEAMVAKAGYPYRRMDGATPVSQRMTLIDEFNTDANVFV 1036
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FL++T+ GGLG+NL A+RV+++DP+WNP+ D QA++R++R GQ R V V+RL++AG++E
Sbjct: 1037 FLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTREVTVYRLVTAGTIE 1096
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
E VY RQ+YK+ L++ + ++R+F+
Sbjct: 1097 EKVYHRQIYKEFLTSKVLKDPKQRRFFK 1124
>gi|358379983|gb|EHK17662.1| hypothetical protein TRIVIDRAFT_160093 [Trichoderma virens Gv29-8]
Length = 1133
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 300/562 (53%), Gaps = 98/562 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P + L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA
Sbjct: 363 LKLPGDVYPSLFGYQKTGVQWLAELYKQNVGGIIGDEMGLGKTVQLIAFIAA-------- 414
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
L +K KK V+++ P+++++ W EF RW VSI H M+ E
Sbjct: 415 ----LHYSKKLKKP-VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDY 469
Query: 243 -------------------ACGV----EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
GV VL+T++ + + +L V W+ ++DE H++
Sbjct: 470 DVEHFSPMATKSEKAARKIVRGVVQKGHVLVTTYTGLQTYADLLLGVEWDYAVLDEGHKI 529
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +F++ ++ P+
Sbjct: 530 RNPNAEITVTCKELNTPNRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPI 589
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC +++ Q
Sbjct: 590 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTEGQ 648
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++AY L+ E+ ++N+ +L G D L+
Sbjct: 649 RKAYETFLRSDEVSAILNR-----------------TRQSLYGIDI------------LR 679
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ D LA + P ++ GN + + + L+
Sbjct: 680 KICNHPDLL-------------DKSLA---YKPGYEV--GNPKMSAKLQLTK-------D 714
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L+K+M G K LLFS +ML+I+EK + G ++ R+DG TP + RQ ++D FN
Sbjct: 715 LLQKVMIP---NGHKTLLFSQGKQMLNIIEKCIRNCGITYLRMDGETPIDQRQPMIDKFN 771
Query: 580 SSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
S P VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQ + V ++RL
Sbjct: 772 SDPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYRL 831
Query: 640 LSAGSLEELVYTRQVYKQQLSN 661
++ G++EE +Y RQ++KQ ++N
Sbjct: 832 MTEGTIEEKIYHRQIFKQFMTN 853
>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi
GB-M1]
Length = 695
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 312/599 (52%), Gaps = 88/599 (14%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP + L +Q++GV+++ +LY+++ GG+L DDMGLGKTIQ I FL A
Sbjct: 143 VPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGA---------- 192
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-PNRDMILEKLEAC-GV 246
+L V K LI+CP++++ W E+ R+ F V I+ G PN D C GV
Sbjct: 193 -LLHSRVVSK---ALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNED--------CEGV 239
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ SY + + W+++I+DE HR+KN+ +++ ++ + ++R R L+GT +
Sbjct: 240 YLM-----SYEKFKAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPI 294
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+++FD+V PG LG+ F E ++E ++ G A + A L +++
Sbjct: 295 QNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLI 354
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
Y+LRRTK + + H + KED +VFC+++ Q Y R+L+ I ++ G
Sbjct: 355 EPYILRRTKSQ-VSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGKANLLSGI 413
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
+ L+++ NH L+ P + ++A
Sbjct: 414 SM-----------------------------LRKVCNHPRLLFPRKLGVSEDCEEEASDE 444
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
++L G + + V S K++ L L+ W S+G+K+L+FS ++RMLD
Sbjct: 445 KNGEDEALELPGAD------VSYDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLD 498
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
I+E+ +RK Y++ R+DG TP++ R LVD FN +FL++T+ GGLGLNL A+R+
Sbjct: 499 IIER-CVRK-YTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRI 556
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
VI+DP+WNP+ D QA++R++R+GQK+ V ++R + ++EE VY +Q++K L +S
Sbjct: 557 VIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSN 616
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
R+F K ELF T +++E + E H C +G
Sbjct: 617 PRLSRFFN-----KSCINELFSFT----------MTGDLVEV-----KTHEVHRCDEEG 655
>gi|443429408|gb|AGC92693.1| DNA excision repair protein ERCC-6-like protein [Heliconius erato]
Length = 947
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 312/616 (50%), Gaps = 87/616 (14%)
Query: 70 TRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPI--- 126
T R + V+K + DD +K+ E+ K R+ L + +G ++ S D +Y +
Sbjct: 99 TSRSRKNVKK--IIDDGDKKLYNERIKNWRNSL---KTALSGTYDEAYCSADIQYVLDDI 153
Query: 127 ------------IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
+ +P I RL +Q+ GVK+L++L++ + GG+LGD+MGLGKT+Q IA
Sbjct: 154 EASEENHELQNGLSIPNYIWKRLYTYQKVGVKWLWELHQVQSGGLLGDEMGLGKTVQIIA 213
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSI 228
FLA + D S + G +I+ P++VI W F W + + S
Sbjct: 214 FLAGLSKSDSGSWGGL---------GPTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSG 264
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
HG N ++ +L + +LIT + +L++ W VI+DE H+++N +++
Sbjct: 265 SHGGNHQKLIRELHSSHGILLITYNGIVKYIKDLLTK-KWHYVILDEGHKIRNPDTQVSK 323
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
+ T ++I +TG+ MQN + EL++LFD++ PG LGT F + + P+ G A
Sbjct: 324 LVKKFDTPHKILITGSPMQNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANAT 383
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLL 407
+ A E + L ++ Y+LRRTK E H+ + K + V+FC ++ Q+ Y L
Sbjct: 384 QHQEATALEIAKALKNIITPYILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYL 443
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
++ +++KD G P VL L L++I NH
Sbjct: 444 MSSTVRSILDKDF--KFGDPFR-------------------ARVLVALTTLRKICNH--- 479
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS--DVKSCGKMRALEKLM 525
PD+ L + +E S + K GKM + L+
Sbjct: 480 ------------------------PDLYLYEAHDDDEEIDEESFGNWKRSGKMSVVHSLL 515
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
W +G + L+FS S ML ILE+ L + + + ++DG+ RQ+L+ FN +
Sbjct: 516 KIWLKQGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGTVSVAQRQNLIKTFNENAKYL 575
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
VFL +TR GGLG+NL A+RV+I+DP+WNPA D QA++R++R GQ+R+V V+RLLSAG++
Sbjct: 576 VFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQQRNVTVYRLLSAGTI 635
Query: 646 EELVYTRQVYKQQLSN 661
EE +Y RQ++K LSN
Sbjct: 636 EEKIYQRQIFKNFLSN 651
>gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 688
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 300/556 (53%), Gaps = 82/556 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P + L E+QR+GV ++ LYK + GG+L DDMGLGKTIQ I FLA +F
Sbjct: 133 FEIPDFLWNSLFEYQRDGVAWMLGLYKREKGGVLADDMGLGKTIQMIVFLAVLF------ 186
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGV 246
NK +K LI+CP++++ W E+ R+ F + P D C
Sbjct: 187 ------HNKSIEKA--LILCPATIVSQWMAEWKRFYPFVRVFFGFPAED--------CR- 229
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
V + S++ ++ ++ W+ +++DE H++KN +++ ++ ++++R+R L+GT +
Sbjct: 230 GVYLMSYEKFKARAK---DLLWDTLVLDEGHKIKNRNAQITLSVKKVRSRSRFVLSGTPI 286
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+++FD+V PG LG+ F E ++E ++ G +A + A L +++
Sbjct: 287 QNNLGELWSMFDFVNPGLLGSHTSFHEEFEEIIRRGGYKSASNLQVEKAYRHSLMLRSLI 346
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI-QCLINKDLPCSCG 425
Y+LRRTK + I H + KED ++FCT++ +Q Y R+L+ I + LI K
Sbjct: 347 EPYILRRTKSQ-ISHKLPSKEDKIIFCTLTPIQIELYNRILESKHIMKVLIGK------- 398
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
+L + L+++ NH L P D + ++A
Sbjct: 399 -----------------------ANLLSGISMLRKVCNHPRLFIPRKEDGSEDLSEEA-- 433
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSD--------VKSCGKMRALEKLMYSWASKGDKILL 537
G NE +GL V S K++ L L+ W S+G+K+L+
Sbjct: 434 ------------SGEKNNEETLGLLKKEESQYGLVSSSCKIKILMDLLKKWKSEGNKVLV 481
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
FS ++RMLDI+EK + + Y++ R+DG T ++ R SLVD FN S +FL++T+ GGLG
Sbjct: 482 FSQTIRMLDIIEKCV--EKYAYLRMDGRTSTSSRSSLVDRFNKDDSIFMFLLTTKVGGLG 539
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL A+R+VI+DP+WNP+ D QA++R++R+GQ++ V ++R + ++EE VY +Q++K
Sbjct: 540 LNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQRKGVEIYRFICKDTIEEKVYQKQIFKD 599
Query: 658 QLSNIAVSGKLEKRYF 673
L +S R+F
Sbjct: 600 LLGKKVLSNPGLSRFF 615
>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
cuniculi]
Length = 695
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 312/599 (52%), Gaps = 88/599 (14%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP + L +Q++GV+++ +LY+++ GG+L DDMGLGKTIQ I FL A
Sbjct: 143 VPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGA---------- 192
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-PNRDMILEKLEAC-GV 246
+L V K LI+CP++++ W E+ R+ F V I+ G PN D C GV
Sbjct: 193 -LLHSRVVSK---ALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNED--------CEGV 239
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ SY + + W+++I+DE HR+KN+ +++ ++ + ++R R L+GT +
Sbjct: 240 YLM-----SYEKFKAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPI 294
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+++FD+V PG LG+ F E ++E ++ G A + A L +++
Sbjct: 295 QNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLI 354
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
Y+LRRTK + + H + KED +VFC+++ Q Y R+L+ I ++ G
Sbjct: 355 EPYILRRTKSQ-VSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGKANLLSGI 413
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
+ L+++ NH L+ P + ++A
Sbjct: 414 SM-----------------------------LRKVCNHPRLLFPRKLGVSEDCEEEASDE 444
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
++L G + + V S K++ L L+ W S+G+K+L+FS ++RMLD
Sbjct: 445 KNGEDEALELPGAD------VSYDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLD 498
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
I+E+ +RK Y++ R+DG TP++ R LVD FN +FL++T+ GGLGLNL A+R+
Sbjct: 499 IIER-CVRK-YTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRI 556
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
VI+DP+WNP+ D QA++R++R+GQK+ V ++R + ++EE VY +Q++K L +S
Sbjct: 557 VIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSN 616
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
R+F K ELF T +++E + E H C +G
Sbjct: 617 PRLSRFFN-----KSCINELFSFT----------MTGDLVEV-----KTHEVHRCDEEG 655
>gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene]
Length = 944
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 314/616 (50%), Gaps = 87/616 (14%)
Query: 70 TRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQV 129
T R + V+K + DD K+ E+ K R+ L + +G ++ + S D +Y + +
Sbjct: 94 TSRPRKNVKK--IIDDGSKKLYNERIKIWRNSL---KTALSGTYDEVYYSADIQYVLDDI 148
Query: 130 PAS---------------INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
AS I RL +Q+ GVK++++L++ + GG+LGD+MGLGKT+Q IA
Sbjct: 149 EASDENHELQNGLCIPNYIWKRLYTYQKVGVKWVWELHQVQSGGLLGDEMGLGKTVQIIA 208
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSI 228
FLA + D S + G +I+ P++VI W F W + + S
Sbjct: 209 FLAGLSKSDSGSWGGL---------GPTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSG 259
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
HG N ++++L + +LIT + +L++ W VI+DE H+++N +++
Sbjct: 260 SHGGNHQKLIKELHSSHGILLITYNGIVKYIKDLLTK-KWHYVILDEGHKIRNPDTQVSK 318
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
+ T ++I +TG+ MQN + EL++LFD++ PG LGT F + + P+ G A
Sbjct: 319 LVKKFDTPHKILITGSPMQNSLQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANAT 378
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLL 407
+ A E + L ++ Y+LRRTK E H+ + K + V+FC ++ Q+ Y L
Sbjct: 379 QHQEATALEIAKALKNIITPYILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYL 438
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
++ +++KD G P+ VL L L++I NH
Sbjct: 439 MGSTVRSILDKD--SKFGDPIR-------------------ARVLVALTTLRKICNH--- 474
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS--DVKSCGKMRALEKLM 525
PD+ L + +E S + K GKM + L+
Sbjct: 475 ------------------------PDLYLYEAHDDDEDIDEESFGNWKRSGKMSVVHSLL 510
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
W +G + L+FS S ML ILE+ L + + + ++DGS RQ+L+ FN +
Sbjct: 511 KIWLKQGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGSVSVAQRQNLIKTFNENAKYL 570
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
VFL +TR GGLG+NL A+RV+I+DP+WNPA D QA++R++R GQ+R+V V+RLLSAG++
Sbjct: 571 VFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQQRNVTVYRLLSAGTI 630
Query: 646 EELVYTRQVYKQQLSN 661
EE +Y RQ++K LSN
Sbjct: 631 EEKIYQRQIFKNFLSN 646
>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
cuniculi GB-M1]
Length = 687
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 312/599 (52%), Gaps = 88/599 (14%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP + L +Q++GV+++ +LY+++ GG+L DDMGLGKTIQ I FL A
Sbjct: 135 VPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGA---------- 184
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-PNRDMILEKLEAC-GV 246
+L V K LI+CP++++ W E+ R+ F V I+ G PN D C GV
Sbjct: 185 -LLHSRVVSK---ALILCPATIVSQWMDEWKRFYPF-VRIFFGFPNED--------CEGV 231
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ SY + + W+++I+DE HR+KN+ +++ ++ + ++R R L+GT +
Sbjct: 232 YLM-----SYEKFKAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPI 286
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+++FD+V PG LG+ F E ++E ++ G A + A L +++
Sbjct: 287 QNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLI 346
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
Y+LRRTK + + H + KED +VFC+++ Q Y R+L+ I ++ G
Sbjct: 347 EPYILRRTKSQ-VSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGKANLLSGI 405
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
+ L+++ NH L+ P + ++A
Sbjct: 406 SM-----------------------------LRKVCNHPRLLFPRKLGVSEDCEEEASDE 436
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
++L G + + V S K++ L L+ W S+G+K+L+FS ++RMLD
Sbjct: 437 KNGEDEALELPGAD------VSYDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLD 490
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
I+E+ +RK Y++ R+DG TP++ R LVD FN +FL++T+ GGLGLNL A+R+
Sbjct: 491 IIER-CVRK-YTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRI 548
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
VI+DP+WNP+ D QA++R++R+GQK+ V ++R + ++EE VY +Q++K L +S
Sbjct: 549 VIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLSN 608
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQG 725
R+F K ELF T +++E + E H C +G
Sbjct: 609 PRLSRFFN-----KSCINELFSFT----------MTGDLVEV-----KTHEVHRCDEEG 647
>gi|453082990|gb|EMF11036.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1270
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 297/580 (51%), Gaps = 103/580 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + L ++Q+ GV++L++LY + GGI+GD+MGLGKT Q I+FLA +
Sbjct: 453 FRVPGDVYPSLFDYQKTGVQWLWELYSQQVGGIVGDEMGLGKTCQVISFLAGLH------ 506
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA-- 243
K+ K ++++CP+++++ W EF RW V+I H M+ K EA
Sbjct: 507 -----YSGKITKP--IIVLCPATLLKQWVDEFHRWWPPLRVTILHSSGSGMLDVKREARF 559
Query: 244 ----------------------------CGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
VL+T++ + L VNWE ++DE
Sbjct: 560 EDDLDDDRRKKSRGRPNPSVRNVIDRVVQDGHVLVTTYAGLVNYADQLLPVNWEYCVLDE 619
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N +++ + C E+ T NR+ L+GT MQN + EL+ LFD+V P LGT +F+ +
Sbjct: 620 GHKIRNPNAEITIFCKEIMTHNRVILSGTPMQNNLEELWTLFDFVFPMRLGTLVNFKNQF 679
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
P+K G A + A + + L + YLL+R K + L K + V+FC +
Sbjct: 680 AIPIKQGGYANASNLQVETAMKCAETLKDAISPYLLQRFKADVATDLPK-KIERVLFCKL 738
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ LQ+ AY+ L +++ ++N + L G D
Sbjct: 739 TKLQRDAYQWFLDSEDMKSIMNG-----------------KRQALYGIDI---------- 771
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L++ + A E IG
Sbjct: 772 --LRKICNHPDLVEHK------------------------TLSKKAGYEYGIGTK----S 801
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-IRKGYSFSRLDGSTPSNLRQSL 574
GKM+ +++L+ W KG K LLF+ MLDILE+F+ G ++ R+DG+T RQ L
Sbjct: 802 GKMQVVKELLKIWKDKGHKTLLFAQHRIMLDILERFIGSMSGINYRRMDGTTDIKHRQDL 861
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
V++FN P VFL++T+ GGLG+NL ANR++I+DP+WNP+ D+QA++R++R GQKR V
Sbjct: 862 VNEFNHDPDLHVFLLTTKVGGLGVNLTGANRIIIYDPDWNPSTDVQARERAWRLGQKREV 921
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++RL++AG++EE +Y RQ++K L+N + +++ F+
Sbjct: 922 EIYRLMTAGTIEEKIYHRQLFKLFLTNKILRDPKQRQNFQ 961
>gi|363748402|ref|XP_003644419.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888051|gb|AET37602.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1037
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 306/599 (51%), Gaps = 127/599 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++LY+LY+ K GGI+GD+MGLGKTIQ I+FLA++
Sbjct: 263 KIPGDIFPLLFDYQKTCVQWLYELYQQKSGGIIGDEMGLGKTIQIISFLASLH------- 315
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------- 237
K+++ VL+ICP++V++ W EF +W F I H M+
Sbjct: 316 ----HSGKLNRP--VLVICPATVLKQWCTEFHKWWPPFRTIILHSIGTGMVNKKKLTEQE 369
Query: 238 -------------------------------------LEKLEACGVEVLITSFDSYRIHG 260
++K+ G VLIT++ +IH
Sbjct: 370 IEEIIMKSKAEEFSYDDYSNFERTKKEIESNYNIKSLIDKVLNLG-HVLITTYVGLKIHA 428
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWV 320
L +V+W V++DE H+++N S++ + C LKT +RI L+GT +QN + EL++LFD++
Sbjct: 429 DELLKVDWGYVVLDEGHKIRNPNSEISLTCKRLKTHHRIILSGTPIQNNLTELWSLFDFI 488
Query: 321 APGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG 380
PG LGT F++ + P+ A ++ + L ++ YLLRR K + +
Sbjct: 489 FPGKLGTLPVFQQQFAVPINSAGYANATNIQVQTGFKCAVALRDLISPYLLRRLKVD-LA 547
Query: 381 HLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNL 440
+ K + V+FC M+ +QK Y + L N D L +++ K+
Sbjct: 548 RDLPKKTEMVLFCKMTQVQKDKYLQFL---------NSD-------DLVKIKNGKKQ--- 588
Query: 441 DGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGN 500
VL + L++I NH PD ++ + + +G
Sbjct: 589 ----------VLFGIDILRKICNH-----------PDLLEREFKKHNISYG--------- 618
Query: 501 AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKG---- 556
D K GKM+ +++L+ W +G K LLF+ S +MLDILE F+ K
Sbjct: 619 ----------DPKRSGKMQVVKRLLQIWHEQGHKALLFTQSRQMLDILESFISSKDPDLS 668
Query: 557 -YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
++ R+DG T R +L+ FN P VFL++TR GGLG+NL ANR++IFDP+WNP
Sbjct: 669 HLTYLRMDGMTDIGHRHALISKFNKEPY-DVFLLTTRVGGLGVNLTGANRIIIFDPDWNP 727
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+ D+QA++R++R GQKR V ++RL+ AGS+EE +Y RQ++KQ L+N +S +KR+F+
Sbjct: 728 STDIQARERAWRIGQKREVSIYRLMVAGSIEEKIYHRQIFKQFLTNKILSDPNQKRFFK 786
>gi|400599789|gb|EJP67480.1| transcription-coupled repair protein CSB/RAD26 [Beauveria bassiana
ARSEF 2860]
Length = 1154
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 293/563 (52%), Gaps = 100/563 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV++L +LYK + GGI+GD+MGLGKT+Q IAFLAA+ +
Sbjct: 387 LKLPGDIHPSLFGYQKTGVQWLAELYKQRVGGIVGDEMGLGKTVQLIAFLAALHSSKKL- 445
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE--- 242
K V+++ P+++++ W EF RW VSI H M+ E
Sbjct: 446 ------------KRPVIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDDY 493
Query: 243 -------ACGV----------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
G VL+T++ + + L V WE ++DE H++
Sbjct: 494 DLDHFRPVAGKSVKAARRIIRAVVDKGHVLVTTYTGLQTYAEELLRVEWEYAVLDEGHKI 553
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +FR ++ P+
Sbjct: 554 RNPNAEITVTCKELNTPNRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPI 613
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC ++D Q
Sbjct: 614 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTDGQ 672
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
++AY L E+ ++N+ R +L G D L+
Sbjct: 673 RKAYETFLGSDEVSAILNR-----------------RRQSLYGIDI------------LR 703
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ +K +E A +G + K++
Sbjct: 704 KICNHPDLL----------DKKLSEKAGYDYG-------------------SPRLSTKLQ 734
Query: 520 ALEKLMYS-WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+ + G K+LLFS ML+I+EK + G S+ R+DG TP + RQ ++D F
Sbjct: 735 LTKDLLQNVMIPNGHKMLLFSQGKLMLNIIEKCMRDCGISYLRMDGETPVDQRQPMIDRF 794
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
N+ P VFL++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQ + V ++R
Sbjct: 795 NNDPDVHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYR 854
Query: 639 LLSAGSLEELVYTRQVYKQQLSN 661
L++ G++EE +Y RQ++KQ ++N
Sbjct: 855 LMTEGTIEEKIYHRQIFKQFMTN 877
>gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1]
Length = 1055
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 300/591 (50%), Gaps = 117/591 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 262 KLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLH------- 314
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------STFNVSI------ 228
+DK VL++ P++V+ W EF RW S N S+
Sbjct: 315 ----YSGLLDKP--VLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLE 368
Query: 229 --------------YHGP----NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
HG N I++++ G VL+T++ RI+ + W
Sbjct: 369 EYLESTDPDATQSSLHGIKSQINAQEIVDRVMEKG-HVLVTTYVGLRIYSKHILPREWGY 427
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
V++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 428 VVLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPV 487
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
F++ + P+ G + ++ A + L ++ Y+LRR K + + + K + V
Sbjct: 488 FQQEFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSD-VAQDLPKKNEMV 546
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+F ++ +Q+ Y LQ +++ ++ G +
Sbjct: 547 LFVKLTKIQQELYESFLQSEDLESILKGKRNVLMGVDI---------------------- 584
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH PD +D + +G
Sbjct: 585 -------LRKICNH-----------PDLVYRDTLMKRKNYG------------------- 607
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF-----LIRKG-YSFSRLDG 564
D GKM+ L+ L+ W S+ K LLF + +MLDILEKF LI G +++ R+DG
Sbjct: 608 DPAKSGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDG 667
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
STP + RQ LVD FN P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 668 STPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARER 727
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
++R GQKR + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 728 AWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKA 778
>gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
Length = 1055
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 302/591 (51%), Gaps = 117/591 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 262 KLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHY------ 315
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------STFNVSI------ 228
S +L DK VL++ P++V+ W EF RW S N S+
Sbjct: 316 SGLL-----DKP--VLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLE 368
Query: 229 --------------YHGP----NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEI 270
HG N I++++ G VL+T++ RI+ + W
Sbjct: 369 EYLESTDPDATQSSLHGIKSQINAQEIVDRVMEKG-HVLVTTYVGLRIYSKHILPREWGY 427
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
V++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 428 VVLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPV 487
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
F++ + P+ G + ++ A + L ++ Y+LRR K + + + K + V
Sbjct: 488 FQQEFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSD-VAQDLPKKNEMV 546
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+F ++ +Q+ Y LQ +++ ++ G +
Sbjct: 547 LFVKLTKIQQELYESFLQSEDLESILKGKRNVLMGVDI---------------------- 584
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH PD +D + +G
Sbjct: 585 -------LRKICNH-----------PDLVYRDTLMKRKNYG------------------- 607
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF-----LIRKG-YSFSRLDG 564
D GKM+ L+ L+ W S+ K LLF + +MLDILEKF LI G +++ R+DG
Sbjct: 608 DPAKSGKMQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDG 667
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
STP + RQ LVD FN P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 668 STPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARER 727
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
++R GQKR + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 728 AWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKA 778
>gi|255076739|ref|XP_002502040.1| predicted protein [Micromonas sp. RCC299]
gi|226517305|gb|ACO63298.1| predicted protein [Micromonas sp. RCC299]
Length = 1481
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 299/568 (52%), Gaps = 97/568 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P+ RLLEHQR +K+L++L+ + GGI+GD+MGLGKT+Q AFL A+
Sbjct: 615 LRIPSGTYARLLEHQRTSIKWLWELHCQRAGGIIGDEMGLGKTVQVSAFLCAL------- 667
Query: 187 DSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRWS-TFNVSIYH------------ 230
++ G L++CP+++++ W E W+ I H
Sbjct: 668 ----------ERSGLYRPTLVVCPATMLRQWRRELRAWAPALRPVILHESAVSQSALADA 717
Query: 231 -GPNRDMILEKLEACGVE---VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
G + L+ L C + VL+T+++ R+ + V W ++DE H+++N + +
Sbjct: 718 RGNKKSARLKLLRDCVADAKGVLLTTYEHLRLMRDHVLSVRWGYAVLDEGHKIRNPDADV 777
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ +L+T +R+ +TG +QN++ EL++LFD+ PG LGT F+ + P++ G
Sbjct: 778 TICAKQLQTVHRLIMTGAPIQNRLSELWSLFDFCFPGKLGTLPVFQAQFAVPIQLGGYSN 837
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A ++ + A L ++ YLLRR K + +L K + V+FC M+ Q+ AYR
Sbjct: 838 ASQQQVVTAYRCATMLKDLISPYLLRRMKADVNINLPK-KTEQVLFCPMTGEQREAYRSY 896
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ +++ ++ R + L G D L++I NH +
Sbjct: 897 IHSRDVEEILEG-----------------RREALGGIDV------------LRKIVNHPD 927
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L++ + A +E + + + GK+ EK++
Sbjct: 928 LLERTTQ---------------------------AHSEKY---GEAERSGKLLVTEKVLG 957
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV 586
W +G + LLFS + +MLDILE + R GY++ R+DG+TP + R L+D+FN V
Sbjct: 958 LWREQGHRCLLFSQTQQMLDILEAAIARAGYTYRRMDGTTPVSHRMRLIDEFNGDDDVFV 1017
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FL++T+ GGLG+NL A+RV+++DP+WNP+ D QA++R++R GQ + V V+RL++AG++E
Sbjct: 1018 FLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTKEVTVYRLITAGTIE 1077
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
E VY RQ+YK+ L++ + ++R+F+
Sbjct: 1078 EKVYHRQIYKEFLTSKVLKDPKQRRFFK 1105
>gi|340518576|gb|EGR48817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1153
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 293/563 (52%), Gaps = 100/563 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P + L +Q+ GV++L +LYK GGI+GD+MGLGKT+Q IAF+AA
Sbjct: 386 LKLPGDVYPSLFGYQKTGVQWLAELYKQSVGGIIGDEMGLGKTVQLIAFIAA-------- 437
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI-------- 237
L +K KK V+++ P+++++ W EF RW VSI H M+
Sbjct: 438 ----LHYSKKLKKP-VIVVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPSAEDEY 492
Query: 238 -LEKLEACGV-----------------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
LE VLIT++ + + L V W+ ++DE H++
Sbjct: 493 DLEHFSPMATRSNKAAKRIVRGVVQKGHVLITTYTGLQTYAEELLNVEWDYAVLDEGHKI 552
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
+N +++ + C EL T NR+ L+GT +QN + EL++LFD++ P LGT +F++ ++ P+
Sbjct: 553 RNPNAEITVTCKELNTPNRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPI 612
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G A + A++ + L + +YLL+R K + L K + V+FC +++ Q
Sbjct: 613 RQGGYANASNLQVMTAEKCAEALKETISEYLLQRLKVDVAADLPE-KTEQVLFCKLTEGQ 671
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ AY+ L+ E+ ++NK +L G D L+
Sbjct: 672 RNAYQTFLRSDEVSAILNK-----------------TRQSLYGIDI------------LR 702
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+I NH +L+ + ++ A FG D K K++
Sbjct: 703 KICNHPDLL----------DKSLSQKAGYEFG-------------------DPKMSAKLQ 733
Query: 520 ALEKLMYS-WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+ G K LLFS +ML+I+EK + G ++ R+DG TP + RQ ++D F
Sbjct: 734 LTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRNCGITYLRMDGETPIDQRQPMIDKF 793
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
NS P VF+++TR GGLG NL A+R++IFDP+WNP+ DLQA++R++R GQ + V ++R
Sbjct: 794 NSDPDIHVFIMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQNKPVKIYR 853
Query: 639 LLSAGSLEELVYTRQVYKQQLSN 661
L++ G++EE +Y RQ++KQ ++N
Sbjct: 854 LMTEGTIEEKIYHRQIFKQFMTN 876
>gi|196000388|ref|XP_002110062.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
gi|190588186|gb|EDV28228.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
Length = 1207
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 318/590 (53%), Gaps = 102/590 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ VP I +L ++Q++GV+++++L++ GGI+GD+MGLGKTIQ IAFLAA+
Sbjct: 421 LSVPGGIWKKLFKYQQDGVRWMWELHRQDAGGIIGDEMGLGKTIQVIAFLAAL-----KY 475
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILE 239
+ K G VLI+CP++V++ W EF +W F ++I+H G ++ +
Sbjct: 476 SKLPQRHGKYTGLGPVLIVCPATVLEQWVAEFHKWWPPFRIAIFHETGSYAGSLESLVKD 535
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ + G+ LIT++ RI+ ++L++ WE V +T +R+
Sbjct: 536 IVYSRGI--LITTYSHVRIYQTLLAQKPWEYV----------------------RTPHRV 571
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTGT MQN + +L++LFD+V PG LGT F E + P+ G A E ++ A +
Sbjct: 572 ILTGTPMQNNLRDLWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANATEVQVQTAYKCA 631
Query: 360 QHLVAVLRKYLLRRTK---EETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L + YLLRRTK ++ HL K ++V+FC ++D Q+ Y++ L+ E+ +I
Sbjct: 632 CVLRDTINPYLLRRTKAGVQKDCLHLP-PKNEHVLFCRLTDFQRCVYQQYLKSDEVAGII 690
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN-PRDE 475
DG + L+ L++I NH L + PR
Sbjct: 691 ------------------------DGRNHA-----FGGLITLRKICNHPHLTNISVPR-- 719
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
K D+E+ +++ LS GKM AL+ L+ W ++
Sbjct: 720 VAKVNVDSEII---------------RSDGHWLLS-----GKMIALKTLLSLWRENKHRV 759
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGG 595
LLF+ + +M +ILEKF+ + Y + R+DG+T + RQSLV FN + + +F+++TR GG
Sbjct: 760 LLFTQTRQMANILEKFVKSENYPYMRMDGTTNISSRQSLVKLFNRNNAIFIFILTTRVGG 819
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LGLNL A+RVVIFDP+WNP+ D+QA++R++R GQ + V ++R L++G++EE +Y RQV+
Sbjct: 820 LGLNLTGADRVVIFDPDWNPSTDMQARERAWRVGQTKEVTIYRFLTSGTIEEKIYHRQVF 879
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
K+ L+N + ++R+F+ +L+ + +L D +DN TS I
Sbjct: 880 KEFLTNRILKNPKQRRFFKS--------NDLYELFSL--DSTDNNETSAI 919
>gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1043
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 195/591 (32%), Positives = 305/591 (51%), Gaps = 116/591 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGILGD+MGLGKTIQ I+FLA +
Sbjct: 272 RLPGDIYPSLFDYQKTCVQWLWELYSQKTGGILGDEMGLGKTIQIISFLAGLHY------ 325
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDMILE-KL 241
S +L DK VLI+ P++V+ W EF RW SI G N I E KL
Sbjct: 326 SGLL-----DKP--VLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNGKNINEAKL 378
Query: 242 EA--------------CGVE-----------------VLITSFDSYRIHGSILSEVNWEI 270
E GV+ VL+T++ RI+ L W
Sbjct: 379 EEFLENADPNSSKSSLSGVKSQINAKEIIDRVMEKGHVLVTTYVGLRIYSKYLLPREWGY 438
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
V++DE H+++N S + + C +KT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 439 VVLDEGHKIRNPDSDISLTCKMIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPV 498
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
F++ + P+ G + ++ A + L ++ Y+LRR K + + + K + V
Sbjct: 499 FQQQFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSD-VAKDLPKKNEMV 557
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+F ++ Q+ Y + LQ ++ ++ KR + L G D
Sbjct: 558 LFVKLTKPQQELYEKFLQSEDLDSILK----------------GKR-NMLMGIDI----- 595
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
L++I NH PD +DA + +G
Sbjct: 596 -------LRKICNH-----------PDLVYRDAMMKKKSYG------------------- 618
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF-----LIRKG-YSFSRLDG 564
D GKM+ L+ L+ W S+ K LLF + +MLDILEKF L+ G +++ R+DG
Sbjct: 619 DPSRSGKMQVLKNLLQIWQSEDHKTLLFCQTRQMLDILEKFVANLPLLNGGEFNYLRMDG 678
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
STP + RQ LVD FN P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R
Sbjct: 679 STPISRRQMLVDKFNRDPNMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARER 738
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
++R GQK+ + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 739 AWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKA 789
>gi|336469238|gb|EGO57400.1| hypothetical protein NEUTE1DRAFT_121828 [Neurospora tetrasperma
FGSC 2508]
gi|350291129|gb|EGZ72343.1| hypothetical protein NEUTE2DRAFT_90539 [Neurospora tetrasperma FGSC
2509]
Length = 1150
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 282/567 (49%), Gaps = 128/567 (22%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ V++L +LY + GGI+GD+MGLGKT
Sbjct: 384 LKLPGDIYPALFDYQKTSVQWLAELYAQQVGGIVGDEMGLGKT----------------- 426
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
P++V++ W EF RW VSI H M
Sbjct: 427 -------------------APATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGAL 467
Query: 237 ---------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
I++++ G VL+T++ + +G IL V+W ++DE
Sbjct: 468 DDREDDYGKRKPKKSSQAAKKIVDRVVKHG-HVLVTTYAGLQTYGDILIPVDWGYAVLDE 526
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD++ P LGT FR +
Sbjct: 527 GHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQF 586
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P+K G A I A + + L + YLL+R K + L K + V+FC +
Sbjct: 587 EIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAADLPK-KSEQVLFCKL 645
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S Q+ AY L+ ++ ++N+ +L G D
Sbjct: 646 SKPQREAYELFLKSDDMTAILNR-----------------TRQSLYGIDI---------- 678
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L+ P +D+P S+ S KS
Sbjct: 679 --LRKICNHPDLLDPRLKDDP----------------------------SYKWGSTSKS- 707
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-GYSFSRLDGSTPSNLRQSL 574
GKM ++ L+ W G K LLF +MLDI+E F+ R+ G ++ R+DG TP RQ+L
Sbjct: 708 GKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKTPVKDRQTL 767
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD FN+ P +FL++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQK+ V
Sbjct: 768 VDQFNNDPDLHLFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKEV 827
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RL++AG++EE +Y RQ++KQ LSN
Sbjct: 828 TIYRLMTAGTIEEKIYHRQIFKQFLSN 854
>gi|85109522|ref|XP_962958.1| hypothetical protein NCU07837 [Neurospora crassa OR74A]
gi|28924603|gb|EAA33722.1| hypothetical protein NCU07837 [Neurospora crassa OR74A]
Length = 1150
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 282/567 (49%), Gaps = 128/567 (22%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I L ++Q+ V++L +LY + GGI+GD+MGLGKT
Sbjct: 384 LKLPGDIYPALFDYQKTSVQWLAELYAQQVGGIVGDEMGLGKT----------------- 426
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
P++V++ W EF RW VSI H M
Sbjct: 427 -------------------APATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGAL 467
Query: 237 ---------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDE 275
I++++ G VL+T++ + +G IL V+W ++DE
Sbjct: 468 DDREDDYGKRKPKKSSQAAKKIVDRVVKHG-HVLVTTYAGLQTYGDILIPVDWGYAVLDE 526
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
H+++N + + + C EL+T NR+ L+GT MQN + EL++LFD++ P LGT FR +
Sbjct: 527 GHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQF 586
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
+ P+K G A I A + + L + YLL+R K + L K + V+FC +
Sbjct: 587 EIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAADLPK-KSEQVLFCKL 645
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S Q+ AY L+ ++ ++N+ +L G D
Sbjct: 646 SKPQREAYELFLKSDDMTAILNR-----------------TRQSLYGIDI---------- 678
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH +L+ P +D+P S+ S KS
Sbjct: 679 --LRKICNHPDLLDPRLKDDP----------------------------SYKWGSTSKS- 707
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-GYSFSRLDGSTPSNLRQSL 574
GKM ++ L+ W G K LLF +MLDI+E F+ R+ G ++ R+DG TP RQ+L
Sbjct: 708 GKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKTPVKDRQTL 767
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
VD FN+ P +FL++T+ GGLG NL ANRV+IFDP+WNP+ D+QA++R++R GQK+ V
Sbjct: 768 VDQFNNDPDLHLFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKKEV 827
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RL++AG++EE +Y RQ++KQ LSN
Sbjct: 828 TIYRLMTAGTIEEKIYHRQIFKQFLSN 854
>gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
Length = 1203
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 297/562 (52%), Gaps = 73/562 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ GV++L++LY+ GGI+GD+MGLGKTIQ I+F+A + + +
Sbjct: 381 FRIPGDIFPALFDYQKTGVQWLWELYQQNVGGIIGDEMGLGKTIQAISFVAGLHYSKQLT 440
Query: 187 DSTILKDNKVDK-----KGYVLIICPSSVIQNW-------EIEFSRWSTFNVSIY-HGPN 233
I+ N+ K + +L S ++ E+E + ++ ++ G
Sbjct: 441 KPVIVWVNEFHKWWPALRVSILHTSGSGMLDTRREDRLEREMELRSYGDYDATLTGAGKQ 500
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
ILE+++ G VL+T++ + + L +WE I+DE H+++N + + + C EL
Sbjct: 501 AKKILERVKHDG-HVLVTTYSGLQTYSEFLIPTDWECAILDEGHKIRNPNTSITIHCKEL 559
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
+T NRI L+GT MQN + EL++LFD+V P LGT +FR ++ P+K G A
Sbjct: 560 RTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFE 619
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A + + L + YLL+R K + L KE V+FC ++ Q+ AY L +++
Sbjct: 620 TAVQCAETLKDAVSPYLLQRFKSDVATDLPQKKE-QVLFCKLTRQQRLAYEGFLASEDMK 678
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ + L G D L++I NH +L
Sbjct: 679 SI-----------------SSGKRQMLYGVDY------------LRKICNHPDL------ 703
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
E + P D A N+S GKM+ +++L+ W G
Sbjct: 704 ---------TEHKTLSKQPGYDY---GAPNKS----------GKMQVVKELLSLWKKGGH 741
Query: 534 KILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTR 592
K LLF+ MLDIL+KFL ++ R+DG T RQ LVD+FN+ P+ VFL++T+
Sbjct: 742 KTLLFAQHRIMLDILQKFLDHIPEINYRRMDGETAIKNRQDLVDEFNNDPNLHVFLLTTK 801
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLG+NL ANRV+I+DP+WNP+ D+QA++RS+R GQKR V ++RL+SAG++EE +Y R
Sbjct: 802 VGGLGVNLTGANRVIIYDPDWNPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHR 861
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q++KQ L+N + +++ F+
Sbjct: 862 QIFKQFLTNKVLKDPKQRQTFQ 883
>gi|354548455|emb|CCE45191.1| hypothetical protein CPAR2_702030 [Candida parapsilosis]
Length = 1011
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 304/595 (51%), Gaps = 121/595 (20%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 304 FKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHY----- 358
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
S +L+ VLI+ P++V+ W EF RW I H M
Sbjct: 359 -SGLLRKP-------VLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMGENAKVSEA 410
Query: 237 -----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
I++++ A G VLIT++ RI+ +
Sbjct: 411 KMEEYMENWDPQTSKSSLKGIKTQINAQKIVDRVVAKG-HVLITTYVGLRIYSKYILPQE 469
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H+++N S + + C ++KT NRI L+GT +QN + EL++LFD++ PG LGT
Sbjct: 470 WGYCVLDEGHKIRNPDSDISLTCKQIKTVNRIILSGTPIQNNLTELWSLFDFIFPGRLGT 529
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F++ + P+ G + ++ A + L ++ YLLRR K + + + K
Sbjct: 530 LPVFQQQFSIPINVGGYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKND-VAKDLPKKS 588
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+F ++ +Q+ Y + L+ ++ ++ + + L G D
Sbjct: 589 EMVLFVKLTRIQQDLYEKFLESEDLNSILKG-----------------KRNVLMGVDV-- 629
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH PD +DA + + +G
Sbjct: 630 ----------LRKICNH-----------PDLVYRDALMHKSNYG---------------- 652
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--------KGYSF 559
D K GKM+ L+ L+ W S+G K LLF + +MLDILEKF+ + +++
Sbjct: 653 ---DPKKSGKMQVLKNLLQLWQSEGHKTLLFCQTRQMLDILEKFVSNLPCLNDQAQYFTY 709
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DGST + RQSLVD+FN+ P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+
Sbjct: 710 LRMDGSTAISQRQSLVDEFNNDPNVHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDI 769
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
QA++R++R GQK+ + ++RL++ GS+EE +Y RQ++K L N + ++R+F+
Sbjct: 770 QARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKDPKQRRFFK 824
>gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1153
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 298/574 (51%), Gaps = 99/574 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ GV +L +LY+ GGI+GD+MGLGKT+Q IAF+AA+
Sbjct: 377 LKLPGDIHPSLFAYQKTGVNWLAELYEQGVGGIIGDEMGLGKTVQAIAFVAALHY----- 431
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH--------------- 230
S IL DK V+++ P++V+Q W EF RW VSI H
Sbjct: 432 -SKIL-----DKP--VIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMINVNEDDDD 483
Query: 231 ---------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
GP I++++ G VL+T++ + L W ++DE H+++N
Sbjct: 484 EPYSGSGKNGPAARQIIKRVVKHG-HVLVTTYAGLHSYQDELLSYEWGYAVLDEGHKIRN 542
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
+ + +AC +L T +R+ L+GT +QN ++EL++LFD++ P LGT FR+ ++ P++
Sbjct: 543 PNADITIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIYPMRLGTLVSFRQQFEMPIRM 602
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
G A + A++ L + KYLL+R K + L K + V+FC ++ Q
Sbjct: 603 GGHANATNLAVLTAEKCATTLKEAISKYLLQRLKTDVASDLPE-KTEQVLFCKLTPEQNE 661
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
Y R + + ++ K+ L G D L++I
Sbjct: 662 EYVRFIHSDAVSQIM-----------------AKKRQALYGIDI------------LRKI 692
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
NH +L+ + +P G D GN + S K++ +
Sbjct: 693 CNHPDLVNVRKKGQP--------------GYDW----GNPRRSS-----------KLQTV 723
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNS 580
+L+ W G K LLFS + MLDIL++F+ + +G ++ R+DG RQ+L+D FN
Sbjct: 724 GELLPLWKRFGHKTLLFSQTKIMLDILQEFIGKMEGMNYLRMDGEVAVEKRQALIDRFNH 783
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
PS VFL++T+ GGLG+NL A R+VI+DP+WNP+ DLQA++R++R GQ + V ++RL+
Sbjct: 784 DPSIHVFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAWRLGQTKPVAIYRLM 843
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++G++EE +Y RQ++KQ ++N + ++ F+
Sbjct: 844 TSGTIEEKIYHRQIFKQFMTNKVLKDPKQRANFD 877
>gi|308800854|ref|XP_003075208.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri]
gi|116061762|emb|CAL52480.1| Cockayne syndrome group B (ISS), partial [Ostreococcus tauri]
Length = 1134
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 296/563 (52%), Gaps = 88/563 (15%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ +P RLL HQ+ +K+L++L+ + GGI+GD+MGLGKT+Q +FL A+ S
Sbjct: 329 LSIPGDTYERLLPHQKTCLKWLWELHCQRAGGIIGDEMGLGKTVQVSSFLCALHHSGMYS 388
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYH------------GPN 233
S +I+CP+++++ W E W+ +I H
Sbjct: 389 PS--------------IIVCPATMLRQWRRELRIWAPKLKATILHDSAMSSSSGKTKARE 434
Query: 234 RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
R+ + + G +L+T+++ R+ + V W ++DE H+++N + + + +L
Sbjct: 435 RERVFDMCVRDGDGILVTTYEQMRLFRDKICSVRWGYAVLDEGHKIRNPDADITIVSKQL 494
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
+T +RI ++G +QN++ EL++LFD+V PG LGT F+ + P++ G A + +
Sbjct: 495 QTVHRIVMSGAPIQNRLSELWSLFDFVFPGKLGTLPVFQAQFAVPIQIGGYTNASNQQVT 554
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
A L ++ YLLRR K + + + K + V+FC M+ Q+ AYR L E++
Sbjct: 555 TAYRCAVTLKDLIAPYLLRRMKCD-VDVKLPEKTEQVLFCPMTQEQREAYRAYLASREVE 613
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+++ GS + L G D L++I NH
Sbjct: 614 EILD-------GSR----------EALGGIDV------------LRKIVNH--------- 635
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
PD + + AS +G D GK++ K++ W +G
Sbjct: 636 --PDLLERRTQAASEEYG-------------------DASRSGKLQVTLKVLSLWREQGH 674
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
+ L+FS + +MLDILE + R GYS+ R+DG+T +R SL+D+FN + VFL++T+
Sbjct: 675 RCLVFSQTQQMLDILEAAVARAGYSYRRMDGNTSIGMRMSLIDEFNDNDKGIFVFLLTTK 734
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
GGLG+NL ANRV++FDP+WNP+ D QA++R++R GQ++ V V+RL++AG++EE VY R
Sbjct: 735 VGGLGVNLTGANRVMLFDPDWNPSTDAQARERAWRIGQQKEVTVYRLITAGTIEEKVYHR 794
Query: 653 QVYKQQLSNIAVSGKLEKRYFEG 675
Q+YK+ L++ + ++R+F+
Sbjct: 795 QIYKEFLTSKVLKDPKQRRFFKA 817
>gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination
protein rad26 homologue, putative [Candida dubliniensis
CD36]
gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1054
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 300/590 (50%), Gaps = 115/590 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 265 KLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLH------- 317
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------IL 238
+DK VLI+ P++V+ W EF RW I H M +
Sbjct: 318 ----YSGLLDKP--VLIVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMSGAVSESKLE 371
Query: 239 EKLEAC----------GVE-----------------VLITSFDSYRIHGSILSEVNWEIV 271
E LE+ G++ VL+T++ RI+ + W V
Sbjct: 372 EYLESTDPDSTQSSLHGIKSQINAQEIIDRVMEKGHVLVTTYVGLRIYSKHILPREWGYV 431
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD+V PG LGT F
Sbjct: 432 VLDEGHKIRNPDSDISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVF 491
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
++ + P+ G + ++ A + L ++ Y+LRR K + + + K + V+
Sbjct: 492 QQQFSIPINIGGYANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSD-VAQDLPKKNEMVL 550
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
F ++ +Q+ Y LQ +++ ++ KR + L G D
Sbjct: 551 FVKLTKIQQELYESFLQSEDLESILK----------------GKR-NVLMGVDI------ 587
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH PD +D + +G D
Sbjct: 588 ------LRKICNH-----------PDLVYRDTLMKKKNYG-------------------D 611
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF-----LIRKG-YSFSRLDGS 565
GKM+ L+ L+ W + K LLF + +MLDILEKF LI G + + R+DGS
Sbjct: 612 PAKSGKMQVLKNLLRLWQHENHKTLLFCQTRQMLDILEKFVANLSLINGGDFKYLRMDGS 671
Query: 566 TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
TP + RQ LVD FN P VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA++R+
Sbjct: 672 TPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERA 731
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
+R GQKR + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 732 WRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFKA 781
>gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia]
Length = 954
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 285/540 (52%), Gaps = 63/540 (11%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP I +L + QR GVK+L++L++ + GG+LGD+MGLGKTIQ IAFLA + D S
Sbjct: 171 VPNFIWKQLYKFQRTGVKWLWELHQVQAGGMLGDEMGLGKTIQIIAFLAGLSNTDMGSWG 230
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKLE 242
+ G +I+ P++VI W F W + + S H N + ++ L
Sbjct: 231 GL---------GPSIIVAPATVIYQWVSHFHFWCPHLRVAVLHHSGSHAGNHNKLIRDLH 281
Query: 243 ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
VLIT + ++S W +I+DE H+++N +++ + +T +++ +T
Sbjct: 282 DSHGIVLITYAGIVKYSKDLMSR-KWHYIILDEGHKIRNPDTQVSKLVKKFETPHKLLIT 340
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
G+ MQN + EL++LFD++ PG LGT F E + +P+ G A E A E + L
Sbjct: 341 GSPMQNNLQELWSLFDFMRPGLLGTYNAFMEHFAQPITQGGYANATEFQEATAMEIAKAL 400
Query: 363 VAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
++ Y+LRRTK E H+ + K + V+FC ++ Q+ Y L ++ +++K+
Sbjct: 401 KIIITPYMLRRTKSEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLMSTTVRSILDKE-- 458
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
G PL +L L L++I NH PD
Sbjct: 459 NKYGEPLR-------------------ARMLVALSTLRKICNH-----------PDLYLY 488
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+A+ D++ + E F K GKM + L+ W +G + L+FS S
Sbjct: 489 EAQ-------EDLEAI----DEEKF---GHWKRSGKMTVVNSLLKIWQKQGHRALIFSQS 534
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLV 601
ML +LE++L + + + ++DGS + RQSL+ FN + VFL +TR GGLG+NL
Sbjct: 535 RAMLCVLEQYLQSQNFKYLKMDGSVLVSQRQSLIKTFNENAEYLVFLSTTRVGGLGVNLT 594
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+RV+++DP+WNPA D QA++R++R GQ+R V V+RLL AG++EE +Y RQ++K LSN
Sbjct: 595 GADRVIVYDPDWNPATDDQAKERAWRIGQERTVTVYRLLCAGTIEEKIYQRQIFKHFLSN 654
>gi|348578047|ref|XP_003474795.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1242
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 320/637 (50%), Gaps = 107/637 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LY++ + GG+L DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGVAFLYSLYRDGRKGGVLADDMGLGKTVQIIAFLSGMF------DASLVT-- 146
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRD----MILEKLEACGVEVL 249
+VL+I P+++I W EF++W+ +HGP++ +L + GV L
Sbjct: 147 ------HVLLIMPTNLISMWVKEFAKWTPGMRAKTFHGPSKGERTRSLLRVQQKTGV--L 198
Query: 250 ITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
IT++ + LS N W+ VI+DEAH++K+ +K + NR+ LTGT
Sbjct: 199 ITTYQMLINNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSATYARAVPASNRLLLTGT 258
Query: 305 IMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
+QN + EL++LFD+ GSL GT + F+ Y+ P+ G+ A + + ++L+
Sbjct: 259 PIQNNLQELWSLFDFACQGSLLGTLKTFKMEYETPIVRGREKDATSGEKALGLKMSENLM 318
Query: 364 AVLRKYLLRRTKEE---------------------TIGHL--MMGKEDNVVFCTMSDLQK 400
+++ Y LRRTKEE TI + + K D +++ + LQ+
Sbjct: 319 EIIKPYFLRRTKEEIQKNRLNIPEVGPTEKNLGVDTIYRMPSLSRKNDLIIWIRLVPLQE 378
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
Y++ + L I K+L SPL ++ K+L CD C +
Sbjct: 379 EIYKKFVSLDYI-----KELLMETHSPLAELGVLKKL-----CDHPRLLSARACRLL--- 425
Query: 461 ISNHLELIKPNPRDEPDKQRKDAE-LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
HLE IK + +DE ++ D + LA A D L+ + GKM
Sbjct: 426 ---HLEAIKISAQDENEEDSSDVDNLAHAT---DTTLM---------------EESGKML 464
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L K + R+DG+ L R+ + F
Sbjct: 465 FLISLLKRLRDEGHQTLVFSQSRQILNIIERLLKNKHFKILRIDGTVTHLLEREKRISLF 524
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 525 QQNKDYSVFLLTTQVGGAGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 584
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQ++K L K RYF QD +E
Sbjct: 585 LITCGTVEEKIYRRQIFKDSLIRQTTGDKKNPFRYFSK-QDLRE---------------- 627
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + K L+ HI
Sbjct: 628 --LFTVEDLQNSATQLQLQSLHAAQRRSDKNLDEHIT 662
>gi|344232266|gb|EGV64145.1| hypothetical protein CANTEDRAFT_122352 [Candida tenuis ATCC 10573]
Length = 1010
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 302/594 (50%), Gaps = 122/594 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I+ L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A +
Sbjct: 256 KLPGDIHPSLFDYQKTCVQWLWELYNQKTGGIIGDEMGLGKTIQVISFIAGLHY------ 309
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM---------- 236
S +L+ VLI+ P++V+ W EF +W I H M
Sbjct: 310 SGLLEKP-------VLIVVPATVLNQWVNEFHKWWPALRCVILHSIGSGMGQKIDENKLE 362
Query: 237 -ILEKLEAC------GV-----------------EVLITSFDSYRIHGSILSEVNWEIVI 272
L++ E GV VLIT++ RI+ L +W +
Sbjct: 363 QFLQQEEGATGKVFKGVRTQINAQQVVNSVMESGHVLITTYVGLRIYSKHLLTKSWGYCV 422
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
+DE H+++N S++ + C +KT NRI L+GT +QN ++EL++LFD+V PG LGT F
Sbjct: 423 LDEGHKIRNPNSEISLLCKRVKTANRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFE 482
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
+ + P+ G A ++ + + L ++ YLLRR K + + + KE+ V+F
Sbjct: 483 QQFSLPINMGGYANASNLQVQTSYKCATILRDLISPYLLRRLKHD-VARDLPKKEEMVLF 541
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
++ Q++ Y L+ +++ ++ KR + L G D
Sbjct: 542 VKLTHYQQQMYESFLESEDLRAIMK----------------GKR-NMLMGVDV------- 577
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH PD LV GN +E + +
Sbjct: 578 -----LRKICNH---------------------------PD--LVNGNKSSEDY---GNS 600
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR------------KGYSFS 560
K GKM KL+ WA K+L+F + +MLDILE+FL R + + +
Sbjct: 601 KRSGKMEVTRKLIQLWALHNHKMLIFCQTRQMLDILERFLHRITKIDGNNMETGEPFEYL 660
Query: 561 RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
R+DG+TP RQ LVD FN+ P VFL++T+ GGLG+NL A+R++I+DP+WNP+ D+Q
Sbjct: 661 RMDGTTPIGKRQYLVDRFNTDPKISVFLLTTKVGGLGINLTGADRIIIYDPDWNPSTDMQ 720
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
A++R++R GQKR ++++RL+ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 721 ARERAWRLGQKRDIVIYRLMITGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 774
>gi|50548883|ref|XP_501912.1| YALI0C16643p [Yarrowia lipolytica]
gi|49647779|emb|CAG82232.1| YALI0C16643p [Yarrowia lipolytica CLIB122]
Length = 1085
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 304/581 (52%), Gaps = 106/581 (18%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+VP I L ++Q+ V++L++L+ K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 286 KVPGEIFNALFDYQKTCVQWLWELHTQKTGGIIGDEMGLGKTIQIISFLAGLH------H 339
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG--------------- 231
S +L V+++CP++V++ W EF +W V I H
Sbjct: 340 SGLLTKP-------VIVVCPATVMKQWVEEFHKWWPALRVVILHSMGEGSKGKKKRKGEI 392
Query: 232 ----PNRDMI-------------LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
+ +MI ++K+ G V++T++ + + S+L + W I+D
Sbjct: 393 DSDDDDDEMIRPTPSSTKNLVETIDKVFKDG-HVVVTTYAGLKSYRSLLLDREWGYCILD 451
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H+++N S++ + C +LKT +R+ L+GT +QN + EL++L D+V PG LGT F
Sbjct: 452 EGHKIRNPDSQITLDCKQLKTVHRLILSGTPIQNNLTELWSLLDFVCPGRLGTLPVFHSQ 511
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCT 394
+ P+ G A ++ A + L ++ YLLRR K + L KE+ V+FC
Sbjct: 512 FAVPINVGGYANATNIQVQTAYKCAVVLRDLIAPYLLRRMKTDVATDLPK-KEEKVLFCK 570
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
++D Q+ Y+ L+ E++ ++ + +L G D
Sbjct: 571 LTDSQRLHYKGFLKSEELKSIL-----------------AGKRQSLFGIDI--------- 604
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
L++I NH PD ++ +A + + G D
Sbjct: 605 ---LRKICNH-----------PDLASREILKKTADY---------------YYG--DPAK 633
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK-GYSFSRLDGSTPSNLRQS 573
GKM+ ++ L+ W +G + LLF + +ML+ILE F + R+DG+TP + RQ
Sbjct: 634 SGKMQVVKALVDLWKKQGHRTLLFCQTRQMLEILEDFFANMPDIKYLRMDGTTPISKRQD 693
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+VD +N S +FL++TR GGLG+NL ANRV+IFDP+WNP+ DLQA++RS+R GQKR+
Sbjct: 694 MVDTYNKDTSYDLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDLQARERSWRLGQKRN 753
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V+V+RL++AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 754 VVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDAKQRRFFK 794
>gi|401417928|ref|XP_003873456.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489686|emb|CBZ24946.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1280
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 320/609 (52%), Gaps = 66/609 (10%)
Query: 110 TGPFEPLVLSKDGEY----------PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGI 159
G P +S+ E+ P +++ A+I RL ++Q+EG+ +L L+ + GGI
Sbjct: 466 AGSASPATISESEEFVWEMEEVTLLPGVRMDAAIYKRLFDYQQEGLLWLLTLHSRRTGGI 525
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
LGD+MGLGKTIQ + A+ S+IL+ G VLI+ P +V++ W E
Sbjct: 526 LGDEMGLGKTIQVAVMINALH------HSSILR-------GPVLIVAPMTVLRQWLAELH 572
Query: 220 RWSTFNVS-IYH-----GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
RW+ + S + H RD +L+ ++ V+IT++ + R H +L ++ VI+
Sbjct: 573 RWAPYVRSCVMHESSGSDTTRDSLLQSVQGTPA-VVITTYAAMRAHCGLLHRTGFQYVIL 631
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H++ N ++ +A T +R+ L+G+ +QN + EL+ LFD+V PG LGT F +
Sbjct: 632 DEGHKISNPEAGATLAAKSFTTPHRLILSGSPIQNSLKELWCLFDFVRPGLLGTMSRFID 691
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
++ P+ + A + A E L A + YLLRR K + + + K + V+
Sbjct: 692 EFEAPIAQSRNARASPLSLATAVECATALQAHIAPYLLRRLKRQ-VNMSLPPKYERVLRV 750
Query: 394 TMSDLQKRAYRRLLQLPEIQCL-------------INKDLPCSCGS---PLTQVECCKRL 437
++D Q Y ++L P +Q L +++D S GS + R
Sbjct: 751 PLTDKQLDQYLQVLSSPVVQRLFAQTVMYGSRSGGLDRDGRDSTGSLHVAGPRANMASRR 810
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELIK-PNPRDEPDK----QRKDAELASAVFGP 492
N G F L + +L+QI NH ++ DE D+ +R A SA+
Sbjct: 811 HN-SGVRLESFRL----MNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISAT 865
Query: 493 DIDLVGGNAQNESFIGLS--DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
Q+ SF + D+ GK+ AL ++ W S G ++L+FS + MLDI+E
Sbjct: 866 R------PGQHRSFRSNNPVDLLGSGKLNALLMMLKEWKSFGHRVLVFSQTRMMLDIIEN 919
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
++ YS+ R+DG+T + RQ L+D FN S V L++TR GG+G+NL+ A+RVVIFD
Sbjct: 920 MCEQQAYSYIRMDGATNGHYRQELMDRFNEDDSIFVALLTTRVGGIGVNLIGADRVVIFD 979
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK 670
P+WNP D+QA++R++R GQKR V V+RL+++GS+EE + RQ+ K +++ + +
Sbjct: 980 PDWNPITDVQARERAWRIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQ 1039
Query: 671 RYFEGVQDC 679
R+F VQD
Sbjct: 1040 RFFN-VQDS 1047
>gi|406606062|emb|CCH42535.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 1061
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/614 (30%), Positives = 306/614 (49%), Gaps = 126/614 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
+V I L ++Q+ GV++LY+LY+ KHGGI+ D+MGLGKTIQ I+FLA +
Sbjct: 299 KVSGDIYPSLFDYQKTGVQWLYELYQQKHGGIISDEMGLGKTIQIISFLAGLH------- 351
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH---------------- 230
K+DK +L++CP++V+ W EF + W F + H
Sbjct: 352 ----YSGKLDKP--ILVVCPATVMTQWVNEFHTWWPPFRTMVLHSIGTGMSKNSVKEEDY 405
Query: 231 -----------------------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
N + I++ L G V+ITS+ RI+ L V+
Sbjct: 406 EKLLLKEGDEVMDEDSSLRSIKKNSNVNAIMDTLLTKG-HVVITSYVGLRIYEEQLLNVD 464
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H++KN S + + LKT NRI L+GT +QN ++EL++LFD++ PG LGT
Sbjct: 465 WGYAVLDEGHKIKNPNSNITILSKRLKTYNRIILSGTPIQNNLVELWSLFDFIFPGRLGT 524
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F++ ++ P+K G A ++I ++ L +++ +LLRR K + + + K+
Sbjct: 525 LPIFQDEFETPIKVGGYANASNLDVKIGYQKAVILKELIQPFLLRRVKMD-VARDLPSKQ 583
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+ C ++ QK Y L+ EI+ S L ++
Sbjct: 584 EFVLMCRLTQYQKEKYLEFLRSFEIK----------IHSYLGAIDL-------------- 619
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH +L DI + G
Sbjct: 620 ----------LRKICNHPDL------------------------ADIHYMEGQK------ 639
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--KGYSFSRLDGS 565
G D GK++ ++ L+ W +G K+LLF+ + +M+ ILEKFL K Y + ++ G
Sbjct: 640 GYGDPAKSGKLQVVKSLLTQWKQEGHKVLLFTQTKQMMVILEKFLKNSFKDYRYMKMSGE 699
Query: 566 TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
T RQ ++ FN+ +FL++T+ GGLG+NL A+RV+IFDP+WNP+ DLQA++R+
Sbjct: 700 TGIGKRQDMIYSFNNE-GYDLFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDLQARERA 758
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGE 685
+R GQK+ V+++RL+ GS+EE +Y RQ++KQ L++ + +KR+F+ + F
Sbjct: 759 WRLGQKKEVLIYRLIIGGSIEEKIYHRQIFKQLLTDKILKDPNQKRFFKNSELHDLFTLS 818
Query: 686 LFG----ICNLFRD 695
F NLF+D
Sbjct: 819 DFDDNSETGNLFKD 832
>gi|339247147|ref|XP_003375207.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
gi|316971517|gb|EFV55276.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
Length = 1202
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 295/583 (50%), Gaps = 86/583 (14%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
E L L+ D Q+P + +L ++Q+ GV +L Y G ILGD+MGLGKT+Q I
Sbjct: 70 ENLALNDD-----FQIPEHLWKKLHKYQKVGVHWLLDCYSKATGAILGDEMGLGKTVQLI 124
Query: 174 AFLAAVFGKDESSDS------------TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
AFL ++F ++ + + + G VLI CP++++ +W E W
Sbjct: 125 AFLISLFVSNKYVQGFQYELWTVEFEFNLHSNFSIYGLGPVLIACPATLLFHWVQELHHW 184
Query: 222 -STFNVSIYH------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVD 274
F V++ H GP ++I ++ G+ LITS+ + L + +W I ++D
Sbjct: 185 WPRFRVAVLHESGSFEGPRENLIRSINKSRGI--LITSYGMMLRFENALLQQHWHIAVLD 242
Query: 275 EAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREF 334
E H ++N +KL +L+T RI +TG+ MQN + EL++LFD+V PG LG+ F
Sbjct: 243 EGHLIRNPDAKLTKIVKQLRTPYRIIITGSPMQNSLRELWSLFDFVYPGLLGSLSVFLRE 302
Query: 335 YDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFC 393
P+ G TA +R A + L + YLLRR K E + + K+++++FC
Sbjct: 303 LGVPITQGGYATATALQVRTAYKCAFILRNAIAPYLLRRMKSEVQAEVNLPSKKEHILFC 362
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
++ QK Y++ E + +++ L G
Sbjct: 363 QLTGPQKSLYKQYANSEECKAILSGKLDIFLG---------------------------- 394
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L L+++ NH +L+ VG N+ + +
Sbjct: 395 -LAYLRKLCNHPDLVS-------------------------RAVGENSNEFGYF-----R 423
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
GKM L L+ W + +ILLFS S +ML+ILE FL ++ Y+ R+DG+T RQS
Sbjct: 424 RSGKMIVLHSLLKLWKQENHRILLFSQSRQMLNILEDFLKKRNYAHLRMDGTTAVGSRQS 483
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+V FN + V L++TR GGLGL+L A+RV+++DP+WNP D QAQ+R++R GQ
Sbjct: 484 IVTTFNENADIFVLLLTTRVGGLGLDLTGADRVILYDPDWNPTTDAQAQERAWRLGQTSD 543
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGV 676
V+V+RL+S+G++EE +Y RQ++KQ L N + ++R+F+G+
Sbjct: 544 VVVYRLVSSGTVEEKIYHRQIFKQFLMNRVLRNSRQRRFFKGL 586
>gi|340054775|emb|CCC49077.1| putative DNA excision repair protein [Trypanosoma vivax Y486]
Length = 1125
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 312/596 (52%), Gaps = 70/596 (11%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P I + S+ RLLE+Q+EGV +L L++ + GGILGD+MGLGKT+Q L A+
Sbjct: 390 PGISLQESVYQRLLEYQKEGVSWLLGLHQQRVGGILGDEMGLGKTVQVAVMLNAL----- 444
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYHGPN-----RDMIL 238
SS + +G LI+ P +V++ W E RW+ + + HG + R+ +L
Sbjct: 445 SSSHKL--------RGPCLIVAPLTVLRQWVAEMHRWAPYMRTCVMHGSSSSSMTREQLL 496
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
++ V+++++ + R H +L E ++ +I+DE H++ N ++ + +A T +R
Sbjct: 497 RSVKGTPA-VVLSTYSAVRQHCCLLHEACFQYIILDEGHKISNPEAIVTLAVKSFPTPHR 555
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I L+GT +QN + EL+ LFD+V PG LGT F E +++P+ + L A + A E+
Sbjct: 556 IILSGTPIQNTLKELWCLFDFVRPGLLGTMSKFVEEFEKPINLSKNLHASPLALATAVEQ 615
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L + +LLRR K + + + + K + V+ C +SD Q AY LL P +Q L+++
Sbjct: 616 AKVLRECIAPFLLRRLKRQVLSNALPEKYERVIRCPLSDSQLEAYVELLTSPRVQTLLSQ 675
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV--------------------LPCLVKL 458
L S + RLD+ +G D + + +L
Sbjct: 676 CLSYS--------QIFGRLDS-EGRDEGGSLHIAGKRFHMMGRGGPNHIRLEAFSVMHEL 726
Query: 459 QQISNHLELIKPNPRDEPDKQR---------------KDAELASAVFGPDIDLVGGNA-Q 502
+QI NH+++ + D R DA + AV G V G +
Sbjct: 727 RQICNHVDIFRLRQAKAADPNRFYEDDDDDDDGTAVNVDASGSLAVGGTSNGKVNGEGPR 786
Query: 503 NESFIGLS-----DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
+ S + + GK+ L +L+ W G + L+FS + MLDI+E ++G+
Sbjct: 787 SRSHLSFRSNHPVNYAGSGKLHVLLRLLNLWRCSGQRALVFSQTRAMLDIIENMCEQEGF 846
Query: 558 SFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQ 617
+ R+DGST S+ RQ L+D FN V L++TR GG+G+NL+ A+RVV+FDP+WNP
Sbjct: 847 VYIRMDGSTNSHHRQELMDRFNEDDRILVALLTTRVGGIGVNLIGADRVVLFDPDWNPVT 906
Query: 618 DLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
D QA++R++R GQ R+V V+RL+++G+LEE + RQ+ K ++ + +R+F
Sbjct: 907 DEQARERAWRIGQTRNVGVYRLIASGTLEESILRRQLAKTYVTEKVLQNPALQRFF 962
>gi|157866587|ref|XP_001687685.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
gi|68125299|emb|CAJ03082.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
Length = 1252
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 317/584 (54%), Gaps = 58/584 (9%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P +++ A+I RLL++Q+EG+ +L L+ + GGILGD+MGLGKTIQ + A+
Sbjct: 455 PGVRMDAAIYNRLLDYQQEGLLWLLTLHSRRTGGILGDEMGLGKTIQVAVMINALH---- 510
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS-IYH-----GPNRDMIL 238
S +L+ G VLI P +V++ W E RW+ + S + H RD +L
Sbjct: 511 --HSGMLR-------GPVLIAAPMTVLRQWLAELHRWAPYVRSCVMHESSGSDTTRDSLL 561
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ ++ V+IT++ + R+H +L ++ VI+DE H++ N ++ +A T +R
Sbjct: 562 QSVQGTPA-VVITTYAAMRVHCGLLHRTGFQYVILDEGHKISNPEAGATLAAKSFTTPHR 620
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+G+ +QN + EL+ LFD+V PG LGT F + ++ P+ + A + A E
Sbjct: 621 LILSGSPIQNSLKELWCLFDFVRPGLLGTMSRFIDEFETPIAQSRNARASPLSLATAVEC 680
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL--- 415
+ L A + Y+LRR K + + + K + V+ ++D Q Y ++L P +Q L
Sbjct: 681 AKALQAHIAPYMLRRLKRQ-VNTSLPPKYERVLRVPLADKQLDQYLQVLSSPAVQRLFAQ 739
Query: 416 ----------INKDLPCSCGS----PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
+++D S GS L +R + G F L + +L+QI
Sbjct: 740 TAMFGSRNGGLDRDGRDSTGSLHVAGLRANMASRR--HSSGVRLESFRL----MNQLRQI 793
Query: 462 SNHLELIK-PNPRDEPDK----QRKDAELASAVFGPDIDLVGGNAQNESFIGLS--DVKS 514
NH ++ DE D+ +R A SA+ Q+ SF + D+
Sbjct: 794 CNHADIYAVQQGADEEDRMMLARRGAAAKLSAISATR------PGQHRSFRSNNPVDLLG 847
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSL 574
GK+ AL ++ W S G ++L+FS + MLDI+E ++ YS+ R+DG+T S+ RQ L
Sbjct: 848 SGKLNALLMMLKEWQSFGHRVLVFSQTRIMLDIIENMCEQQAYSYIRMDGATNSHYRQEL 907
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+D FN S V L++TR GG+G+NL+ A+RVVI+DP+WNP D+QA++R++R GQKR V
Sbjct: 908 MDRFNEDDSIFVALLTTRVGGIGVNLIGADRVVIYDPDWNPITDVQARERAWRIGQKREV 967
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQD 678
V+RL+++GS+EE + RQ+ K +++ + +R+F+ VQD
Sbjct: 968 CVYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQRFFD-VQD 1010
>gi|448116169|ref|XP_004202990.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359383858|emb|CCE79774.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1116
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 303/597 (50%), Gaps = 122/597 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A + D
Sbjct: 307 RLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQVISFIAGLHYSKRLED 366
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDMIL---- 238
VLI+ P++V+ W EF RW SI G N+ +I
Sbjct: 367 P-------------VLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNKALISKEEK 413
Query: 239 ----------------------EKLEACGV--------EVLITSFDSYRIHGSILSEVNW 268
+L+A + +LIT++ RI+ + W
Sbjct: 414 MEELLENADPFSVNKSSLKSYENELKAKDIVDSVFQKGHILITTYVGLRIYSKYILPRKW 473
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
I+DE H+++N S++ + C ++KT NR+ L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 474 GYAILDEGHKIRNPDSEVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPGRLGTL 533
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F++ + P+ G A ++ + L ++ YLLRR K + + + K +
Sbjct: 534 PVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSD-VARDLPKKNE 592
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
V+F +++ Q++ Y + L ++ ++ G +
Sbjct: 593 MVLFVKLTEYQQQLYEKFLDSEDVSAILKGKRNVLMGVDI-------------------- 632
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
L++I NH +LI D D++ + +N ++
Sbjct: 633 ---------LRKICNHPDLI------------------------DRDILS-HRRNYNY-- 656
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL------------IRKG 556
D + GK++ L+ L+ W +G + LLF + +MLDILEKF+ I
Sbjct: 657 -GDPRKSGKLQVLKNLLQLWKKEGHRTLLFCQTRQMLDILEKFVGNLKSISDEGDDIDGK 715
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
+++ R+DGSTP +RQSLVD FN++ VFL++T+ GGLG+NL A+RV+I+DP+WNP+
Sbjct: 716 FNYLRMDGSTPIAVRQSLVDTFNNNNYYHVFLLTTKVGGLGINLTGADRVIIYDPDWNPS 775
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
D+QA++R++R GQK+ + ++RL++AGS+EE +Y RQ++K L+N + ++R+F
Sbjct: 776 TDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFF 832
>gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 308/595 (51%), Gaps = 120/595 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++QR V++L++LY K GGI+GD+MGLGKTIQ ++F+A +
Sbjct: 311 RLPGDIYPSLFQYQRTCVQWLWELYSQKTGGIIGDEMGLGKTIQVVSFIAGLHY------ 364
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM---------- 236
S +L DK V+++ P++V+ W EF + W +I H M
Sbjct: 365 SGLL-----DKP--VIVVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEK 417
Query: 237 -----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
I++++ + G VLIT++ R++ +
Sbjct: 418 IENMMANDDFDLNEDKFLAQQKGLSNAKNIVDRVVSKG-HVLITTYVGLRVYSKYILPHQ 476
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H+++N S + + C +LKT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 477 WGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLGT 536
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F + + P+ G A ++ + L ++ YLLRR K + + + KE
Sbjct: 537 LPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSD-VAQDLPKKE 595
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+F ++ Q+ Y + L ++ ++ KR + L G D+
Sbjct: 596 EMVLFVKLTQYQQDMYEKFLSSEDLHAILK----------------GKR-NMLTGVDT-- 636
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH +L+ D EL L+ N
Sbjct: 637 ----------LRKICNHPDLV-------------DREL----------LLRKKGYN---Y 660
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--------KGYSF 559
G+ + GKM L+ L+ W S+G + LLF + +MLDILEK L+ + +++
Sbjct: 661 GIPN--KSGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNY 718
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DGSTP + RQ LVD FN++ + VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+
Sbjct: 719 MRMDGSTPISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDI 778
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
QA++R++R GQKR ++++RL++AG++EE +Y RQ++K L+N + ++R+F+
Sbjct: 779 QARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 833
>gi|146081503|ref|XP_001464269.1| putative DNA excision repair protein [Leishmania infantum JPCM5]
gi|134068360|emb|CAM66648.1| putative DNA excision repair protein [Leishmania infantum JPCM5]
Length = 1261
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 316/583 (54%), Gaps = 56/583 (9%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P +++ A+I RLL++Q+EG+ +L L+ + GGILGD+MGLGKTIQ + A+
Sbjct: 467 PGVRMDAAIYNRLLDYQQEGLLWLLTLHSRRTGGILGDEMGLGKTIQVAVMINALH---- 522
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS-IYH-----GPNRDMIL 238
S +L+ G VLI+ P +V++ W E RW+ + S + H RD +L
Sbjct: 523 --HSGMLR-------GPVLIVAPMTVLRQWLAELHRWAPYVRSCVMHESSGSDTTRDSLL 573
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ ++ V+IT++ + R+H +L ++ VI+DE H++ N ++ +A T +R
Sbjct: 574 QSVQGTPA-VVITTYAAMRVHCGLLHRTGFQYVILDEGHKISNPEAGATLAAKSFTTPHR 632
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+G+ +QN + EL+ LFD+V PG LGT F + ++ P+ + A + A E
Sbjct: 633 LILSGSPIQNSLKELWCLFDFVRPGLLGTMSRFIDEFETPIALSRNARASPLSLATAVEC 692
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL--- 415
+ L + YLLRR K + + + K + V+ ++D Q Y ++L P +Q L
Sbjct: 693 AKALQTHIAPYLLRRLKRQ-VNTSLPPKYERVLRVPLTDKQLDQYLQVLSSPVVQGLFAQ 751
Query: 416 ----------INKDLPCSCGS---PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
+++D S GS + + R N G F + + +L+QI
Sbjct: 752 TAMYGSRNGGLDRDGRDSTGSLHVAGPRAKMASRRHN-SGVRLESFRV----MNQLRQIC 806
Query: 463 NHLELIK-PNPRDEPDK----QRKDAELASAVFGPDIDLVGGNAQNESFIGLS--DVKSC 515
NH ++ DE D+ +R A SA+ Q+ SF + D+
Sbjct: 807 NHADIYAVQQGADEEDRMMLGRRGAAAKLSAISAAR------PGQHRSFRSNNPVDLLGS 860
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK+ AL ++ W S G ++L+FS + MLDI+E ++ Y + R+DG+T S+ RQ L+
Sbjct: 861 GKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGATNSHYRQELM 920
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D FN S V L++TR GG+G+NL+ A+RVVIFDP+WNP D+QA++R++R GQKR V
Sbjct: 921 DRFNEDVSIFVALLTTRVGGIGVNLIGADRVVIFDPDWNPITDVQARERAWRIGQKREVC 980
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQD 678
V+RL+++GS+EE + RQ+ K +++ + +R+F+ VQD
Sbjct: 981 VYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQRFFD-VQD 1022
>gi|398012529|ref|XP_003859458.1| SNF2 family helicase-like protein, putative [Leishmania donovani]
gi|322497673|emb|CBZ32748.1| SNF2 family helicase-like protein, putative [Leishmania donovani]
Length = 1262
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 316/583 (54%), Gaps = 56/583 (9%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P +++ A+I RLL++Q+EG+ +L L+ + GGILGD+MGLGKTIQ + A+
Sbjct: 467 PGVRMDAAIYNRLLDYQQEGLLWLLTLHSRRTGGILGDEMGLGKTIQVAVMINALH---- 522
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS-IYH-----GPNRDMIL 238
S +L+ G VLI+ P +V++ W E RW+ + S + H RD +L
Sbjct: 523 --HSGMLR-------GPVLIVAPMTVLRQWLAELHRWAPYVRSCVMHESSGSDTTRDSLL 573
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ ++ V+IT++ + R+H +L ++ VI+DE H++ N ++ +A T +R
Sbjct: 574 QSVQGTPA-VVITTYAAMRVHCGLLHRTGFQYVILDEGHKISNPEAGATLAAKSFTTPHR 632
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+G+ +QN + EL+ LFD+V PG LGT F + ++ P+ + A + A E
Sbjct: 633 LILSGSPIQNSLKELWCLFDFVRPGLLGTMSRFIDEFETPIALSRNARASPLSLATAVEC 692
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL--- 415
+ L + YLLRR K + + + K + V+ ++D Q Y ++L P +Q L
Sbjct: 693 AKALQTHIAPYLLRRLKRQ-VNTSLPPKYERVLRVPLTDKQLDQYLQVLSSPVVQGLFAQ 751
Query: 416 ----------INKDLPCSCGS---PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
+++D S GS + + R N G F + + +L+QI
Sbjct: 752 TAMYGSRNGGLDRDGRDSTGSLHVAGPRAKMASRRHN-SGVRLESFRV----MNQLRQIC 806
Query: 463 NHLELIK-PNPRDEPDK----QRKDAELASAVFGPDIDLVGGNAQNESFIGLS--DVKSC 515
NH ++ DE D+ +R A SA+ Q+ SF + D+
Sbjct: 807 NHADIYAVQQGADEEDRMMLGRRGAAAKLSAISAAR------PGQHRSFRSNNPVDLLGS 860
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GK+ AL ++ W S G ++L+FS + MLDI+E ++ Y + R+DG+T S+ RQ L+
Sbjct: 861 GKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGATNSHYRQELM 920
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
D FN S V L++TR GG+G+NL+ A+RVVIFDP+WNP D+QA++R++R GQKR V
Sbjct: 921 DRFNEDVSIFVALLTTRVGGIGVNLIGADRVVIFDPDWNPITDVQARERAWRIGQKREVC 980
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQD 678
V+RL+++GS+EE + RQ+ K +++ + +R+F+ VQD
Sbjct: 981 VYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQRFFD-VQD 1022
>gi|448535812|ref|XP_003871023.1| Rad26 protein [Candida orthopsilosis Co 90-125]
gi|380355379|emb|CCG24897.1| Rad26 protein [Candida orthopsilosis]
Length = 1005
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 182/593 (30%), Positives = 299/593 (50%), Gaps = 119/593 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 299 RLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHY------ 352
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM---------- 236
S +L VL++ P++V+ W EF RW I H M
Sbjct: 353 SGLLHKP-------VLVVVPATVMNQWVNEFHRWWPPLRCVILHSIGSGMGNDAKISEAK 405
Query: 237 ILEKLEAC----------GVE-----------------VLITSFDSYRIHGSILSEVNWE 269
+ E LE G++ VLIT++ RI+ + W
Sbjct: 406 MEEYLETWDPQTSKKSLRGIKSQINAQKIVNTVVEKGHVLITTYVGLRIYSKYILPQEWG 465
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
++DE H+++N S + + C ++KT NRI L+GT +QN + EL++LFD+V PG LGT
Sbjct: 466 YCVLDEGHKIRNPDSDISLTCKQIKTVNRIILSGTPIQNNLTELWSLFDFVFPGRLGTLP 525
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
F++ + P+ G + ++ A + L ++ YLLRR K + + + K +
Sbjct: 526 VFQQQFSIPINVGGYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKND-VAKDLPKKSEM 584
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
V+F ++ +Q+ Y + L ++ ++ G +
Sbjct: 585 VLFVKLTRVQQDLYEKFLDSEDLNSILRGKRNVLMGVDM--------------------- 623
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
L++I NH PD ++A + A +G
Sbjct: 624 --------LRKICNH-----------PDLIYREALMHKASYG------------------ 646
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--------KGYSFSR 561
D K GKM+ L+ L+ W ++G K LLF + +MLDILEKF+ K +++ R
Sbjct: 647 -DPKKSGKMQVLKNLLQLWQNEGHKTLLFCQTRQMLDILEKFVSNLSLLNNESKHFTYLR 705
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
+DGST + RQ+LVD+FN+ PS VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA
Sbjct: 706 MDGSTAISQRQNLVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQA 765
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R++R GQK+ + ++RL++ GS+EE +Y RQ++K L N + ++R+F+
Sbjct: 766 RERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKDPKQRRFFK 818
>gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1159
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 304/594 (51%), Gaps = 121/594 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A +
Sbjct: 320 KLPGDIYPSLFDYQKTCVQWLWELYLQKTGGIIGDEMGLGKTIQIISFIAGLHY------ 373
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDM------ 236
S +L+ VL++ P++V+ W EF RW SI G ++D
Sbjct: 374 SGLLEKP-------VLVVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMSKDKKISEEK 426
Query: 237 ----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNW 268
IL+K++ G VL+T++ R++ + W
Sbjct: 427 LEEFMEDWDPKTSKSSLKGIKSQINAREILDKVQEKG-HVLVTTYVGLRMYSKYILPRQW 485
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
I+DE H+++N S + + C ++KT NR+ L+GT +QN + EL++LFD+V PG LGT
Sbjct: 486 GYCILDEGHKIRNPDSDISLTCKQIKTVNRVILSGTPIQNNLTELWSLFDFVFPGRLGTL 545
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F + + P+K G + ++ A + L ++ YLLRR K++ + + K +
Sbjct: 546 PVFEQQFSVPIKIGGYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKKD-VAQDLPKKNE 604
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
V+F ++ Q+ Y + L E+ ++ KR + L G D+
Sbjct: 605 MVLFVRLTKEQQELYEKFLDSEEMDSIVK----------------GKR-NVLVGVDT--- 644
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
L++I NH PD ++A + A +G
Sbjct: 645 ---------LRKICNH-----------PDLIYREALMHRANYG----------------- 667
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--------KGYSFS 560
D GKM+ L+ L+ W S+ K LLF + +MLDILEKF+ K +++
Sbjct: 668 --DPSKSGKMQVLKNLLQLWQSEDHKTLLFCQTRQMLDILEKFVANLHLLGDESKKFNYL 725
Query: 561 RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
R+DG+TP + RQ LVD FN+SP VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+Q
Sbjct: 726 RMDGNTPISRRQQLVDTFNNSPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQ 785
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
A++R++R GQK+ + ++RL++ GS+EE +Y RQ++K L N + ++R F+
Sbjct: 786 ARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKDPKQRRLFK 839
>gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 308/595 (51%), Gaps = 120/595 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++QR V++L++LY K GGI+GD+MGLGKTIQ ++F+A +
Sbjct: 311 RLPGDIYPSLFQYQRTCVQWLWELYLQKTGGIIGDEMGLGKTIQVVSFIAGLHY------ 364
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM---------- 236
S +L DK V+++ P++V+ W EF + W +I H M
Sbjct: 365 SGLL-----DKP--VIVVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEK 417
Query: 237 -----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
I++++ + G VLIT++ R++ +
Sbjct: 418 IENMMANDDFDLNEDKFLAQQKGLSNAKNIVDRVVSKG-HVLITTYVGLRVYSKYILPHQ 476
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H+++N S + + C +LKT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 477 WGYAVLDEGHKIRNPNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLGT 536
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F + + P+ G A ++ + L ++ YLLRR K + + + KE
Sbjct: 537 LPVFEQQFSIPINMGGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSD-VAQDLPKKE 595
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+F ++ Q+ Y + L ++ ++ KR + L G D+
Sbjct: 596 EMVLFVKLTQYQQDMYEKFLSSEDLHAILK----------------GKR-NMLTGVDT-- 636
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH +L+ D EL L+ N
Sbjct: 637 ----------LRKICNHPDLV-------------DREL----------LLRKKGYN---Y 660
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR--------KGYSF 559
G+ + GKM L+ L+ W S+G + LLF + +MLDILEK L+ + +++
Sbjct: 661 GIPN--KSGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNY 718
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DGSTP + RQ LVD FN++ + VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+
Sbjct: 719 MRMDGSTPISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDI 778
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
QA++R++R GQKR ++++RL++AG++EE +Y RQ++K L+N + ++R+F+
Sbjct: 779 QARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 833
>gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-]
gi|74698399|sp|Q9UR24.1|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog
gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe]
gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe]
Length = 973
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 297/588 (50%), Gaps = 114/588 (19%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L +Q V++L++LY + GGI+GD+MGLGKTIQ ++FL S
Sbjct: 269 IPGDIRPHLFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFL-----------S 317
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM----------- 236
++ K K LI+CP+++++ W EF + W+ V + H
Sbjct: 318 SLHHSGKFQKPA--LIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYES 375
Query: 237 -----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
++E + G +LIT++ RI+G ++
Sbjct: 376 DASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRG-HILITTYAGLRIYGDLILPRE 434
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H+++N S++ ++C +++T NRI L+GT +QN + EL+NLFD+V PG LGT
Sbjct: 435 WGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGT 494
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F+ + P+ G A ++ A + L ++ YLLRR K + L K
Sbjct: 495 LPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPK-KS 553
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+FC ++ LQ++AY+ LQ GS + ++ KR L G D
Sbjct: 554 EQVLFCKLTPLQRKAYQDFLQ----------------GSDMQKILNGKR-QMLYGIDI-- 594
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH PD ++ L +
Sbjct: 595 ----------LRKICNH-----------PDLVTREYLLHKEDYN---------------- 617
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGST 566
D + GK++ + L+ W +G + LLFS + +MLDILE L + R+DGST
Sbjct: 618 -YGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGST 676
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
LRQ LVD+FN + VFL++TR GGLG+NL A+RV++FDP+WNP+ D QA++R++
Sbjct: 677 SIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAW 736
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R GQK+ V+V+RL++AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 737 RLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRRFFK 784
>gi|380480210|emb|CCF42568.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1153
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 293/561 (52%), Gaps = 99/561 (17%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P I+ L +Q+ G+ +L +LY+ GGI+GD+MGLGKT+Q IAF+AA+
Sbjct: 376 LRLPGDIHPSLFAYQKTGIHWLAELYEQGVGGIIGDEMGLGKTVQAIAFVAALH------ 429
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM--------- 236
K+DK V+++ P++V+Q W EF RW VSI H M
Sbjct: 430 -----YSKKLDKP--VIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMVNVNEDDDD 482
Query: 237 ---------------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
I++++ G VL+T++ + + L W I+DE H+++N
Sbjct: 483 ESHYRSGRNGAAAHHIVKRVVKHG-HVLVTTYAGLQSYEDDLLSQEWGYAILDEGHKIRN 541
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
+++ +AC +L T +R+ L+GT +QN ++EL++LFD++ P LGT +FR ++ P++
Sbjct: 542 PNAEVTIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIFPMRLGTLVNFRHQFEMPIRM 601
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
G A + A++ L + +YLL+R K + L K + V+FC ++ Q
Sbjct: 602 GGHANATNLAVLTAEKCATTLKETISQYLLQRLKTDVASDLPE-KTEQVLFCKLTPEQNE 660
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
Y R + ++Q+ KR L G D L++I
Sbjct: 661 EYVRFIH----------------SDAVSQIMARKR-QALYGIDI------------LRKI 691
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
NH +L+ + + +P G D + GK++ +
Sbjct: 692 CNHPDLVNVSKKSQP--------------GYD---------------WGSPRRSGKLQMV 722
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNS 580
+L+ W G K LLFS + ML+IL++F+ + +G + R+DG RQ+L+D FN+
Sbjct: 723 GELLPMWKRFGHKTLLFSQTKIMLNILQEFIGKMEGMRYLRMDGEVAVEKRQALIDRFNN 782
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
PS VFL++T+ GGLG+NL A R+VI+DP+WNP+ DLQA++R++R GQ + V ++RL+
Sbjct: 783 DPSIDVFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAWRLGQTKPVAIYRLM 842
Query: 641 SAGSLEELVYTRQVYKQQLSN 661
++G++EE +Y RQ++KQ ++N
Sbjct: 843 TSGTIEEKIYHRQIFKQFMTN 863
>gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus]
gi|182645386|sp|A6QQR4.1|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus]
gi|296470840|tpg|DAA12955.1| TPA: DNA excision repair protein ERCC-6-like [Bos taurus]
Length = 1242
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 321/643 (49%), Gaps = 112/643 (17%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLYEYQKEGIAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--- 247
+VL+I P+S+I W EF +W+ V +HGP++D L C ++
Sbjct: 146 --------NHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNL--CRIQQRN 195
Query: 248 -VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+IT++ + LS +N W+ VI+DEAH++K+ +K + + NRI L
Sbjct: 196 GVIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIPASNRILL 255
Query: 302 TGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++LFD+ GS LGT F+ Y+ P+ + A + + +
Sbjct: 256 TGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALGFKISE 315
Query: 361 HLVAVLRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSD 397
+L+A+++ Y LRRTKEE +G + + K D +++ +
Sbjct: 316 NLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVP 375
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
LQ+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 376 LQEEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACGL- 424
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG-LSD---VK 513
L +A F ++ G ++ + I +SD ++
Sbjct: 425 -------------------------LNLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLME 459
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQ 572
GKM L L+ +G + L+FS S R+L+I+E+ L + + R+DG+ + R+
Sbjct: 460 ESGKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLKNRHFKILRIDGTITHLVERE 519
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
+ F + VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK
Sbjct: 520 KRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKE 579
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICN 691
+V+V+RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 580 NVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE---------- 628
Query: 692 LFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 --------LFTIEDFQNSATQLQLQSLHAAQRRSDKNLDEHIA 663
>gi|426257224|ref|XP_004022232.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ovis aries]
Length = 1242
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 321/643 (49%), Gaps = 112/643 (17%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLYEYQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--- 247
+VL+I P+S+I W EF +W+ V +HGP++D L C ++
Sbjct: 146 --------NHVLLIMPTSLISIWLREFVKWTPGMRVKTFHGPSKDERTRNL--CRIQQRN 195
Query: 248 -VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+IT++ + LS +N W+ VI+DEAH++K +K + + NRI L
Sbjct: 196 GVIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKTSSTKSAICARAIPASNRILL 255
Query: 302 TGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++LFD+ GS LGT F+ Y+ P+ + A + + + +
Sbjct: 256 TGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPQEKALGFKISE 315
Query: 361 HLVAVLRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSD 397
+L+A+++ Y LRRTKEE +G + + K D +++ +
Sbjct: 316 NLMAIIKPYFLRRTKEEVQKKKSSNPEAQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVP 375
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
LQ+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 376 LQEEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACGL- 424
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG-LSD---VK 513
L +A F ++ G ++ + I +SD ++
Sbjct: 425 -------------------------LNLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLME 459
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQ 572
GKM L L+ +G + L+FS S R+L+I+E+ L + + R+DG+ + R+
Sbjct: 460 ESGKMVFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLKNRHFKILRIDGTITHLVERE 519
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
+ F + VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK
Sbjct: 520 KRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKE 579
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICN 691
+V+V+RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 580 NVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE---------- 628
Query: 692 LFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 --------LFTIEDFQNSATQLQLQSLHAAQRRSDKNLDEHIA 663
>gi|444319130|ref|XP_004180222.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
gi|387513264|emb|CCH60703.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
Length = 1177
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 307/605 (50%), Gaps = 130/605 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++L++LY+ K GGI+GD+MGLGKTIQ IAFLA++
Sbjct: 368 KIPGEIFSSLFNYQKTCVQWLHELYQQKCGGIIGDEMGLGKTIQIIAFLASLHH------ 421
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G ++I+CP++V++ W E +W
Sbjct: 422 SNLLN-------GPIIIVCPATVMKQWCAEIHKWWPPFRTIILHSIGAGMLINKKKMSEE 474
Query: 222 STFNVSIYHGPNR----------------------DMILEKLEACGVEVLITSFDSYRIH 259
N+ I PN D ++EK+ G ++IT++ RIH
Sbjct: 475 EMENIIINSNPNEFTYEDFRNSSKIKTETETKSAIDTLVEKVINDG-HIIITTYVGLRIH 533
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
L +VNW+ I+DE H+++N S++ + C ++KT NRI L+GT +QN + EL++LFD+
Sbjct: 534 AESLLKVNWDYAILDEGHKIRNPDSEISLTCKKIKTYNRIILSGTPIQNNLNELWSLFDF 593
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETI 379
+ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 594 IYPGKLGTLPVFQQQFVGPINVGGYANATNIQVQTGYKCAIALRNLISPYLLRRVKADVA 653
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
L KE V+FC +++ Q++ Y L E L Q++ KR
Sbjct: 654 KDLPKKKE-MVLFCKLTEYQRKKYIEFLNSRE----------------LEQIKRGKRQ-- 694
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
VL + L++I NH PDI L
Sbjct: 695 -----------VLFGIDILRKICNH---------------------------PDI-LDCK 715
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRK---- 555
+ I D K GKM+ ++ K K LLF+ S +MLDILE+F+ K
Sbjct: 716 EEEKRQSIQYGDPKRSGKMQVVQTTTSFVEEKNYKTLLFTQSRQMLDILEEFISYKDKDL 775
Query: 556 -GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ----VFLISTRAGGLGLNLVSANRVVIFD 610
G + R+DG+T ++RQ+LVD FN+ + +FL++TR GGLG+NL+ ANR++IFD
Sbjct: 776 QGIKYLRMDGTTSISIRQTLVDKFNNDNDRDDNIDLFLLTTRVGGLGVNLIGANRIIIFD 835
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN-IAVSGKLE 669
P+WNP+ DLQA++R++R GQKR V ++RL+ G++EE +Y RQ++KQ L+N I ++ +
Sbjct: 836 PDWNPSTDLQARERAWRIGQKREVSIYRLMINGTIEEKIYHRQIFKQFLTNKILLNDIKQ 895
Query: 670 KRYFE 674
KR+F+
Sbjct: 896 KRFFK 900
>gi|430814726|emb|CCJ28090.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 876
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 303/598 (50%), Gaps = 114/598 (19%)
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYV 202
+G+++L++L+ GGI+ D+MGLGKTIQ + FL + + S G +
Sbjct: 226 DGIQWLWELHCQGVGGIIADEMGLGKTIQIVGFLGGLHYSQKLS-------------GPI 272
Query: 203 LIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVE-------------- 247
LI+CP+++++ W EF +W F V I H +I K E +
Sbjct: 273 LIVCPATIMRQWVAEFHKWWPPFRVVILHTTGSALIDIKHEELEKQFEDDKFLKNTVSFK 332
Query: 248 -------------------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
LI ++ R++ L W I+DE H+++N S +
Sbjct: 333 SKVIKNIKKIIEKVKTLGHALIITYSGLRVYREYLFPNKWAYCILDEGHKIRNPDSDVSF 392
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
C ++KT +RI L+GT +QN + EL++LFD++ PG LGT F+ + P+ G A
Sbjct: 393 ICKQIKTPHRIILSGTPIQNNLEELWSLFDFIFPGHLGTLPIFQSQFAIPINIGGYANAT 452
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
++ A + L ++ YLLRR K + L K + V+FC +++ QK AYR L
Sbjct: 453 NIQVQTAYKCACVLRDLISPYLLRRMKADMAVDLP-SKSEQVLFCKLTEFQKEAYRSFLN 511
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
++ ++ E K++ L G D L++I NH +LI
Sbjct: 512 SKDMDLIL---------------EGKKQI--LYGIDI------------LRKICNHPDLI 542
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
F + D+ G D + GKM +++++ W
Sbjct: 543 -----------------YRETFLKNNDIEYG-----------DPRKSGKMLVIKEILKLW 574
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKG-YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF 587
+G + LLF+ + +MLDILEKF+ + +S+ R+DG T + RQSLVD FN+S +F
Sbjct: 575 KKQGHRTLLFAQTKQMLDILEKFIKKMDQFSYCRMDGGTSISSRQSLVDKFNNSNDIDIF 634
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L++T+ GGLG+NL ANRV+IFDP+WNP+ DLQA++R++R GQK+ VI++RL+++G++EE
Sbjct: 635 LLTTKVGGLGINLTGANRVIIFDPDWNPSTDLQARERAWRLGQKKDVIIYRLMTSGTIEE 694
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
+Y RQ++KQ L+N + ++R+F+ +L+ + +L D +D T EI
Sbjct: 695 KIYHRQIFKQFLTNKILKDPKQRRFFKAT--------DLYDLFSLKSDDTDGTETGEI 744
>gi|448113515|ref|XP_004202370.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359465359|emb|CCE89064.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1117
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 306/597 (51%), Gaps = 122/597 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A +
Sbjct: 308 RLPGDIYPSLFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFIAGLHY------ 361
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDMIL---- 238
S +L+D VLI+ P++V+ W EF RW SI G N+ ++
Sbjct: 362 SKLLEDP-------VLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNKALVSKEEK 414
Query: 239 ----------------------EKLEACGV--------EVLITSFDSYRIHGSILSEVNW 268
+L+A + +LIT++ RI+ + W
Sbjct: 415 MEELLENADPFAVNKSSLKSYENELKAKEIVDSVFQKGHILITTYVGLRIYSKYILPRKW 474
Query: 269 EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTR 328
I+DE H+++N S + + C ++KT NR+ L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 475 GYAILDEGHKIRNPDSDVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPGRLGTL 534
Query: 329 EHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKED 388
F++ + P+ G A ++ + L ++ YLLRR K + + + K +
Sbjct: 535 PVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSD-VARDLPKKNE 593
Query: 389 NVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPF 448
V+F +++ Q++ Y + + ++ ++ G +
Sbjct: 594 MVLFVKLTEYQQQLYEKFIDSEDVSAILKGKRNVLMGVDI-------------------- 633
Query: 449 CLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
L++I NH +LI D D++ + +N ++
Sbjct: 634 ---------LRKICNHPDLI------------------------DRDILS-HRRNYNY-- 657
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL------------IRKG 556
D + GK++ L+ L+ W +G + LLF + +MLDILEKF+ I
Sbjct: 658 -GDPRKSGKLQVLKNLLQLWKKEGHRTLLFCQTRQMLDILEKFVGNLKSINDEGDDIDGK 716
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
+++ R+DGSTP +RQSLVD FN++ VFL++T+ GGLG+NL A+RV+I+DP+WNP+
Sbjct: 717 FNYLRMDGSTPIAVRQSLVDTFNNNNYCHVFLLTTKVGGLGINLTGADRVIIYDPDWNPS 776
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
D+QA++R++R GQK+ + ++RL++AGS+EE +Y RQ++K L+N + ++R+F
Sbjct: 777 TDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFF 833
>gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 224/708 (31%), Positives = 345/708 (48%), Gaps = 114/708 (16%)
Query: 63 LPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLV-LSKD 121
+ Q+ P+TR+ + V K + KE E + +L D G + V + +
Sbjct: 1 MEQKTPKTRKRSSKVHKI-----QPKEHPTEDVQDAEEKLMSLALDKDGDGDEFVDVCQS 55
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLY-KNKHGGILGDDMGLGKTIQTIAFLAAVF 180
G + + ++ +L EHQ+EGV FLY LY K + GGIL DDMGLGKTIQ IAFL+ +F
Sbjct: 56 G----LMICRELHDKLFEHQKEGVAFLYNLYHKKRQGGILADDMGLGKTIQIIAFLSGMF 111
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDM 236
D+ +++ VL+I P +++ NW EF+ W V ++HG + R+
Sbjct: 112 ------DAGLVRS--------VLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQ 157
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACL 291
LE+++ VL+TS+ + LS ++ W VI+DEAH++K+ +K +
Sbjct: 158 NLEQIQR-RTGVLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVY 216
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPER 350
+ NRI LTGT +QN + EL+ LFD+ GS LGT + F+ Y+ P+ + A
Sbjct: 217 GIPAVNRILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLG 276
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETI------GHLMMGKE---------------DN 389
+ + Q+L+A+++ Y LRR+K E + + G+E D
Sbjct: 277 EKALGLKISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDF 336
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
+V+ ++ +Q+ YR L L I K+L + SPL ++ K+L CD
Sbjct: 337 IVWVYLAPMQEDIYRNFLSLDHI-----KELLMTTRSPLAELTVLKKL-----CDH---- 382
Query: 450 LVLPCLVKLQQISN-HLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
P L+ Q +N LE+ + EP Q ++ DI V
Sbjct: 383 ---PRLLSAQACANLGLEV---SEYSEPTDQ------STLSMTQDIKRVSDKLL------ 424
Query: 509 LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TP 567
++ GK+ L L+ +G + L+FS S +MLDI+E L ++ + R+DG+ T
Sbjct: 425 ---IEESGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMRVDGTVTC 481
Query: 568 SNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
R+ V F S VFL++T+ GG+GL L SA RVVIFDP+WNPA D QA DR++R
Sbjct: 482 LAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTSATRVVIFDPSWNPATDAQAVDRAYR 541
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGEL 686
GQK +V+++RL++ G++EE +Y RQV+K L + K RYF Q+ +E
Sbjct: 542 IGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQSTGDKKNPYRYFTQ-QELRE----- 595
Query: 687 FGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E S Q Q Q H L+ HI
Sbjct: 596 -------------LFTLEDTTSSATQLQLQSLHATQRNSDLELDEHIA 630
>gi|350398865|ref|XP_003485330.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
impatiens]
Length = 1162
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 301/557 (54%), Gaps = 55/557 (9%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
++++P SI +L ++Q+ V++L++L+ GG+LGD+MGLGKT+Q IAFLA + +
Sbjct: 317 LLKIPQSIWKKLYKYQKVSVQWLWELHLRGLGGLLGDEMGLGKTVQVIAFLAGLDCSELL 376
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-----GPNRDMILE 239
SD + G +IICP+++++ W F W V++ H N + ++
Sbjct: 377 SDG-----GRFRGLGPTIIICPATLMEQWVKHFHEWWPILRVAVLHQCGTYNGNLEYLMH 431
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L++ GV LITS+ IH +L W VI+DE H+++N ++K+ A E T +R+
Sbjct: 432 SLKSGGV--LITSYSGMLIHKDLLVTSQWHYVILDEGHKIRNPQAKISKAVKEFSTPHRL 489
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A IA +
Sbjct: 490 LLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAAPITRGGYTNASPLQEAIALQVA 549
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + Y+LRRTK + HL + K + V+FC+++ QK Y+ L+ ++ +++
Sbjct: 550 TMLRDTITPYMLRRTKNDVQHHLSLPEKNEQVLFCSLTGEQKELYKEYLRSADVSFILH- 608
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL-IKPNPRDEPD 477
+ ++ + +L L L++I NH +L + NP D +
Sbjct: 609 -------------------EKINSVNRRYRARLLIALSVLRKICNHPDLFLYTNPVDSDE 649
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
DID+ NE+ K GKM + L+ W +G ++LL
Sbjct: 650 ---------------DIDV-----SNEALEKFGYWKRSGKMIVVRSLLKIWKKQGHRVLL 689
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
F+ +M+ +LE + + YS+ R+DG T + RQ + FN PS VFL++TR GGLG
Sbjct: 690 FTQGRQMMHVLESLVQSEEYSYLRMDGITSMSQRQETIRLFNKDPSYFVFLLTTRVGGLG 749
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL ANRVVI+DP+WNPA D QA+ R++R GQ + V ++RL++AG++EE +Y RQ++K
Sbjct: 750 VNLTGANRVVIYDPDWNPATDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKI 809
Query: 658 QLSNIAVSGKLEKRYFE 674
L+N + + R F+
Sbjct: 810 LLANKVLEDPRQHRLFK 826
>gi|410988871|ref|XP_004000700.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Felis catus]
Length = 1241
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 318/636 (50%), Gaps = 99/636 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+T++
Sbjct: 92 LHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DATLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP+++ L V
Sbjct: 146 --------NHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGPSKNERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K+ +K + + TRNRI LTG
Sbjct: 198 IITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKSSSTKSAICARAIPTRNRILLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATQGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKEE---------------------TIGHL--MMGKEDNVVFCTMSDLQ 399
+ +++ Y LRRTKEE I + + K D +++ ++ LQ
Sbjct: 318 MTIIKPYFLRRTKEEVQKKKSSNPEVRLREKNLDVDAICEMPSLSRKNDFIIWIRLAPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S CL+L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARACLLLNLGSVKF 432
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+ E + D+ D+ D +A + GKM
Sbjct: 433 SVPGENEGEDSSDVDQIDQITDDTLMAES---------------------------GKML 465
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L +L+ +G + L+FS S ++L+I+E L + + R+DG+ + R+ ++ F
Sbjct: 466 FLIELLERLRDEGHQTLVFSQSRQILNIIECLLKNRHFKILRIDGTITHLVEREKRINLF 525
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 526 QQNKDYSVFLLTTQIGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 585
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 586 LITCGTVEEKIYRRQVFKDSLIRQTTGDKNPFRYFTK-QELRE----------------- 627
Query: 699 NLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 628 -LFTIEDFQNSATQLQLQSLHAAQRRSDKKLDEHIA 662
>gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
Length = 1067
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/593 (30%), Positives = 301/593 (50%), Gaps = 117/593 (19%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A +
Sbjct: 270 KLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQVISFVAGLH------- 322
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDMIL--EK 240
+DK VL++ P++V+ W EF RW SI G + + EK
Sbjct: 323 ----YSGLLDKP--VLVVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMGKSAVRSEEK 376
Query: 241 LEAC--------------GV-----------------EVLITSFDSYRIHGSILSEVNWE 269
LE G+ VL+T++ RI+ + W
Sbjct: 377 LEEFLENSDPTQSKNSLRGINSQINAKEIVDRVMEKGHVLVTTYVGLRIYSKHILPREWG 436
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
V++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD+V PG LGT
Sbjct: 437 YVVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLP 496
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
F++ + P+ G A ++ + L ++ YLLRR K + + + K +
Sbjct: 497 VFQQQFSIPINMGGYANASNIQVQTGYKCAVILRDLISPYLLRRLKSD-VAQDLPKKNEM 555
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
V+F ++ +Q+ Y + L E+ ++ R + L G D
Sbjct: 556 VLFVKLTQVQQELYEKFLHSEELSSILKG-----------------RRNVLMGVDI---- 594
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
L++I NH +L+ + + +K+ + V
Sbjct: 595 --------LRKICNHPDLVNRDILE----HKKNYNYGNPV-------------------- 622
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI--------RKGYSFSR 561
GKM+ L+ L+ W S+ K LLF + +MLDILEKF+ + +++ R
Sbjct: 623 ----KSGKMQVLKNLLQLWQSQEHKTLLFCQTRQMLDILEKFVANLRLLDIDHEYFTYLR 678
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
+DGSTP RQ LVD FNS P+ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+QA
Sbjct: 679 MDGSTPIAKRQDLVDKFNSDPNLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQA 738
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R++R GQK+ + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 739 RERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 791
>gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 220/707 (31%), Positives = 341/707 (48%), Gaps = 112/707 (15%)
Query: 63 LPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLV-LSKD 121
+ Q+ P+TR+ + V K + KE E + +L D G + V + +
Sbjct: 1 MEQKTPKTRKRSSKVHKI-----QPKEHPTEDVQDAEEKLMSLALDKDGDGDEFVDVCQS 55
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLY-KNKHGGILGDDMGLGKTIQTIAFLAAVF 180
G + + ++ +L EHQ+EGV FLY LY K + GGIL DDMGLGKTIQ IAFL+ +F
Sbjct: 56 G----LMICRELHDKLFEHQKEGVAFLYNLYHKKRQGGILADDMGLGKTIQIIAFLSGMF 111
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDM 236
D+ +++ VL+I P +++ NW EF+ W V ++HG + R+
Sbjct: 112 ------DAGLVRS--------VLLIMPVTLVNNWMREFANWVPGIRVKVFHGTSKKEREQ 157
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACL 291
LE+++ VL+TS+ + LS ++ W VI+DEAH++K+ +K +
Sbjct: 158 NLEQIQR-RTGVLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVY 216
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPER 350
+ NRI LTGT +QN + EL+ LFD+ GS LGT + F+ Y+ P+ + A
Sbjct: 217 GIPAVNRILLTGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLG 276
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETI------GHLMMGKE---------------DN 389
+ + Q+L+A+++ Y LRR+K E + + G+E D
Sbjct: 277 EKALGLKISQNLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDF 336
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
+V+ ++ +Q+ YR L L I K+L + SPL ++ K+L CD
Sbjct: 337 IVWVYLAPMQEDIYRNFLSLDHI-----KELLMTTRSPLAELTVLKKL-----CDHPRLL 386
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
C ++S + E P D+ ++ DI V
Sbjct: 387 SAQACASLGLEVSEYSE-----PTDQ----------STLSMTQDIKRVSDKLL------- 424
Query: 510 SDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPS 568
++ GK+ L L+ +G + L+FS S +MLDI+E L ++ + R+DG+ T
Sbjct: 425 --IEESGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMRVDGTVTCL 482
Query: 569 NLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
R+ V F S VFL++T+ GG+GL L SA RVVIFDP+WNPA D QA DR++R
Sbjct: 483 AEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTSATRVVIFDPSWNPATDAQAVDRAYRI 542
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELF 687
GQK +V+++RL++ G++EE +Y RQV+K L + K RYF Q+ +E
Sbjct: 543 GQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQSTGDKKNPYRYFTQ-QELRE------ 595
Query: 688 GICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E S Q Q Q H L+ HI
Sbjct: 596 ------------LFTLEDTTSSATQLQLQSLHATQRNSDLELDEHIA 630
>gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1240
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 320/638 (50%), Gaps = 102/638 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+T++
Sbjct: 92 LHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DATLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------SHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + + RNRI LTG
Sbjct: 198 IITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKEE------TIGHLMMG-----------------KEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE + + +G K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKL 458
+ YR+ + L I K+L SPL ++ K+L CD C L+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACHLLNL 427
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+ ++ + E AS D+D + + + ++ GKM
Sbjct: 428 GSVKFSVQ------------GANEGEDAS-----DVDHI------DQITDDTLMEESGKM 464
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDD 577
L +L+ +G + L+FS S ++L+I+E L + + R+DG+ + R+ ++
Sbjct: 465 IFLIELLKRLRDEGHQTLVFSQSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINL 524
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
F + VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+
Sbjct: 525 FQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVY 584
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDL 696
RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 585 RLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTK-QELRE--------------- 628
Query: 697 SDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 ---LFTIEDFQNSATQLQLQSLHAAQRRSDKTLDEHIA 663
>gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca]
Length = 1218
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 320/638 (50%), Gaps = 102/638 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+T++
Sbjct: 72 LHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DATLV 125
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 126 --------SHVLLIMPTNLISTWIKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGV 177
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + + RNRI LTG
Sbjct: 178 IITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTG 237
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 238 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 297
Query: 363 VAVLRKYLLRRTKEE------TIGHLMMG-----------------KEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE + + +G K D +++ + LQ
Sbjct: 298 MAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 357
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKL 458
+ YR+ + L I K+L SPL ++ K+L CD C L+ L
Sbjct: 358 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACHLLNL 407
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+ ++ + E AS D+D + + + ++ GKM
Sbjct: 408 GSVKFSVQ------------GANEGEDAS-----DVDHI------DQITDDTLMEESGKM 444
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDD 577
L +L+ +G + L+FS S ++L+I+E L + + R+DG+ + R+ ++
Sbjct: 445 IFLIELLKRLRDEGHQTLVFSQSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINL 504
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
F + VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+
Sbjct: 505 FQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVY 564
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDL 696
RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 565 RLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTK-QELRE--------------- 608
Query: 697 SDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 609 ---LFTIEDFQNSATQLQLQSLHAAQRRSDKTLDEHIA 643
>gi|335306182|ref|XP_003360412.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1247
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 324/637 (50%), Gaps = 100/637 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEYQKEGVAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+S+I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNLSRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + + RNRI LTG
Sbjct: 198 IITTYQMLINNWQQLSSLNGREFVWDYVILDEAHKIKTSSTKSAICARAIPARNRILLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKEE---------------------TIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEEVQKKKSSNPEVRLSEEDPDADAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L CD C
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARAC----- 422
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
Q+ N L ++ + +DE + E +S V ID V +E+ + + GKM
Sbjct: 423 QLLN-LGAVRFSVQDE-----IEGEDSSGV--DHIDQVS----DETLM-----EESGKMT 465
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+ILE+ L + + R+DG+ + R+ + F
Sbjct: 466 FLMDLLKRLRDEGHQTLVFSQSRQILNILERLLKNRHFKILRIDGTITHLVEREKRISLF 525
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 526 QQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 585
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 586 LITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE---------------- 628
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 --LFTIEDFQNSATQLQLQSLHASQRRSDKNLDEHIA 663
>gi|340905413|gb|EGS17781.1| putative DNA repair and recombination protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1159
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 268/528 (50%), Gaps = 107/528 (20%)
Query: 168 KTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNV 226
KT+Q I+F+AA+ K+ K V+++ P++V++ W EF RW V
Sbjct: 402 KTVQLISFVAALH-----------YSKKLTKP--VIVVAPATVLRQWVNEFHRWWPPLRV 448
Query: 227 SIYHGPNRDM--------------------------------ILEKLEACGVEVLITSFD 254
SI H M I++++ G VL+T++
Sbjct: 449 SILHSSGSGMFNVRDEGEIEELVEDWNEEKKKPTRSNKAAKQIVDRVVKHG-HVLVTTYA 507
Query: 255 SYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELY 314
+ +G IL V W ++DE H+++N + + + C EL+T NRI L+GT MQN + EL+
Sbjct: 508 GLQTYGDILIPVEWGYAVLDEGHKIRNPNAAITIYCKELRTPNRIILSGTPMQNNLTELW 567
Query: 315 NLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRT 374
+LFD+V P LGT FR ++ P++ G A + A + + L + YLL+R
Sbjct: 568 SLFDFVYPMRLGTLVTFRAQFEIPIRLGGYANATNLQVMTAQKCAETLKEAISPYLLQRL 627
Query: 375 KEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
K + L K + V+FC +S Q++AY L+ PE+ ++N+
Sbjct: 628 KVDVAADLPK-KREQVIFCKLSPEQRQAYELFLKSPEMAAILNRTR-------------- 672
Query: 435 KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
+L G D L++I NH +L+ P +++P+ +
Sbjct: 673 ---QSLYGIDI------------LRKICNHPDLVDPKLKNKPNYK--------------- 702
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL-I 553
V+ GKM ++ L+ W G K LLF +MLDI+E F+
Sbjct: 703 --------------WGSVEKSGKMAVVQSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVKT 748
Query: 554 RKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNW 613
G + R+DG TP LRQ+LVD FN+ P VFL++T+ GGLG+NL ANRV+I+DP+W
Sbjct: 749 LDGIKYLRMDGKTPIKLRQTLVDQFNTDPDLDVFLLTTKVGGLGVNLTGANRVIIYDPDW 808
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
NP+ D+QA++R++R GQKR V ++RL++AG++EE +Y RQ++KQ LSN
Sbjct: 809 NPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLSN 856
>gi|432950140|ref|XP_004084404.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1121
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 315/641 (49%), Gaps = 115/641 (17%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L +QREGV FLY LY++ + GGIL DDMGLGKTIQ I+FL+ ++
Sbjct: 136 LHDKLYGYQREGVSFLYGLYRDGRKGGILADDMGLGKTIQVISFLSGMY----------- 184
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPN---RDMILEKLEACGVE 247
DN++ K + L+I P+S+I NW EFSRW+ V +HG + R LEK++
Sbjct: 185 -DNELIK--HTLLIMPTSLITNWIKEFSRWTPGMRVKEFHGASKAERTRSLEKVQRRS-G 240
Query: 248 VLITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
V+IT+++ + LS E W+ VI+DEAH++KN SK + + ++NR+ LT
Sbjct: 241 VVITTYNMLLNNWQQLSSYQGKEFCWDYVILDEAHKIKNTSSKTAKSAYAIPSKNRVLLT 300
Query: 303 GTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
GT +QN + E++ LFD+ G+ LGT + F+ Y+ P+ + A + +
Sbjct: 301 GTPVQNNLREMWALFDFACQGTLLGTGKTFKTEYENPITRAREKDATPGEKALGSRMSDN 360
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKE--------------------------DNVVFCTM 395
L+A+++ Y LRRTK E + + KE D +V+ +
Sbjct: 361 LMAIIKPYFLRRTKAEVQRNELCEKEKLHSSAENQEDQPDPAAAMPQLKRKNDLIVWTYL 420
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
S +Q+ YR+ + L C+ K+L + SPL ++ K+L CD P L L
Sbjct: 421 SAVQEEIYRQFIDL---DCI--KELLLTTRSPLAELTVLKKL-----CDH-PRLLSTDAL 469
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
+L N + D PD + +
Sbjct: 470 ARLGLEENAADAAAHGIADVPDH-------------------------------TLISES 498
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSL 574
GK+ L L+ +G + L+F++ ++LDI+E+ L +G+ RLDG+ T R+ L
Sbjct: 499 GKLAFLVALLERLREEGQRTLIFAHYRKVLDIIERILNNRGFKVLRLDGTITQITERERL 558
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+ F S VFL++T+ GG+G+ L +ANRVVI+DP+WNPA D QA DR++R GQ +V
Sbjct: 559 ISLFQKDRSYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENV 618
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLF 693
+++RL++ G++EE +Y RQV+K L K RYF Q+ KE
Sbjct: 619 VIYRLITCGTVEEKIYRRQVFKDSLIRQNTGDKKNPFRYFSK-QELKE------------ 665
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E S Q Q Q H Q L+ HI
Sbjct: 666 ------LFTLEDTRSSSTQLQLQALHSRHRQTDPQLDQHIA 700
>gi|351705605|gb|EHB08524.1| DNA excision repair protein ERCC-6-like protein [Heterocephalus
glaber]
Length = 1181
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 316/634 (49%), Gaps = 101/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LYK+K GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 39 QLFEHQKEGVAFLYSLYKDKRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 89
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+ L+I P+++I W EFS+W+ V +HGP++D L V+IT
Sbjct: 90 -----NHALLIMPTNLISMWVKEFSKWTPGMRVKTFHGPSKDERTRSLNRVQQRNGVVIT 144
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 145 TYQMLINNWQQLSSCNGQVFVWDYVILDEAHKIKSSSTKSAICARAIPASNRLLLTGTPI 204
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 205 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGEKALGLKISENLMEI 264
Query: 366 LRKYLLRRTKEE---TIGHL--------------------MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE T ++ + K D +++ + LQ+
Sbjct: 265 IKPYFLRRTKEEVQKTKSNIPEVRPTEKNSGVDAICEMPSLSRKNDLIIWIRLVPLQEEI 324
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C +L
Sbjct: 325 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSTRVCHLL---------- 369
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
HL K + +D ++ D + + V + ++ GKM L
Sbjct: 370 -HLGTAKISGQDGNEEDSSDVDAIAHVTDDTL-----------------MEESGKMIFLI 411
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L K + R+DG+ L R+ ++ F +
Sbjct: 412 DLLKRLRDEGHQTLVFSQSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQN 471
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 472 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 531
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 532 CGTVEEKIYRRQVFKGSLIRQTTGDKKNPYRYFNK-QELRE------------------L 572
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + K L+ HI
Sbjct: 573 FTVEDLQNSATQLQLQSLHAAQRRSDKTLDEHIT 606
>gi|291235335|ref|XP_002737602.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saccoglossus
kowalevskii]
Length = 2298
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 299/584 (51%), Gaps = 91/584 (15%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L +QRE + + + L+K K GGILGDDMGLGKTIQ IAFL+ +F
Sbjct: 98 KLYPYQRESILWFWGLHKKKSGGILGDDMGLGKTIQVIAFLSGLF--------------D 143
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPN---RDMILEKLEACGVEVLIT 251
++ +LI+ P+++I NWE EF +W+ V YHG N R+ L K++ G +L T
Sbjct: 144 AERVKSILIVLPATLIINWEREFDKWAPGIRVLTYHGSNKRERERALSKVQRRGGALLST 203
Query: 252 SFDSYRIHGSILSEVN----------WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
Y I + EV W+ VI+DE H++KN+ +K A + + RI L
Sbjct: 204 ----YGIISNNWQEVATNDRDGRDFVWDYVILDEGHKIKNKSNKSSKAVHAIPAKRRIIL 259
Query: 302 TGTIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL+ LFD+V G L GT + F Y+ P+ ++ A +R+ E +
Sbjct: 260 TGTPIQNNLKELWALFDFVTQGQLLGTLKTFCLEYEGPIVRARQKDARPSEMRLGTEMAE 319
Query: 361 HLVAVLRKYLLRRTKEETIG------------HLMMG----------------KEDNVVF 392
+L ++ Y RRTK ET+ M G K D +++
Sbjct: 320 NLRQIIEPYFKRRTKAETLEKNKENQTKDDTREEMDGNTTASSTSTPTPSLTRKNDLILW 379
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
+S +Q++ Y+ ++ PE++ L+ + SPL + K++ CD
Sbjct: 380 VFLSKVQQKIYQDFVETPEVRQLL-----MTTRSPLAMLTMLKKI-----CDHPRLLNKR 429
Query: 453 PC-LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
C ++ L+ +E D ++ AS + + N N S L
Sbjct: 430 ACGMLNLEG-------------EECDPYGDYSDTASQISSSE--CAADNIDNVSISAL-- 472
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS-NL 570
V+ GK+ L L+ + +G + L+FS S +MLDI++K L K + R+DGS
Sbjct: 473 VEESGKLVVLISLLENLRDEGHRTLVFSQSKKMLDIMQKVLEEKNFKLIRIDGSIRKLED 532
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
R+ L++ F + S VFL++T GG+GL L +A+RVVIFDP+WNPA D QA DR++R GQ
Sbjct: 533 REKLINKFQRNSSYSVFLLTTGVGGIGLTLTAADRVVIFDPSWNPATDSQAVDRAYRLGQ 592
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
K+ V+++RL++ GS+EE +Y RQ++K ++ A S K RYF
Sbjct: 593 KKTVVIYRLITCGSVEEKIYRRQIFKDSITKQATGSSKDPYRYF 636
>gi|407832863|gb|EKF98624.1| DNA excision repair protein, putative,SNF2 family helicase-like
protein, putative [Trypanosoma cruzi]
Length = 1114
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 306/583 (52%), Gaps = 62/583 (10%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P I + A+I RLLEHQR+G+K+L +L+ + GGILGD+MGLGKTIQ + L A+ +
Sbjct: 402 PGISLLANIYNRLLEHQRDGIKWLLRLHTQRMGGILGDEMGLGKTIQVASMLNALHHSQQ 461
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH-----GPNRDMIL 238
D LI+ P +V++ W E RW+ + + H +R+ ++
Sbjct: 462 LRDP-------------CLIVSPLTVLRQWVAEMHRWAPYIRTCVMHESSATNMSREKLI 508
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + + VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +R
Sbjct: 509 QSIRSTPA-VLLTTYAAVRQHCHLLHTARFQYVILDEGHKISNPEATVTLAAKSFPTPHR 567
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + EL+ LFD+V PG LGT F E ++EP+ + + A + A E
Sbjct: 568 LILSGTPIQNTLKELWCLFDFVRPGLLGTMTKFVEEFEEPINASKDVRASPLALATAVEC 627
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L + YLLRR K + + + K + V+ C +SD Q AY LL +Q L++
Sbjct: 628 AQALRERIAPYLLRRLKRQVMSDALPQKYERVIRCPLSDDQLEAYVELLTSSRVQRLLSS 687
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCP---FCL------------VLPCLVKLQQISN 463
L S + + C R + +GC F L L +L+QI N
Sbjct: 688 TLTSS--QLMGGLNCEGR--DANGCLHIAGRRFQLFQRQYHGGIRLEAFRVLNELRQICN 743
Query: 464 HLELI------KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS------- 510
H+++ K N + D +D + D V G + +S
Sbjct: 744 HVDIFRLRRAAKKNGAEYFDNDEED----------ETDGVDGKTKRRRGSHMSLRSNRLV 793
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
+ GK++ L+KL+ W G ++L+FS + LDI+E ++G+ + R+DGST +
Sbjct: 794 NYSGSGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHH 853
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ L+D FN S L++TR GG+G+NLV ANRVV+FDP+WNP D QA++R++R GQ
Sbjct: 854 RQELMDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAWRIGQ 913
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
R V V+RL+++G++EE + RQ+ K ++ + +R+F
Sbjct: 914 TRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLHNPALQRFF 956
>gi|363732948|ref|XP_420137.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Gallus gallus]
Length = 1280
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 332/665 (49%), Gaps = 128/665 (19%)
Query: 133 INCRLLEHQREGVKFLYKLYK-NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L +HQREGV FLY+L++ + GGIL DDMGLGKTIQ IAFL+ +F DS ++
Sbjct: 88 MHAKLFQHQREGVAFLYRLHREGRPGGILADDMGLGKTIQIIAFLSGMF------DSELI 141
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+ +VL+I P++++ +W EF+RW+ V +HG ++ LE + +
Sbjct: 142 R--------HVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLEKIQRKNGI 193
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+ITS+ + L+ + W+ +I+DEAH++K +K + ++R+ LTG
Sbjct: 194 VITSYQMLINNWKQLASCHGQDFVWDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLTG 253
Query: 304 TIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + E+++LFD+ GSL GT + FR Y+ P+ + A + + ++L
Sbjct: 254 TPLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKALGLKISENL 313
Query: 363 VAVLRKYLLRRTKEET----------------------IGHLMMGKEDNVVFCTMSDLQK 400
+ +++ Y LRRTK++ + + K D VV+ ++ +Q+
Sbjct: 314 MTIIKPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPSLTRKNDFVVWVYLAPVQE 373
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
+ YR L L + K++ + SPL ++ K+L CD C
Sbjct: 374 KIYRNFLCLDHV-----KEVLTTTRSPLAELTVLKKL-----CDHPRLLSARAC------ 417
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD---VKSCGK 517
L+L D + +D E +AV L G N + LSD ++ GK
Sbjct: 418 --TQLDL------DGQEYLEQDHESEAAV------LSGANKIDH----LSDETLIQESGK 459
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVD 576
M L L+ +G + L+FS S +MLDI+E+ L + + R+DG+ T R+ ++
Sbjct: 460 MLFLVGLLGRLREEGHRTLVFSQSRKMLDIIERVLSSRQFKIMRIDGTVTHLTEREKRIN 519
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
F S+ VFL++T+ GG+G+ L +ANRVVIFDP+WNPA D QA DR++R GQK +V++
Sbjct: 520 AFQSNKDYSVFLLTTQVGGVGITLTAANRVVIFDPSWNPATDAQAVDRAYRIGQKENVVI 579
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFE--------GVQDCK------E 681
+RL++ G++EE +Y RQV+K L K RYF ++D + +
Sbjct: 580 YRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFTLEDTRTSTTQIQ 639
Query: 682 FQG----------------------ELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERH 719
Q E+FGI + D +FT E+ +HEEQ + +E H
Sbjct: 640 LQSLHATQRQTDVQLDEHIAYLHSLEMFGISD-----HDLIFTREV--THEEQAESEEAH 692
Query: 720 HCTNQ 724
Q
Sbjct: 693 QYIQQ 697
>gi|71409960|ref|XP_807298.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener]
gi|70871269|gb|EAN85447.1| DNA excision repair protein, putative [Trypanosoma cruzi]
Length = 1114
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 306/583 (52%), Gaps = 62/583 (10%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P I + A+I RLLEHQR+G+K+L +L+ + GGILGD+MGLGKTIQ + L A+ +
Sbjct: 402 PGISLLANIYNRLLEHQRDGIKWLLRLHTQRMGGILGDEMGLGKTIQVASMLNALHHSQQ 461
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH-----GPNRDMIL 238
D LI+ P +V++ W E RW+ + + H +R+ ++
Sbjct: 462 LRDP-------------CLIVSPLTVLRQWVAEMHRWAPYIRTCVMHESSATNMSREKLI 508
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + + VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +R
Sbjct: 509 QSIRSTPA-VLLTTYAAVRQHCHLLHTARFQYVILDEGHKISNPEATVTLAAKSFPTPHR 567
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + EL+ LFD+V PG LGT F E ++EP+ + + A + A E
Sbjct: 568 LILSGTPIQNTLKELWCLFDFVRPGLLGTMTKFVEEFEEPINASKDVRASPLALATAVEC 627
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L + YLLRR K + + + K + V+ C +SD Q AY LL +Q L++
Sbjct: 628 AQALRERIAPYLLRRLKRQVMSDTLPQKYERVIRCPLSDDQLEAYVELLTSSRVQRLLSS 687
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCP---FCL------------VLPCLVKLQQISN 463
L S + + C R + +GC F L L +L+QI N
Sbjct: 688 TLTSS--QLMGGLNCDGR--DANGCLHIAGRRFQLFQRQYHGGIRLEAFRVLNELRQICN 743
Query: 464 HLELI------KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS------- 510
H+++ K N + D +D + D V G + +S
Sbjct: 744 HVDIFRLRRAAKENGAEYFDDNEED----------ETDGVDGKTKRRRGSHMSLRSNRLV 793
Query: 511 DVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
+ GK++ L+KL+ W G ++L+FS + LDI+E ++G+ + R+DGST +
Sbjct: 794 NYSGSGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHH 853
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
RQ L+D FN S L++TR GG+G+NLV ANRVV+FDP+WNP D QA++R++R GQ
Sbjct: 854 RQELMDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAWRIGQ 913
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
R V V+RL+++G++EE + RQ+ K ++ + +R+F
Sbjct: 914 TRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLHNPALQRFF 956
>gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 711
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 293/535 (54%), Gaps = 61/535 (11%)
Query: 148 LYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICP 207
++KL++ + GGI+GD+MGLGKT+Q +F+ + + S LK VLII P
Sbjct: 1 MWKLHQEEAGGIIGDEMGLGKTVQASSFIGVL------AASRKLKS--------VLIISP 46
Query: 208 SSVIQNWEIEFSRWS-TFNVSIYHGPNRDM-ILEKLEACGVE-VLITSFDSYRIHGSILS 264
++++Q+W E + W+ + H D+ L CG V++T++++ R + I +
Sbjct: 47 ATMLQHWLNELAVWAPGLRRILIHQSGEDLETLPSHSFCGTGYVVLTTYENVRRNTDIYT 106
Query: 265 EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS 324
E W V++DEA +++N + + +AC ++T +R+ ++GT +QN + EL++LFD+V PG
Sbjct: 107 EHAWSYVVLDEAQKIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGR 166
Query: 325 LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIG-HLM 383
LGT F + + + +K G A +++A L ++ YLLRR K++ I M
Sbjct: 167 LGTLPAFEQEFADTIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKKDVIEVSRM 226
Query: 384 MGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGC 443
GK ++V+FC +S Q+ Y L E+ + V+ K+L
Sbjct: 227 PGKTEHVLFCRLSQRQRALYEAFLLSDEVTKV---------------VKGSKQL------ 265
Query: 444 DSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDID---LVGGN 500
+ L++I NH P+ +PD +A S V ++ L
Sbjct: 266 --------FAAVTMLRKICNH-----PDLACDPD----EASFESFVRNGYVNQGDLDEDL 308
Query: 501 AQNESFIG--LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYS 558
+ +S IG S V+ GK+ L K++ W +G ++L+F +MLDI+E+ ++ K +
Sbjct: 309 SDLDSDIGEEKSLVERSGKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEWK 368
Query: 559 FSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQD 618
F RLDG+T RQ LVD FNS S L +TR GG+GLNL ANR++++DP+WNP D
Sbjct: 369 FGRLDGNTNVASRQRLVDQFNSDESYFGMLCTTRTGGVGLNLTGANRIILYDPDWNPQTD 428
Query: 619 LQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
QA++R++RFGQ+R V V+RL++AG++EE +Y RQ++K LSN + ++R F
Sbjct: 429 AQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRRLF 483
>gi|348536122|ref|XP_003455546.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oreochromis
niloticus]
Length = 1270
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 297/566 (52%), Gaps = 91/566 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L ++QR+GV FLY LY++ + GGIL DDMGLGKTIQ I+FL+ ++ DN
Sbjct: 107 KLYDYQRDGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMY------------DN 154
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACGVEVLI 250
++ K + L+I P+S+I NW EFS+W+ V +HG + R LEK++ G V+I
Sbjct: 155 ELAK--HTLLIMPTSLITNWTKEFSKWTPGMRVKEFHGISKGERTRNLEKVQRRGG-VII 211
Query: 251 TSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ + LS E W+ +I+DEAH++K+ +K + + ++NR+ LTGT
Sbjct: 212 TTYTMLLNNWQQLSTHNGKEFTWDYMILDEAHKIKSTTTKTAKSAYAIPSKNRVLLTGTP 271
Query: 306 MQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E++ LFD+ G+L GT + F+ Y+ + + A + ++L+A
Sbjct: 272 VQNNLREMWALFDFACQGTLLGTAKTFKAEYENSITRAREKDATPGEKALGSRMSENLMA 331
Query: 365 VLRKYLLRRTKEETIG----------HL--------------------MMGKEDNVVFCT 394
+++ Y LRRTK E HL + K D +V+
Sbjct: 332 IIKPYFLRRTKSEVQKNKTNRTHNKEHLEDKEDHVPNLEADSGAVMPKLTRKNDLIVWTY 391
Query: 395 MSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC 454
+S +Q+ YR+ + L I ++L + SPL ++ K+L CD P L
Sbjct: 392 LSAIQEDIYRQFISLDHI-----RELLLTTRSPLAELNILKKL-----CDH-PRLLSAAA 440
Query: 455 LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS 514
+ KL LE ++ D + D + S PD L+
Sbjct: 441 IAKLG-----LEESAAECQETTDTEPSDHSITSV---PDDTLIS---------------E 477
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQS 573
GKM L L+ +G + L+F++ ++LDI+E+ L +G+ RLDG+ T R+
Sbjct: 478 SGKMVFLFSLLERLRQEGHRTLVFAHYRKVLDIIERILSNRGFKVLRLDGTITQITERER 537
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
L+ F + VFL++T+ GG+G+ L +ANRVVI+DP+WNPA D QA DR++R GQ +
Sbjct: 538 LISLFQTDKRYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTEN 597
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQL 659
V+++RL++ G++EE +Y RQV+K L
Sbjct: 598 VVIYRLITCGTVEEKIYRRQVFKDSL 623
>gi|431914423|gb|ELK15680.1| DNA excision repair protein ERCC-6-like protein [Pteropus alecto]
Length = 1265
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 306/594 (51%), Gaps = 90/594 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 121 LHDQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 174
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+S+I W EF +W+ V +HGP++D L V
Sbjct: 175 N--------HVLLIMPTSLISTWVKEFDKWTPGMRVKTFHGPSKDERTRNLRRIQHRNGV 226
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS ++ W+ VI+DEAH++K +K + + NRI LTG
Sbjct: 227 IITTYQMLINNWQQLSSLDGQEFVWDYVILDEAHKIKTSSTKSALCARAVPASNRILLTG 286
Query: 304 TIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GSL GT + F+ Y+ P+ + A + + ++L
Sbjct: 287 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGLKISENL 346
Query: 363 VAVLRKYLLRRTKEETIGHL-----------------------MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE + K D +++ + LQ
Sbjct: 347 MAIIKPYFLRRTKEEVQKKQPGDPEVRLSEKNPGVDATNEMPSLSRKNDLIIWIRLVPLQ 406
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKL 458
+ YR+ + L I K+L SPL ++ K+L CD C L+ L
Sbjct: 407 EEIYRKFVSLDHI-----KELLMETRSPLAELGILKKL-----CDHPRLLSARACHLLNL 456
Query: 459 QQISNHLELIKPNPRDE-PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
+ ++ +E DE DK+ D + S V D+ L+ K GK
Sbjct: 457 EDVTFPVE-------DEGEDKEASDVDHISQVT--DVTLM---------------KESGK 492
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVD 576
M L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ + R+ ++
Sbjct: 493 MIFLMDLLERLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRIDGTITHLVEREKRIN 552
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
F + VFLI+T+ GG+GL L +A RVVIFDP+WNPA D QA DR+ R GQ+ +V+V
Sbjct: 553 LFQQNKDYSVFLITTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRAHRIGQRENVVV 612
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGI 689
+RL++ G++EE +Y RQV+K L K RYF K+ ELF I
Sbjct: 613 YRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYF-----SKQELRELFAI 661
>gi|449547038|gb|EMD38006.1| DNA repair protein SNF2 family [Ceriporiopsis subvermispora B]
Length = 814
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 303/574 (52%), Gaps = 77/574 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLYK + N++G I+ D+MGLGKT+Q IA +
Sbjct: 208 KVPVVIDPRLSKVLRPHQVEGVKFLYKCTTGMMVDNQYGCIMADEMGLGKTLQCIALMWT 267
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + +S TI K +I CP+S+++NW E ++W + ++I
Sbjct: 268 LLKQSPHASRPTIDK---------CIIACPASLVKNWANELAKWLGKDTISALAIDGKGG 318
Query: 234 RDMILEKLE----ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ +LE++ A G V +I S+++ R + L +++ DE HRLKN +S+
Sbjct: 319 KAEMLERVARWVAASGRNVSQPVMIVSYETLRTLAAHLQNCPIGLLLCDEGHRLKNSESQ 378
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ EL + R+ L+GT +QN + E ++L ++ P LG++ FR+ ++ + G+
Sbjct: 379 TFQVLNELNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDA 438
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
A + D++ + L ++ K+++RRT + +L + K + VVFC +S LQ YR
Sbjct: 439 DASDAIKAACDKKLKELGDLVTKFIIRRTNDLLSKYLPV-KYEQVVFCGLSPLQLSLYRL 497
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ PEIQ L L G DS P L + L+++ NH
Sbjct: 498 FISSPEIQAL------------------------LRGTDSQP----LKAINILKKLCNHP 529
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC---GKMRALE 522
EL+ D P R +L + +G A + G + V C GK LE
Sbjct: 530 ELL-----DLPGDLRGSDKLLPEEY------IGAGANAKGRGGRNQVVHCEWSGKFVVLE 578
Query: 523 KLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+ ++ ++ DKI+L S + LD+ EK L KGY + RLDG+ N RQ LVD FN+
Sbjct: 579 RFLHRIRTETNDKIVLISNYTQTLDLFEKLLRTKGYGYFRLDGTMTINKRQKLVDQFNNP 638
Query: 582 PSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
K+ +FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +
Sbjct: 639 EGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFI 698
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
+ G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 699 TTGTIEEKIFQRQASKQSLSSAVVDEKEDVERHF 732
>gi|340712112|ref|XP_003394608.1| PREDICTED: DNA excision repair protein ERCC-6-like [Bombus
terrestris]
Length = 1161
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/557 (33%), Positives = 300/557 (53%), Gaps = 55/557 (9%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ ++P SI +L ++Q+ V++L++L+ GG+LGD+MGLGKT+Q IAFLA + +
Sbjct: 317 LFKIPQSIWKKLYKYQKVSVQWLWELHLRGLGGLLGDEMGLGKTVQVIAFLAGLDCSELL 376
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH-----GPNRDMILE 239
SD + G +I+CP+++++ W F W V++ H N + ++
Sbjct: 377 SDGGRFRG-----LGPTIIVCPATLMEQWVKHFHEWWPILRVAVLHQCGTYNGNLEYLMH 431
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L++ GV LITS+ IH ++L W VI+DE H+++N ++K+ A E T +R+
Sbjct: 432 SLKSGGV--LITSYSGMLIHKNLLVTSQWHYVILDEGHKIRNPQAKISKAVKEFSTPHRL 489
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTG+ MQN + EL++LFD++ PG LGT F E P+ G A IA +
Sbjct: 490 LLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCATPITRGGYTNASPLQEAIALQVA 549
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L + Y+LRRTK + HL + K + V+FC++++ QK Y+ L+ ++ +++
Sbjct: 550 TMLRDTITPYMLRRTKNDVQHHLSLPEKNEQVLFCSLTEEQKELYKEYLRSADVSFILH- 608
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL-IKPNPRDEPD 477
+ + +L L L++I NH +L + NP D +
Sbjct: 609 -------------------EKSNSVSRRYRARLLIALSVLRKICNHPDLFLYTNPVDSDE 649
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
DID+ NE+ K GKM + L+ W +G ++LL
Sbjct: 650 ---------------DIDV-----SNEALEKFGYWKRSGKMIVVRSLLKIWKKQGHRVLL 689
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
F+ +M+ +LE + + YS+ R+DG T + RQ + FN PS VFL++TR GGLG
Sbjct: 690 FTQGRQMMHVLESLVQSEEYSYLRMDGITSMSQRQETIRLFNKDPSYFVFLLTTRVGGLG 749
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL ANRVVI+DP+WNPA D QA+ R++R GQ + V ++RL++AG++EE +Y RQ++K
Sbjct: 750 VNLTGANRVVIYDPDWNPATDAQARARAWRIGQNKKVTIYRLITAGTIEEKMYHRQIFKI 809
Query: 658 QLSNIAVSGKLEKRYFE 674
L+N + + R F+
Sbjct: 810 LLANKVLEDPRQHRLFK 826
>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
saltator]
Length = 679
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 288/548 (52%), Gaps = 64/548 (11%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ K +G I+ D+MGLGKT+Q I L + + +
Sbjct: 83 CNVLRPHQREGVKFMYECVTGKRIEDAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 142
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS---IYHGPNRDMILEKLE--- 242
I K +I+ PSS+++NW E +W VS I G +D+ + +
Sbjct: 143 LIDK---------AIIVAPSSLVKNWYNEIYKWLNNRVSALAIDGGKKKDIDTKLISFMK 193
Query: 243 ----ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y + + LK + R
Sbjct: 194 TYNGRCVYPILIISYETFRLHAHVLHQNEVGLVLCDEGHRLKNSENQTYQSLMGLKAKRR 253
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT + FR ++ P+ GQ A + ++A+ER
Sbjct: 254 VLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFETPILRGQDAEATDEERKLAEER 313
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
LV+V+ K L+RRT +L + K + VV M +LQ R Y+ + I+
Sbjct: 314 LSDLVSVVNKCLIRRTSALLSKYLPL-KHELVVCIKMGELQTRLYKSFIHSDSIK----- 367
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
K +++ D L + L+++ NH +LI ++ D
Sbjct: 368 ----------------KSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLIYDKIKERSDG 411
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILL 537
A L A + + E LS GK+ L+ L+ S + DKI+L
Sbjct: 412 FENAARLLPANY----------STKELLPDLS-----GKLMVLDCLLASIKTTTNDKIVL 456
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGL 596
S + LD+ EK ++GY++ RLDG+ R +VD+FNS S S +F++S++AGG
Sbjct: 457 VSNYTQTLDLFEKLCHKRGYNYVRLDGTMTIKKRSKVVDNFNSESSSDFIFMLSSKAGGC 516
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R LS G++EE ++ RQ +K
Sbjct: 517 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHK 576
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 577 KALSSTVV 584
>gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus
(Silurana) tropicalis]
Length = 1361
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 303/580 (52%), Gaps = 88/580 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LY++ + GGIL DDMGLGKTIQ I FL+ +F DS ++K
Sbjct: 106 KLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVIGFLSGMF------DSELIK-- 157
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPN---RDMILEKLEACGVEVLI 250
YVL++ P+++I NW EF +W+ V+ +HG + R LEK++ ++I
Sbjct: 158 ------YVLLVMPTTLISNWVKEFQKWTPGLRVAEFHGTSKKERTRNLEKIQRMS-GIII 210
Query: 251 TSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ + L+ N W+ +I+DEAH++K +K +C + +NRI LTGT
Sbjct: 211 TTYQMLINNWQQLATYNGREFEWDYIILDEAHKIKTSSTKTAKSCHSIPAKNRILLTGTP 270
Query: 306 MQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E++ L+D+ G+ LGT + F+ Y+ P+ + A + + ++L+
Sbjct: 271 IQNNLREMWALYDFACQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKISENLMK 330
Query: 365 VLRKYLLRRTKEETIGH-----------------LMMGKEDNVVFCTMSDLQKRAYRRLL 407
+++ Y LRRTK + + K D +V+ +S +Q+ YR+ +
Sbjct: 331 IIQPYFLRRTKSDVQNKKTERTRAQDTSQGPSMPSLTRKNDFIVWVYLSTIQEDVYRKFI 390
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL-VKLQQISNHLE 466
L +I K+L + SPL ++ K+L CD C+ + L+ H
Sbjct: 391 SLDQI-----KELLMTTRSPLAELNILKKL-----CDHPRLLSARACIQLGLEGDDYH-- 438
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD---VKSCGKMRALEK 523
+ D EL + F LSD ++ GK+ L
Sbjct: 439 ----------SNEEGDHELVT-----------------KFDHLSDEILIEESGKLLLLID 471
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L++ +G + L+FS S +MLD++++ L K + R+DG+ R+ + F S+ +
Sbjct: 472 LLHKLKEEGHRTLVFSQSRKMLDMIDRILQNKNFKVMRIDGTVALPEREKRISIFQSNNN 531
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
V L++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR++R GQ+ +V+++RL++ G
Sbjct: 532 YSVLLLTTQVGGVGLTLTAADRVVIFDPSWNPATDAQAVDRAYRIGQQENVVIYRLITCG 591
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEF 682
++EE +Y RQ++K+ L K RYF Q+ KE
Sbjct: 592 TVEEKIYRRQIFKESLIRQTTGDKKNPFRYF-SKQELKEL 630
>gi|71410996|ref|XP_807766.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener]
gi|70871837|gb|EAN85915.1| DNA excision repair protein, putative [Trypanosoma cruzi]
Length = 1118
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 305/580 (52%), Gaps = 53/580 (9%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
+P I + A+I RLLEHQR+G+K+L +L+ + GGILGD+MGLGKTIQ + L A+
Sbjct: 404 FPGISLLANIYNRLLEHQRDGIKWLLRLHTQRMGGILGDEMGLGKTIQVASMLNALHHSQ 463
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH-----GPNRDMI 237
+ D LI+ P +V++ W E RW+ + + H +R+ +
Sbjct: 464 QLRDP-------------CLIVSPLTVLRQWVAEMHRWAPYIRTCVMHESSATNMSREKL 510
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
++ + + VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +
Sbjct: 511 IQSIRSTPA-VLLTTYAAVRQHCHLLHTARFQYVILDEGHKISNPEATVTLAAKSFPTPH 569
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ L+GT +QN + EL+ LFD+V PG LGT F E ++EP+ + + A + A E
Sbjct: 570 RLILSGTPIQNTLKELWCLFDFVRPGLLGTMTKFVEEFEEPINASKDVRASPLALATAVE 629
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
Q L + YLLRR K + + + K + V+ C +SD Q AY LL +Q L++
Sbjct: 630 CAQALRERIAPYLLRRLKRQVMSDALPQKYERVIRCPLSDDQLEAYVELLTSSRVQRLLS 689
Query: 418 KDLPCSCGSP--LTQVECCKRLDNLDGC---DSCPFCL------------VLPCLVKLQQ 460
L SP + + C R + +GC F L L +L+Q
Sbjct: 690 STLT----SPQLMGGLNCDGR--DANGCLHIAGIRFQLFQRQYHGGIRLEAFRVLNELRQ 743
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS-------DVK 513
I NH+++ + K+ + D V G + +S +
Sbjct: 744 ICNHVDIFRLR---RAAKENGAEYFDDDEEEDETDGVDGKKKRRRGSHMSLRSNRLVNYS 800
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
GK++ L+KL+ W G ++L+FS + LDI+E ++G+ + R+DGST + RQ
Sbjct: 801 GSGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQE 860
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
L+D FN S L++TR GG+G+NLV ANRVV+FDP+WNP D QA++R++R GQ R
Sbjct: 861 LMDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAWRIGQTRD 920
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
V V+RL+++G++EE + RQ+ K ++ + +R+F
Sbjct: 921 VGVYRLIASGTVEEAILRRQLAKTYVTEKVLHNPALQRFF 960
>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
echinatior]
Length = 681
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 287/548 (52%), Gaps = 65/548 (11%)
Query: 135 CRLLE-HQREGVKFLY-----KLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y K +N +G I+ D+MGLGKT+Q I L + + +
Sbjct: 86 CNVLRPHQREGVKFMYECVTGKRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 145
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDM------ILE 239
I K +I+ PSS+++NW E ++W ++I G D+ ++
Sbjct: 146 LIEK---------AVIVAPSSLVKNWYNEINKWLNNMVNTLAIDGGKKADIDTQLIRFMK 196
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y + + LK + R+
Sbjct: 197 TYGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSENQTYQSLMGLKAKRRV 256
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN ++E ++L +V G LGT + FR Y+ P+ GQ A + +A ER
Sbjct: 257 LLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDAERTVAQERL 316
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ-CLINK 418
LV+++ K L+RRT +L + K + VV M +LQ + Y+ +Q I+ +
Sbjct: 317 SDLVSIVNKCLIRRTSALLSKYLPL-KHELVVCIKMGELQTQLYKNFIQSDSIKRSMEEN 375
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D P GS L + L+++ NH +LI +++ D
Sbjct: 376 DNPKKTGS----------------------LSALAAITLLKKLCNHPDLIYDKIKEKADG 413
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILL 537
K A L + + E LS GK+ L+ L+ S + DKI+L
Sbjct: 414 LEKAASLLPPNY----------SAKELMPELS-----GKLMVLDCLLASIKTTTNDKIVL 458
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK ++ Y++ RLDG+ R +VD+FNS S +F++S++AGG
Sbjct: 459 VSNYTQTLDLFEKLCHKRSYNYVRLDGTMTIKKRAKVVDNFNSDSSNDFIFMLSSKAGGC 518
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R LS G++EE ++ RQ +K
Sbjct: 519 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHK 578
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 579 KALSSTVV 586
>gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
Length = 1157
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 294/599 (49%), Gaps = 122/599 (20%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+FLA +
Sbjct: 350 FKLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFLAGLHY----- 404
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYH------GPNRDMILE 239
S +L+ VL++ P++V+ W EF RW I H G N E
Sbjct: 405 -SGLLEKP-------VLVVVPATVMNQWVNEFHRWWPPLRCVILHSIGSGMGKNAIHSEE 456
Query: 240 KLEAC---------------GV-----------------EVLITSFDSYRIHGSILSEVN 267
K+EA G+ VL+T++ RI+ +
Sbjct: 457 KIEAFLETTDPSSVKNDSFKGINSHMRAKEIIDTVMEKGHVLVTTYVGLRIYSKFILPRQ 516
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W V++DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD++ PG LGT
Sbjct: 517 WGYVVLDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLGT 576
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F + + P+ G A ++ + L ++ YLLRR K + + + K
Sbjct: 577 LPVFEQQFSVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSD-VAQDLPKKN 635
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+F ++ Q+ Y + L ++ ++ G +
Sbjct: 636 EMVLFVKLTQYQQDLYEKFLSSEDLHAILKGKRNILMGVDI------------------- 676
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH +L+ D E+ Q
Sbjct: 677 ----------LRKICNHPDLV-------------DREIL---------------QRRKNY 698
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL------------IRK 555
+ GK++ L+ L+ W +G + LLF + +MLDILEKF+ +R
Sbjct: 699 NYGNPAKSGKLQVLKNLLQLWQMQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEVRG 758
Query: 556 GYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNP 615
+++ R+DGST RQ+LVD FN VFL++T+ GGLG+NL A+RV+I+DP+WNP
Sbjct: 759 TFNYLRMDGSTNIGRRQALVDTFNEDKQYHVFLLTTKVGGLGINLTGADRVIIYDPDWNP 818
Query: 616 AQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+ D+QA++R++R GQK+ + ++RL++AGS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 819 STDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 877
>gi|395519787|ref|XP_003764023.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1197
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 210/659 (31%), Positives = 328/659 (49%), Gaps = 98/659 (14%)
Query: 118 LSKDGEYPIIQVPAS-------INCRLLEHQREGVKFLYKLYKNKH-GGILGDDMGLGKT 169
LS +GE + V S ++ RL EHQ+EGV FLY LYK + GGIL DDMGLGKT
Sbjct: 74 LSIEGEDEFVDVCNSGLMLYRDLHDRLFEHQKEGVAFLYSLYKERRKGGILADDMGLGKT 133
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSI 228
+Q +AFL+A+F D+ +++ +VL+I P+S+I W EF +W+ V+
Sbjct: 134 VQILAFLSAMF------DAELVR--------FVLLIMPTSLISTWTKEFDKWTPGMRVAT 179
Query: 229 YHGPNRDMILEKLEACGVE--VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKN 281
+HG +++ + L V IT++ + LS+++ W+ +I+DEAH++K+
Sbjct: 180 FHGSSKNERIRNLNRIQRNNGVAITTYQMLVNNWQQLSQLDGKEFVWDYLILDEAHKIKS 239
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLK 340
+K +A + +NRI LTGT +QN + EL++LFD+ GSL GT + F+ Y+ P+
Sbjct: 240 SSTKSSIAARAIPVKNRILLTGTPIQNNLYELWSLFDFACQGSLLGTSKTFKIEYENPIT 299
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH------------------- 381
+ A + + ++L+A+++ Y LRRTKE+
Sbjct: 300 RAREKDATPGEKVLGLKISENLMALIKPYFLRRTKEDIQKKSTNKPLRNLPEKNLDDDII 359
Query: 382 ----LMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
+ K + +++ + LQ+ YR+ L L I K L SPL ++ K+L
Sbjct: 360 YEIPFLSRKNELIIWVYLVPLQEEIYRKFLSLNHI-----KQLLMETHSPLAELTVLKKL 414
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLV 497
CD C + L L + N E + Q +
Sbjct: 415 -----CDHPRLLSARACSL--------LGLKEGNFSGEDESQ----------------MA 445
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
N Q + S ++ GK+ L L+ +G + L+FS S ++LDI+E L ++ +
Sbjct: 446 HSNIQIDQVPHESLMQESGKVIFLMALLKRLQDEGHQTLVFSQSRKLLDIIEHLLKKENF 505
Query: 558 SFSRLDGS-TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
R+DG+ T + RQ +D F S VFL++++ GGLGL L SA RV+IFDP+WNPA
Sbjct: 506 KTLRIDGTVTHLSERQRRIDLFQQSQDVSVFLLTSQVGGLGLTLTSATRVIIFDPSWNPA 565
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL-SNIAVSGKLEKRYFEG 675
D QA DR +R GQK +V+V+RL+S G++EE +Y RQV+K L K RYF
Sbjct: 566 TDAQAVDRVYRIGQKENVVVYRLISCGTVEEKIYRRQVFKDSLIRQTTGDQKNPARYF-- 623
Query: 676 VQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERH--HCTNQGFKGLETH 732
K+ ELF I + FR + L + H + ++ E H + G G+ H
Sbjct: 624 ---SKQELRELFTIGD-FRSSATQLQLHSLHAGHRKTDKKLEEHIAYLHTLGIAGISDH 678
>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
floridanus]
Length = 682
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 290/550 (52%), Gaps = 64/550 (11%)
Query: 133 INCRLLE-HQREGVKFLY-----KLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I C +L HQREGVKF+Y K +N +G I+ D+MGLGKT+Q I L + + +
Sbjct: 84 ILCNVLRPHQREGVKFMYECVTGKRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEA 143
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKL--- 241
I K +I+ PSS+++NW E ++W + N G + I KL
Sbjct: 144 KPLIDK---------AIIVAPSSLVKNWYNEINKWLNNIVNTLAIDGGKKAEIDTKLLRF 194
Query: 242 -----EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y + + LK +
Sbjct: 195 MKTYGGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSENQTYQSLMGLKAK 254
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN ++E ++L +V G LGT + FR Y+ P+ GQ A + ++A
Sbjct: 255 RRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQDAAATDDQRKLAQ 314
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
ER LV+V+ K L+RRT +L + K + VV M +LQ R Y+ +Q I+ +
Sbjct: 315 ERLSDLVSVVNKCLIRRTSALLSKYLPL-KHEFVVCIKMGELQTRLYKNFIQSESIKRSM 373
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+D G L+ L + L+++ NH +LI ++
Sbjct: 374 EEDDNPKKGGHLS---------------------ALAAITLLKKLCNHPDLIYDKIMEKS 412
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKI 535
+ K A+L + + + + LS GK+ L+ L+ S + DKI
Sbjct: 413 EGFEKAAQLLPSHY----------STKQLLPELS-----GKLMVLDCLLASIKTTTNDKI 457
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK ++ Y++ RLDGS R +V++FNS S +F++S++AG
Sbjct: 458 VLVSNYTQTLDLFEKLCNKRSYNYVRLDGSMTIKKRSKVVENFNSDTSSDFIFMLSSKAG 517
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R LS G++EE ++ RQ
Sbjct: 518 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFVYRFLSTGTIEEKIFQRQA 577
Query: 655 YKQQLSNIAV 664
+K+ LS+ V
Sbjct: 578 HKKALSSTVV 587
>gi|344303600|gb|EGW33849.1| hypothetical protein SPAPADRAFT_133417 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1042
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 186/595 (31%), Positives = 302/595 (50%), Gaps = 119/595 (20%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ V++L++LY K GGI+GD+MGLGKTIQ I+F+A +
Sbjct: 262 KLPGDIYPSLFDYQKTCVQWLWELYSQKTGGIIGDEMGLGKTIQIISFIAGLH------- 314
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIYHGPNRDMILEKLE 242
+DK VL++ P++V+ W EF +W SI G + EKLE
Sbjct: 315 ----YSGLLDKP--VLVVVPATVLNQWVNEFHKWWPPLRCIILHSIGSGMGEKVSEEKLE 368
Query: 243 AC--------------GVE-----------------VLITSFDSYRIHGSILSEVNWEIV 271
+ G++ VLIT++ RI+ + W V
Sbjct: 369 SFLETHDPHASTSSLRGIKSQINAQEIIDRVMEKGHVLITTYVGLRIYSKHILPREWGYV 428
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I+DE H+++N S + + C ++KT NRI L+GT +QN ++EL++LFD++ PG LGT F
Sbjct: 429 ILDEGHKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLGTLPVF 488
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
++ + P+ G A ++ + L ++ YLLRR K + + + K + V+
Sbjct: 489 QQQFSIPINMGGYANASNVQVQTGYKCAVILRDLITPYLLRRLKSD-VAQDLPKKNEMVL 547
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
F ++ +Q+ Y + L E L + KR + L G D
Sbjct: 548 FVKLTRIQQDLYEKFLHSEE----------------LNSILKGKR-NVLMGVDM------ 584
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L++I NH PD ++ + G N N +
Sbjct: 585 ------LRKICNH-----------PDLINREILMYKK---------GYNYGNPA------ 612
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-----------KGY-SF 559
GKM+ L+ L+ W S+ K LLF + +MLDILEKF+ GY ++
Sbjct: 613 --KSGKMQVLKNLLQLWQSQNHKTLLFCQTRQMLDILEKFVANLHVLDEEGNDSTGYFNY 670
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DG TP + RQ+LVD FN+ ++ VFL++T+ GGLG+NL A+RV+I+DP+WNP+ D+
Sbjct: 671 LRMDGGTPISKRQTLVDKFNTDLTQHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDI 730
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
QA++R++R GQKR + ++RL++ GS+EE +Y RQ++K L+N + ++R+F+
Sbjct: 731 QARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQRRFFK 785
>gi|148886758|ref|NP_001092144.1| DNA excision repair protein ERCC-6-like [Rattus norvegicus]
gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus
norvegicus]
Length = 1230
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 309/597 (51%), Gaps = 94/597 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYKN + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 KLFEHQKEGIAFLYSLYKNGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF++W+ V +HG +++ + L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFAKWTPGMRVKTFHGSSKNERIRNLTRIQQRNGVVIT 200
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 201 TYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAVPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGFKMSENLMEI 320
Query: 366 LRKYLLRRTKEETIGHL-------------------------MMGKEDNVVFCTMSDLQK 400
++ Y LRRTKEE H+ + K D +V+ + LQ+
Sbjct: 321 IKPYFLRRTKEEV--HMKKADKPEVRPGEKNSGVEDICEMLSLTRKNDLIVWIRLVPLQE 378
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKLQ 459
YR+ + L I K+L SPL ++ K+L CD C L+ L
Sbjct: 379 EIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACHLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
++ E DE ++Q + + S ID + NA ++ GKM
Sbjct: 429 TVTFSAE-------DE-NEQEDASNMGS------IDHLSDNAL---------MQESGKMI 465
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDD 577
L L+ +G + L+FS S ++L+I+E+ L K + R+DG T ++L R+ +
Sbjct: 466 FLMALLERLQDEGHQTLVFSQSRQILNIIERLLKNKHFKTLRIDG-TVTHLWEREKRIQL 524
Query: 578 FNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
F + VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK +V+V+
Sbjct: 525 FQQNKEYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVY 584
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLF 693
RL++ G++EE +Y RQV+K L K RYF K+ ELF + +L
Sbjct: 585 RLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYF-----TKQELKELFTVGDLL 636
>gi|338729291|ref|XP_001488364.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Equus
caballus]
Length = 1286
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 322/637 (50%), Gaps = 100/637 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 134 LHNQLFEYQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 187
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF++W+ V +HGP++D L V
Sbjct: 188 --------NHVLLIMPTNLINMWIKEFAKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 239
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + + NRI LTG
Sbjct: 240 IITTYQMLINNWQQLSSLNSQQFVWDYVILDEAHKIKTSSTKSAICARAIPASNRILLTG 299
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + FR Y+ P+ + A + + ++L
Sbjct: 300 TPIQNNLQELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKISENL 359
Query: 363 VAVLRKYLLRRTKEE---------------------TIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE I + + K D +++ + LQ
Sbjct: 360 MAIIKPYFLRRTKEEVQKKKSSNPEVRLDEKNPDADAICEMPSLSRKNDLIIWIRLVPLQ 419
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 420 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACHLL-- 467
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+L +K + +DE + E +S D+D + + + ++ GKM
Sbjct: 468 ----NLGAVKFSVQDE-----NEGEDSS-----DVDHL------DKITDDTLMEESGKMI 507
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ + R+ ++ F
Sbjct: 508 FLMDLLQRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRIDGTITHLVEREKRINLF 567
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 568 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 627
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 628 LITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE---------------- 670
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 671 --LFTIEDFQNSATQLQLQSLHAAQRRSDKKLDEHIA 705
>gi|348570656|ref|XP_003471113.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1263
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 318/634 (50%), Gaps = 101/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 120 QLFEHQKEGIAFLYSLYRDERKGGILADDMGLGKTVQIIAFLSGMF------DASLVH-- 171
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EFS+W+ V +HGP+++ L + V+IT
Sbjct: 172 ------HVLLIMPTNLISMWMKEFSKWTPGIRVKTFHGPSKNERTRSLNRVQQKNGVIIT 225
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS N W+ VI+DEAH++K+ +K + + RNR+ LTGT +
Sbjct: 226 TYQMLINNWQQLSSFNGQAFVWDYVILDEAHKIKSSSTKSAICVRAVPARNRLLLTGTPI 285
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 286 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGERALGLKISENLMEI 345
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K + +++ + LQ
Sbjct: 346 IKPYFLRRTKEVVQKKKSDISEVRYTEVNSGVDAICEMPSLSRKNELIIWIRLVPLQVEI 405
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I+ L+ + +C SPL ++ K+L CD C +
Sbjct: 406 YRKFVSLDHIKELLKE----TC-SPLAEIGVLKKL-----CDHPRLLSTRACHLL----- 450
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
HLE K + +DE K+ L DI V + E GKM L
Sbjct: 451 -HLETAKTSAQDE----NKENSLGI----DDISHVTDDTLMEE---------SGKMIFLI 492
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L K + R+DG+ L R+ ++ F +
Sbjct: 493 DLLKRLRDEGHQTLVFSQSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQN 552
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 553 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 612
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 613 CGTVEEKIYRRQVFKGSLIRQTTGDKKNPFRYFSK-QELRE------------------L 653
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
F E ++ Q Q Q H K L+ HIV
Sbjct: 654 FMIEDLQKSATQLQLQSLHAAQRSSDKTLDEHIV 687
>gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1310
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 317/637 (49%), Gaps = 106/637 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQREGV FLY LY++ K GGIL DDMGLGKTIQ IAFL+ +F ++
Sbjct: 84 KLFEHQREGVAFLYGLYRDGKKGGILADDMGLGKTIQIIAFLSGMFDEEHIKS------- 136
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHG---PNRDMILEKLEACGVEVLI 250
VL+I P+++I NW EF+ W+ V ++HG R+ LE ++ +L+
Sbjct: 137 -------VLLIVPTTLISNWTKEFASWTPGLRVKVFHGTCIAERNRNLEWIQRRH-GILL 188
Query: 251 TSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ + L+ E W+ I+DEAH++K +K + + ++NRI LTGT
Sbjct: 189 TTYQMVLNNWQQLASFGNKEFVWDYAILDEAHKIKTPSAKTTKSVHAIPSKNRILLTGTP 248
Query: 306 MQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL+ LFD+ GS LGT + FR Y+ P+ + A + + ++L++
Sbjct: 249 VQNNLKELWALFDFACQGSLLGTMKTFRMEYENPITRARAKDATPGEKALGLKISENLMS 308
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDN----------------------VVFCTMSDLQKRA 402
+++ Y LRR+K+E + + ++ N +V+ ++ +Q+
Sbjct: 309 IIKPYFLRRSKDELKKTVNLEQKSNLPALQSKDAAPPMPSLPRKNDFIVWVYLAPIQEEI 368
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L + SPL ++ K+L CD C + S
Sbjct: 369 YRKFISLDHI-----KELLMTTRSPLAELNILKKL-----CDHPRLLSARACSQLGLETS 418
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD---VKSCGKMR 519
+ +L D +A D++ N ++ LSD ++ GK+
Sbjct: 419 SCYDL---------DGDENEAN----------DVLHQNIEH-----LSDQVLIEESGKLL 454
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDF 578
L L+ +G + L+FS S +MLDI+E+ L R+ + R+DG+ T R+ + F
Sbjct: 455 FLVALLDRLQEEGHRTLVFSQSRKMLDIIERILTRRRFKLMRIDGTVTHLTEREKRIGMF 514
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR++R GQK +V+++R
Sbjct: 515 QKNSEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKANVVIYR 574
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L + K RYF Q+ +E
Sbjct: 575 LITCGTVEEKIYRRQVFKDSLIRQSTGEKKNPYRYFSN-QELRE---------------- 617
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E S Q Q Q H + L+ HI
Sbjct: 618 --LFTLEDPRSSSTQLQLQSLHSSQRKTDTQLDEHIA 652
>gi|385302379|gb|EIF46512.1| chromatin remodelling complex atpase chain isw1 [Dekkera
bruxellensis AWRI1499]
Length = 1053
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/550 (33%), Positives = 283/550 (51%), Gaps = 95/550 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF---GK 182
+ + P+ I+ L ++Q G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + G
Sbjct: 122 LTESPSYIHGTLRDYQIAGLNWLISLYENRLSGILADEMGLGKTLQTISFLGWLRYYRGI 181
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMIL 238
D G LII P S + NW EF++W+ NV + G D+I
Sbjct: 182 D----------------GPFLIIVPKSTLDNWRREFNKWTPDVNVLVLQGNKEEREDLIK 225
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+KL C + +TS++ S L + WE +I+DEAHR+KNE+S L +RNR
Sbjct: 226 DKLMQCNFDACVTSYEMVIREKSKLGKFRWEYIIIDEAHRIKNEQSSLSQIIRVFYSRNR 285
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P G + F E+++ + Q D+
Sbjct: 286 LLITGTPLQNNLHELWALLNFLLPDVFGDDQLFDEWFESEGQTNQ------------DDL 333
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L +L +LLRR K + L+ KE N V+ M+ +Q + YR+LL+ K
Sbjct: 334 VKQLHKILSPFLLRRVKSDVETSLLPKKELN-VYVGMTAMQIKWYRKLLE---------K 383
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDE 475
D+ G L + E RL N+ +++L++ NH E +P P
Sbjct: 384 DIDAVNGV-LGKREGKTRLLNI--------------MMQLRKCCNHPYLFEGAEPGPPYT 428
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
D+ V + GKM L+KL+ S+G ++
Sbjct: 429 TDEHL-------------------------------VYNSGKMIVLDKLLKKMKSEGSRV 457
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAG 594
L+FS R+LDILE + +GY++ R+DGSTP R +DD+NS S K +FL++TRAG
Sbjct: 458 LIFSQMSRLLDILEDYCYFRGYNYCRIDGSTPHEERIKAIDDYNSPNSDKFIFLLTTRAG 517
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE V R
Sbjct: 518 GLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTENAIEEKVLERAT 577
Query: 655 YKQQLSNIAV 664
K +L + +
Sbjct: 578 QKLRLDQLVI 587
>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
Length = 791
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 284/544 (52%), Gaps = 64/544 (11%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ K G I+ D+MGLGKT+Q I L + + TI K
Sbjct: 140 LRPHQREGVRFMYECVTGKRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTINK 199
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEAC------ 244
+I+CPSS+++NW EF +W N G +++ ++LE
Sbjct: 200 ---------AVIVCPSSLVKNWYKEFGKWLGCRVNCLAIDGGSKEHTTKELEQFMANQSM 250
Query: 245 --GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VLI S++++R++ IL+ V+ DE HRLKN ++ Y A + LKT+ R+ L+
Sbjct: 251 RHGTPVLIISYETFRLYSHILNNSEVGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLS 310
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E Y+L +V PG LG+ FR ++ P+ GQ A E + A ER Q L
Sbjct: 311 GTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFENPILRGQDANATESERQKATERLQEL 370
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
A + + ++RRT +L + K + VV M+++Q Y+ LQ I+
Sbjct: 371 TAQVNRCMIRRTSALLTKYLPI-KFEMVVCVKMTEIQTELYKSFLQSDSIR--------- 420
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
S L + + L L + L+++ NH +L+ E ++R D
Sbjct: 421 --RSMLEKAQVKASLTALSN------------ITSLKKLCNHPDLVY-----EKIQERAD 461
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYS 541
F ++ N ++ + GK+ L+ ++ S + DKI+L S
Sbjct: 462 G------FENAHKILPSNYSSKEL----RPEFGGKLMVLDCMLASIKMNTDDKIVLVSNY 511
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ LD+ EK ++GY + RLDGS R +VD+FN SK+ +F++S++AGG GLNL
Sbjct: 512 TQTLDLFEKLCRKRGYCYVRLDGSMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNL 571
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ G++EE ++ RQ +K+ LS
Sbjct: 572 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALS 631
Query: 661 NIAV 664
N V
Sbjct: 632 NTVV 635
>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 787
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 282/544 (51%), Gaps = 64/544 (11%)
Query: 137 LLEHQREGVKFLYKLYKNK----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ K G I+ D+MGLGKT+Q I L + + I K
Sbjct: 139 LRPHQREGVRFMYECVTGKRGDFQGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPEINK 198
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEAC------ 244
+I+CPSS+++NW EF +W N G +++ ++LE
Sbjct: 199 ---------AVIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKQLEQFMANQSA 249
Query: 245 --GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VLI S++++R++ IL+ V+ DE HRLKN ++ Y A + LKT+ R+ L+
Sbjct: 250 RQGTPVLIISYETFRLYAGILNNSEVGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLS 309
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E Y+L +V PG LG+ FR ++ P+ GQ + E A ER Q L
Sbjct: 310 GTPIQNDLTEYYSLLHFVNPGMLGSSNEFRRQFENPILRGQDANSTESEREKATERLQEL 369
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
A++ + ++RRT +L + K + VV M+D+Q Y+ LQ I+
Sbjct: 370 SALVNRCMIRRTSSLLTKYLPI-KFEMVVCVKMTDVQTELYKSFLQSDSIR--------- 419
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
S L + E L L + L+++ NH +L+ E K+R +
Sbjct: 420 --RSVLEKSEVKASLTALSN------------ITALKKLCNHPDLVY-----EKIKERAE 460
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYS 541
F ++ N + + GK+ L+ ++ S + DKI+L S
Sbjct: 461 G------FEEAYKILPANYSAKEV----RPEFGGKLMVLDCMLASIKMNTNDKIVLVSNY 510
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ LD+ EK ++GY + RLDG+ R +VD+FN SK+ +F++S++AGG GLNL
Sbjct: 511 TQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNL 570
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ GS+EE ++ RQ +K+ LS
Sbjct: 571 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALS 630
Query: 661 NIAV 664
N V
Sbjct: 631 NTVV 634
>gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2
[Macaca mulatta]
Length = 1252
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 318/634 (50%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY+LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 431
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + N + ++ GKM L
Sbjct: 432 A-----------QDGNEGEDS--------PDVDHIDQITDN------TLMEESGKMIFLM 466
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 467 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQN 526
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK++V+V+RL++
Sbjct: 527 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLIT 586
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 587 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 627
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 628 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 661
>gi|402910520|ref|XP_003917922.1| PREDICTED: DNA excision repair protein ERCC-6-like [Papio anubis]
Length = 1256
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 318/634 (50%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY+LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 99 QLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 149
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 150 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 204
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 205 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 264
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 265 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 324
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 325 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 384
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 385 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 435
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + N + ++ GKM L
Sbjct: 436 A-----------QDGNEGEDS--------PDVDHIDQITDN------TLMEESGKMIFLM 470
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 471 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQN 530
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK++V+V+RL++
Sbjct: 531 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLIT 590
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 591 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 631
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 632 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 665
>gi|383419435|gb|AFH32931.1| DNA excision repair protein ERCC-6-like [Macaca mulatta]
Length = 1252
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 318/634 (50%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY+LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 431
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + N + ++ GKM L
Sbjct: 432 A-----------QDGNEGEDS--------PDVDHIDQITDN------TLMEESGKMIFLM 466
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 467 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQN 526
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK++V+V+RL++
Sbjct: 527 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLIT 586
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 587 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 627
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 628 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 661
>gi|355757463|gb|EHH60988.1| DNA excision repair protein ERCC-6-like protein [Macaca
fascicularis]
Length = 1252
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 318/634 (50%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY+LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 431
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + N + ++ GKM L
Sbjct: 432 A-----------QDGNEGEDS--------PDVDHIDQITDN------TLMEESGKMIFLM 466
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 467 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQN 526
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK++V+V+RL++
Sbjct: 527 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLIT 586
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 587 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 627
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 628 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 661
>gi|395862525|ref|XP_003803497.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1252
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 317/634 (50%), Gaps = 100/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV F Y LY++ + GGIL DDMGLGKTIQ IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGVAFFYSLYRDGRKGGILADDMGLGKTIQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS N W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ ++ A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C Q+
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARAC-----QLL 425
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
N L +K + D + + PD+D + +E+ + + GKM L
Sbjct: 426 N-LGTVKFSALDGNEGED----------FPDMDHI-DQITDETLM-----EESGKMIFLM 468
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E L + + R+DG+ L R+ ++ F +
Sbjct: 469 DLLKRLRDEGHQTLVFSQSRQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKN 528
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 529 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 588
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 589 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 629
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + K L+ HI
Sbjct: 630 FTIEDLQNSVTQLQLQSLHAAQRRSDKKLDEHIA 663
>gi|395855223|ref|XP_003800069.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1253
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 317/634 (50%), Gaps = 100/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIIPTNLINTWVKEFVEWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS N W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ ++ A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C Q+
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARAC-----QLL 425
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
N L +K + D + + PD+D + +E+ + + GKM L
Sbjct: 426 N-LGTVKFSALDGNEGED----------FPDMDHI-DQITDETLM-----EESGKMIFLM 468
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E L + + R+DG+ L R+ ++ F +
Sbjct: 469 DLLKRLRDEGHQTLVFSQSRQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKN 528
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 529 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 588
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 589 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 629
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + K L+ HI
Sbjct: 630 FTIEDLQNSVTQLQLQSLHAAQRRSDKKLDEHIA 663
>gi|407860358|gb|EKG07368.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1044
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 286/563 (50%), Gaps = 84/563 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQR GV+FL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 358 IGDKLRPHQRAGVQFLFDCITGERMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGV 417
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDMILEKLE 242
T K L++ PSS+++NW EF +W Y P D I+ + +
Sbjct: 418 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFD 468
Query: 243 ACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G +VL+ S+D R + + +S + + E+V+ DE HRLKN + K A L TRNRI L
Sbjct: 469 GEG-DVLVISYDQLRKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIIL 527
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE + +R +
Sbjct: 528 SGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHY 587
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++++LRRT+ +L K D VF + +LQ AY +L L E
Sbjct: 588 LSNLTQRFILRRTQSINESYLPP-KVDVTVFVRLGELQSVAYEKLSDLVE---------- 636
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
SCP +++ L KL NH++L
Sbjct: 637 ---------------------SSSCPPLVLISALRKL---CNHMDL-------------- 658
Query: 482 DAELASAVFGPDIDLVG-GNAQNESFI------GLSDVKSCGKMRALEKLMYSWASKG-- 532
AV + VG G +S + G + GKM + ++ + G
Sbjct: 659 ---FYEAVLNSSKEEVGEGRGIPKSVLPKGYKSGTLSEAAGGKMHFVSLMLDELRNNGDR 715
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIST 591
DK+++ S + LD++ +K SF +LDGS P RQ +VD FN S++ VFL+S+
Sbjct: 716 DKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLLSS 775
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGG+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLSAGS+EE +Y
Sbjct: 776 KAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKIYQ 835
Query: 652 RQVYKQQLSNIAVSGKLE-KRYF 673
RQV KQ LS V K + K++F
Sbjct: 836 RQVSKQGLSANVVDMKSDSKQHF 858
>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum
PHI26]
gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
Length = 862
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 290/575 (50%), Gaps = 84/575 (14%)
Query: 128 QVPASINCRLLE----HQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ KN +G I+ D MGLGKT+Q I +
Sbjct: 256 KVPVVIDPRLCKVLRPHQIEGVKFLYRCVTGLVDKNANGCIMADGMGLGKTLQCITLMWT 315
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + E+ +TI K +I CPSS++ NW E +W +T +I
Sbjct: 316 LLKQSSEAGKTTIQK---------CVIACPSSLVGNWANELVKWLGKDATTPFAIDGKAT 366
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ ++ +++ + VLI S+++ R++ L++ +++ DE HRLKN++S
Sbjct: 367 KAELITQIKQWAIASGRGIVRPVLIVSYETLRMYADTLNDTPIGLLLCDEGHRLKNKESL 426
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A +L R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 427 TWTALNQLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQAEFRKRFELPILRGRDA 486
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
+ ++ DER Q L ++ K+++RRT E +L + K ++VVFC MS Q+ Y
Sbjct: 487 AGTDEEKKLGDERLQELSGIVNKFIIRRTNELLSKYLPV-KYEHVVFCNMSQFQRGLYNH 545
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRL----DNLDGCDSCPFCLVLPCLVKLQQI 461
++ PEIQ L+ PL + K+L D LD + P C
Sbjct: 546 FIKSPEIQSLLRG----KGSQPLKAIGLLKKLCNHPDLLDLANDLPGC------------ 589
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
E P PD + +D E+ S GKM L
Sbjct: 590 ----EHTFPEDYSPPDTRGRDREIKSWY-------------------------SGKMMVL 620
Query: 522 EKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS 580
++++ DKI+L S + LD+ EK +GY RLDG+ R LVD FN
Sbjct: 621 DRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNIKKRTKLVDKFND 680
Query: 581 SPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R
Sbjct: 681 PDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 740
Query: 640 LSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
++ GS+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 741 IATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 775
>gi|355704915|gb|EHH30840.1| DNA excision repair protein ERCC-6-like protein [Macaca mulatta]
Length = 1399
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 318/634 (50%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY+LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 242 QLFEHQKEGIAFLYRLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 292
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 293 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 347
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 348 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 407
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 408 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 467
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 468 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 527
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 528 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 578
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + N + ++ GKM L
Sbjct: 579 A-----------QDGNEGEDS--------PDVDHIDQITDN------TLMEESGKMIFLM 613
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 614 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQN 673
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK++V+V+RL++
Sbjct: 674 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLIT 733
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 734 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 774
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 775 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 808
>gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris
gallopavo]
Length = 1273
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 328/660 (49%), Gaps = 124/660 (18%)
Query: 136 RLLEHQREGVKFLYKLYK-NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L +HQREGV FLY+LY+ + GGIL DDMGLGKTIQ IAFL+ +F DS +++
Sbjct: 81 KLFQHQREGVAFLYRLYREGRPGGILADDMGLGKTIQIIAFLSGMF------DSELIR-- 132
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPN---RDMILEKLEACGVEVLI 250
+VL+I P+++I +W EF+RW+ V +HG + R LEK++ ++I
Sbjct: 133 ------HVLLIVPTTLISSWLAEFARWTPGLRVKEFHGTSKIERTRNLEKIQRKN-GIVI 185
Query: 251 TSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
TS+ + L+ + W+ +I+DEAH++K +K + ++R+ LTGT
Sbjct: 186 TSYQMLINNWKQLASCHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLTGTP 245
Query: 306 MQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E+++LFD+ GSL GT + FR Y+ P+ + A + + ++L+
Sbjct: 246 LQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKALGLKISENLMT 305
Query: 365 VLRKYLLRRTKEET----------------------IGHLMMGKEDNVVFCTMSDLQKRA 402
+++ Y LRRTK++ + + K D VV+ ++ +Q++
Sbjct: 306 IIKPYFLRRTKDDIKKNHTEKSDTPLPEDPHEPSAPVMPSLTRKNDFVVWVYLAPVQEKI 365
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR L L + K+L + SPL ++ K+L CD C
Sbjct: 366 YRNFLCLDHV-----KELLTTTRSPLAELTVLKKL-----CDHPRLLSARAC-------- 407
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
L+L D Q E G + ++ G + + S ++ GKM L
Sbjct: 408 TQLDL---------DGQ----EYLEQDHGSEAAVLSGANKIDHLSDESLIQESGKMLFLL 454
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDFNSS 581
L+ +G + L+FS S +MLDI+E+ L + + R+DG+ T R+ ++ F S+
Sbjct: 455 GLLERLREEGHRTLVFSQSRKMLDIIERVLSSRRFKIMRIDGTVTHLTEREKRINAFQSN 514
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+G+ L +ANRVVIFDP+WNPA D QA DR++R GQK +V+++RL++
Sbjct: 515 KDYSVFLLTTQVGGVGITLTAANRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLIT 574
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFE--------GVQDCK------EFQG-- 684
G++EE +Y RQV+K L K RYF ++D + + Q
Sbjct: 575 CGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFTLEDTRTSTTQIQLQSLH 634
Query: 685 --------------------ELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQ 724
E+FGI + D +FT E+ +HEEQ + +E H Q
Sbjct: 635 ATQRQTDVQLDEHIAYLHSLEMFGISD-----HDLIFTREV--THEEQAESEEAHQYIQQ 687
>gi|407398125|gb|EKF28002.1| DNA excision repair protein, putative,SNF2 family helicase-like
protein, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 1156
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 307/587 (52%), Gaps = 70/587 (11%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P I + A+I RLLEHQR+G+K++ +L+ + GGILGD+MGLGKTIQ + L A+ +
Sbjct: 443 PGISLAANIYNRLLEHQRDGIKWMLQLHTQRKGGILGDEMGLGKTIQVASMLNALHHSQQ 502
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH-----GPNRDMIL 238
D LI+ P +V++ W E RW+ + + H +R+ ++
Sbjct: 503 LRDP-------------CLIVSPLTVLRQWVAEMHRWAPYIRTCVMHESSATNMSREKLI 549
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + + VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +R
Sbjct: 550 QSIRSTPA-VLLTTYAAVRQHCHLLHTARFQYVILDEGHKISNPEATVTLAAKSFPTPHR 608
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + EL+ LFD+V PG LGT F E ++EP+ + + A + A E
Sbjct: 609 LILSGTPIQNTLKELWCLFDFVRPGLLGTMTRFVEEFEEPINASKDVRASPLALATAVEC 668
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L + YLLRR K + + + K + V+ C ++D Q AY LL +Q L++
Sbjct: 669 AQALRERIAPYLLRRLKRQVMSDALPQKYERVIRCPLTDEQLEAYVELLTSSRVQRLLS- 727
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP---------------------CLVK 457
S LT + L N DG D+ CL + L +
Sbjct: 728 -------STLTSSQLMGGL-NRDGRDANG-CLHIAGKRFQLFQRQHHGGIRLEAFRVLNE 778
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVF--GPDIDLVGGNAQNESFIG------- 508
L+QI NH+++ + +R E + F + + G N + + G
Sbjct: 779 LRQICNHVDIFRL--------RRAAKENGAEYFDDDEEDETDGVNGKKKRRRGSHMSLRS 830
Query: 509 --LSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
L + GK++ L+KL+ W G ++L+FS + LDI+E ++G+ + R+DGST
Sbjct: 831 NRLVNYSGSGKLQTLQKLLTVWQRGGQRVLIFSQTRMALDIIENMCEQEGFKYIRMDGST 890
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
+ RQ L+D FN L++TR GG+G+NLV ANRVV+FDP+WNP D QA++R++
Sbjct: 891 SGHHRQELMDRFNEDDGIVAALLTTRVGGVGVNLVGANRVVLFDPDWNPVTDEQARERAW 950
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
R GQ R V V+RL+++G++EE + RQ+ K ++ + +R+F
Sbjct: 951 RIGQTRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLHNPALQRFF 997
>gi|403308077|ref|XP_003944505.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saimiri
boliviensis boliviensis]
Length = 1253
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 318/634 (50%), Gaps = 101/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLRELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATAGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKEE--------------------TIGHL--MMGKEDNVVFCTMSDLQKRAY 403
++ Y LRRTKEE I + + K D +++ + LQ+ Y
Sbjct: 321 IKPYFLRRTKEEVQKKTSNPDVKLNENNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 380
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKLQQIS 462
R+ + L I K+L SPL ++ K+L CD C L+ L+ ++
Sbjct: 381 RKFVSLDHI-----KELLMETQSPLAELGVLKKL-----CDHPRLLSTRACGLLNLRTVT 430
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ RDE + + PD+ + + + + ++ GKM L
Sbjct: 431 F-------SARDENEGED----------SPDMGHIDQISDD------TLMEESGKMIFLM 467
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 468 GLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQN 527
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 528 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 587
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 588 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 628
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 629 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 662
>gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like
(ATP-dependent helicase ERCC6-like) (PLK1-interacting
checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona
intestinalis]
Length = 1159
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 296/566 (52%), Gaps = 92/566 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
RL HQ EG+K++Y L++NK GGIL DDMGLGKTIQ IA ++A+F D+ ++K
Sbjct: 101 RLYPHQIEGIKWMYDLFQNKRKGGILADDMGLGKTIQVIALISALF------DAKLIK-- 152
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGP--NRDMILEKLEACGVEVLIT 251
+VL++ P S+I NW EF+ W+ V YHGP R IL++ V IT
Sbjct: 153 ------HVLLVLPLSLIPNWTNEFANWAPGIKVEEYHGPVAKRKAILQQC-MHRRSVCIT 205
Query: 252 SF----DSYRIHGSILS--EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
++ + G L E W+ +I+DE HR+KN SK ++ +RNRI LTGT
Sbjct: 206 TYGLIVTKWETLGETLDGREFVWDYIILDEGHRIKN-ASKTTKGLHKIPSRNRIILTGTP 264
Query: 306 MQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QNK+ +++ L DWV GSL GT++ F+ Y+ P++ ++ A IR+ + + L
Sbjct: 265 VQNKVRDMWALMDWVTQGSLLGTQKTFKSSYEIPIECARQKGATSGQIRLGNMMSESLRK 324
Query: 365 VLRKYLLRRTKE-------ETIGHL--------------------MMGKEDNVVFCTMSD 397
+ ++LRRTK+ E G+L + K D VV+ +SD
Sbjct: 325 LTDPFILRRTKDGLTRNEKENRGNLACVDGAQDPTVLNKQPRFPKLSTKNDFVVWVYLSD 384
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
+Q++ Y +QL + K+L + SPL + K++ CD P L ++
Sbjct: 385 IQQQIYSDFIQLDSV-----KELLLTHRSPLVHLTVLKKI-----CDH-PRLLSTKACIE 433
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD---VKS 514
L SN S D + + G A N +SD ++
Sbjct: 434 LGLESND----------------------SMTENLDQEAIEGCAANR-INNISDQVLMEE 470
Query: 515 CGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG-STPSNLRQS 573
GK++ L L+ +G + L+FS S +ML+I+++ L+ + R+DG T + R+
Sbjct: 471 SGKLQFLIPLLLRLREEGHRTLIFSMSRKMLNIIQRILMNLKFKVMRMDGLVTKLSEREK 530
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
V F S VFL++T+ GG+GL L +A+RVVI+DP+WNPA D QA DR +R GQK+
Sbjct: 531 RVKLFQEDSSYSVFLLTTQVGGVGLTLTAADRVVIYDPSWNPATDSQAVDRIYRIGQKKS 590
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQL 659
V V+RL++ GS+EE +Y RQ++K +
Sbjct: 591 VAVYRLITCGSVEEKIYRRQIFKNSV 616
>gi|74007793|ref|XP_549075.2| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Canis lupus
familiaris]
Length = 1268
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 318/641 (49%), Gaps = 108/641 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+T++
Sbjct: 114 LHNQLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DATLV 167
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HG ++D L V
Sbjct: 168 --------SHVLLIMPTNLISTWIKEFVKWTPGMRVKTFHGSSKDERTRNLNRIQQRNGV 219
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + + RNRI LTG
Sbjct: 220 IITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRILLTG 279
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 280 TPIQNNLQELWSLFDFACQGSLLGTLKTFKIEYENPIMRAREKDATPGEKALGLKISENL 339
Query: 363 VAVLRKYLLRRTKEE---------------------TIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ + LRRTKEE I + + K D +++ + LQ
Sbjct: 340 MAIIKSHFLRRTKEEVQKKSSTPEEIRFSEKNPDGDAICKMPSLSRKNDLIIWIRLRPLQ 399
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L CD
Sbjct: 400 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CD--------------- 434
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG-LSD---VKSC 515
+PR + R L S F + G +A + I ++D ++
Sbjct: 435 -----------HPRLLSARARHLLSLGSVKFSVQGENEGEDASDVDHIDHVTDDTLMEES 483
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSL 574
GKM L +L+ +G + L+FS S ++L+I+E+ L + + R+DG+ + R+
Sbjct: 484 GKMIFLIELLRRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRVDGTVTHLVEREKR 543
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+ F + VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK ++
Sbjct: 544 IHLFQQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENI 603
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLF 693
+V+RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 604 VVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFTK-QELRE------------ 650
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 651 ------LFTIEDFQNSATQLQLQSLHAAQRRSDKILDEHIA 685
>gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1045
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 285/562 (50%), Gaps = 70/562 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V I +L HQR GV+FL+ + HG IL D+MGLGKTIQT+A +
Sbjct: 352 VVVDPVIGDKLRPHQRAGVRFLFDCITGERMPGYHGAILADEMGLGKTIQTVATIYTCLR 411
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDM 236
+ + T K L++ PSS+++NW EF +W Y P D
Sbjct: 412 QGKHGVPTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDR 462
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I+ + + G +VL+ S+D R + + +S + + E+V+ DE HRLKN + K A L T
Sbjct: 463 IISRFDGEG-DVLVISYDQLRKYIARISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPT 521
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNRI L+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE +
Sbjct: 522 RNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLG 581
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+R +L + ++++LRRT+ +L K D VF + +LQ AY +L L E
Sbjct: 582 SDRAHYLSNLTQRFILRRTQSINESYLPP-KVDVTVFVRLGELQSVAYEKLSDLVE---- 636
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
SCP +++ L KL NH++L E
Sbjct: 637 ---------------------------SSSCPPLVLISALRKL---CNHMDLFY-----E 661
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--D 533
E+ P L G G + GKM + ++ + G D
Sbjct: 662 AVLNSSKEEVREGRGLPKSVLPKGYKS-----GTLSEAAGGKMHFVSLMLDELRNNGDRD 716
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K+++ S + LD++ +K SF +LDGS P RQ +VD FN S++ VFL+S++
Sbjct: 717 KLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLLSSK 776
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLSAGS+EE +Y R
Sbjct: 777 AGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKIYQR 836
Query: 653 QVYKQQLSNIAVSGKLE-KRYF 673
QV KQ LS V K + K++F
Sbjct: 837 QVSKQGLSANVVDMKSDSKQHF 858
>gi|344281916|ref|XP_003412722.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Loxodonta africana]
Length = 1280
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 314/637 (49%), Gaps = 100/637 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+ ++
Sbjct: 140 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DAALV 193
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 194 --------NHVLLIMPTNLISTWVKEFVKWTPGMRVKAFHGPSKDERTRNLSRIQQRNGV 245
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ VI+DEAH++K +K + +NRI LTG
Sbjct: 246 IITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSATCARAIPAKNRILLTG 305
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 306 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMQYENPIIKAREKDATPGEKALGFKISENL 365
Query: 363 VAVLRKYLLRRTKEET---------IGH--------------LMMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKEE I H + K D +++ + LQ
Sbjct: 366 MAIIKPYFLRRTKEEVQEKKLSNPEIRHSKKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 425
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L+
Sbjct: 426 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLK 476
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+ Q ++ S+ G + NES GKM
Sbjct: 477 G-------------SKFSSQNENEGEGSSDVGHIDQVTDATLINES----------GKMI 513
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L +L+ +G + L+FS S ++L+ +E L + + R+DG+ L R+ ++ F
Sbjct: 514 FLMELLKRLRDEGHQTLVFSQSRQILNFIEHVLKNRHFKTLRIDGTITHLLEREKRINLF 573
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 574 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 633
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQ++K L K RYF Q+ +E
Sbjct: 634 LITCGTVEEKIYRRQIFKDSLRRQTTGDKKNPFRYFSK-QELRE---------------- 676
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 677 --LFTIEDFQNSATQLQLQSLHADQRRSDKKLDEHIA 711
>gi|340058717|emb|CCC53077.1| putative DNA repair and recombination protein RAD54 [Trypanosoma
vivax Y486]
Length = 1024
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 282/559 (50%), Gaps = 77/559 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQR GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 353 IGDKLRPHQRVGVKFLFDCITGERMPGYHGAILADEMGLGKTIQTVATVYTCLRQGKHGT 412
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDMILEKLE 242
T K LI+ PSS+++NW EF +W Y P D I+ + E
Sbjct: 413 PTARK---------ALIVTPSSLVKNWCNEFDKWLGQGAVKYFAISESTPKGDRIISRFE 463
Query: 243 ACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G +VL+ S+D R + S +S + + E+V+ DE HRLKN + K + L TRNRI L
Sbjct: 464 GEG-DVLVISYDQLRKYISRISTIKSVELVVCDEGHRLKNAEVKTTKSVDMLPTRNRIIL 522
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE + +R +
Sbjct: 523 SGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVTLGRDPDCPEHLRSLGADRAHY 582
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++++LRRT+ +L K D VF + +Q+ Y L L
Sbjct: 583 LSNLTQRFILRRTQSINESYLPP-KVDLTVFVRLGAMQRTTYESLANL------------ 629
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP---NPRDEPDK 478
+D P L+ L+++ NH++L N R E DK
Sbjct: 630 ------------------VDSSQCTPLVLI----SALRKLCNHMDLFHEAVLNSRKEGDK 667
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--DKIL 536
Q+ + +V L G + KM+ + ++ G DK++
Sbjct: 668 QQG---IPKSVLPKGFKL-----------GTLSEATGSKMQFVSLMLDELRKNGDRDKLV 713
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+ S + LD++ K SF +LDGS P RQ +VD FN S++ VFL+S++AGG
Sbjct: 714 IVSNFTQTLDVIAVMCRAKNVSFFQLDGSMPIKKRQEVVDRFNIPGSQEIVFLLSSKAGG 773
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS GS+EE +Y RQV
Sbjct: 774 VGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVYIYRLLSTGSIEEKIYQRQVS 833
Query: 656 KQQLSNIAVSGKLE-KRYF 673
KQ LS V K + K++F
Sbjct: 834 KQGLSANVVDMKTDSKQHF 852
>gi|412988921|emb|CCO15512.1| DNA repair and recombination protein RAD26 [Bathycoccus prasinos]
Length = 1189
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 296/572 (51%), Gaps = 105/572 (18%)
Query: 135 CRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+LL HQ+ VK+L++L+ + GGI+GD+MGLGKT+Q AFL A+ S S + + +
Sbjct: 374 AKLLPHQKTAVKWLWELHCQRAGGIIGDEMGLGKTVQVAAFLGAL------SKSNLYQAS 427
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRW--------------STFNVSIYHGPNRDMILEK 240
+++CP+++++ W E W + + + +G ++ +
Sbjct: 428 --------VVVCPATMLRQWRRELKIWAPELKPVVLHDSAITQDALKVANGNRKNAMKNA 479
Query: 241 LEACGVE---VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + ++IT+++ R L V W ++DE H+++N ++ + + L+T +
Sbjct: 480 IRNATRDPKGLVITTYECLRGMREDLLTVRWGYAVLDEGHKIRNPEADITVVSKRLRTVH 539
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
RI +TG +QN++ EL++L D+V PG LGT F+ + P++ G + A ++ A
Sbjct: 540 RIIMTGAPVQNRLSELWSLIDFVYPGKLGTLPVFQAQFAVPIQIGGYVNASDQAATTAYR 599
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L ++ YLLRR K++ +L K + V+FC M++ Q+ AY+ L E++ +I+
Sbjct: 600 CAVALKDLISPYLLRRLKQDLDINLP-DKTEQVLFCPMTENQRDAYKGFLSSREVEDIID 658
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
R + L G D L++I NH +L++ N R
Sbjct: 659 G-----------------RREALGGIDV------------LRKIVNHPDLLERNSR---- 685
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
G+A D GK++ K++ W S+G + L+
Sbjct: 686 --------------------AGDAN------YGDPVRSGKLQVALKILSMWKSQGHRCLV 719
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ------------ 585
FS + +MLDILE+ + +GY++ R+DG+TP R LVD FN + +
Sbjct: 720 FSQTQQMLDILEQAVANEGYTYRRMDGTTPVAHRMGLVDSFNDAGNVGEEGVAAEDMQEP 779
Query: 586 --VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
VFL++T+ GGLG+NL ANRV++FDP+WNP+ D QA++R++R GQ + V ++RL++ G
Sbjct: 780 VFVFLLTTKVGGLGINLTGANRVLLFDPDWNPSTDAQARERAWRIGQTKAVTIYRLITTG 839
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEG 675
++EE VY RQ+YK+ L+ + ++R+F+
Sbjct: 840 TIEEKVYHRQIYKEFLTGKVLKDPKQRRFFKA 871
>gi|320580373|gb|EFW94596.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1018
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 283/548 (51%), Gaps = 91/548 (16%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ + P+ I +L ++Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL
Sbjct: 109 LTESPSYIQGKLRDYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLG-------- 160
Query: 186 SDSTILKDNK-VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEK 240
L+ K +D G +++ P S + NW EF+RW+ NV + G + +I +K
Sbjct: 161 ----FLRYYKGID--GPFIVVVPKSTLDNWRREFARWTPEVNVLVLQGTKEERAELINDK 214
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
L +V ITSF+ S L ++ WE +++DEAHR+KNE+S L +++R+
Sbjct: 215 LMQADFDVCITSFEMVIREKSKLGKIRWEYIVIDEAHRIKNEESALSQIIRVFYSKHRLL 274
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F E+++ + Q D+ Q
Sbjct: 275 ITGTPLQNNLHELWALLNFILPDVFGDDEVFNEWFESQGEEDQ------------DQVVQ 322
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VL +LLRR K + L+ E N V+ M+D+Q + YR LL+ KD+
Sbjct: 323 KLHKVLSPFLLRRVKSDVEKSLLPKIETN-VYVGMTDMQIKWYRNLLE---------KDI 372
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPD 477
G+ + + E RL N+ +++L++ NH E +P P D
Sbjct: 373 DAVNGA-IGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTD 417
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ V + GKM L+KL+ S+G ++L+
Sbjct: 418 EHL-------------------------------VYNSGKMIVLDKLLKKLQSEGSRVLI 446
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGL 596
FS R+LDILE + +GY + R+DGST R +DDFN S K +FL++TRAGGL
Sbjct: 447 FSQMSRLLDILEDYCYLRGYQYCRIDGSTAHEERIQSIDDFNKPGSDKFIFLLTTRAGGL 506
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V R K
Sbjct: 507 GINLTTADAVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTENAIEEKVLERAAQK 566
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 567 LRLDQLVI 574
>gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1047
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 287/556 (51%), Gaps = 70/556 (12%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQR GV+FL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 358 IGDKLRPHQRAGVQFLFDCITGERMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGV 417
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDMILEKLE 242
T K L++ PSS+++NW EF +W Y P D I+ + +
Sbjct: 418 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDRIISRFD 468
Query: 243 ACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G +VL+ S+D R + + +S + + E+V+ DE HRLKN + K A L TRNRI L
Sbjct: 469 GEG-DVLVISYDQLRKYITRISTLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIIL 527
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE + +R +
Sbjct: 528 SGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHY 587
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++++LRRT+ +L K D VF + +LQ AY +L L E
Sbjct: 588 LSNLTQRFILRRTQSINESYLPP-KVDVTVFVRLGELQSVAYEKLSDLVE---------- 636
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
GS SCP +++ L KL NH++L + ++ +
Sbjct: 637 ---GS------------------SCPPLVLISALRKL---CNHMDLFYEAVLNSSKEEVR 672
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--DKILLFS 539
+ P L G G + GKM + ++ + G DK+++ S
Sbjct: 673 EGHGI-----PKSVLPKGYKS-----GTLSEAAGGKMHFVSLMLDELRNNGDRDKLVIVS 722
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD++ +K SF +LDGS P RQ +VD FN S++ VFL+S++AGG+GL
Sbjct: 723 NFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLLSSKAGGVGL 782
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLSAGS+EE +Y RQV KQ
Sbjct: 783 NLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKIYQRQVSKQG 842
Query: 659 LSNIAVSGKLE-KRYF 673
LS V K + K++F
Sbjct: 843 LSANVVDMKSDSKQHF 858
>gi|332861007|ref|XP_003317563.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Pan troglodytes]
Length = 1250
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 318/637 (49%), Gaps = 102/637 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS E W+ VI+DEAH++K +K + + NR+ LTG
Sbjct: 198 IITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKE + I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
S + + +D+ PD+D + + + ++ GKM
Sbjct: 429 TFSA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMI 463
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 464 FLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLF 523
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 524 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 583
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 LITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE---------------- 626
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 --LFTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>gi|410257904|gb|JAA16919.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
gi|410349947|gb|JAA41577.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
Length = 1250
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 318/637 (49%), Gaps = 102/637 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS E W+ VI+DEAH++K +K + + NR+ LTG
Sbjct: 198 IITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKE + I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
S + + +D+ PD+D + + + ++ GKM
Sbjct: 429 TFSA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMI 463
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 464 FLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLF 523
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 524 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 583
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 LITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE---------------- 626
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 --LFTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio]
gi|182645387|sp|A2BGR3.1|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
Length = 1451
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 316/641 (49%), Gaps = 110/641 (17%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L +HQ+EGV FLY LY++ + GGIL DDMGLGKTIQ I+FL+ ++
Sbjct: 104 KLYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMY-------------- 149
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACGVEVLI 250
+ + L++ P+S+I+NW EF++W+ V +HG + R+ LE+++ G V+I
Sbjct: 150 DAELANHTLLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKG-GVII 208
Query: 251 TSF----DSYRIHGSI-LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ ++Y GS E W+ VI+DEAH++K +K + + +NR+ LTGT
Sbjct: 209 TTYQMLINNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTP 268
Query: 306 MQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E++ LFD+ GS LGT + F+ Y+ P+ + A + Q+L
Sbjct: 269 VQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTD 328
Query: 365 VLRKYLLRRTKEETIGH----------------------------LMMGKEDNVVFCTMS 396
+++ Y LRRTK + + K D +V+ +S
Sbjct: 329 IIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLS 388
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
+Q+ Y + + L +I K+L + SPL ++ K+L CD P L ++
Sbjct: 389 SVQEDIYNKFISLDQI-----KELLTTTRSPLAELTVLKKL-----CDH-PRLLSQRAVI 437
Query: 457 KLQ-QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
+L + + EL+ + E SAV D N + + I +
Sbjct: 438 QLGLERGSDSELVHSD------------ESESAVSQID------NISDHTLI-----EES 474
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSL 574
GK++ + LM +G + L+FS S +MLDI+E+ L + + RLDG+ T R+
Sbjct: 475 GKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTVTQLAEREKR 534
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+ F + +FL++T+ GG+G+ L ANRVVIFDP+WNPA D QA DR++R GQ +V
Sbjct: 535 ISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFDPSWNPATDAQAVDRAYRIGQTENV 594
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLF 693
I++RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 595 IIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYF-SKQELRE------------ 641
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LF E S Q Q Q H + + L+ HI
Sbjct: 642 ------LFKLEDTRSSSTQQQLQAMHAQSRRSDTSLDHHIA 676
>gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens]
gi|121948339|sp|Q2NKX8.1|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like; AltName:
Full=PLK1-interacting checkpoint helicase; AltName:
Full=Tumor antigen BJ-HCC-15
gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Homo sapiens]
gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens]
Length = 1250
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 318/637 (49%), Gaps = 102/637 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS E W+ VI+DEAH++K +K + + NR+ LTG
Sbjct: 198 IITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKE + I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
S + + +D+ PD+D + + + ++ GKM
Sbjct: 429 TFSA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMI 463
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 464 FLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLF 523
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 524 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 583
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 LITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE---------------- 626
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 --LFTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>gi|397467179|ref|XP_003805304.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pan paniscus]
Length = 1250
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 318/637 (49%), Gaps = 102/637 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS E W+ VI+DEAH++K +K + + NR+ LTG
Sbjct: 198 IITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKE + I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
S + + +D+ PD+D + + + ++ GKM
Sbjct: 429 TFSA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMI 463
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 464 FLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLF 523
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 524 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 583
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 LITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE---------------- 626
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 --LFTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>gi|426396380|ref|XP_004064422.1| PREDICTED: DNA excision repair protein ERCC-6-like [Gorilla gorilla
gorilla]
Length = 1249
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 316/634 (49%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L S
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLGTFS 431
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + + + ++ GKM L
Sbjct: 432 A-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMIFLM 466
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 467 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQN 526
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 527 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 586
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 587 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 627
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 628 FTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 934
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 293/575 (50%), Gaps = 67/575 (11%)
Query: 112 PFEP----LVLSKD---GEYPIIQVPASINCRLLEHQREGVKFLYKL------YKNKHGG 158
P+ P L + KD GE P++ P N +L HQR G++F++ +K+ +G
Sbjct: 269 PYAPNAFVLYMPKDQLNGEIPVVMDPMLGN-KLRPHQRVGIQFMFDCLLGLGGFKDGNGC 327
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
IL DDMGLGKTIQ I+ + + + + T + +I+ P+ ++ NW E
Sbjct: 328 ILADDMGLGKTIQAISIMWTLLKQGIRGEPTCQR---------AIIVAPTGLVGNWVKEL 378
Query: 219 SRWSTFNV-SIYHG---PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNW-EIVIV 273
+W + SI+ G P L +LE +VL+ S+D +I + L +++ +VI
Sbjct: 379 KKWLGEGIKSIHIGKSTPTGRAKLAQLETGDADVLVISYDQLKIWINDLIKIDMIGLVIC 438
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE HRLKN ++K A L T+ R+ L+GT +QN +ME Y + ++V PG L + F
Sbjct: 439 DEGHRLKNAETKSTQAVNMLPTKRRVILSGTPIQNNLMEFYAMVNFVNPGVLKSVPMFNN 498
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
Y+ P+ + A R+ ER L + K++LRRT +L K + VFC
Sbjct: 499 VYNGPILASRSPDATPEEKRVGRERSLMLTEITGKFILRRTAAINTQYL-PKKTEYTVFC 557
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
+S LQK Y +LL++ + G F LP
Sbjct: 558 KLSPLQKTIYLKLLEI------------------------------IKGRGYQTFTGALP 587
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
+ L+++SN EL+ P + D + ++ + ++ G E +S +
Sbjct: 588 LITSLKKLSNCPELVYTPPSAKEDDKEEEKAEDVS------SVIHGLFPKEFNTKVSQPQ 641
Query: 514 SCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
GK++ ++ LM +K D++++ S + L +L + +GY F +LDGSTPS+ RQ
Sbjct: 642 YSGKLQFIDTLMQQIRNKTKDRVVVISNYTQTLSVLARLCNERGYPFFQLDGSTPSDKRQ 701
Query: 573 SLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
LVD FN S Q VFL+S++AGG+GLNL+ AN +++ DP+WNPA D QA R +R GQK
Sbjct: 702 VLVDKFNDPSSPQFVFLLSSKAGGIGLNLIGANHLILVDPDWNPANDAQAMARVWREGQK 761
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
+ V ++R LS G++EE +Y RQ+ K LS V G
Sbjct: 762 KVVSIYRTLSTGTIEEKIYQRQITKMALSVSVVEG 796
>gi|391348669|ref|XP_003748567.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 966
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 290/561 (51%), Gaps = 87/561 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
I RL +Q + +K++Y+L++ K GG+LGDDMGLGKTIQ IA+LA +F
Sbjct: 18 IQSRLFPYQIDALKWMYRLHQRKKGGVLGDDMGLGKTIQVIAYLAGLFD----------- 66
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPN---RDMILEKLEACGVEV 248
++K VL+I P S+I NW EF +W+ V YH +++ L+K+ G +
Sbjct: 67 ---MEKVKSVLLIMPVSLIGNWCTEFEKWAPGITVYDYHSATKREKELFLKKVMNRGGVI 123
Query: 249 L------ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
L T + R +GS W+ VI+DE H++KN +K A L +R+ LT
Sbjct: 124 LTTYGMVTTRHEDLRNNGS--RRFIWDYVILDEGHKIKN-PTKTQSAVFGLPAHHRLVLT 180
Query: 303 GTIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
GT +QN + EL++L+ + G+L G F++ ++ P+ G+ A + + +
Sbjct: 181 GTAVQNNLSELWSLYHFTHQGTLFGNLAGFKQDFETPINRGRERDAKPGEREMGVQLAKQ 240
Query: 362 LVAVLRKYLLRRTKEE-----TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
L ++ Y LRRTK E T + KED V++ +S+ Q+ YR LQ +++ ++
Sbjct: 241 LKEMIAPYFLRRTKAEVFRSGTGPRIEAQKEDLVLWTYLSETQQELYRDFLQSDDVKAIL 300
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL--------QQISNHLELI 468
+ SPL Q+ K++ CD P L V+L +I LE
Sbjct: 301 -----LTSKSPLVQLNILKKI-----CDH-PRLLPKKACVQLGLCDDMTEAEIQEFLEDD 349
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
K P F D D+ + NES GKMR + KL
Sbjct: 350 KHCP-----------------FSID-DVSDEDLLNES----------GKMRLMLKLTEQL 381
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSSPSKQVF 587
+G + L+FS S R+LD++++ L ++ SRLDG+ R+ +VD F S VF
Sbjct: 382 REEGHRTLIFSTSRRILDMIQRILRSHRFTISRLDGTIHKTAERKRIVDTFQKQGS-DVF 440
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L++T+ GG+GL L +A+RV+I+DPNWNPA D QA DR+FR GQ R V+V+RL++ G++EE
Sbjct: 441 LLTTQVGGVGLTLTNADRVIIYDPNWNPATDAQAVDRAFRIGQTRDVLVYRLITCGTVEE 500
Query: 648 LVYTRQVY-----KQQLSNIA 663
+Y RQ++ KQ N+A
Sbjct: 501 KIYARQIFKDSIIKQTTGNVA 521
>gi|241074609|ref|XP_002408725.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492547|gb|EEC02188.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1216
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 199/632 (31%), Positives = 321/632 (50%), Gaps = 100/632 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
I +L +QREG+ +++ LY K GG+LGDDMGLGKT+Q IAFL+ +F D+ ++K
Sbjct: 14 IEKKLYAYQREGLLWMWGLYLKKRGGVLGDDMGLGKTVQVIAFLSGMF------DADLIK 67
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNR---DMILEKLEACGVEV 248
VL+I P S+I NW+ EF W+ V YH + + L +++ G V
Sbjct: 68 S--------VLLIMPVSLIPNWKKEFQAWAPGIRVFDYHSSTKKEKERSLARVQNRG-GV 118
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
L+TS+ + ILS + W +I+DE H++KN +K A EL ++R+ LTG
Sbjct: 119 LLTSYGMVQTSAEILSAQGGRKFVWCYLILDEGHKIKN-PTKTTKAVYELPAKHRLVLTG 177
Query: 304 TIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQR--LTAPERFIRIADERKQ 360
T +QN + EL+ L+++ G+L G+ F+ Y+ + + TA ER + I E +
Sbjct: 178 TAIQNNLRELWALYNFAHQGTLLGSLATFKSQYETHINRSREKDATAGERLLGI--EISK 235
Query: 361 HLVAVLRKYLLRRTKEETIGH----------------LMMGKEDNVVFCTMSDLQKRAYR 404
+L+ + + LRRTK E + + K D VV+ +S++QK+ YR
Sbjct: 236 NLMEKISPFFLRRTKAEVLENKENTEQETDSLRPKLCFTAKKNDLVVWVYLSEVQKKIYR 295
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
L+ E+ ++ + SPL Q+ K++ CD C+ Q+ +
Sbjct: 296 EFLESEEVANIL-----MTKKSPLVQLTILKKI-----CDHPRLLSKRACV----QMGMY 341
Query: 465 LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
++ + + DK+ ++ S V PD L+ GKM + +L
Sbjct: 342 DDMTQDQIEEFLDKEEGNSMTISDV--PDDTLLA---------------ESGKMTFVLEL 384
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDFNSSPS 583
+ + S+G + L FS S ++LDI+++ L+ +G+ +RLDG+ T R LV F +
Sbjct: 385 LLNLKSEGHRTLFFSQSRKILDIIQRILLNRGFRVTRLDGTITKLCERDRLVTQFQTRSL 444
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+FL++T+ GG+GL L SA+RVVI+DP+WNPA D QA DR++R GQ ++V+V+RL++
Sbjct: 445 ADIFLLTTQVGGVGLTLTSADRVVIYDPSWNPATDAQAVDRAYRIGQSKNVVVYRLVTCS 504
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEK--RYFEGVQDCKEFQGELFGICNLFRDLSDNLF 701
++EE +Y RQ++K + +GK RYF Q+ +E LF
Sbjct: 505 TVEEKIYRRQIFKDSIIK-QTTGKQRDPVRYFTK-QELRE------------------LF 544
Query: 702 TSEIIESHEEQGQQQERHHCTNQGFKGLETHI 733
T E Q Q E H + GL+ HI
Sbjct: 545 TLEDPSHSATQVQLAEMHSHHKRTDHGLDVHI 576
>gi|297710314|ref|XP_002831842.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Pongo abelii]
Length = 1250
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 315/635 (49%), Gaps = 104/635 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKLQQI 461
YR+ + L I K+L SPL ++ K+L CD C L+ L
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACGLLNLGTF 430
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
S + + +D+ PD+D + + + ++ GKM L
Sbjct: 431 SA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMIFL 465
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNS 580
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 466 MDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQ 525
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 526 NKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 585
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDN 699
+ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 586 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------ 626
Query: 700 LFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 LFTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 661
>gi|261329556|emb|CBH12538.1| DNA excision repair protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1126
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 305/581 (52%), Gaps = 57/581 (9%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I + +SI +L +HQR+G+K+L L++ GGILGDDMGLGKTIQ A L A+
Sbjct: 398 ISLASSIYQKLFDHQRDGLKWLLNLHRQHVGGILGDDMGLGKTIQIAAMLNAL------- 450
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYHGPN-----RDMILEK 240
++ +G LI+ P +V++ W E RW+ + + H + R+ +++
Sbjct: 451 ------NHSNQLRGPSLIVTPVTVLRQWVAEMHRWAPYVRTCVMHASSASTISREKLIDS 504
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +R+
Sbjct: 505 VRGTPA-VLLTTYAAVREHCRLLHNACFQYVILDEGHKISNPEATVTIAAKSFPTPHRLI 563
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + EL+ LFD+V PG LGT F E ++ P+ + + A + A E +
Sbjct: 564 LSGTPVQNTLKELWCLFDFVKPGLLGTLRRFEEEFEVPINASKNIRASPLALATAAETAR 623
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + +LLRR K++ + + K + V+ C +SD Q AY LL +Q L++ L
Sbjct: 624 VLHESISPFLLRRLKKQVMSDSLPEKYERVIRCPLSDSQLEAYVDLLSSSRVQRLMSNTL 683
Query: 421 PCSCGSPLTQVECCKRLDNLD--GCDSCP---FCLV------------LPCLV-KLQQIS 462
TQ+ D D GC F L+ L C++ +L+QI
Sbjct: 684 ------SYTQLMGGLDRDGRDASGCLHIAGKRFQLMRDKENKGVVRHELFCVMHELRQIC 737
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS----------DV 512
NH+++ + R D D ++ + F ++ A+ G + +
Sbjct: 738 NHVDIF--HMRQAKDFNYTD-DMENNFFLDVVNAPTATARKAGGKGTTHFSMRSNRPVNY 794
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
+ K++ L +L+ W G + L+FS + MLDI+E ++ ++ R+DG+T S RQ
Sbjct: 795 EGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYIRMDGTTNSLRRQ 854
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
L+D FN V L++TR GG+G+NL+ A+RVVIFDP+WNP D QA++R++R GQ R
Sbjct: 855 ELMDRFNEDDRIVVALLTTRVGGVGVNLIGADRVVIFDPDWNPVTDEQARERAWRIGQTR 914
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
V V+RL+S+G++EE V RQ+ K ++ + +R+F
Sbjct: 915 DVGVYRLISSGTVEEAVLRRQLAKTYVTEKVLHDPKLQRFF 955
>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
Length = 749
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 284/548 (51%), Gaps = 65/548 (11%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ K +G I+ D+MGLGKT+Q I L + + +
Sbjct: 153 CNVLRPHQREGVKFMYECVTGKRIEEAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 212
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA--- 243
I K +I+ PSS+++NW E +W V G ++ I KL
Sbjct: 213 LIEK---------AIIVAPSSLVKNWYNEIFKWLQNRVKPLAIDGGSKSEIDAKLTGFMK 263
Query: 244 -----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H +L + + +V+ DE HRLKN +++ Y A + LK + R
Sbjct: 264 TYGRRCATPILIISYETFRLHAHVLHQDDVGLVLCDEGHRLKNSENQTYQALMGLKAKRR 323
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT FR+ ++ P+ GQ A ++ +IA ER
Sbjct: 324 VLLSGTPIQNDLLEYFSLIHFVNSGLLGTAAEFRKKFENPILRGQDAGATDKERQIAQER 383
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
LV V+ K L+RRT +L + K + VV M+ LQ + Y+ ++ I+ +
Sbjct: 384 LTELVTVVNKCLIRRTSALLSKYLPL-KHELVVCIKMTPLQTQLYKNFIKSDSIKKSMQD 442
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D GS L + L+++ NH +L+ ++ D
Sbjct: 443 DGTAKKGS----------------------LSALSAITLLKKLCNHPDLVYEKIQENSDG 480
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILL 537
A+L A + + E LS GK+ L+ L+ + ++ DKI+L
Sbjct: 481 FEGAAKLLPANY----------STKEVMPELS-----GKLMVLDCLLAFIKSTTTDKIVL 525
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ E+ ++ Y + RLDG+ R +VD+FN+ S +F++S++AGG
Sbjct: 526 VSNYTQTLDLFERLCAKRKYKYVRLDGTMSIKKRAKVVDNFNNPDSGDFIFMLSSKAGGC 585
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNLV ANR+V+FDP+WNPA D QA R +R GQK+ V+R L G++EE ++ RQ +K
Sbjct: 586 GLNLVGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLCTGTIEEKIFQRQAHK 645
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 646 KALSSTVV 653
>gi|154334239|ref|XP_001563371.1| putative DNA excision repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060387|emb|CAM37551.1| putative DNA excision repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1258
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 303/571 (53%), Gaps = 41/571 (7%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
P ++ A+I RLL++Q+EG+ +L L+ + GGILGD+MGLGKTIQ A + A+
Sbjct: 467 PQARMDAAIYNRLLDYQQEGLLWLLALHSRRSGGILGDEMGLGKTIQVAAMINALH---- 522
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS-IYHGPN-----RDMIL 238
S +L G VLI+ P +V++ W E RW+ + S + H + R+ +L
Sbjct: 523 --HSCMLH-------GPVLIVAPMTVLRQWLAELHRWAPYVRSCVMHESSGSDVTREWLL 573
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ ++ V+IT++ + RIH +L ++ VI+DE H++ N ++ +A T +R
Sbjct: 574 QSVQGTPA-VIITTYAAMRIHLGLLLRTGFQYVILDEGHKVSNPEAGATLAAKSFTTPHR 632
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+G+ +QN + EL+ LFD+V PG LGT F + ++ P+ + A A E
Sbjct: 633 LILSGSPIQNSLKELWCLFDFVRPGLLGTMSRFIDEFETPIAQSRNACASPLSQATAVEC 692
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L A + YLLRR K + + + K + V+ ++D Q Y ++L P +Q L +
Sbjct: 693 AKALQAHIAPYLLRRLKRQ-VNTSLPPKYERVLRVPLTDEQLDQYLQVLCSPVVQRLFAQ 751
Query: 419 DLPCSCGSPLTQV-----ECCKRLD------NLDG--CDSCPFCLVLPCLVKLQQISNHL 465
CGSP + +C L N+ +S + +L+QI NH
Sbjct: 752 --MGMCGSPNGGLDRDGRDCTGSLHVAGPRVNMASRRYNSSLRLASFRLMNQLRQICNHA 809
Query: 466 ELIK-PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK--SCGKMRALE 522
++ DE D+ A+ G Q+ SF + V GK+ AL
Sbjct: 810 DIYAVQQGADEEDRMMLGRHGAATKSSSASATRSG--QHRSFRSNNPVNLLGSGKLNALL 867
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ W G ++L+FS + MLDI+E + Y + R+DG T + RQ L+D FN
Sbjct: 868 MMLKEWQLFGHRVLIFSQTRMMLDIIENMCEQHAYRYIRMDGETNGHHRQELMDRFNEDD 927
Query: 583 SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
S V L++TR GG+G+NL+ A+RVVIFDP+WNP D+QA++R++R GQKR V V+RL+++
Sbjct: 928 SIFVALLTTRVGGIGVNLIGADRVVIFDPDWNPITDVQARERAWRIGQKREVCVYRLITS 987
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
GS+EE + RQ+ K +++ + +R+F
Sbjct: 988 GSVEEAILRRQLAKMYVTDKVLKDPELQRFF 1018
>gi|72391474|ref|XP_846031.1| DNA excision repair protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176576|gb|AAX70681.1| DNA excision repair protein, putative [Trypanosoma brucei]
gi|70802567|gb|AAZ12472.1| DNA excision repair protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 1126
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 306/581 (52%), Gaps = 57/581 (9%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I + +SI +L +HQR+G+++L L++ + GGILGDDMGLGKTIQ A L A+
Sbjct: 398 ISLASSIYQKLFDHQRDGLRWLLNLHRQRVGGILGDDMGLGKTIQIAAMLNAL------- 450
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYHGPN-----RDMILEK 240
++ +G LI+ P +V++ W E RW+ + + H + R+ +++
Sbjct: 451 ------NHSNQLRGPSLIVTPVTVLRQWVAEMHRWAPYVRTCVMHASSASTISREKLIDS 504
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ VL+T++ + R H +L ++ VI+DE H++ N ++ + +A T +R+
Sbjct: 505 VRGTPA-VLLTTYAAVREHCRLLHNACFQYVILDEGHKISNPEATVTIAAKSFPTPHRLI 563
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + EL+ LFD+V PG LGT F E ++ P+ + + A + A E +
Sbjct: 564 LSGTPVQNTLKELWCLFDFVKPGLLGTLRRFEEEFEVPINASKNIRASPLALATAAETAR 623
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + +LLRR K++ + + K + V+ C +SD Q AY LL +Q L++ L
Sbjct: 624 VLHESISPFLLRRLKKQVMSDSLPEKYERVIRCPLSDSQLEAYVDLLSSSRVQRLMSNTL 683
Query: 421 PCSCGSPLTQVECCKRLDNLD--GCDSCP---FCLV------------LPCLV-KLQQIS 462
TQ+ D D GC F L+ L C++ +L+QI
Sbjct: 684 ------SYTQLMGGLDRDGRDASGCLHIAGKRFQLMRDKENKGVVRHELFCVMHELRQIC 737
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS----------DV 512
NH+++ + R D D ++ + F ++ A+ G + +
Sbjct: 738 NHVDIF--HMRQAKDFNYTD-DMENNFFLDVVNAPTATARKAGGKGTTHFSMRSNRPVNY 794
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
+ K++ L +L+ W G + L+FS + MLDI+E ++ ++ R+DG+T S RQ
Sbjct: 795 EGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYIRMDGTTNSLRRQ 854
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
L+D FN V L++TR GG+G+NL+ A+RVVIFDP+WNP D QA++R++R GQ R
Sbjct: 855 ELMDRFNEDDRIVVALLTTRVGGVGVNLIGADRVVIFDPDWNPVTDEQARERAWRIGQTR 914
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
V V+RL+S+G++EE V RQ+ K ++ + +R+F
Sbjct: 915 DVGVYRLISSGTVEEAVLRRQLAKTYVTEKVLHDPKLQRFF 955
>gi|342185668|emb|CCC95153.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1029
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 282/549 (51%), Gaps = 73/549 (13%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V I +L HQR GVKFL+ + HG IL D+MGLGKTIQT+A +
Sbjct: 354 VVVDPVIGDKLRPHQRVGVKFLFDCITGERMPGYHGAILADEMGLGKTIQTVATVYTCLR 413
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDM 236
+ + + T K LI+ PSS+++NW EF +W Y P D
Sbjct: 414 QGKYGNPTARK---------CLIVTPSSLVKNWCNEFDKWLGVGAVKYFAISESTPKGDR 464
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I+ + + G +VL+ S+D R + + +S + + E+V+ DE HRLKN + K A L T
Sbjct: 465 IISRFDGEG-DVLVISYDQLRKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPT 523
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNRI L+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE +
Sbjct: 524 RNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVTLGRDPDCPEYLRMLG 583
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQC 414
+R +L + +K++LRRT+ +L K D VF + Q+ AY+++ +L E QC
Sbjct: 584 ADRAHYLSNLTQKFILRRTQSINESYLPP-KVDLTVFVRLGVKQETAYKKVAELVENSQC 642
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
+PL + L+++ NH++L +
Sbjct: 643 -----------TPLVLISA------------------------LRKLCNHMDLFHEAVLN 667
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-- 532
+K + L +++ +G + KMR + ++ G
Sbjct: 668 S-NKNNDNGSLPTSLIPKGYK-----------VGTLSEEVGSKMRFVSLMLDELQKNGDH 715
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIST 591
DK+++ S + LD++ K SF +LDGS P RQ +VD FN+ SK+ VFL+S+
Sbjct: 716 DKLVIVSNFTQTLDVIASLCKMKKISFFQLDGSMPIKKRQEVVDRFNTPVSKEIVFLLSS 775
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGG+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS GS+EE +Y
Sbjct: 776 KAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQ 835
Query: 652 RQVYKQQLS 660
RQV KQ LS
Sbjct: 836 RQVSKQGLS 844
>gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
Length = 731
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 283/559 (50%), Gaps = 77/559 (13%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKH------GGILGDDMGLGKTIQTIAFLAAVF 180
+ V I+ L HQR GVKFLY + G IL D MGLGKT+QT+A + +
Sbjct: 37 VIVDPHISQHLRPHQRRGVKFLYDCVTGTNNEEGYTGAILADQMGLGKTLQTLALVWTLL 96
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--------STFNVSIYHGP 232
+ + STI K +I+ PS+++ NW+ E +W +T S+
Sbjct: 97 KQSPTGKSTIKK---------AIIVTPSTLVNNWKKEIQKWFGLDRLIATTLTDSLSKET 147
Query: 233 NRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
+ L+ VLI S++ RI IL ++ +++ DEAHRLKN SK A
Sbjct: 148 KTN--LDNFNTSIKPVLIISYEQCRIFSKILETMSCGLLVCDEAHRLKNSNSKTTQAINS 205
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
+K +I LTGT +QN ++E Y++ D+ PGSLG+ F++ + P+ + T + I
Sbjct: 206 VKAERKILLTGTPIQNDLVEFYSMVDFCNPGSLGSLASFKKNFINPINKSRESTGNPKDI 265
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
++ L + + ++LRR K + + K VVFC +S LQ+ Y+ +L +
Sbjct: 266 ENGTKKSIELSKLTKSFILRR-KSNILEKYLPPKRVQVVFCRLSPLQQDLYKSVLNSNSV 324
Query: 413 QCLIN-KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
Q LIN K+ P S L+ + K+L C+S P L LQ S
Sbjct: 325 QSLINGKESPASS---LSTITLLKKL-----CNS-------PSL--LQDTS--------- 358
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
D EL S ++ + +NE+ GK+ +E L+ S
Sbjct: 359 ----------DQELQSIFKQYSYNM--ESMENEA----------GKLLFVESLIKQLKSV 396
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK--QVFLI 589
G+K++L S + LD+ E+ + F RLDGS S+ RQSLVD FN +K Q+FL+
Sbjct: 397 GEKLVLVSNYTQTLDVFERLCKKLSTDFLRLDGSVSSDTRQSLVDKFNDQSNKKYQIFLL 456
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S +AGG+G+NL+ N +V++DP+WNPA D+QA +R +R GQ + V ++RL S G++EE +
Sbjct: 457 SAKAGGVGINLIGGNHLVLYDPDWNPAIDIQAMERVWREGQNKPVFIYRLFSTGTIEEKI 516
Query: 650 YTRQVYKQQLSNIAVSGKL 668
Y RQ+ K+ +SN V K
Sbjct: 517 YQRQLMKESISNSIVDKKF 535
>gi|407425454|gb|EKF39433.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi marinkellei]
Length = 1049
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 276/548 (50%), Gaps = 69/548 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V I +L HQR GV+FL+ + HG IL D+MGLGKTIQT+A +
Sbjct: 352 VVVDPVIGDKLRPHQRAGVRFLFDCITGERMPGYHGAILADEMGLGKTIQTVATIYTCLR 411
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-----PNRDM 236
+ + T K L++ PSS+++NW EF +W Y P D
Sbjct: 412 QGKHGVPTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISESTPKGDR 462
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I+ + + G +VL+ S+D R + + +S + + E+V+ DE HRLKN + K A L T
Sbjct: 463 IISRFDGEG-DVLVISYDQLRKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPT 521
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNRI L+GT +QN + E + + +V PG LG+R+ F ++EP+ G+ PE +
Sbjct: 522 RNRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLG 581
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+R +L + ++++LRRT+ +L K D VF + +LQ AY +L L E
Sbjct: 582 SDRAHYLSNLTQRFILRRTQSINESYLPP-KVDVTVFVRLGELQSVAYEKLSALVE---- 636
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
C L + L+++ NH++L E
Sbjct: 637 ------------------------------SSLCPPLVLISALRKLCNHMDLFY-----E 661
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--D 533
E+ P L G G + GKM + ++ + G D
Sbjct: 662 AVLNSSKEEVREGRGIPKTVLPKGYKS-----GTLSEAAGGKMHFVSLMLDELRNNGDRD 716
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K+++ S + LD++ +K SF +LDGS P RQ +VD FN S++ VFL+S++
Sbjct: 717 KLVIVSNFTQTLDVIAAMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLLSSK 776
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLSAGS+EE +Y R
Sbjct: 777 AGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKIYQR 836
Query: 653 QVYKQQLS 660
QV KQ LS
Sbjct: 837 QVSKQGLS 844
>gi|224098212|ref|XP_002194690.1| PREDICTED: DNA excision repair protein ERCC-6-like [Taeniopygia
guttata]
Length = 1170
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 298/572 (52%), Gaps = 79/572 (13%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L +HQREGV FLY+L++ K GGIL DDMGLGKTIQ IAFL+ +F D+ +++
Sbjct: 102 KLFQHQREGVAFLYRLHRERKPGGILADDMGLGKTIQVIAFLSGMF------DAELIQ-- 153
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P++++ +W EF+RW+ V +HG ++ LE + ++IT
Sbjct: 154 ------HVLLIMPTTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVIT 207
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
S+ + L+ E W+ +I+DEAH++K +K + RI LTGT +
Sbjct: 208 SYQMLINNWKQLASRHEQEFVWDYIILDEAHKIKCPSNKTTKCVYAIPAHYRILLTGTPV 267
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + E+++LFD+ GSL GT + F+ Y+ P+ + A + + ++L+++
Sbjct: 268 QNNLREMWSLFDFACQGSLLGTAKTFKMEYENPITRAREKDATPGEKALGLKISENLMSI 327
Query: 366 LRKYLLRRTKEET----------------------IGHLMMGKEDNVVFCTMSDLQKRAY 403
++ Y LRRTKE+ + + K D VV+ ++ +Q+ Y
Sbjct: 328 IKPYFLRRTKEDIKKYHADKADSPLSEDPSENKAPVMPSLTRKNDFVVWVYLAPVQEEIY 387
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
R L L + K++ SPL ++ K+L CD C
Sbjct: 388 RNFLCLDHV-----KEVLMMNRSPLAELTILKKL-----CDHPRLLSTRAC--------T 429
Query: 464 HLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
L L +E + +D + + +F G + + + ++ GKM+ L
Sbjct: 430 QLGL------EEEEDSEQDYRMEAIMFS-------GKNKIDHLSDETVIEESGKMQFLVG 476
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDFNSSP 582
L+ +G + L+FS S +MLDI+E L R+ + R+DG+ T R+ ++ F ++
Sbjct: 477 LLERLREEGHRTLVFSQSRKMLDIIELVLSRRQFQILRIDGTVTHLTERERRINAFQTNT 536
Query: 583 SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
+ VFL++T+ GG+G+ L +A+RVVIFDP+WNPA D QA DR++R GQK +V+++RL++
Sbjct: 537 TYSVFLLTTQVGGVGITLTAASRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITC 596
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLEK-RYF 673
G++EE +Y RQV+K L K RYF
Sbjct: 597 GTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYF 628
>gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Callithrix jacchus]
Length = 1229
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 314/634 (49%), Gaps = 101/634 (15%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 71 QLFEHQKEGVAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 121
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P++++ W EF +W+ V +HGP++D L V+IT
Sbjct: 122 -----NHVLLIMPTNLMNTWLKEFVKWTPGMRVKTFHGPSKDERTRNLNWIQQRNGVIIT 176
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 177 TYQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLLLTGTPI 236
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + FR Y+ P+ + A + + ++L+A+
Sbjct: 237 QNNLRELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKISENLMAI 296
Query: 366 LRKYLLRRTKEETIGHL----------------------MMGKEDNVVFCTMSDLQKRAY 403
++ Y LRRTKEE + K D +++ + LQ+ Y
Sbjct: 297 IKPYFLRRTKEEVQKKTSNPDVKLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIY 356
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKLQQIS 462
R+ + L I K+L SPL ++ K+L CD C L+ L ++
Sbjct: 357 RKFVSLDHI-----KELLMETRSPLAELGILKKL-----CDHPRLLSARACGLLNLGTVT 406
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + + + ++ GKM L
Sbjct: 407 FSA---------QDGNEGEDS--------PDMDHI------DQITDDTLMEESGKMIFLM 443
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 444 GLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKILRIDGTITHLLEREKRINLFQQN 503
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 504 KDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 563
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 564 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 604
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 605 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 638
>gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
Length = 1307
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 278/548 (50%), Gaps = 63/548 (11%)
Query: 137 LLEHQREGVKFLYK----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L +HQREGVKFLY+ + G I+ D+MGLGKT+QTI L + ++ I +
Sbjct: 261 LRDHQREGVKFLYECVMGMRCEGEGAIMADEMGLGKTLQTITLLWTLMKQN-----PIHE 315
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEACGVEVL 249
+ KK L++CP+ ++ NW+ EF +W V + +G ++ I V+
Sbjct: 316 SQPIVKKA--LVVCPAGLVDNWKREFRKWLGNERIGVFVANGKDKK-ITNFTMGKAYNVM 372
Query: 250 ITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R + + +IVI DE HRLK +K +A L T RI L+GT +QN
Sbjct: 373 IIGYEMLRTVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTPLQN 432
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ E Y D+V PG LG R F+ ++ P+ ++ A E + + R + LV++ +
Sbjct: 433 DLGEFYTAIDFVNPGLLGQRSAFKRTFEAPILRSRQPEASESELEKGEARWKELVSLTSR 492
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+++RRT E + + K +++VFC + Q AYR +L SP
Sbjct: 493 FMIRRTAE-VLSKYLPSKTEHIVFCKPTKAQAEAYRAILS-----------------SPF 534
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
V +D + L ++ L+++ N LIK D + +E+ A
Sbjct: 535 FSVAVGGNMD-----------MALQLIMVLKKVCNSPSLIKTTK----DGEATPSEMLQA 579
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS-WASKGDKILLFSYSVRMLDI 547
+ + LV + N S K+R L+ L++ + +KI++ S LD+
Sbjct: 580 L----LPLVPPHVLNSH-------ASSTKLRLLDSLVHRIHTTTEEKIVIVSNYTTTLDM 628
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANR 605
+E+ L+ Y++ RLDGSTPSN RQ+LV+ FN +P FL+S ++GG+GLNL+ A+R
Sbjct: 629 IERMLVSLSYTYLRLDGSTPSNKRQALVEKFNKTPKAASFAFLLSAKSGGVGLNLIGASR 688
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
+V+FD +WNPA DLQA R R GQK V ++R L G ++E +Y RQV K L+N V
Sbjct: 689 IVLFDIDWNPATDLQAMARIHRDGQKLPVKIYRFLVKGGIDEKIYQRQVMKMGLANAVVD 748
Query: 666 GKLEKRYF 673
K F
Sbjct: 749 NKASASSF 756
>gi|332263741|ref|XP_003280911.1| PREDICTED: DNA excision repair protein ERCC-6-like [Nomascus
leucogenys]
Length = 1250
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 195/634 (30%), Positives = 316/634 (49%), Gaps = 102/634 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 95 QLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 145
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF +W+ V +HGP++D L V+IT
Sbjct: 146 -----NHVLLIMPTNLINTWIKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGVIIT 200
Query: 252 SFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS E W+ VI+DEAH++K +K + + NR+ LTGT +
Sbjct: 201 TYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTGTPI 260
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+A+
Sbjct: 261 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAI 320
Query: 366 LRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKE + I + + K D +++ + LQ+
Sbjct: 321 IKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDIDAICEMPSLSRKNDLIIWIRLVPLQEEI 380
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C CL+ L+ S
Sbjct: 381 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLRTFS 431
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+ + +D+ PD+D + + + ++ GKM L
Sbjct: 432 A-----------QDGNEGEDS--------PDVDHI------DQITDDTLMEESGKMIFLM 466
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDFNSS 581
L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F +
Sbjct: 467 DLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQN 526
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
V +++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL++
Sbjct: 527 KDYSVLMLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLIT 586
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDNL 700
G++EE +Y RQV+K L K RYF Q+ +E L
Sbjct: 587 CGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------L 627
Query: 701 FTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
FT E +++ Q Q Q H + L+ HI
Sbjct: 628 FTIEDLQNSVTQLQLQSLHAAQRKSDTKLDEHIA 661
>gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus]
gi|81873794|sp|Q8BHK9.1|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency
complementation group 6 - like [Mus musculus]
gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency
complementation group 6 C-like [Mus musculus]
Length = 1240
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 304/593 (51%), Gaps = 88/593 (14%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYK+ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 96 KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 146
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF++W+ V +HG ++ L V+IT
Sbjct: 147 -----NHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVIT 201
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 202 TYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPV 261
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 262 QNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEI 321
Query: 366 LRKYLLRRTKEET-----------IGH------------LMMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +V+ + LQ+
Sbjct: 322 IKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEI 381
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 382 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACRLL----- 426
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+L + +DE ++Q + + S PD L ++ GKM L
Sbjct: 427 -NLGTATFSAQDE-NEQEDVSNMNSIDHLPDKTL---------------IQESGKMIFLM 469
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDDFNS 580
L+ +G + L+FS S+++L+I+E+ L K + R+DG T ++L R+ + F
Sbjct: 470 SLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDG-TVTHLWEREKRIQLFQQ 528
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 529 NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 588
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNL 692
+ G++EE +Y RQV+K L K RYF K+ ELF + +L
Sbjct: 589 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYF-----TKQELKELFTVGDL 636
>gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]
Length = 1240
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 304/593 (51%), Gaps = 88/593 (14%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYK+ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 96 KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 146
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF++W+ V +HG ++ L V+IT
Sbjct: 147 -----NHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVIT 201
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 202 TYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPV 261
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 262 QNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEI 321
Query: 366 LRKYLLRRTKEET-----------IGH------------LMMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +V+ + LQ+
Sbjct: 322 IKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEI 381
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 382 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACRLL----- 426
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+L + +DE ++Q + + S PD L ++ GKM L
Sbjct: 427 -NLGTATFSAQDE-NEQEDVSNMNSIDHLPDKTL---------------IQESGKMIFLM 469
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDDFNS 580
L+ +G + L+FS S+++L+I+E+ L K + R+DG T ++L R+ + F
Sbjct: 470 SLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDG-TVTHLWEREKRIQLFQQ 528
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 529 NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 588
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNL 692
+ G++EE +Y RQV+K L K RYF K+ ELF + +L
Sbjct: 589 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYF-----TKQELKELFTVGDL 636
>gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
Length = 680
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 287/566 (50%), Gaps = 69/566 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V AS+ L HQ++G+ FLY+ + G IL D+MGLGKT+Q I + +
Sbjct: 65 VVVDASLARCLRPHQQQGLVFLYECIMEMRPFDGGGAILADEMGLGKTLQCITLVWTLLR 124
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEK 240
+ +L+ ++II PSS+++NW EF +W N+ IY+ ++ +
Sbjct: 125 QGPYGGYPVLRR--------IIIITPSSLVKNWVKEFKKWLPNSNLRIYYVGQKNKVEGF 176
Query: 241 LEACGV-EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L + VLI S++ Y L+ +N++++I DEAHRLKN K+ + L +I
Sbjct: 177 LRQPSLYPVLILSYEMYLRVSDSLANINFDLLICDEAHRLKNANIKIAGSLQNLGITRKI 236
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREH---------FREFYDEPLKHGQRLTAPER 350
+TGT +QN + E + L D+ PG LG + FR Y+EP+ + A E
Sbjct: 237 LVTGTPVQNDLQEFFTLIDFCNPGILGKYPYVCQRIGPSSFRRVYEEPILQSRLPQATEE 296
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ R L + ++LRRT ++ + + GK + VVFC + LQ YR LL
Sbjct: 297 QKELGQARANELSRITALFVLRRT-QDVVQSYLPGKAECVVFCRPTSLQLTVYRELLASN 355
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
+Q ++ L C L C++ L+++ NH L+ P
Sbjct: 356 AVQACLSSYLSCDANHHLA------------------------CILALRKLCNHPSLVTP 391
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK------SCGKMRALEKL 524
F DL+ +Q + + +S + S GK++ L +
Sbjct: 392 RHMS-----------LWGCFRSSQDLLPTKSQKQFSLDMSKLAAESLEASSGKLKVLAAM 440
Query: 525 MYS-W-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
+ S W +S +KI++ S RML+++++ KGY+F RLDGST S R +V+ FNS+
Sbjct: 441 LASLWDSSPREKIVVVSNFTRMLNVVQELCACKGYTFVRLDGSTSSTQRLEIVERFNSAH 500
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
S VFL+S +AGG+GLNL+ A+R+V++D +WNPA DLQA R +R GQ RHV V+RL++
Sbjct: 501 SDCFVFLLSCKAGGVGLNLIGASRIVLYDVDWNPANDLQAMARVWRDGQGRHVYVYRLVT 560
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGK 667
G++EE +Y RQV K LS + K
Sbjct: 561 TGTVEEKIYQRQVMKLDLSRTVLEKK 586
>gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus]
Length = 1217
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 304/593 (51%), Gaps = 88/593 (14%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYK+ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 73 KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 123
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF++W+ V +HG ++ L V+IT
Sbjct: 124 -----NHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVIT 178
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 179 TYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPV 238
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 239 QNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEI 298
Query: 366 LRKYLLRRTKEET-----------IGH------------LMMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +V+ + LQ+
Sbjct: 299 IKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEI 358
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 359 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACRLL----- 403
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+L + +DE ++Q + + S PD L ++ GKM L
Sbjct: 404 -NLGTATFSAQDE-NEQEDVSNMNSIDHLPDKTL---------------IQESGKMIFLM 446
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDDFNS 580
L+ +G + L+FS S+++L+I+E+ L K + R+DG T ++L R+ + F
Sbjct: 447 SLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDG-TVTHLWEREKRIQLFQQ 505
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 506 NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 565
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNL 692
+ G++EE +Y RQV+K L K RYF K+ ELF + +L
Sbjct: 566 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYF-----TKQELKELFTVGDL 613
>gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864]
Length = 988
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 288/563 (51%), Gaps = 89/563 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKH-----GGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++ +L HQR+GV+FLY+ G IL D+MGLGKT+Q + L + +
Sbjct: 315 LSVQLRPHQRDGVRFLYECVTGMRTDAGFGAILADEMGLGKTLQCVTLLWTLLKQGPYMG 374
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
+ ++K L++CPSS+++NW+ EF +W TF VS + P+ +L+ +
Sbjct: 375 TALVK--------RALVVCPSSLVKNWQREFKKWLGDHRLQTFAVSAENRPDA-FLLQTV 425
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ V+I S++ R ++S+V ++IV DE HRLKNE +K+ A + L TR RI L
Sbjct: 426 ----IPVMIVSYEMLRQEIDVISKVPFDIVFCDEGHRLKNESAKISQALMSLSTRRRIIL 481
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + E ++L ++ PG +GT F+ Y+ P+ ++ A + + +R
Sbjct: 482 TGTPIQNDLQEFFSLLEFCNPGIVGTATTFKRIYENPIVASRQPEATQDEKLLGQQRASQ 541
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ-LPEIQCLINKDL 420
L + + LRRT + +L K + VVFC S LQ YR++LQ P C D
Sbjct: 542 LQQLTSLFCLRRTSDVNRQYL-PPKIEYVVFCEPSPLQLAIYRKVLQSAPLRSCF---DS 597
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
L + K++ C+S P L+ EL K +D
Sbjct: 598 SSRASQHLVAITSLKKI-----CNS-------PALIH--------ELAKNAEKD------ 631
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK--------- 531
++F IDL + ++F D GK R + + WA +
Sbjct: 632 -------SLFANTIDLFPDDFSPDTF----DAAHSGKQR----IFWMWALRCKMAALAQI 676
Query: 532 --------GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
D++++ S + LD LEK +SF+RLDGSTP+ RQ +V+ FNS S
Sbjct: 677 LCTIKRDTTDRVVIVSNYTQTLDHLEKLCAAYEFSFARLDGSTPTAKRQPIVEAFNSKYS 736
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
VFL+S++AGG+GLNLV A R+++ D +WNPA DLQA R +R GQ R V ++R+L
Sbjct: 737 TDYVFLLSSKAGGVGLNLVGACRLILVDTDWNPANDLQAMARVWRDGQTRTVHLYRMLLT 796
Query: 643 GSLEELVYTRQVYKQQLSNIAVS 665
GS++E +Y RQ+ KQ LS +AVS
Sbjct: 797 GSIDEKIYQRQLSKQGLS-VAVS 818
>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 204/651 (31%), Positives = 327/651 (50%), Gaps = 89/651 (13%)
Query: 54 RLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQ--FDHTG 111
RLG + + P +P E A V DD+ KE+ + K + + + H
Sbjct: 130 RLGTVF-VARPLHDPSG--EFAIVLYDPTVDDKPAPKEEVEPKLSQQDKKELEAPLVHKS 186
Query: 112 PFEPLVLSK--DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGIL 160
E L L K D E P +VP I+ RL + HQ EGVKFLY+ + +G I+
Sbjct: 187 LAEILGLKKKVDDERP--RVPVVIDPRLSKVLRPHQVEGVKFLYRATTGMIDPKANGCIM 244
Query: 161 GDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
D+MGLGKT+Q IA + + + ++ STI K +I CPSS+++NW E
Sbjct: 245 ADEMGLGKTLQCIALMWTLLKQSPDAGKSTIQK---------CVIACPSSLVRNWANELV 295
Query: 220 RW----STFNVSIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVN 267
+W + +I ++D +++++ + VLI S+++ R++ +
Sbjct: 296 KWLGPDAVTPFAIDGKASKDELIQQIRQWSIASGRSVVRPVLIVSYETLRLYVEEFGQTQ 355
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
+++ DE HRLKN S + A L + R+ L+GT +QN + E + L ++ P LGT
Sbjct: 356 IGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGT 415
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
R FR+ Y+ P+ G+ + ++ +ER L+ ++ K+++RRT + +L + K
Sbjct: 416 RMEFRKHYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIRRTNDILSKYLPV-KY 474
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
++VVFC ++ QK Y ++ P++Q L L G S P
Sbjct: 475 EHVVFCNLAPFQKELYNHFIKSPDVQSL------------------------LRGKGSQP 510
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L + L+++ NH +L++ P+D P + E D V +A+
Sbjct: 511 ----LKVIGMLKKLCNHPDLLE-LPQDLPGCEHTLPE----------DFVPKDARGRD-- 553
Query: 508 GLSDVKS--CGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
+VK GKM L++++ A DKI+L S + LDI +GY RLDG
Sbjct: 554 --REVKVWYSGKMLVLDRMLARIRAETNDKIVLISNYTQTLDIFAALCRSRGYGCLRLDG 611
Query: 565 STPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
+ + RQ LVD FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA
Sbjct: 612 TMNVSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALA 671
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
R +R GQK+ V+R ++ G++EE V+ RQ +KQ LS+ V S + +R+F
Sbjct: 672 RVWRDGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|440291244|gb|ELP84513.1| DNA repair and recombination protein RAD26, putative [Entamoeba
invadens IP1]
Length = 801
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 283/544 (52%), Gaps = 77/544 (14%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFL----AAVFGKDESSDSTILK 192
L EHQR GVK++Y+LYK GGI+GD+MGLGKT+ ++FL + ++ K S S +L
Sbjct: 126 LYEHQRVGVKWMYELYKQGGGGIVGDEMGLGKTLMVLSFLEGLHSTLYAKCTQSKSDVLT 185
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYH------GPNRDMILEKLEACG 245
+ G +LIICP ++I +W E R+ F V + H G + +L + C
Sbjct: 186 TRGEMRVGNILIICPLTLISHWVSEAHRFVPFFRVIVLHRALSSSGQDNLELLTQASNC- 244
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+ +T++D R + L+ V + I+DE H++KN KS + +A L++ NR+ L+G+
Sbjct: 245 --IFVTTYDFVRNKLNDLNRVTYLYTILDEGHKIKNPKSGISIAIKSLRSENRLILSGSP 302
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL++LFD+V PG LGT F++ + +P+K G +A A + + L
Sbjct: 303 IQNNLAELWSLFDFVYPGKLGTLPVFKQQFIDPIKFGSYTSASYFQFTAALKCAKALKDT 362
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
+ +LLRR K++ + L K +NVVF +S Q+ Y + + +IN D
Sbjct: 363 IAPFLLRRLKKDVLPTL-PNKTENVVFVKLSLKQRELYLEYINSFSVTKVINGDTN---- 417
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
+L + L+++ NH L+ N E D +
Sbjct: 418 -------------------------LLVAIDYLRKVCNHPLLLNKNV--EMDHE------ 444
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRML 545
+V K++ L L+ +W + K L+F + +ML
Sbjct: 445 -------------------------NVMESAKVKVLLSLLDNWRKEKHKALIFCQTKQML 479
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANR 605
+IL+K L Y F R+DG + R SL+D FN + F+++TR GGLG+NL A+R
Sbjct: 480 NILQKVLEYNKYIFLRMDGDVAAGKRSSLIDAFNHDDTINCFILTTRVGGLGINLTGADR 539
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
VV+FDP+WNP D QA++R+ R GQ ++V +++L+ +G++EE +Y RQ+ K+ +SN +S
Sbjct: 540 VVLFDPDWNPTVDSQAKERTLRIGQIKNVSIYKLICSGTIEERIYNRQISKEIISNKILS 599
Query: 666 GKLE 669
+ E
Sbjct: 600 DQNE 603
>gi|344301436|gb|EGW31748.1| hypothetical protein SPAPADRAFT_51729 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1050
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 283/534 (52%), Gaps = 76/534 (14%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + +K
Sbjct: 138 KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL---------RYIK--H 186
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLIT 251
+D G ++I P S + NW EF++W+ NV + G ++I ++L AC +VLIT
Sbjct: 187 ID--GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGNKEVRTEIIQDRLLACDFDVLIT 244
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S L + WE ++VDEAHR+KNE+S L +RNR+ +TGT +QN +
Sbjct: 245 SYEMVIREKSQLKKFKWEYIVVDEAHRIKNEESSLSQIIRLFYSRNRLLITGTPLQNNLH 304
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLL 371
EL+ L +++ P G E F +++D+ Q+ + R D+ Q L +L +LL
Sbjct: 305 ELWALLNFLLPDVFGDSEQFDDYFDQ-----QKDLDQDEKERKQDQAVQDLHQLLSPFLL 359
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K + L+ E N V+ MS++Q YR+LL+ KD+ G + +
Sbjct: 360 RRVKSDVETSLLPKIETN-VYIGMSEMQVDWYRKLLE---------KDIDAVNGV-VGKR 408
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
E RL N+ +++L++ NH L D +
Sbjct: 409 EGKTRLLNI--------------VMQLRKCCNHPYLF-------------DGAEPGPPYT 441
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D LV + GKM L+K++ + ++G ++L+FS R+LDILE +
Sbjct: 442 TDEHLVN---------------NSGKMIILDKMLKKFQAEGSRVLIFSQMSRLLDILEDY 486
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFD 610
I + Y + R+DGST R +D++N S++ +FL++TRAGGLG+NL SA+ V+++D
Sbjct: 487 CIFREYQYCRIDGSTSHEDRIDAIDNYNMPDSEKFIFLLTTRAGGLGINLTSADIVILYD 546
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L + +
Sbjct: 547 SDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVI 600
>gi|336364885|gb|EGN93238.1| hypothetical protein SERLA73DRAFT_172150 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377463|gb|EGO18625.1| hypothetical protein SERLADRAFT_454200 [Serpula lacrymans var.
lacrymans S7.9]
Length = 817
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 295/577 (51%), Gaps = 72/577 (12%)
Query: 120 KDGEYPIIQVPASINCRLLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIA 174
KD + P++ P + L HQ EGVKFLYK L +N++G I+ D+MGLGKT+Q IA
Sbjct: 208 KDTKVPVVIDP-RLTAVLRPHQVEGVKFLYKCTTGMLMENQYGCIMADEMGLGKTLQCIA 266
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYV---LIICPSSVIQNWEIEFSRW-STFNVSIYH 230
L T+LK + K V +I CPSS+++NW EF++W VSI
Sbjct: 267 LLW-----------TLLKQSPHPGKSSVEKCIIACPSSLVKNWANEFAKWLGKDAVSILA 315
Query: 231 GPNRDMILEKLEACG-----------VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
+ E LE G V+I S+++ R L+ + +++ DE HRL
Sbjct: 316 IDGKGGKAELLEKVGRWVTALGRNITQPVMIVSYETLRTLSVHLANCSIGLLLCDEGHRL 375
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
KN S + A L + R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ +
Sbjct: 376 KNSDSLTFQALNGLNVKRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNEFRKNFENAI 435
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
G+ A + ++++ + L ++ K+++RRT + +L + K + VVFC +SD Q
Sbjct: 436 IRGRDANAADAVKAASEKKLKELGGLVTKFIIRRTNDLLSKYLPV-KYEQVVFCGLSDFQ 494
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
YR + PEI+ L L G +S P L + L+
Sbjct: 495 LSLYRLFILSPEIKAL------------------------LRGAESQP----LKAINILK 526
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
++ NH EL+ D P+ R L F G + + + GK
Sbjct: 527 KLCNHPELL-----DLPNDLRGSENLIPEGFACAGTTTGRDRNKKQTV---RCDWSGKFL 578
Query: 520 ALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
LE+ ++ ++ DKI+L S + LD+ EK K Y F RLDG+ RQ LVD F
Sbjct: 579 VLERFLHQIRTQTTDKIVLISNYTQTLDLFEKLCRSKKYGFFRLDGTMTITKRQKLVDQF 638
Query: 579 NSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
N+ K+ +FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+
Sbjct: 639 NNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVY 698
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
R +S G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 699 RFISTGTIEEKIFQRQASKQALSSAVVDEKEDAERHF 735
>gi|452819764|gb|EME26817.1| chromatin remodeling complex SWI/SNF component, Snf2 [Galdieria
sulphuraria]
Length = 1502
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 296/551 (53%), Gaps = 87/551 (15%)
Query: 125 PIIQVPASINCRLL-EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
PI ++P + L ++Q +G+++L LY N GIL D+MGLGKTIQ IA LA + K
Sbjct: 777 PITELPTILQGGTLKQYQIQGLQWLVSLYVNHLNGILADEMGLGKTIQAIALLAYLVEKK 836
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR------DM 236
+S G LI+ P S + NWE+EF +W+ + +V ++ G + D
Sbjct: 837 NNS-------------GPFLIVVPLSTLSNWELEFEKWAPSLHVVVFKGDRKQRKSLYDT 883
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY-MACLELKT 295
+++ L V +T+F+ ++L +V W +IVDE HR+KN +S++ + + K+
Sbjct: 884 VIQPL---NFNVCLTTFEFVSRGKNLLGKVEWNYLIVDEGHRMKNHESRITAILSQQFKS 940
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQR--LTAPERF 351
R+R+ +TGT +QN + EL++L ++V P + E F ++ P G++ L+ E
Sbjct: 941 RSRLLMTGTPLQNSLSELWSLLNFVLPNIFSSSETFESWFAAPFASIPGEKADLSEEETL 1000
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETI--GHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+ I R+ H VLR +LLRR K + + G + K+++V+ C +S QK YRR+L+
Sbjct: 1001 LII---RRLH--QVLRPFLLRRLKSDVLRMGDQLPTKQEHVILCEISAWQKMVYRRILRG 1055
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
++ T + +R D L P + +L++++NH L
Sbjct: 1056 QKV--------------VFTGLSGRRRHDFLSN----------PAM-QLRKMANHPYLFY 1090
Query: 470 PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWA 529
+ +E L+ GN +E ++ GK + L+ +
Sbjct: 1091 EDYSEE--------------------LMLGNRDSEELF-----RASGKFYMFDMLLQKFL 1125
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFL 588
G ++L+F+ R++D+ E+ L +G +F RLDGST S +R+++V++FN S + V L
Sbjct: 1126 RTGHRVLVFNQMTRVIDLQERLLRFRGINFLRLDGSTKSEMRRNIVEEFNRSDTIYHVLL 1185
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
++TRAGGLG+NL SA+ V+IFD +WNP DLQAQDR+ R GQ + V+V R+++A ++EE
Sbjct: 1186 LTTRAGGLGVNLQSADTVIIFDSDWNPQMDLQAQDRAHRIGQDKEVLVLRIVAANTIEER 1245
Query: 649 VYTRQVYKQQL 659
+ R YK+ +
Sbjct: 1246 ILERASYKKDM 1256
>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
24927]
Length = 1390
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 293/575 (50%), Gaps = 74/575 (12%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDM 164
E L + K I +V I+ RL + HQ EGVKFLY+ + HG I+ D+M
Sbjct: 197 EILGIKKQDVSEIPRVAVVIDPRLAKVLRPHQIEGVKFLYRATTGLIDSKAHGCIMADEM 256
Query: 165 GLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-- 221
GLGKT+Q I + + + E+ TI K +I CPSS+++NW E +W
Sbjct: 257 GLGKTLQCITLMWTLLKQSPEAGRPTIRK---------CVIACPSSLVRNWANELVKWLG 307
Query: 222 --STFNVSIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIV 271
+ ++ ++ ++ +L+ + VLI S+++ R++ L ++
Sbjct: 308 EGTIHPFAVDGKATKEELISQLKQWAIASGNQVVRPVLIVSYETLRLYAKELGSTEIGLM 367
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
+ DE HRLKN +S + A EL + R+ L+GT +QN + E ++L ++ P LG+R F
Sbjct: 368 LCDEGHRLKNGESLTFTALTELNVKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSRADF 427
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R+ Y+ P+ G+ + E+ DER + L ++ K+++RRT + + + K ++VV
Sbjct: 428 RKKYEMPILRGRDANSDEKTREKGDERLKELFGLVNKFIIRRTN-DILSKYLPVKYEHVV 486
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
FC ++ Q+ Y + E++ L+ + + C PL + K+L
Sbjct: 487 FCGLAPFQRDLYNHFVTSSEVRKLL-RGVGC---KPLKAINVLKKL-------------- 528
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
NH +L+ + PD D + F D ++ ++ +
Sbjct: 529 ----------CNHPDLL-----ELPD----DLHGSEQFFPSDFVPKAARGRDGRYV---N 566
Query: 512 VKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
V GKM L++++ DKI+L S + LD+ EK KGY F RLDG+ N
Sbjct: 567 VCYSGKMLVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLARSKGYGFLRLDGTMNVNK 626
Query: 571 RQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
RQ LVD FN+ + +FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R G
Sbjct: 627 RQKLVDKFNNPDGDEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDG 686
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
QK+ V+R ++ G++EE ++ RQ +KQ LS+ V
Sbjct: 687 QKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 721
>gi|354493473|ref|XP_003508866.1| PREDICTED: DNA excision repair protein ERCC-6 [Cricetulus griseus]
gi|344257931|gb|EGW14035.1| DNA excision repair protein ERCC-6-like [Cricetulus griseus]
Length = 1249
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 317/635 (49%), Gaps = 102/635 (16%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYK+ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 99 KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 149
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
VL+I P+S+I W EF++W+ V +HG ++D L V+IT
Sbjct: 150 -----NRVLLIMPTSLINTWVKEFAKWTPGMRVKTFHGSSKDERTRNLTRIQQRNGVIIT 204
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + +R+ LTGT +
Sbjct: 205 TYQMLINNWQQLASFNGQEFVWDYVILDEAHKIKSASTKSAICARAVPASHRLLLTGTPI 264
Query: 307 QNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GSL GT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 265 QNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGLKISENLMEI 324
Query: 366 LRKYLLRRTKEET-----------IGHLMMG------------KEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE + +G K D +V+ + LQ+
Sbjct: 325 IKPYFLRRTKEEVQTKKADNPEAGLSEKNLGVEAICEMPSLTRKNDFIVWIRLVPLQEEI 384
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L + S C +L
Sbjct: 385 YRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARVCHLL---------- 429
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+L + +DE +++ PD+D + N + ++ GKM L
Sbjct: 430 -NLGTATFSVQDENEQE----------VAPDVDSIHHLTDN------ALMQESGKMIFLV 472
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDDFNS 580
L+ +G + L+FS S ++L+I+E+ L + + R+DG T ++L R+ + F
Sbjct: 473 ALLERLQDEGHQTLVFSQSRQILNIIERLLRNRHFKTLRIDG-TITHLWEREKRIQLFQQ 531
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 532 NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 591
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDN 699
+ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 592 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE------------------ 632
Query: 700 LFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT +++ Q Q Q H + + L+ HI
Sbjct: 633 LFTVGDLQNSATQMQLQSLHAAQRRSDEKLDEHIA 667
>gi|406604429|emb|CCH44088.1| chromatin-remodeling complex ATPase [Wickerhamomyces ciferrii]
Length = 965
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 303/599 (50%), Gaps = 94/599 (15%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ + P ++ +L E+Q +G+ +L +LY+N GIL D+MGLGKT+QTI+FL
Sbjct: 13 LTESPKYVHGKLREYQIQGLNWLIQLYENSLSGILADEMGLGKTLQTISFLG-------- 64
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMILEKL 241
L+ NK + G LII P S + NW EF RW+ NV + G D+I +
Sbjct: 65 ----YLRYNK-NIDGPFLIIVPKSTLDNWRREFERWTPDVNVCVLQGNKEERNDLIKNTI 119
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+VL+TSF+ S L ++ W+ ++VDEAHR+KNE+S L ++NR+ +
Sbjct: 120 LETKFDVLVTSFEMVIREKSALKKLAWQYIVVDEAHRIKNEESALSQIIRLFYSKNRLLI 179
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL+ L +++ P G E F +++ E + Q L Q
Sbjct: 180 TGTPLQNNLHELWALLNFILPDVFGDSEVFDQWF-ENQEDDQDLVI------------QQ 226
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L VL +LLRR K + L+ KE N ++ MS++Q + Y++LL+ KD+
Sbjct: 227 LHKVLNPFLLRRVKSDVEKSLLPKKEVN-LYVGMSEMQVKWYQKLLE---------KDID 276
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDK 478
G + + E RL N+ +++L++ NH E +P P
Sbjct: 277 AVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP------ 315
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
F D LV + GKM L+KL+ +G ++L+F
Sbjct: 316 ----------PFTTDEHLVF---------------NSGKMVILDKLLKKMKEQGSRVLIF 350
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLG 597
S R+LDILE + + Y + R+DGST R + +DD+N S K +FL++TRAGGLG
Sbjct: 351 SQMSRVLDILEDYCFFRDYEYCRIDGSTSHEDRIAAIDDYNKPDSDKFIFLLTTRAGGLG 410
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V+VFR ++ ++EE V R K
Sbjct: 411 INLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVMVFRFVTEDAIEEKVIERATQKL 470
Query: 658 QLSNIAVSGKLEKRYFEGVQDCKEFQGEL--FGICNLFRDLSDNLF--TSEIIESHEEQ 712
+L + + + + KE + FG N+F + S +L EI++ EE+
Sbjct: 471 RLDQLVIQQGRAVNKNSAIGNNKEDLLSMIQFGAKNVFENKSSSLEIDIDEILKKGEEK 529
>gi|325185489|emb|CCA19972.1| PREDICTED: similar to SWI/SNFrelated matrixassociated
actindependent regulator of chromatin a2 isoform b
isoform 10 putative [Albugo laibachii Nc14]
Length = 1295
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 285/554 (51%), Gaps = 85/554 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q G++++ LY N GIL D+MGLGKTIQTIA L + T ++ N
Sbjct: 479 LKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQTIALLTYI---------TEIRHN-- 527
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP---NRDMILEKLEACGVEVLITS 252
G L++ P S + NW IEF +W+ ++ +Y GP +++ +++ +C VL+T+
Sbjct: 528 --HGPFLVVVPLSTLSNWVIEFKKWAPKLSIVVYKGPPCVRKELFRQEMASCQFNVLLTT 585
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQNKIM 311
++ +L + W+ +IVDE HR+KN +SK M + ++RNR+ LTGT +QN +
Sbjct: 586 YEYTMKDKHVLRKYEWQYIIVDEGHRMKNAQSKFAMTLGTMYRSRNRLLLTGTPLQNSLP 645
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKH--------GQRLTAPERFIRIADERKQHLV 363
EL+ L +++ P + + F +++ +P L+ ER + I L
Sbjct: 646 ELWALLNFLLPTIFESVDTFEQWFSKPFSQFSGTGNDTQNDLSDEERMLII-----NRLH 700
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K + L K + V+ C +S QK YRR+ Q
Sbjct: 701 QVLRPFLLRRVKASVLDQL-PEKVERVLKCELSGWQKILYRRIQQ--------------- 744
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G+ L + E ++ F + L++L+++ NH L +P
Sbjct: 745 GGAILLEQEGNEK----SSKAKYTFKGLSNVLMQLRKVCNHPYLFQPQG----------- 789
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ D DL V+S GK L++++ + G ++L+FS +
Sbjct: 790 ------YPIDFDL---------------VRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQ 828
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++ ILE + + +++ RLDGST ++ R+ + FN+S S +FL+STRAGGLGLNL +
Sbjct: 829 LMHILEDYFQYRSFTYLRLDGSTSADEREQRMFMFNASDSPHFIFLLSTRAGGLGLNLAT 888
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+IFD +WNPA D QAQDR+ R GQK V VFRL++ +EE + +R K ++N+
Sbjct: 889 ADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATNKLNMNNL 948
Query: 663 AV-SGKLEKRYFEG 675
V +GK R E
Sbjct: 949 VVEAGKFNNRSKEA 962
>gi|345563719|gb|EGX46704.1| hypothetical protein AOL_s00097g452 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 291/573 (50%), Gaps = 70/573 (12%)
Query: 133 INCRLLEHQREGVKFLYKL------YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
I+ L HQREGV FLY+ Y+ + G IL D+MGLGKT+QTIA L
Sbjct: 268 ISRHLRPHQREGVSFLYEAVMGMRPYEGR-GAILADEMGLGKTLQTIALLW--------- 317
Query: 187 DSTILKDNKVDKKGYV----LIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKL 241
T+LK N + +G V +I+CP S+I NW EF +W + ++ + + +
Sbjct: 318 --TLLKQNPIYNQGPVVKKAMIVCPVSLINNWRREFKKWLGNERIHVFVADGKSNVRDFT 375
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+I ++ R L + +I+I DE HRLK ++K A L T R+ L
Sbjct: 376 HGPVYNVMIVGYERLRSIQDKLKQCQVDIIIADEGHRLKTAENKSAQAIRSLATPRRVVL 435
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + D+V PG L F++ ++ P+ Q+ A + + + RK
Sbjct: 436 SGTPLQNDLREFFVMADFVNPGILENYSTFKKQFENPIVKSQQPEALKADKELGNARKAS 495
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L ++ K++LRRT + + + K D V+FC + Q Y Q +IN +
Sbjct: 496 LAELMNKFVLRRT-AKILTKYLPPKTDVVLFCRPTKQQLELY---------QAIINTSV- 544
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+++ ++D L + L+++ N L+KP K+
Sbjct: 545 -----------AKRQMGSMDTA--------LQLITLLKKVCNSTSLLKPK-----GKEDD 580
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWA-SKGDKILLFSY 540
+A+L++++ + V G+A L + S GK++ LEKL+ + + +K++L S
Sbjct: 581 EAKLSNSIL--EEAKVAGSA-------LVNSNSSGKLKVLEKLLVTLKETTQEKVVLVSN 631
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN--SSPSKQVFLISTRAGGLGL 598
LDILE+ L KG+ RLDG TP+N RQ LVD FN SS FL+S+++GG GL
Sbjct: 632 YTSTLDILERMLNSKGFHHLRLDGKTPTNKRQDLVDKFNRVSSDVAFAFLLSSKSGGAGL 691
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ A+R+ +FD +WNPA DLQA R R GQK HV ++R+++ G ++E +Y RQ+ KQ
Sbjct: 692 NLIGASRLFLFDSDWNPATDLQAMARVHRDGQKSHVYIYRMITTGCIDEKIYQRQITKQG 751
Query: 659 LSNIAVSGKLEKRYFEGVQDCKEFQGELFGICN 691
L++ + K F + F + CN
Sbjct: 752 LADSVMDQKAGGSNFTSAELKDLFGLDTETTCN 784
>gi|344229696|gb|EGV61581.1| chromatin remodelling complex ATPase chain ISW1 [Candida tenuis
ATCC 10573]
Length = 1062
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 290/544 (53%), Gaps = 77/544 (14%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+++ P+ ++ +L ++Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL +
Sbjct: 139 MVETPSYVHGKLRDYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL------ 192
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKL 241
+K +D G ++I P S + NW EF++W+ NV + G D++ +L
Sbjct: 193 ---RYIK--HID--GPFVVIVPKSTLDNWRREFAKWTPEVNVVVLQGNKEQRTDIMQNQL 245
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+VL+TSF+ S L + WE ++VDEAHR+KNE+S L +RNR+ +
Sbjct: 246 LTAKFDVLVTSFEMVIREKSQLKKFKWEYIVVDEAHRIKNEESSLSQIIRLFYSRNRLLI 305
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL+ L +++ P G E F E++D + G+ PE + ++ H
Sbjct: 306 TGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFDN--QGGKE--NPESQDQDQVVQQLH 361
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
+L +LLRR K + L+ E N V+ M+D+Q++ YR+LL+ KD+
Sbjct: 362 --QLLSPFLLRRVKADVEKSLLPKIETN-VYIGMTDMQRKWYRQLLE---------KDID 409
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
G+ + + E RL N+ +++L++ NH L
Sbjct: 410 AVNGA-VGKREGKTRLLNI--------------VMQLRKCCNHPYLF------------- 441
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
D F D LV + GKM L+K++ + +G ++L+FS
Sbjct: 442 DGAEPGPPFTTDEHLVF---------------NAGKMIILDKMLSKFKREGSRVLIFSQM 486
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
R+LDILE + + Y++ R+DGST R +DD+N+ S++ +FL++TRAGGLG+NL
Sbjct: 487 SRLLDILEDYCFLREYNYCRIDGSTSHEERIQAIDDYNAPDSEKFIFLLTTRAGGLGINL 546
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ V+++D +WNP DLQA DR+ R GQK+ V VFR +S ++EE V R K +L
Sbjct: 547 TTADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVSENAIEEKVLERAAQKLRLD 606
Query: 661 NIAV 664
+ +
Sbjct: 607 QLVI 610
>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 291/559 (52%), Gaps = 69/559 (12%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-----GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
+L HQ++GV FLY+ G IL D+MGLGKT+Q I + +F + I
Sbjct: 127 KLRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGKTLQCITLVWTLFKQGPYGGKPI 186
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K VLI+ P S+++NW EF +W + +S++ + + E ++ V+
Sbjct: 187 IKR--------VLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFPVM 238
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+ S++ + + + +++V+ DE HRLKN K L R RI LTGT +QN
Sbjct: 239 VISYEMMVRYADDIRGITFDLVVCDEGHRLKNSTIKTASLLSSLAVRRRILLTGTPIQND 298
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E Y++ ++ PG LGT F Y+EP+ + +A + + R L + +
Sbjct: 299 LQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLGAARATELSRLTSLF 358
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP--CSCGSP 427
+LRRT+E +L K + VVFC S LQ R Y+ LL+ P I+ +++ S GSP
Sbjct: 359 VLRRTQEINNKYLP-PKVETVVFCKPSALQLRLYQHLLRSPLIRSCLSRGYASSASAGSP 417
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR--DEPDKQRKDAEL 485
L C+ L+++ N L+ R DE K+R
Sbjct: 418 H-----------------------LVCIGALKKLCNDPSLLYQASRKADEEGKRR----- 449
Query: 486 ASAVFGPDIDLVGGNAQNESFI-------------GLSDVKSCGKMRALEKL---MYSWA 529
G + L+ + + ES G + CGK+ L ++ M++
Sbjct: 450 -----GGESWLLDHDDEEESLYKGLLPIYPPDYSEGRPLLAHCGKLCVLSEMLRAMHADP 504
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFL 588
++ ++++L S + LDIL+ +GY F RLDGSTP+ RQS+V+ FNSS +K+ +FL
Sbjct: 505 TRRERLVLVSNYTQTLDILQALCSIEGYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFL 564
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
+S++AGG+GLNL+ A+R++++D +WNPA DLQA R +R GQK+ V ++RL++AG++EE
Sbjct: 565 LSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKKTVHIYRLITAGTIEEK 624
Query: 649 VYTRQVYKQQLSNIAVSGK 667
+Y RQ+ KQ LS V K
Sbjct: 625 IYQRQISKQSLSGAVVDAK 643
>gi|384254120|gb|EIE27594.1| hypothetical protein COCSUDRAFT_34894 [Coccomyxa subellipsoidea
C-169]
Length = 735
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 269/521 (51%), Gaps = 84/521 (16%)
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-S 222
MGLGKT+Q FLA + S +I+CP++V++ W E W
Sbjct: 1 MGLGKTVQLAVFLAGLHHSGRFRPS--------------IIVCPATVLRQWLRELRLWYP 46
Query: 223 TFNVSIYHG---------PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIV 273
F V + H P+R +++ ++ +L+TS+D R+ S L VNW I+
Sbjct: 47 PFRVIVLHESQRSGNAPRPSRQKLVQLVKNSQAGILLTSYDQLRLQRSELLAVNWGYAIL 106
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DE H+++N +++ + +L T +RI ++G+ +QN + EL++LFD+V PG LGT FR
Sbjct: 107 DEGHKIRNPDAEITLVAKQLATVHRIIMSGSPIQNHLTELWSLFDFVFPGKLGTLPVFRA 166
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+ P++ G A + A + L ++ YLLRR K + + + K + V+FC
Sbjct: 167 QFALPIQIGGYANASAMQVSTAFKCAVVLRDLIAPYLLRRRKAD-VAQQLPKKTEQVLFC 225
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
+++ Q+ YR L E+Q ++N R + L G D
Sbjct: 226 SLTTDQRDLYRSYLASDEVQDILND-----------------RRNALAGIDI-------- 260
Query: 454 CLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
L++I NH +L+ QR+ Q ES D
Sbjct: 261 ----LRKICNHPDLL----------QRR--------------------QWESTEKYGDPV 286
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
GK+ K++ W +G K L F+ + +MLDI+E+ + G+ + R+DGST R
Sbjct: 287 RSGKLVVALKVLQHWKQQGHKALFFTQTQQMLDIVERAVQAAGFRYHRMDGSTAVGARAR 346
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
LVDDFN + VFL++T+ GGLG+NL A+RV+++DP+WNP+ D+QA++R++R GQKR
Sbjct: 347 LVDDFNGNEQVFVFLLTTKVGGLGINLTGADRVLLYDPDWNPSTDMQARERAWRIGQKRE 406
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
V ++RL+++G++EE VY RQ+YKQ L+ + +KR+F+
Sbjct: 407 VTIYRLITSGTIEEKVYHRQIYKQFLTEKVLQDPKQKRFFK 447
>gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma
brucei gambiense DAL972]
Length = 1037
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 281/543 (51%), Gaps = 71/543 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQR GVKFL+ + HG IL D+MGLGKTIQT+A + +
Sbjct: 360 IGDKLRPHQRIGVKFLFDCITGQRMPGYHGAILADEMGLGKTIQTVATVYTCLKQGRYGV 419
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY-----HGPNRDMILEKLE 242
T K LI+ PSS+++NW EF +W Y P D I+ + +
Sbjct: 420 PTARK---------CLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISESTPKGDRIISRFD 470
Query: 243 ACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G +VL+ S+D R + S +S + + E+V+ DE H+LKN + K A L TRNRI L
Sbjct: 471 GDG-DVLVISYDQLRKYISRISTLKSVELVVCDEGHKLKNAEVKTTKAVDMLPTRNRIIL 529
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + +V PG LGTR+ F ++EP+ G+ PE + +R +
Sbjct: 530 SGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDCPEHLRMLGADRAHY 589
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++++LRRT+ +L K D VF + + Q+ AY ++ +
Sbjct: 590 LSTLTQRFILRRTQSINESYL-PPKVDLTVFVRLGEKQREAYEKISAI------------ 636
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQR 480
VE + C L + L+++ NH++L + D++
Sbjct: 637 ---------VESSQ-------------CTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKG 674
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--DKILLF 538
K + +V P VG +Q +V S KM+ + ++ S G DK+++
Sbjct: 675 KGGGIPKSVL-PKGYKVGTLSQ--------EVGS--KMQFVSLMLDELCSNGDHDKLVIV 723
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S + LD++ K SF +LDGS P RQ +VD FN S++ VFL+S++AGG+G
Sbjct: 724 SNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVG 783
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS GS+EE +Y RQV KQ
Sbjct: 784 LNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQ 843
Query: 658 QLS 660
LS
Sbjct: 844 GLS 846
>gi|367026656|ref|XP_003662612.1| hypothetical protein MYCTH_2303435 [Myceliophthora thermophila ATCC
42464]
gi|347009881|gb|AEO57367.1| hypothetical protein MYCTH_2303435 [Myceliophthora thermophila ATCC
42464]
Length = 734
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 252/492 (51%), Gaps = 92/492 (18%)
Query: 202 VLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM------------------------ 236
V+++ P++V++ W EF RW VSI H M
Sbjct: 6 VIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMFNVRDEGEIEDHVDDWEEKKPRKS 65
Query: 237 ------ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
I++++ G VL+T++ + +G +L V+W ++DE H+++N + + + C
Sbjct: 66 SAAARKIVDRVVKQG-HVLVTTYAGLQTYGDVLIPVDWGYAVLDEGHKIRNPNTAITIYC 124
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
EL+T NRI L+GT MQN + EL++LFD+V P LGT FR ++ P++ G A
Sbjct: 125 KELRTHNRIILSGTPMQNNLTELWSLFDFVYPMRLGTLVAFRNQFEIPIRLGGYANATNL 184
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
I A + + L + YLL+R K + L K + V+FC +S Q+ AY L+
Sbjct: 185 QIMTAQKCAETLKDAISPYLLQRLKVDVAADLPR-KSEQVLFCKLSQSQREAYELFLKSE 243
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
E+ ++N+ +L G D L++I NH +L+ P
Sbjct: 244 EMAAILNRTR-----------------QSLYGIDI------------LRKICNHPDLLDP 274
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ +P + D D KS GKM ++ L+ W
Sbjct: 275 RLKGKPGYKWGD----------------------------DSKS-GKMAVVKSLLPMWKR 305
Query: 531 KGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLI 589
G K LLF V+MLDI+E F+ R + R+DG TP RQ LVD FN+ P VFL+
Sbjct: 306 LGHKTLLFCQGVQMLDIIEAFVQRLDNIKYLRMDGKTPVKQRQLLVDQFNNDPELDVFLL 365
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
+T+ GGLG+NL ANRV+IFDP+WNP+ D+QA++R++R GQKR V ++RL++AG++EE +
Sbjct: 366 TTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKI 425
Query: 650 YTRQVYKQQLSN 661
Y RQ++KQ LSN
Sbjct: 426 YHRQIFKQFLSN 437
>gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927]
gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1037
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 280/543 (51%), Gaps = 71/543 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQR GVKFL+ + HG IL D+MGLGKTIQT+A + +
Sbjct: 360 IGDKLRPHQRIGVKFLFDCITGQRMPGYHGAILADEMGLGKTIQTVATVYTCLKQGRYGV 419
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY-----HGPNRDMILEKLE 242
T K LI+ PSS+++NW EF +W Y P D I+ + +
Sbjct: 420 PTARK---------CLIVTPSSLVKNWCNEFDKWLGVGAVKYLSISESTPKGDRIISRFD 470
Query: 243 ACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
G +VL+ S+D R + S +S + + E+V+ DE H+LKN + K A L TRNRI L
Sbjct: 471 GDG-DVLVISYDQLRKYISRISTLKSVELVVCDEGHKLKNAEVKTTKAVDMLPTRNRIIL 529
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + +V PG LGTR+ F ++EP+ G+ PE + +R +
Sbjct: 530 SGTPIQNDLSEFHAMVGFVNPGILGTRDVFGRVFEEPVTLGRDPDCPEHLRMLGADRAHY 589
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++++LRRT+ +L K D VF + + Q+ AY ++ +
Sbjct: 590 LSTLTQRFILRRTQSINESYL-PPKVDLTVFVRLGEKQREAYEKISAI------------ 636
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQR 480
VE + C L + L+++ NH++L + D++
Sbjct: 637 ---------VESSQ-------------CTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKG 674
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--DKILLF 538
K + +V P VG +Q +G KM+ + ++ S G DK+++
Sbjct: 675 KGGGIPKSVL-PKGYKVGTLSQE---VG-------SKMQFVSLMLDELCSNGDHDKLVIV 723
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S + LD++ K SF +LDGS P RQ +VD FN S++ VFL+S++AGG+G
Sbjct: 724 SNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVG 783
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS GS+EE +Y RQV KQ
Sbjct: 784 LNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQ 843
Query: 658 QLS 660
LS
Sbjct: 844 GLS 846
>gi|345325793|ref|XP_001505482.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 1292
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 291/576 (50%), Gaps = 81/576 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQREGV FLY L+++ K GGIL DDMGLGKTIQ IAFL+ +F D+ ++
Sbjct: 93 LHHQLFEHQREGVAFLYSLFRDGKKGGILADDMGLGKTIQIIAFLSGMF------DAELV 146
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEAC--GVEV 248
YVL++ P+++I W EF++W+ V +HG ++ + LE V
Sbjct: 147 N--------YVLLVMPTTLISTWTREFAKWTPGIRVKNFHGASKTERTKNLERIQRKTGV 198
Query: 249 LITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS +N W+ +I DEAH++K SK + + NRI LTG
Sbjct: 199 IITTYQMLINNWQQLSSLNGREFVWDYLIFDEAHKIKTSASKTAICARSIPAHNRILLTG 258
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD GS LGT F+ Y+ P+ + A + + ++L
Sbjct: 259 TPVQNNLQELWSLFDVACQGSLLGTSTTFKMEYENPITRAREKDATPGEKALGFKISENL 318
Query: 363 VAVLRKYLLRRTKEETIGHL-----------------------MMGKEDNVVFCTMSDLQ 399
+ +++ + LRRTKE+ + K D +++ ++ LQ
Sbjct: 319 MTIIKPHFLRRTKEDVQKRTASQPKSNLSEKSQDDDLAPEMPSLSRKNDFIIWVRLTSLQ 378
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 379 EDIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACTL--- 425
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
L L D+ D+ D DI+ + G +++ + + GK+
Sbjct: 426 -----LGLEGGGFSDQ-DENGTD-------HYSDINRI-GQLPDQTLM-----EESGKLM 466
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS-NLRQSLVDDF 578
L L+ +G + L+FS S +MLDI+E+ L + R+DG+ R+ + F
Sbjct: 467 FLMALLKRLQREGHQTLVFSQSRKMLDIIERLLTNTHFKILRVDGTIAQLGEREKRISLF 526
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR++R GQK +V+++R
Sbjct: 527 QKNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYR 586
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYF 673
L++ G++EE +Y RQV+K L K RYF
Sbjct: 587 LITCGTVEEKIYRRQVFKDSLVRQTTGDKKNPFRYF 622
>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
Length = 812
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 198/621 (31%), Positives = 318/621 (51%), Gaps = 86/621 (13%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQ--FDHTGPFEPLVLSK--DGEYPIIQVPASINCRLLE 139
DD+ KE+ + K + + + + H E L L K +GE P +VP I+ RL +
Sbjct: 157 DDKPIPKEEIEPKLSQPEKKELEAPLVHKSLAEILGLKKKVEGERP--RVPVVIDPRLAK 214
Query: 140 ----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDST 189
HQ EGVKFLY+ + +G I+ D+MGLGKT+Q IA + + + E+ ST
Sbjct: 215 VLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMWTLLKQSPEAGKST 274
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLEACG 245
I K +I CPSS+++NW E +W + +I +++ +++++
Sbjct: 275 IQK---------CVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWS 325
Query: 246 VE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ VLI S+++ R++ + +++ DE HRLKN S + A L +
Sbjct: 326 IASGRAVVRPVLIVSYETLRLYAEEFGQTPIGLMLCDEGHRLKNGDSLTFTALNNLNVQR 385
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ L+GT +QN + E + L ++ P LGTR FR+ Y+ P+ G+ + ++ E
Sbjct: 386 RVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIPILKGRDANGTDEDVKKGTE 445
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
R L+ ++ K+++RRT + +L + K ++VVFC ++ QK Y ++ P++Q L
Sbjct: 446 RLTELLGLVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQKDLYNHFIKSPDVQSL-- 502
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
L G S P L + L+++ NH +L+ P D P
Sbjct: 503 ----------------------LRGKGSQP----LKVIGMLKKLCNHPDLLN-LPEDLPG 535
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKGDK 534
+ PD D V +A+ +VK+ GKM L++++ A DK
Sbjct: 536 CENT---------LPD-DFVQKDARGRD----REVKTWYSGKMAVLDRMLARIRAETNDK 581
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
I+L S + LDI +GY RLDG+ + RQ LVD FN S + VFL+S++A
Sbjct: 582 IVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSKA 641
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE V+ RQ
Sbjct: 642 GGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQRQ 701
Query: 654 VYKQQLSNIAV-SGKLEKRYF 673
+KQ LS+ V S + +R+F
Sbjct: 702 SHKQSLSSCVVDSAEDVERHF 722
>gi|168023352|ref|XP_001764202.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
gi|162684642|gb|EDQ71043.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
Length = 802
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 277/557 (49%), Gaps = 119/557 (21%)
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-S 222
MGLGKTIQ + FLA + + S +++CP ++++ W+ E +W
Sbjct: 1 MGLGKTIQVLVFLAGLHNSGMYTPS--------------IVVCPVTLLRQWKREAKKWYP 46
Query: 223 TFNVSIYHG---------------PNR-----------------------------DMIL 238
FNV I H P R D ++
Sbjct: 47 AFNVEILHDSAVASQKSSNKKKRKPKRGSDEEFDEEESDYSENEQEKPVKVKKDRWDGMI 106
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+++ +++T+++ RI L ++NW I+DE HR++N + + C +L+T +R
Sbjct: 107 DRVVDSSDGIILTTYEQLRIVRDKLLDINWGYAILDEGHRIRNPDAGTTLICKQLQTVHR 166
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I +TG +QN++ EL++LFD+V PG LG F+ + P+ G A + A
Sbjct: 167 IIMTGAPIQNRLTELWSLFDFVFPGKLGVLPVFQAQFSLPIAIGGYSNATPLQVSTAYRC 226
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ YLLRR K + HL K ++V+FC+++ Q+ AYR L E++ +
Sbjct: 227 AVVLRDLIMPYLLRRMKSDVDAHLPK-KTEHVLFCSLTKDQRSAYRAFLASSEVEQI--- 282
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
DG + F + + L++I NH +L+
Sbjct: 283 ---------------------FDGNRNSLFGIDI-----LRKICNHPDLL---------- 306
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
E + PD +++ GK++ L +++ W ++G ++LLF
Sbjct: 307 -----EREHSAGHPD---------------YGNIERSGKLKVLAQVLELWKTQGHRVLLF 346
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGL 598
+ + +MLDI+E ++ KGY + R+DG+TP R L+D+FN +F+++T+ GGLG
Sbjct: 347 TQTQQMLDIVENYVTSKGYVYRRMDGNTPVKQRMQLIDEFNEGDHVFIFILTTKVGGLGT 406
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANRVVIFDP+WNP+ D+QA++R++R GQK+ V+++RL++ G++EE VY RQ+YK
Sbjct: 407 NLIGANRVVIFDPDWNPSTDMQARERAWRIGQKKEVVIYRLITRGTIEEKVYHRQIYKHF 466
Query: 659 LSNIAVSGKLEKRYFEG 675
L+N + ++R+F+
Sbjct: 467 LTNKILRDPQQRRFFKA 483
>gi|52076609|dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group]
Length = 789
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 284/555 (51%), Gaps = 111/555 (20%)
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-S 222
MGLGKT+Q ++FL ++ +S + K + +++CP +++Q W E SRW
Sbjct: 1 MGLGKTVQVLSFLGSLH------NSGLYKPS--------IVVCPVTLLQQWRREASRWYP 46
Query: 223 TFNVSIYH-----------------------------------GPNRDMILEKLEACGVE 247
F V I H D ++ ++ + G
Sbjct: 47 KFKVEILHDSANSSSKKSKRSSDSDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSSGSG 106
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+L+T+++ RI G L ++ W ++DE HR++N +++ + C +L+T +RI +TG +Q
Sbjct: 107 LLLTTYEQLRILGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQ 166
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
NK+ EL++LFD+V PG LG F + P+ G A + A L ++
Sbjct: 167 NKLSELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVM 226
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
YLLRR K + L K ++V+FC+++ Q+ YR L E++ + + +
Sbjct: 227 PYLLRRMKADVNAQLPK-KTEHVLFCSLTTEQRATYRAFLASSEVEQIFDGNR------- 278
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
++L G D L++I NH +L+ +R+ A
Sbjct: 279 ----------NSLYGIDV------------LRKICNHPDLL----------EREHA---- 302
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
AQN + + + GKM+ +E+++ W +G ++LLF+ + +MLDI
Sbjct: 303 -------------AQNPDY---GNPERSGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDI 346
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
+E FL Y + R+DG TP+ R +L+D+FN++ +F+++T+ GGLG NL ANR++
Sbjct: 347 MENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRII 406
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
I+DP+WNP+ D+QA++R++R GQ R V V+RL++ G++EE VY RQ+YK L+N +
Sbjct: 407 IYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKDP 466
Query: 668 LEKRYFEGVQDCKEF 682
++R+F+ +D K+
Sbjct: 467 QQRRFFKA-RDMKDL 480
>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Meleagris gallopavo]
Length = 918
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 286/537 (53%), Gaps = 48/537 (8%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +L
Sbjct: 303 LRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVL 362
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S+++NW+ EF +W + + ++ + E + + V+I
Sbjct: 363 KR--------ALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMI 414
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + ++ + ++I DE HRLKN K A L RI LTGT +QN +
Sbjct: 415 ISYEMLLRSLDQIQDIEFNLLICDEGHRLKNSSIKTTTALTSLSCERRIILTGTPIQNDL 474
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E Y L ++V PG LG+ +R+ Y+EP+ + +A + + ++R L + ++
Sbjct: 475 QEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFV 534
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K++N++FC + LQ YR+LL I +
Sbjct: 535 LRRT-QEVIDKFLPPKKENIIFCQPTALQLELYRKLLSSRVITSCLQG------------ 581
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
RL+N P L C+ L+++ NH L+ +++ + D + S+++
Sbjct: 582 -----RLEN------SPH---LICIGALKKLCNHPCLLFKAVKEKSCDPKSDEHVESSLY 627
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGDKILLFSYSVRMLDIL 548
D+ + ++ F S+ S GK++ L KL+ + S ++++L S + L+IL
Sbjct: 628 EGLTDVFPQDYTSDIF---SETDS-GKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNIL 683
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
++ R GYS++RLDG+TP + RQ +VD FN S +FL+S++AGG+GLNLV A+ ++
Sbjct: 684 QETCKRYGYSYTRLDGNTPVSQRQQIVDSFNCKFSPAFIFLLSSKAGGVGLNLVGASHLI 743
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNPA D+QA R +R GQK V ++RLL+ GS+EE +Y RQ+ KQ LS V
Sbjct: 744 LYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVV 800
>gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex]
Length = 1001
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 287/548 (52%), Gaps = 58/548 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V +++ L HQREGV F+Y+ N +G IL D+MGLGKT+Q I + +
Sbjct: 421 VVVDPTLSKNLRPHQREGVVFMYECLMGFKTPNMYGAILADEMGLGKTLQCITLIWILLQ 480
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEK 240
+ + I++ VLI+ PSS+++NWE EF RW ++++ ++ +E
Sbjct: 481 QGPYNGRPIIQ--------RVLIVTPSSLVKNWEKEFRRWLGRERITVFTADQQNRPIEF 532
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
L+ V++ S++ + ++N+++V+ DE HRLKN +K +L T ++
Sbjct: 533 LKHLVSPVMVVSYEMLVRCFDEIQQINFDMVVCDEGHRLKNAGNKTSSLLSQLDTNRKVL 592
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QN + E ++L D+V PG LG+ FR Y+EP+ Q+ E + +
Sbjct: 593 LTGTPVQNDLKEFFSLADFVNPGILGSLSSFRRTYEEPIVALQQPECDEDQRELGESCAS 652
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + +++LRRT+E HL K ++V+FC + +Q YR +L ++ +++
Sbjct: 653 ELSHLTSQFVLRRTQEVMNAHL-PPKVESVIFCKPTCVQVNLYRNVLDSSAVRSILSS-- 709
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
TQ G D F L L+++ NH L K
Sbjct: 710 --------TQT----------GNDQLSFILA------LRKLCNHPTLFAAT-----RKHA 740
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ +EL + D + + F+ + L+ LM + +KI+L SY
Sbjct: 741 ECSELWQENYKEDSSQIQSRDASGKFVVTFAI--------LDSLM---KNTKEKIILVSY 789
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLN 599
S +MLD+ + + YSF RLDGSTP+N R +VD FN + +VFL+S++AGG+GLN
Sbjct: 790 STKMLDLFGESCTERKYSFVRLDGSTPTNTRMGIVDRFNDPQGADRVFLLSSKAGGVGLN 849
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ A+R++++D +WNPA D+QA R +R GQKR V ++RLL+ G++EE ++ RQ+ KQ L
Sbjct: 850 LIGASRLILYDIDWNPANDMQAMARIWREGQKRTVQIYRLLTTGTIEEKIFQRQILKQGL 909
Query: 660 SNIAVSGK 667
S V +
Sbjct: 910 SGAIVDAR 917
>gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 277/552 (50%), Gaps = 72/552 (13%)
Query: 137 LLEHQREGVKFLYKLYKN----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L EHQR+GV+FLY+ G I+ D+MGLGKT+QTIA L T++K
Sbjct: 247 LREHQRDGVQFLYECVMGMRCEGEGAIMADEMGLGKTLQTIALLW-----------TLMK 295
Query: 193 DNKVDKKGYV----LIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEACG 245
N + V LI+CP+ ++ NW+ EF +W V + N+ I
Sbjct: 296 QNPIHGASPVIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKK-IANFTMGKS 354
Query: 246 VEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+LI ++ R++ L + +IVI DE HRLK +K +A L T RI L+GT
Sbjct: 355 YNILIVGYEMLRVYQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGT 414
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E Y D+V PG LG R F+ ++ P+ ++ A E + + R + LV+
Sbjct: 415 PLQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESELEKGEARWKELVS 474
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
+ ++++RRT E + + K +++VFC + Q AYR +L P + + S
Sbjct: 475 LTSRFMIRRT-AEVLSKYLPPKTEHIVFCRPTKGQAEAYRAILDSPTFRLAMG-----SS 528
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
L + K++ C+S P L+K + D +E
Sbjct: 529 DIALQLINVLKKI-----CNS-------PSLLKSSK----------------DNDDTPSE 560
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS-WASKGDKILLFSYSVR 543
+ ++ + L+ N N S S K+R L+ L++ + + +KI++ S
Sbjct: 561 MLQSI----LPLIPNNILNSS-------ASSAKLRLLDSLVHRIYTTTEEKIVIVSNYTT 609
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLV 601
LD++E+ L+ Y++ RLDGSTP++ RQ+LV+ FN +P FL+S ++GG+GLNL+
Sbjct: 610 TLDMIERLLVSLSYTYLRLDGSTPASKRQALVEKFNKTPKTTSFAFLLSAKSGGVGLNLI 669
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R+V+FD +WNPA DLQA R R GQK V+R L G L+E +Y RQ+ K L+N
Sbjct: 670 GASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLAN 729
Query: 662 IAVSGKLEKRYF 673
V K F
Sbjct: 730 AVVDNKASASSF 741
>gi|432908561|ref|XP_004077922.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oryzias latipes]
Length = 928
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 289/565 (51%), Gaps = 68/565 (12%)
Query: 118 LSKDGEYPIIQVPAS--INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTI 170
L P+++V + L HQR+G+ FLY+ +G IL D+MGLGKT+
Sbjct: 303 LHNKAALPVVEVVVDPHLTQHLRPHQRDGLLFLYECVMGMRVASCYGAILADEMGLGKTL 362
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STF 224
Q++A + + + K VL++ P S++QNW+ EF++W S F
Sbjct: 363 QSVALSWTLLKQGPYGGKPVAK--------RVLVVTPGSLVQNWKAEFNKWLGRERISVF 414
Query: 225 NVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKS 284
V H + +L L + VL+ S++ + +V + ++I DE HRLKN
Sbjct: 415 TVDQDHRIEQ-FVLSPLHS----VLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSI 469
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
K A L R+ LTGT +QN + E + + ++V PG LG+ +R+ Y+EP+ ++
Sbjct: 470 KTSSALTSLSCDRRVILTGTPVQNDLQEFHAIIEFVNPGILGSPTAYRKLYEEPILRSRQ 529
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
+ E + +ER L + ++LRRT +E I + + D +FC S LQ+ Y+
Sbjct: 530 PSCTEEERVLGEERAAELSRLTGMFILRRT-QEIINRYLPPRVDWTLFCEPSALQQELYQ 588
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL--DNLDGCDSCPFCLVLPCLVKLQQIS 462
RLL C R+ D + G S L C+ L+++
Sbjct: 589 RLL--------------------------CHRVFRDCMQG--STQTSTHLACITALKKLC 620
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
NH L+ ++ + + L S+++ DL + S G + S GK+ L
Sbjct: 621 NHPGLLYATVKE----RTESGTLESSLYERLADLF---PETYSLAGFNTADS-GKLLVLS 672
Query: 523 KLMYS--WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS 580
L+ + S D+++L S + LD+L+ GY+F RLDG TP+ RQ LVD FNS
Sbjct: 673 DLLAAIRQLSPSDRVVLVSNYTQTLDLLQDLCKHMGYTFCRLDGQTPTGQRQRLVDGFNS 732
Query: 581 SPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
S S+ +FL+S++AGG+GLNL+ A+ +V++D +WNPA D+QA R +R GQK+ V ++RL
Sbjct: 733 SYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRL 792
Query: 640 LSAGSLEELVYTRQVYKQQLSNIAV 664
L+AG++EE +Y RQV KQ LS V
Sbjct: 793 LTAGTIEERIYQRQVSKQGLSGTVV 817
>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
[Strongylocentrotus purpuratus]
Length = 629
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 291/559 (52%), Gaps = 69/559 (12%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-----GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
+L HQ++GV FLY+ G IL D+MGLGKT+Q I + +F + I
Sbjct: 51 KLRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGKTLQCITLVWTLFKQGPYGGKPI 110
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K VLI+ P S+++NW EF +W + +S++ + + E ++ V+
Sbjct: 111 IKR--------VLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVEEFKKSPLFPVM 162
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+ S++ + + + +++V+ DE HRLKN K L R RI LTGT +QN
Sbjct: 163 VISYEMMVRYADDIRGITFDLVVCDEGHRLKNSTIKTASLLSSLAVRRRILLTGTPIQND 222
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E Y++ ++ PG LGT F Y+EP+ + +A + + R L + +
Sbjct: 223 LQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLGAARATELSRLTSLF 282
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP--CSCGSP 427
+LRRT+E +L K + VVFC S LQ R Y+ LL+ P I+ +++ S GSP
Sbjct: 283 VLRRTQEINNKYLP-PKVETVVFCKPSALQLRLYQHLLRSPLIRSCLSRGYASSASAGSP 341
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR--DEPDKQRKDAEL 485
L C+ L+++ N L+ R DE K+R
Sbjct: 342 H-----------------------LVCIGALKKLCNDPSLLYQASRKADEEGKRR----- 373
Query: 486 ASAVFGPDIDLVGGNAQNESFI-------------GLSDVKSCGKMRALEKL---MYSWA 529
G + L+ + + ES G + CGK+ L ++ M++
Sbjct: 374 -----GGESWLLDHDDEEESLYKGLLPIYPPEYTEGRPLLAHCGKLCVLSEMLRAMHADP 428
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFL 588
++ ++++L S + LDIL+ +GY F RLDGSTP+ RQS+V+ FNSS +K+ +FL
Sbjct: 429 TRRERLVLVSNYTQTLDILQALCSIEGYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFL 488
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
+S++AGG+GLNL+ A+R++++D +WNPA DLQA R +R GQK+ V ++RL++AG++EE
Sbjct: 489 LSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKKTVYIYRLITAGTIEEK 548
Query: 649 VYTRQVYKQQLSNIAVSGK 667
+Y RQ+ KQ LS V K
Sbjct: 549 IYQRQISKQSLSGAVVDAK 567
>gi|392595792|gb|EIW85115.1| DNA repair protein, SNF2 family [Coniophora puteana RWD-64-598 SS2]
Length = 811
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 317/620 (51%), Gaps = 80/620 (12%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEP-----LVLSKDGEYPII-QVPASINCRL 137
D++ +E+ +E+ + Q + Q G + P +L +D + +VP I+ L
Sbjct: 160 DEDRQERIKEEARAKAEQ--ENQMKAAGLYNPHKSLRAILGEDKPRETVPKVPVVIDPIL 217
Query: 138 LE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+ HQ EGVKFLYK + +N++G I+ D+MGLGKT+Q IA L + +
Sbjct: 218 SKVLRPHQVEGVKFLYKCTTGMVVENQYGCIMADEMGLGKTLQCIALLWTLVKQSPRPGK 277
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE-- 242
++ +I CPSS+++NW E S+W + +++ + +LEK+
Sbjct: 278 PTIEK--------CIIACPSSLVKNWANELSKWLGKDTISALAVDGKGGKGELLEKVARW 329
Query: 243 --ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
A G V +I S+++ R + L+ + +++ DE HRLKN +S + A L R
Sbjct: 330 VAASGRNVTQPVMIVSYETLRTLTAHLASCSIGLLLCDEGHRLKNSESLTFQALNSLDVR 389
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ + G+ A + F +
Sbjct: 390 RRVILTGTPIQNDLSEYFSLLNFANPNFLGSKVDFRKNFENAIIRGRDANASDAFQAECE 449
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
++ + L ++ K+++RRT + +L + K ++VVFC +S+ Q YR + PEI+ L
Sbjct: 450 KKLKELGNLVTKFIIRRTNDLLSKYLPV-KYEHVVFCGLSEFQLSLYRLFISSPEIKAL- 507
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G +S P L + L+++ NH +L+ + P
Sbjct: 508 -----------------------LRGTESQP----LKAINMLKKLCNHPQLL-----NLP 535
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKI 535
D R L PD D G N+ GK LE+ ++ + DKI
Sbjct: 536 DDLRGSDHLI-----PD-DFSGSNSSGRGKTQNLRCDWGGKFIVLERFLHQMRTTTNDKI 589
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK K Y + RLDG+ RQ LVD FN+ K+ +FL+S++AG
Sbjct: 590 VLISNYTQTLDLFEKLCRSKKYGYFRLDGTMSITKRQKLVDQFNNPEGKEFIFLLSSKAG 649
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G++EE ++ RQ
Sbjct: 650 GCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQA 709
Query: 655 YKQQLSNIAVSGKLE-KRYF 673
KQ LS+ V K + +R+F
Sbjct: 710 SKQALSSAVVDEKEDAERHF 729
>gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
Length = 1054
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 273/549 (49%), Gaps = 76/549 (13%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTI L + ++ I
Sbjct: 312 LREHQREGVKFLYECVMGLRDYNGEGAILADEMGLGKTLQTITLLWTLLKQNP-----IY 366
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEACGVEV 248
+ + V KK LI+CP ++I NW EF +W V ++ R + + +
Sbjct: 367 EASPVIKKA--LIVCPVTLINNWRKEFRKWLGNERIGVFVFDD-KRKKLTDFTMGKAYNI 423
Query: 249 LITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+I ++ R + +L +IVI DE HRLK ++K A L T RI L+GT +Q
Sbjct: 424 MIVGYEKLRTVQDGLLKGHGVDIVIADEGHRLKTVQNKSGQAIQALNTAKRIILSGTPIQ 483
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + E + D V PG LGT +F + ++ P+ Q+ A R I + R + L +
Sbjct: 484 NDLSEFFAAVDLVNPGILGTYRNFMKEFEGPIVRSQQPEATMRDIEKGEARGEELRELTS 543
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
++LRRT + + + K + V+ C + +Q YR +L GSP
Sbjct: 544 MFILRRT-ADVLSKYLPPKTEYVILCNPTSVQASIYRHVL-----------------GSP 585
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+ Q L N +G F L L L+++ N L+ DEP +A L++
Sbjct: 586 IFQ----SALGNTEGA----FSL----LTVLKKLCNSPSLLTAKAGDEPPNATMEALLST 633
Query: 488 AV------FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSY 540
F P S GK+R L++L+++ + +KI+L S
Sbjct: 634 LTPSLRRQFSPS--------------------SSGKIRVLDQLLHNLQTTTSEKIVLVSN 673
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGL 598
L++L L F RLDGSTPS RQSLVDDFN +P+ + FL+S +AGG GL
Sbjct: 674 YTSTLNLLGILLTSLSLPFLRLDGSTPSAKRQSLVDDFNRAPASKCFAFLLSAKAGGTGL 733
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL A+R+V+FD +WNPA DLQA R R GQKRH ++R++ G+LEE ++ RQV K
Sbjct: 734 NLTGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQVTKIG 793
Query: 659 LSNIAVSGK 667
L++ + K
Sbjct: 794 LADSVMESK 802
>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
Length = 806
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 214/685 (31%), Positives = 339/685 (49%), Gaps = 97/685 (14%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ SV + N P RPP + R G T+ + P +P E + V
Sbjct: 103 FRKAFSVPLINKNSGTYNPNRPPPTLGL----RTGATF-IAKPLHDPSG--EFSIVLYDP 155
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINC 135
DD+ KE E++Q+K + G+ + D H E L + K +GE+P +VP I+
Sbjct: 156 TVDDKPKEPEKKQDK--KDAEGETKIDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDP 211
Query: 136 RLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 212 RLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEA 271
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL 241
TI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 272 GKGTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 322
Query: 242 EACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 323 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNL 382
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R+ L+GT +QN + E ++L + P LGTR FR+ ++ P+ G+ A E +
Sbjct: 383 NVTRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLDFRKRFELPILRGRDADAAEAERK 442
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
DE L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y + PEIQ
Sbjct: 443 KGDECLSELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITSPEIQ 501
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L L G S P L + L+++ NH +L+
Sbjct: 502 AL------------------------LRGKGSQP----LKAINILKKLCNHPDLL----- 528
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-AS 530
D S PD D V A+ DVK GKM+ L++++
Sbjct: 529 -----NIADDLPGSEDCYPD-DYVPKEARGRD----RDVKPWYSGKMQVLDRMLARIRQD 578
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN+ ++ VFL+
Sbjct: 579 TNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLL 638
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE +
Sbjct: 639 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKI 698
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYF 673
+ RQ +KQ LS+ V S + +R+F
Sbjct: 699 FQRQSHKQSLSSCVVDSAEDVERHF 723
>gi|398407551|ref|XP_003855241.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339475125|gb|EGP90217.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 979
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 295/606 (48%), Gaps = 71/606 (11%)
Query: 74 KAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPF---EPLVLSKDGEYPIIQVP 130
K PV SNV Q QE+ + + + + D P + K + + V
Sbjct: 244 KTPVINSNV---------QHQERNAKEAVPRHKVDGENALVMKRPKSVPKGRQMVDVVVD 294
Query: 131 ASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ L EHQR GV FLY+ + G IL D+MGLGKT+QTIA L + +D +
Sbjct: 295 PILTRALREHQRVGVSFLYECVMGMKDFDGEGAILADEMGLGKTLQTIALLWTLLKQDPA 354
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC 244
+ + K LI+CP +VI+NW+ E +W +S++ N + I + +
Sbjct: 355 QNPAQPGIGLIKK---ALIVCPVTVIKNWKKEIYKWLGKTGISVFVADNHNRITDFTKGK 411
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
++I ++ L E +IVI DE HRLK +K A L T RI L+GT
Sbjct: 412 CYNIMIIGYEKLVKVQKQLQEAKIDIVIADEGHRLKTAANKAAQAIKSLNTDKRIILSGT 471
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E + + D V P LG F+ ++ P+ ++ A + + R + L
Sbjct: 472 PIQNDLSEFFMMVDLVNPSVLGKYTTFKREFEGPIVASRQPGATAAALEKGEARSEELAN 531
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
+ ++LRRT E + + K + VVFC + +QK+ YR +++ P +N
Sbjct: 532 ITNMFILRRT-SEILSKYLPPKTEYVVFCKPTKVQKQIYRAVIEAPVFVAAMN------- 583
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
T E VL + L+++ N +L+ +DE + + A+
Sbjct: 584 ----TPTE------------------VLRLITMLKKVCNAPKLLI--KKDEKGNEERVAD 619
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-KILLFSYSVR 543
L + P L +A GK+ L+ L++ +K D K++L S
Sbjct: 620 LIEHI--PQSLLKAPHA-------------SGKLAVLDDLLFQIDTKTDEKVVLVSNYTS 664
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLV 601
LD+L+ F+ GYS+ RLDGSTP RQ LVD FN SP + VFL+S +AGG+G+NL+
Sbjct: 665 TLDVLQDFIGLLGYSWLRLDGSTPVAKRQDLVDTFNRSPKTKSFVFLLSAKAGGVGINLI 724
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R++++D +WNPA DLQA R R GQKR ++RLL+ G+L+E ++ RQ+ K L+
Sbjct: 725 GASRLILYDLDWNPATDLQAMARVHRDGQKRPCHIYRLLTQGALDEKIFQRQISKTGLAE 784
Query: 662 IAVSGK 667
V GK
Sbjct: 785 SIVDGK 790
>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
CIRAD86]
Length = 810
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 193/580 (33%), Positives = 295/580 (50%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
D E P +VP I+ RL + HQ EGVKFLYK + N G I+ D+MGLGKT+Q
Sbjct: 200 DTERP--KVPVVIDPRLAQKLRPHQVEGVKFLYKCTTGLIDSNAEGCIMADEMGLGKTLQ 257
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
I + + + ++ STI K ++ CPSS+++NW E +W +
Sbjct: 258 CITLMWTLLKQSPDAGKSTIQK---------CIVACPSSLVRNWANELVKWLGPDAITPF 308
Query: 231 GPNRDMILEKL------------EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+ E+L A VLI S+++ R++ L +++ DE HR
Sbjct: 309 ACDGKASKEELTQQMRSWASATGRAVVRPVLIVSYETLRLYVDELRNAPIGLMLCDEGHR 368
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN +S+ + A L + R+ L+GT +QN + E + L D+ PG LGTR+ FR+ Y+ P
Sbjct: 369 LKNAESQTFEALTGLNVKKRVILSGTPIQNDLSEYFALLDFANPGYLGTRQEFRKQYEIP 428
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ + + DER + L+ ++ K+++RRT + +L + K ++VVFC ++
Sbjct: 429 ILRGRDADGTDADRQKGDERLKELLILVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 487
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y ++ PEIQ L L G S P L + L
Sbjct: 488 QLDLYNYFIKSPEIQSL------------------------LRGKGSQP----LKAIGLL 519
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ + PD E A F P D G + DVK G
Sbjct: 520 KKLCNHPDLL-----NLPDDLPGCEEHFPADFVPK-DARGRD---------RDVKPWYSG 564
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM+ L++++ DKI+L S + LD+ EK + Y RLDG+ N RQ LV
Sbjct: 565 KMQVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLCRNRSYGCLRLDGTMNVNKRQKLV 624
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 625 DKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 684
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 685 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 724
>gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864]
Length = 941
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 284/543 (52%), Gaps = 65/543 (11%)
Query: 140 HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQREGVKFLY + + G I+ D+MGLGKT+Q ++ + + + + TI K
Sbjct: 264 HQREGVKFLYDAVMGDIVEGYQGCIMADEMGLGKTLQCVSLIWTLLRQGRNGMPTIEK-- 321
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI--YHGPNRDMI---LEKLEAC----- 244
+IICP+S+++NW E +W V G +++ I L C
Sbjct: 322 -------AVIICPASLVKNWHNELQKWLQGKVQSLPVDGGDKEKIESNLNNFINCTGRLL 374
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+LI S++++RIH IL+ +VI DE HRLKN +S+ + A +LKT R+ L+GT
Sbjct: 375 NQPILIISYETFRIHVDILASKPVGLVICDEGHRLKNAQSQTFQALNQLKTDRRVLLSGT 434
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E ++L + PG LGT+ FR ++ P+ G+ +A ++ I E+ Q L
Sbjct: 435 PIQNDLTEYFSLLLFTNPGLLGTQAEFRRRFENPILRGREASATDKEKEIGTEKLQELAK 494
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
++ K+++RRT + + K D VV +S LQ + Y L++ ++ LI S
Sbjct: 495 IVNKFIIRRTN-SLLSKYLPTKVDQVVCIKLSPLQTQLYEALIKSKAVKKLI-----ASS 548
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
S DG + L + L+++ NH +LI Q E
Sbjct: 549 AS--------------DGQTAAS----LGSITLLKKLCNHPDLIYEAC------QENFRE 584
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILLFSYSVR 543
L +F P+ + N + +F + GK + L+ ++ Y ++ D+++L S +
Sbjct: 585 LL-PLFPPEYGV--KNKRGRTF----NPAHSGKFQVLDTMLAYVKSTTNDRVVLISNYTQ 637
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGLNLV 601
+D+ E +GY F RLDG+ RQ LVD+FN +PS V FL+S++AGG G+NL+
Sbjct: 638 TIDLFEDLARLRGYRFVRLDGTLSVKARQKLVDEFN-NPSSNVFLFLLSSKAGGCGINLI 696
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
NR+V+FDP+WNPA D QA R +R GQK+ V ++R L G++EE ++ RQ +K LS+
Sbjct: 697 GGNRLVLFDPDWNPASDGQAMARVWRDGQKKKVYLYRFLGTGTIEEKIFQRQAHKMALSS 756
Query: 662 IAV 664
V
Sbjct: 757 CVV 759
>gi|452002263|gb|EMD94721.1| hypothetical protein COCHEDRAFT_1167819 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 304/632 (48%), Gaps = 86/632 (13%)
Query: 62 SLPQQNPETRRE---KAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVL 118
S+P+ P R+ KAP+ + V Q RH D P L++
Sbjct: 179 SVPEYKPSAHRKQQFKAPLLSTTVMPQRNPSIPQP-----RH-------DPDAP-NALIM 225
Query: 119 SKDGEYPI------IQVPASINCRLLEHQREGVKFLYK----LYKNKHGGILGDDMGLGK 168
+ G P + V ++ L +HQREGV+FLY+ + G I+ D+MGLGK
Sbjct: 226 KRPGSCPKGKQIVDVVVDPVLSKHLRDHQREGVQFLYECVMGMRCEGEGAIMADEMGLGK 285
Query: 169 TIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFN 225
T+QTI L + ++ DS V KK LI+CP+ ++ NW+ EF +W
Sbjct: 286 TLQTITLLWTLMKQNPIHDSP-----PVIKKA--LIVCPAGLVDNWKREFRKWLGNERVG 338
Query: 226 VSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKS 284
V + N+ I ++I ++ RI L + +IVI DE HRLK +
Sbjct: 339 VFVLDAKNKK-IANFTMGKSYNIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANN 397
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
K +A L T RI L+GT +QN + E Y D+V PG LG R F+ ++ P+ ++
Sbjct: 398 KAMLAIQSLNTERRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRTAFKRSFELPIMRSRQ 457
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
A E + + R + LV++ ++++RRT E + + K +++VFC + Q YR
Sbjct: 458 PDASEAELEKGEARWKELVSLTSQFMIRRT-AEVLSKYLPPKTEHIVFCRPTKGQAETYR 516
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
+L P + + S L + K++ C+S P L+K +
Sbjct: 517 AILDSPTFRLALG-----STDIALQLINVLKKV-----CNS-------PSLLKSSK---- 555
Query: 465 LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
D +E+ ++ I L+ N S S K+R L+ L
Sbjct: 556 ------------DNDDTPSEMLQSI----IPLIPSKILNSS-------ASSAKLRLLDSL 592
Query: 525 MYS-WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
++S + + +KI++ S LD++E+ L+ Y+F RLDGSTP++ RQSL++ FN +P
Sbjct: 593 VHSIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKRQSLIEKFNKTPK 652
Query: 584 KQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
FL+S ++GG+GLNL+ A+R+V+FD +WNPA DLQA R R GQK V+R L
Sbjct: 653 TTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLV 712
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYF 673
G L+E +Y RQV K L+N V K F
Sbjct: 713 QGGLDEKIYQRQVMKMGLANAVVDNKASASSF 744
>gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 893
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/552 (32%), Positives = 276/552 (50%), Gaps = 72/552 (13%)
Query: 137 LLEHQREGVKFLYKLYKN----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L EHQR+GV+FLY+ G I+ D+MGLGKT+QTIA L T++K
Sbjct: 250 LREHQRDGVQFLYECVMGMRCEGEGAIMADEMGLGKTLQTIALLW-----------TLMK 298
Query: 193 DNKVDKKGYV----LIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEACG 245
N + V LI+CP+ ++ NW+ EF +W V + N+ I
Sbjct: 299 QNPIHGASPVIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNKK-IANFTMGKS 357
Query: 246 VEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+LI ++ R++ L +IVI DE HRLK +K +A L T RI L+GT
Sbjct: 358 YNILIVGYEMLRVYQEELKRGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGT 417
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E Y D+V PG LG R F+ ++ P+ ++ A E + + R + LV+
Sbjct: 418 PLQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESDLEKGEARWKELVS 477
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
+ ++++RRT E + + K +++VFC + Q AYR +L P + + S
Sbjct: 478 LTSQFMIRRT-AEVLSKYLPPKTEHIVFCRPTKGQAEAYRAVLDSPTFRLAMG-----SS 531
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
L + K++ C+S P L+K + D +E
Sbjct: 532 DIALQLINVLKKI-----CNS-------PSLLKSSK----------------DNDDTPSE 563
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS-WASKGDKILLFSYSVR 543
+ ++ + L+ N N S S K+R L+ L++ + + +KI++ S
Sbjct: 564 MLQSI----LPLIPNNILNSS-------ASSAKLRLLDSLVHRIYTTTEEKIVIVSNYTT 612
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLV 601
LD++E+ L+ Y++ RLDGSTP++ RQ+LV+ FN +P FL+S ++GG+GLNL+
Sbjct: 613 TLDMIERLLVSLSYTYLRLDGSTPASKRQALVEKFNKTPKTTSFAFLLSAKSGGVGLNLI 672
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R+V+FD +WNPA DLQA R R GQK V+R L G L+E +Y RQ+ K L+N
Sbjct: 673 GASRIVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLAN 732
Query: 662 IAVSGKLEKRYF 673
V K F
Sbjct: 733 AVVDNKASASSF 744
>gi|302697641|ref|XP_003038499.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8]
gi|300112196|gb|EFJ03597.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8]
Length = 1076
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 195/635 (30%), Positives = 320/635 (50%), Gaps = 91/635 (14%)
Query: 117 VLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFL 176
V D Y + P+ IN + +Q +G+ ++ L+ N GIL D+MGLGKT+QTI+FL
Sbjct: 158 VDGSDQPYVFEESPSFINGTMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFL 217
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD 235
A + + KG LII P S ++NWE EF +W+ F + G +
Sbjct: 218 AYL-------------KHHHGIKGPHLIIVPKSTLRNWEREFEKWTPDFKAVVLTGSKEE 264
Query: 236 ---MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
++ +L EV ITS++ I S L + ++E +++DEAHR+KN S L
Sbjct: 265 RAEIVASRLITEDFEVCITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSEVVRS 324
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD-EPLKH---GQRLTAP 348
+R R+ +TGT +QN + EL+ L +++ P E FR++ D + H G +
Sbjct: 325 FISRGRLLITGTPLQNNLQELFALLNFICP------EIFRDYKDLDSFLHKDTGDGVDEE 378
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
E+ R+ + L +LR +LLRR K + +L+ KE N+ + +SD+Q++ YR +L+
Sbjct: 379 EKSKRVV----EALHKILRPFLLRRVKSDVEKNLLPKKEINI-YVGLSDMQRKWYRSVLE 433
Query: 409 LPEIQCLINKDLPCSCGSPLT-QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
KD+ G LT + E RL N+ +++L++++ H L
Sbjct: 434 ---------KDIDAVNG--LTGKKEGKTRLMNM--------------VMQLRKVTCHPYL 468
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
D + D LV ++CGKM L+KL+ S
Sbjct: 469 F-------------DGAEPGPPYTTDEHLV---------------ENCGKMLILDKLLKS 500
Query: 528 WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQV 586
KG ++L+FS RMLDILE + + +GY + R+DG T + R + +D++N S K +
Sbjct: 501 MKEKGSRVLIFSQMSRMLDILEDYCLFRGYKYCRIDGGTAHDDRITAIDEYNKPDSDKFI 560
Query: 587 FLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
FL++TRAGGLG+NL +A+ VV++D +WNP DLQA DR+ R GQ + V VFR ++ GS+E
Sbjct: 561 FLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVE 620
Query: 647 ELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEII 706
E + R K +L + + +++ + +E + + +D L ++ I
Sbjct: 621 ERMLERAAQKLRLDQLVIQQGRQQQ--SKAANKEELLDMITHGAEKIMNATDELLINDDI 678
Query: 707 ESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNT 741
+ +G+Q R H N ++GL +S+ S+
Sbjct: 679 DEIIHRGEQ--RTHELNSKYEGLNLEDLSNFKSDA 711
>gi|403417896|emb|CCM04596.1| predicted protein [Fibroporia radiculosa]
Length = 815
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 288/550 (52%), Gaps = 66/550 (12%)
Query: 135 CRLLE-HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C++L HQ EGVKFLYK + +N++G I+ D+MGLGKT+Q IA L + + +
Sbjct: 220 CKVLRPHQIEGVKFLYKCTTGMIVENQYGCIMADEMGLGKTLQCIALLWTLVKQSPHAGK 279
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE-- 242
++ +I CPSS+++NW E +W + ++I + +L ++
Sbjct: 280 PTIEK--------CIIACPSSLVKNWANELVKWLGKDTVSALAIDGKGGKAEMLARVARW 331
Query: 243 -ACGVE-----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
A G V+I S+++ R + L+ + +++ DE HRLKN +S + A L R
Sbjct: 332 VAAGGRNVSQPVMIVSYETLRSLTAHLANCSIGLLLCDEGHRLKNSESLTFQALNGLNVR 391
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E ++L ++ P LG++ FR+ ++ + G+ A ++ +
Sbjct: 392 RRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADASDQTKAECE 451
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
++ + L ++ K+++RRT + +L + K + VVFC +S Q YR + PEIQ L
Sbjct: 452 KKLKELGGLVAKFIIRRTNDLLSKYLPV-KYEQVVFCGLSPFQLSLYRLFISSPEIQAL- 509
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G DS P L + L+++ NH EL+ D P
Sbjct: 510 -----------------------LRGADSQP----LKAINILKKLCNHPELL-----DLP 537
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKI 535
+ R +L D GG+++++ GK LE+ ++ ++ DKI
Sbjct: 538 NDLRGSEKLQPE----DFSGAGGSSRDKGRNQTVRCDYSGKFMVLERFLHRIHTETNDKI 593
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK L K Y + RLDGS N RQ LVD FN K+ VFL+S++AG
Sbjct: 594 VLISNYTQTLDLFEKLLRSKKYGYFRLDGSMTINKRQKLVDQFNDPNGKEFVFLLSSKAG 653
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R + G++EE ++ RQ
Sbjct: 654 GCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFICTGTIEEKIFQRQA 713
Query: 655 YKQQLSNIAV 664
KQ LS+ V
Sbjct: 714 SKQALSSAVV 723
>gi|395333479|gb|EJF65856.1| DNA repair protein, SNF2 family [Dichomitus squalens LYAD-421 SS1]
Length = 813
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 293/557 (52%), Gaps = 66/557 (11%)
Query: 137 LLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY+ + +N++G I+ D+MGLGKT+Q IA + + +
Sbjct: 221 LRPHQVEGVKFLYRCTTGMVVENQYGCIMADEMGLGKTLQCIALMWTLLKQSPHPGRCT- 279
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE----A 243
+DK +I CPSS+++NW E +W + ++I + +LEK+ A
Sbjct: 280 ----IDK---CIIACPSSLVKNWANELVKWLGKDAIAALAIDGKGGKTEMLEKVARWVAA 332
Query: 244 CGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
G V +I S+++ R + L+ +++ DE HRLKN +S+ + A L + R+
Sbjct: 333 SGRNVTQPVMIVSYETLRTLTAHLANCTIGLLLCDEGHRLKNSESQTFQALNSLNVKRRV 392
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN + E ++L ++ P LG++ FR+ ++ + G+ A + +++
Sbjct: 393 ILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADATDAVKAECEKKL 452
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
+ L ++ K+++RRT + +L + K + VVFC S+LQ YR + PEIQ L
Sbjct: 453 KELGGIVAKFIIRRTNDLLSKYLPV-KYEQVVFCRPSELQLSLYRLFISSPEIQAL---- 507
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
L G DS P L + L+++ NH EL+ D P
Sbjct: 508 --------------------LRGKDSQP----LKAINILKKLCNHPELL-----DLPGDL 538
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLF 538
R +L D G +++++ + + GK LE+ ++ ++ DKI+L
Sbjct: 539 RGSEKL----LPEDYSGAGSSSRDKGRNQIIHCEWSGKFLVLERFLHRIHTETNDKIVLI 594
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S + LD+ EK L K Y + RLDG+ N RQ LVD FN K+ +FL+S++AGG G
Sbjct: 595 SNYTQTLDLFEKLLRSKKYGYFRLDGTMTINKRQKLVDQFNDPSGKEFIFLLSSKAGGCG 654
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G++EE ++ RQ KQ
Sbjct: 655 INLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQ 714
Query: 658 QLSNIAVSGKLE-KRYF 673
LS+ V K + +R+F
Sbjct: 715 SLSSAVVDEKEDVERHF 731
>gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502]
gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis]
Length = 877
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 293/584 (50%), Gaps = 63/584 (10%)
Query: 113 FEPLVL---SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDM 164
PL+L S+DGE +I+V + + L EHQR+GV F+++ + +G IL DDM
Sbjct: 110 INPLILWISSEDGEKRVIEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCILADDM 169
Query: 165 GLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF 224
GLGKT+Q+I L + + ++ K +++CP+S+++NW E +W
Sbjct: 170 GLGKTLQSITILWTLLNQGFDGKPSVRK---------AVVVCPASLVKNWASEIEKWLQG 220
Query: 225 NVSIYHGPNRDMILEKLEACGV--------EVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
RD EK+ + +LI S++++R+H L V ++VI DEA
Sbjct: 221 KCKCTPVAERDR--EKVVSAFAGFKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEA 278
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKN+K+K MA L + R+ L+GT +QN ++E Y+L P LG F++ Y
Sbjct: 279 HRLKNDKTKTAMAINNLPAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYA 338
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
P+ G+ A E +A +R Q L + ++LRR + ++ K +FC ++
Sbjct: 339 NPILEGREPDASEYQQELATQRLQELSNITNHFILRRANT-LLAKVLPPKIILNIFCNLT 397
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
+Q YRR L+ + L++ D S G+P L G VL +
Sbjct: 398 PIQNYLYRRFLRSSACKKLLDSD---STGNPT----------GLTG-------QVLSSIQ 437
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAE---------LASAVFGPDID---LVGGNAQNE 504
L ++ NH LI+P K + +E AS G + VG + +N
Sbjct: 438 SLMKLCNHPTLIRPKTSGGYGKGFEGSEKYLEMIHGRSASGESGGEYKKRVTVGSSIRNS 497
Query: 505 SFIGLSDVKS-CGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRL 562
+ G S + GK+ L +L++ S D+++L S + LD+ E RL
Sbjct: 498 NRTGFSSKPNLSGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVFECLCRDLQVPCVRL 557
Query: 563 DGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
DGST R +LV FN S FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA
Sbjct: 558 DGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQA 617
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
R +R GQK++ ++RL S G++EE +Y RQ+ K LS + V+
Sbjct: 618 LARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVT 661
>gi|358371330|dbj|GAA87938.1| SNF2 family N-terminal domain protein [Aspergillus kawachii IFO
4308]
Length = 778
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 301/585 (51%), Gaps = 78/585 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN +G I+ D MGLGKT+Q I+ +
Sbjct: 172 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWT 231
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + E+ +TI K +I CPSS++ NW E +W + ++ +
Sbjct: 232 LLKQSPEAGVTTIQK---------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKAS 282
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ ++ +++ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 283 KTELISQMKQWAIASGRSIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESL 342
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L + R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 343 TWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDA 402
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E ++ DER L +++ K+++RRT + +L + K ++VVFC MS+ Q Y+
Sbjct: 403 AGTEEDLKKGDERLAELSSIVNKFIIRRTNDILSKYLPV-KYEHVVFCNMSEFQLGLYKH 461
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q PEI+ L+ PL + K+L N P L+ L
Sbjct: 462 FIQSPEIKSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLNLSNDLPGC 505
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E P P+ + +D ++ S GKM L++++
Sbjct: 506 EYTFPEDYVPPEARGRDRDIKSWY-------------------------SGKMMVLDRML 540
Query: 526 YSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN+ +
Sbjct: 541 ARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGE 600
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G
Sbjct: 601 EFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 660
Query: 644 SLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
S+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 661 SIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 705
>gi|363749203|ref|XP_003644819.1| hypothetical protein Ecym_2256 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888452|gb|AET38002.1| Hypothetical protein Ecym_2256 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1058
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 290/565 (51%), Gaps = 86/565 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + P +N L +Q +G+ +L L+KN+ GIL D+MGLGKT+QTIAFL +
Sbjct: 124 EFQFRESPGYVNGTLRPYQIQGLNWLVSLHKNQLAGILADEMGLGKTLQTIAFLGYLRYV 183
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MIL 238
+ K G L+I P S + NW E +W+ + I G + M
Sbjct: 184 E-------------GKPGPFLVIAPKSTLNNWLREIKKWTPEVDAFILQGDKDERAKMCQ 230
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
E+L AC E+++ S++ + +++WE V++DEAHR+KNE+S L E +RNR
Sbjct: 231 ERLLACDFEIVVASYEIIIKEKASFKKIDWEYVVIDEAHRIKNEESMLSQVLREFTSRNR 290
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P F E++ T ++ D
Sbjct: 291 LLITGTPLQNNLHELWALLNFLLPDIFSDSAAFDEWF------SSETTGEDK-----DTI 339
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L +L+ +LLRR K + L+ KE N ++ M+ +Q++ Y+++L+ K
Sbjct: 340 VKQLHTILQPFLLRRIKNDVETSLLPKKELN-LYVGMASMQRKWYKQILE---------K 389
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D+ G+ ++ E RL N+ +++L++ NH L
Sbjct: 390 DIDAVNGANRSK-ESKTRLLNI--------------MMQLRKCCNHPYLF---------- 424
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
D + D LV +A K++ L++L+ S G ++L+F
Sbjct: 425 ---DGAEPGPPYTTDEHLVYNSA---------------KLKVLDRLLKKLKSDGSRVLIF 466
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S R+LDILE + +GY + R+DGST R +D++N+ SK+ +FL++TRAGGLG
Sbjct: 467 SQMSRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYNAPESKKFIFLLTTRAGGLG 526
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 527 INLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKL 586
Query: 658 QLSNIAV----SGKLEKRYFEGVQD 678
+L + + +G L+K +G +D
Sbjct: 587 RLDQLVIQQGRAGVLKKESAKGAKD 611
>gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei]
gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei]
Length = 1096
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 287/549 (52%), Gaps = 68/549 (12%)
Query: 137 LLEHQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQR+GVKF++ HG I+ D+MGLGKT+Q I+ L + + + T+
Sbjct: 477 LRPHQRDGVKFMWDCVTGVNIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVS 536
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K +I+CPSS+++NW+ E +W + N R++I+ L +
Sbjct: 537 KS---------IIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKRELIIASLNSFMADSK 587
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C + VLI S++++R++ +IL + IVI DE HRLKN + Y A LK R+ +
Sbjct: 588 MRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSDNLTYQALSGLKCARRVLI 647
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L ++V PG LGT FR+ ++ + G+ A + +E+ +
Sbjct: 648 SGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASAEDQKKGEEKTKE 707
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
+V+++ K ++RRT +L + K ++++ C S LQ+ Y +L++ + ++ KD
Sbjct: 708 MVSLVEKCIIRRTSALLTKYLPV-KYEHIICCKNSTLQETLYNKLIECEKQNRIVEKD-K 765
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ S L+ + K+L N P LV + E KP+ R + K
Sbjct: 766 GATASALSFITHLKKLCN------------HPYLV-------YEEFQKPDNR----FRNK 802
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILLFSY 540
+ F P +SF D GKM+ L+ ++ + + DK +L S
Sbjct: 803 CLPVFPEAFNP-----------KSF----DPSFSGKMKVLDYILAVTRKTTDDKFVLVSN 847
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGL 598
+ +D +GY F RLDGS R +VD FN PS + FL+S++AGG GL
Sbjct: 848 YTQTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFN-DPSSTIFCFLLSSKAGGCGL 906
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ GS+EE ++ RQ +K+
Sbjct: 907 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKA 966
Query: 659 LSNIAVSGK 667
LS+ VS K
Sbjct: 967 LSSCVVSFK 975
>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
Length = 910
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 290/577 (50%), Gaps = 72/577 (12%)
Query: 113 FEPLVL---SKDG--EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG------ILG 161
EPLVL +DG I V + + L HQREGV+F++ HG IL
Sbjct: 151 IEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILA 210
Query: 162 DDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
DDMGLGKT+Q+I L + + + K +I+ P+S++ NWE E +W
Sbjct: 211 DDMGLGKTLQSITLLYTLLCQGFDGTPMVKK---------AIIVTPTSLVSNWEAEIKKW 261
Query: 222 STFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEIVIV 273
+ + RD +L +++ ++VLI S++++R+H S + + +++I
Sbjct: 262 VGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLIC 321
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHRLKN+++ A L + R+ L+GT MQN + E + + ++ PGSLG HFR
Sbjct: 322 DEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRH 381
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+Y+ P+ G+ TA E +A +R L + + +++LRRT HL K VV C
Sbjct: 382 YYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHL-PPKIIEVVCC 440
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
M+ LQ Y + +K+L + Q + VL
Sbjct: 441 KMTTLQSTLYNHFIS--------SKNLKRALADNAKQTK------------------VLA 474
Query: 454 CLVKLQQISNHLELI-----KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+ L+++ NH +LI NP + + A G GG+ +++
Sbjct: 475 YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDG---AWVE 531
Query: 509 LSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTP 567
LS GKM L +L+ + K D+I+L S + LD+ + + Y F RLDGST
Sbjct: 532 LS-----GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTT 586
Query: 568 SNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
+ RQ LV+ N P+K FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R
Sbjct: 587 ISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARV 645
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
+R GQK+ V V+R LS G++EE VY RQ+ K+ L +
Sbjct: 646 WRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKV 682
>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 812
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/580 (32%), Positives = 301/580 (51%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
+GE P +VP I+ RL + HQ EGVKFLY+ + +G I+ D+MGLGKT+Q
Sbjct: 198 EGERP--RVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQ 255
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
IA + + + E+ STI K +I CPSS+++NW E +W +
Sbjct: 256 CIALMWTLLKQSPEAGKSTIQK---------CVIACPSSLVRNWANELIKWLGKDAVTPF 306
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ +++++ + VLI S+++ R++ + +++ DE HR
Sbjct: 307 AIDGKASKEELIQQIRQWSIASGRSVVRPVLIVSYETLRLYADEFGQTPIGLMLCDEGHR 366
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S + A L + R+ L+GT +QN + E + L ++ P LGTR FR+ Y+ P
Sbjct: 367 LKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRMEFRKHYEIP 426
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ + ++ ER L+ ++ K+++RRT + +L + K ++VVFC ++
Sbjct: 427 ILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 485
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
QK Y ++ P++Q L L G S P L + L
Sbjct: 486 QKDLYNHFIKSPDVQSL------------------------LRGKGSQP----LKVIGML 517
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ P D P + PD D V +A+ +VK+ G
Sbjct: 518 KKLCNHPDLLN-LPEDLPGCENT---------LPD-DFVQKDARGRD----REVKTWYSG 562
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM L++++ A DKI+L S + LDI +GY RLDG+ + RQ LV
Sbjct: 563 KMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLV 622
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN S + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 623 DKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 682
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE V+ RQ +KQ LS+ V S + +R+F
Sbjct: 683 FVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|392567178|gb|EIW60353.1| DNA repair protein SNF2 family [Trametes versicolor FP-101664 SS1]
Length = 817
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 300/579 (51%), Gaps = 70/579 (12%)
Query: 119 SKDGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKT 169
KD + +VP I+ RL + HQ EGVKFLY+ + +N++G I+ D+MGLGKT
Sbjct: 203 GKDKKRHAHKVPVVIDPRLTKVLRPHQVEGVKFLYRCTTGMVVENQYGCIMADEMGLGKT 262
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFN 225
+Q IA L + + + ++ +I CPSS+++NW E +W +
Sbjct: 263 LQCIALLWTLLKQSPHAGRPTIEK--------CIIACPSSLVKNWANELVKWLGKDAISA 314
Query: 226 VSIYHGPNRDMILEKLE----ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAH 277
++I + +LEK+ +CG V +I S+++ R L+ + +++ DE H
Sbjct: 315 LAIDGKGGKAEMLEKVARWVASCGRNVSQPVMIVSYETLRTLSVHLANCSIGLLLCDEGH 374
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
RLKN +S + A L + R+ L+GT +QN + E ++L ++ P LG++ FR+ ++
Sbjct: 375 RLKNSESLTFQALNGLNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFEN 434
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
+ G+ A + +++ + L A++ K+++RRT + +L + K + VVFC +SD
Sbjct: 435 AIIRGRDADATDAAKSECEKKLKELGALVAKFIIRRTNDLLSKYLPV-KYEQVVFCKLSD 493
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
Q YR + PEIQ L L G +S P L +
Sbjct: 494 FQLSLYRLFISSPEIQAL------------------------LRGAESQP----LKAINI 525
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
L+++ NH EL+ D P R +L + G +++ + + GK
Sbjct: 526 LKKLCNHPELL-----DLPGDLRGCEKLLPEGYAG----AGATGRDKGRNQGVNCEWGGK 576
Query: 518 MRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
LE+ ++ ++ DKI+L S + LD+ EK K Y RLDG+ N RQ LVD
Sbjct: 577 FLVLERFLHRIHTETNDKIVLISNYTQTLDLFEKLCRSKKYGHFRLDGTMTINKRQKLVD 636
Query: 577 DFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
FN K+ +FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+
Sbjct: 637 SFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECF 696
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
V+R +S G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 697 VYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDAERHF 735
>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
Length = 752
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 279/554 (50%), Gaps = 73/554 (13%)
Query: 137 LLEHQREGVKFLY-----KLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY K++ + G I+ D+MGLGKT+Q IA + + + E+ +
Sbjct: 208 LRPHQVEGVKFLYQCTTGKVHPDAAGCIMADEMGLGKTLQCIALVWTLLQQSEAIGKPTI 267
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN----VSIYHGPNRDMILEKLEACGVE 247
NK ++ CPSS+++NW EF +W N + + G ++ + +
Sbjct: 268 --NKA------IVTCPSSLVKNWANEFVKWLGENRVRPLVVDSGGTKEKVAAVKRWGAAQ 319
Query: 248 ------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++S R + L + +++ DE HRLKN +S L+ L R+ L
Sbjct: 320 GQIVNPILIISYESLRTYSKYLRKSPIGMLLCDEGHRLKNSESLLFQELNSLPVTKRVIL 379
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E Y+L D+ PG LGT FR Y+ P+ G+ A E+ +++DE+
Sbjct: 380 SGTPIQNDLSEYYSLLDFANPGLLGTPSEFRRNYENPILRGRDADASEKERQVSDEKVAE 439
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
++ ++ +RRT + + + K ++VVFC ++ LQ+ Y L PEI+ L
Sbjct: 440 FWKIVSRFTIRRT-NDILSKYLPTKYEHVVFCKLAPLQEALYNVFLTSPEIKTL------ 492
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK-PNPRDEPDKQR 480
L G S P L + L+++ NH L+ PN
Sbjct: 493 ------------------LRGQGSQP----LKAITLLKKLCNHPSLLNLPN--------- 521
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
D E +V P+ N +SF G V + R L K+ DKI+L S
Sbjct: 522 -DLEGCESVLPPNYH--NSNKIEQSFSGKFAVMA----RMLAKIK---KETKDKIVLISN 571
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ E + + Y RLDGS RQ LVD FN + VFL+S++AGG GLN
Sbjct: 572 YTQTLDLFEAYCQEQQYGVLRLDGSMTIPKRQKLVDRFNDPEGGEFVFLLSSKAGGCGLN 631
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++R ++AG++EE ++ RQ +KQ L
Sbjct: 632 LIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCYIYRFIAAGTIEEKIFQRQSHKQSL 691
Query: 660 SNIAVSGKLEKRYF 673
SN V +R+F
Sbjct: 692 SNCVVDEADMERHF 705
>gi|255719682|ref|XP_002556121.1| KLTH0H05566p [Lachancea thermotolerans]
gi|238942087|emb|CAR30259.1| KLTH0H05566p [Lachancea thermotolerans CBS 6340]
Length = 1106
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 299/599 (49%), Gaps = 110/599 (18%)
Query: 71 RREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVP 130
RR+ E + DEE E EQ++ G +QF + PF
Sbjct: 98 RRKTETEEDQELLKDEEGE---EQDQVG------YQFRESPPF----------------- 131
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
+N +L +Q +G+ +L L+++ GIL D+MGLGKT+QTI+F+ + ++
Sbjct: 132 --VNGQLRPYQIQGLNWLVSLHQSNLAGILADEMGLGKTLQTISFIGYMRYVEK------ 183
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACGV 246
K+G ++I P S + NW E +RW+ N I G + ++ KL AC
Sbjct: 184 -------KRGPFVVIAPKSTLNNWLREINRWTPEVNAFILQGDKEERAKLVSNKLMACDF 236
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++++ S++ S +++WE +I+DEAHR+KNE+S L E +RNR+ +TGT +
Sbjct: 237 DIVVASYEIIIKEKSSFKKIDWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPL 296
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+ L +++ P + F +++ + T + L VL
Sbjct: 297 QNNLHELWALLNFLLPDVFSDSQAFDDWFSSESSEEDKGTIV-----------KQLHTVL 345
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
+ +LLRR K E L+ KE N ++ MS +QKR Y+++L+ KDL G+
Sbjct: 346 QPFLLRRLKNEVETSLLPKKELN-LYIGMSAMQKRWYKQILE---------KDLDAVNGA 395
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
++ E RL N+ +++L++ NH L D
Sbjct: 396 NGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF-------------DGAEP 427
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
+ D LV +A K++ L+KL+ + +G ++L+FS R+LD
Sbjct: 428 GPPYTTDEHLVYNSA---------------KLKVLDKLLRKFKEEGSRVLIFSQMSRLLD 472
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
ILE + + Y + R+DGST R +D++N+ SK+ VFL++TRAGGLG+NL +A+
Sbjct: 473 ILEDYCFFRNYEYCRIDGSTAHEDRIEAIDEYNAPDSKKFVFLLTTRAGGLGINLTTADV 532
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K +L + +
Sbjct: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVI 591
>gi|242791140|ref|XP_002481699.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
10500]
gi|242791145|ref|XP_002481700.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
10500]
gi|218718287|gb|EED17707.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
10500]
gi|218718288|gb|EED17708.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1118
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 282/553 (50%), Gaps = 92/553 (16%)
Query: 122 GEYPII--QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
GE I + PA IN + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 169 GETATIFRESPAFINGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL 228
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RD 235
I N G L++ P S + NW++EF++W+ NV + G +
Sbjct: 229 --------RHICGIN-----GPHLVVVPKSTLHNWKMEFAKWTPEVNVMVLQGTKEERHE 275
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I E+LE +V ITS++ S ++ WE +I+DEAHR+KNE+S L +
Sbjct: 276 LITERLEKEDFDVCITSYEMILKEKSHFKKLAWEYIIIDEAHRIKNEESSLSQIIRVFHS 335
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNR+ +TGT +QN + EL+ L +++ P G E F +++
Sbjct: 336 RNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQDSD-------------Q 382
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D Q L VLR +LLRR K + L+ KE N +F MSD+Q + Y+++L+
Sbjct: 383 DTVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEVN-LFVGMSDMQVKWYQKILE------- 434
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNP 472
KD+ G+ + E RL N+ +++L++ NH E +P P
Sbjct: 435 --KDIDAVNGAA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP 477
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D+ D + GKM L+K++ +G
Sbjct: 478 PYTTDEHLID-------------------------------NSGKMVVLDKILNRMKKQG 506
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLIST 591
++L+FS R+LDILE + + + + + R+DGST R + +D++N S K +FL++T
Sbjct: 507 SRVLIFSQMSRVLDILEDYCVFREHKYCRIDGSTAHEDRIAAIDEYNREGSDKFIFLLTT 566
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLG+NL +A+ VV+FD +WNP DLQA DR+ R GQK+ V+VFR ++ ++EE V
Sbjct: 567 RAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVVVFRFVTEHAIEEKVLE 626
Query: 652 RQVYKQQLSNIAV 664
R K +L + +
Sbjct: 627 RAAQKLRLDQLVI 639
>gi|194214970|ref|XP_001915028.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Equus caballus]
Length = 910
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 285/552 (51%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + C L HQ+EG++FLY+ +++G IL D+MGLGKTIQ I+ +
Sbjct: 281 FPLVDVVIDPHLVCHLRPHQKEGIRFLYECVMGFRVNDRYGAILADEMGLGKTIQCISLI 340
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 341 WTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDH 392
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I E ++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 393 KIEEFTKSPFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAVKTTAALISLSC 452
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
R+ LTGT +QN + E + L D+V PG LG +R+ Y+EP+ ++ +A E +
Sbjct: 453 EKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILSRQPSASEEEKELG 512
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + ++LRRT +E I + K +NVVFC + LQ YR+LL ++
Sbjct: 513 ERRAAELTCLTGLFILRRT-QEVINKYLPPKIENVVFCQPAALQIELYRKLLNSRAVRFC 571
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L ++ P L C+ L+++ NH L+ + +++
Sbjct: 572 LQGLL-----------------------ENSPH---LICIGALKKLCNHPCLLFNSIKEK 605
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGD 533
D +++ I++ + F + GK++ L KL+ +
Sbjct: 606 ECSSTWDKNEERSLYEGLINVFPADYNPFMFTE----EESGKLQVLSKLLAVIRELCPAE 661
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 662 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSK 721
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 722 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 781
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 782 QISKQDLSGAVV 793
>gi|448101270|ref|XP_004199521.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380943|emb|CCE81402.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 288/553 (52%), Gaps = 83/553 (15%)
Query: 121 DGEYPIIQVPASINC-RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
D + + + P+ IN +L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL +
Sbjct: 114 DAQTVLTESPSYINGGQLREYQIQGLNWLISLYENRLNGILADEMGLGKTLQTISFLGYL 173
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RD 235
LK G ++I P S + NW EF+ W+ N+ + G ++
Sbjct: 174 ---------RYLKH----IPGPFIVIVPKSTLDNWRREFATWTPDVNILVLQGSKEERQN 220
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I E+L + +V+ITSF+ + L + W+ ++VDEAHR+KNE S L E +
Sbjct: 221 LIQERLLSTDFDVVITSFEMVIRERAHLKKFRWQYIVVDEAHRIKNEDSSLSQILREFYS 280
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
+NR+ +TGT +QN + EL+ L +++ P G E F E+++ Q+ +
Sbjct: 281 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSELFDEWFENQSGDSQQEREKNQ----- 335
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D+ Q L +L +LLRR K + L+ E N V+ M+D+Q + YR+LL+
Sbjct: 336 DKVVQQLHKLLSPFLLRRVKSDVETSLLPKIETN-VYIGMTDMQIQWYRKLLE------- 387
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNP 472
KD+ G + + E RL N+ +++L++ NH L +P P
Sbjct: 388 --KDIDAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGP 430
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D+ V + GKM L+K++ + +G
Sbjct: 431 PYTTDEHL-------------------------------VYNAGKMIILDKMLRKFQKEG 459
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLIST 591
++L+FS R+LDILE + + Y++ R+DGST R S +DDFN+ S K +FL++T
Sbjct: 460 SRVLIFSQMSRLLDILEDYCYLRDYNYCRIDGSTSHEDRISSIDDFNAPDSDKFIFLLTT 519
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLG+NL +A+ V+++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V
Sbjct: 520 RAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTENAIEEKVLD 579
Query: 652 RQVYKQQLSNIAV 664
R K +L + +
Sbjct: 580 RAAQKLRLDKLVI 592
>gi|315439410|gb|ADU19844.1| excision repair cross-complementing rodent repair deficiency
complementation group 6-like protein [Cervus hortulorum]
Length = 1243
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 318/639 (49%), Gaps = 104/639 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EGV FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D+++
Sbjct: 92 LHNQLYEYQKEGVAFLYTLYRDGRRGGILADDMGLGKTVQIIAFLSGMF------DASL- 144
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--- 247
+VL+I P+S+I W EF +W+ V + GP++D + L C ++
Sbjct: 145 -------GNHVLLIMPTSLISIWLREFVKWTPGMRVKTFLGPSKDERTKNL--CRIQQRN 195
Query: 248 -VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+IT++ + LS +N W+ VI+DEAH++K +K + L N I L
Sbjct: 196 GVIITTYHMLINNWQHLSSLNGQEFLWDYVILDEAHKIKTSSTKSAVCARALSAGNPILL 255
Query: 302 TGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TG+ + N + EL++LFD+ GS GT F+ Y+ P+ + A + + +
Sbjct: 256 TGSPIHNILQELWSLFDFAVKGSCYGTLRTFKMEYENPITRAREKDATPGEKALGFKISE 315
Query: 361 HLVAVLRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSD 397
+L+A+++ Y LRRTKEE +G + + K D +++ +
Sbjct: 316 NLMAIIKPYFLRRTKEEVQKKRSSNPEVQLSEKRPDVGAICEMPSLSRKNDLIIWIRLVP 375
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
LQ+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 376 LQEEIYRKFVSLDHI-----KELLMETRSPLAELSVLKKL-----CDHPRLLSARACGLL 425
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
+L K + +DE + + D+D + + + + ++ GK
Sbjct: 426 ------NLGAAKLSVQDEIEGED----------SSDVDHIDQISDD------TLMEESGK 463
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVD 576
M L L+ +G + L+FS S R+L+I+E+ L + + R+DG+ + R+ +
Sbjct: 464 MVFLMDLLKELRDEGHQTLVFSQSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRIS 523
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
F + VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK +V+V
Sbjct: 524 LFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVV 583
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRD 695
+RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 YRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE-------------- 628
Query: 696 LSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 ----LFTVEDFQNSATQLQLQSLHAAQRRSDKNLDEHIA 663
>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
Length = 959
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 290/577 (50%), Gaps = 72/577 (12%)
Query: 113 FEPLVL---SKDG--EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG------ILG 161
EPLVL +DG I V + + L HQREGV+F++ HG IL
Sbjct: 151 IEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILA 210
Query: 162 DDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
DDMGLGKT+Q+I L + + + K +I+ P+S++ NWE E +W
Sbjct: 211 DDMGLGKTLQSITLLYTLLCQGFDGTPMVKK---------AIIVTPTSLVSNWEAEIKKW 261
Query: 222 STFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEIVIV 273
+ + RD +L +++ ++VLI S++++R+H S + + +++I
Sbjct: 262 VGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLIC 321
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHRLKN+++ A L + R+ L+GT MQN + E + + ++ PGSLG HFR
Sbjct: 322 DEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRH 381
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+Y+ P+ G+ TA E +A +R L + + +++LRRT HL K VV C
Sbjct: 382 YYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHL-PPKIIEVVCC 440
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
M+ LQ Y + +K+L + Q + VL
Sbjct: 441 KMTTLQSTLYNHFIS--------SKNLKRALADNAKQTK------------------VLA 474
Query: 454 CLVKLQQISNHLELI-----KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+ L+++ NH +LI NP + + A G GG+ +++
Sbjct: 475 YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDG---AWVE 531
Query: 509 LSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTP 567
LS GKM L +L+ + K D+I+L S + LD+ + + Y F RLDGST
Sbjct: 532 LS-----GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTT 586
Query: 568 SNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
+ RQ LV+ N P+K FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R
Sbjct: 587 ISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARV 645
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
+R GQK+ V V+R LS G++EE VY RQ+ K+ L +
Sbjct: 646 WRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKV 682
>gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
Length = 877
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 292/582 (50%), Gaps = 63/582 (10%)
Query: 115 PLVL---SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGL 166
PL+L S+DGE +I+V + + L EHQR+GV F+++ + +G IL DDMGL
Sbjct: 112 PLILWISSEDGEKRVIEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCILADDMGL 171
Query: 167 GKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV 226
GKT+Q+I L + + ++ K +++CP+S+++NW E +W
Sbjct: 172 GKTLQSITILWTLLNQGFDGKPSVRK---------AVVVCPASLVKNWASEIEKWLQGKC 222
Query: 227 SIYHGPNRDMILEKLEACGV--------EVLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
RD EK+ + +LI S++++R+H L V ++VI DEAHR
Sbjct: 223 KCTPVAERDR--EKVVSAFAGFKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEAHR 280
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN+K+K MA L + R+ L+GT +QN ++E Y+L P LG F++ Y P
Sbjct: 281 LKNDKTKTAMAINNLPAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANP 340
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E +A +R Q L + ++LRR + ++ K +FC ++ +
Sbjct: 341 ILEGREPDASEYQQELATQRLQELSNITNHFILRRANT-LLAKVLPPKIILNIFCNLTPI 399
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q YRR L+ + L++ D S G+P L G VL + L
Sbjct: 400 QNYLYRRFLRSSACKKLLDSD---STGNPT----------GLTG-------QVLSSIQSL 439
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAE-LASAVFGPDID-----------LVGGNAQNESF 506
++ NH LI+P K + +E + G + +G + +N +
Sbjct: 440 MKLCNHPTLIRPKTSGGYGKGFEGSEKYLEMIHGRSVSGESGGEYKKRVTIGSSIRNSNR 499
Query: 507 IGLSDVKS-CGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
G S + GK+ L +L++ S D+++L S + LD+ E RLDG
Sbjct: 500 TGFSSKPNLSGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLDVFECLCRDLQVPCVRLDG 559
Query: 565 STPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
ST R +LV FN S FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA
Sbjct: 560 STSITRRHNLVKTFNDPNSNSFAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQALA 619
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
R +R GQK++ ++RL S G++EE +Y RQ+ K LS + V+
Sbjct: 620 RVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVT 661
>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella
populorum SO2202]
Length = 714
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 296/571 (51%), Gaps = 76/571 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + N G I+ D+MGLGKT+Q I +
Sbjct: 109 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDANAEGCIMADEMGLGKTLQCITLMWT 168
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + ++ STI K +I CP+S+++NW E +W + ++ +
Sbjct: 169 LLKQSPDAGKSTIQK---------CIIACPASLVRNWANELVKWLGEGAIEPFAVDGKAS 219
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
++ + +++ A VLI S+++ R++ L +++ DE HRLKN +S+
Sbjct: 220 KEQMTQQMRAWASASGRAVVRPVLIISYETLRLYVDELRNTPIGLMLCDEGHRLKNSESQ 279
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
YMA L + R+ L+GT +QN + E ++L ++ PG LGT+ FR+ ++ P+ G+
Sbjct: 280 TYMALAGLNVKKRVILSGTPIQNDLSEYFSLLNFANPGYLGTQADFRKQFENPILRGRDA 339
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E + DER + L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y
Sbjct: 340 DGTEADRQKGDERLKELLTLVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNY 398
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
++ PEIQ L+ PL + K+L N P L LP L H
Sbjct: 399 FIKSPEIQSLLRG----KGSQPLKAIGLLKKLCNH------PDLLNLP--DDLPGSEEHF 446
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
P D++ +D E+ + V+ GKM+ L++++
Sbjct: 447 ----PEEYVPKDQRGRDREV-NPVYS------------------------GKMQVLDRML 477
Query: 526 YSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN
Sbjct: 478 ARIRMDSNDKIVLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPNGA 537
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ VFL+S++AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++AG
Sbjct: 538 EFVFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFMAAG 597
Query: 644 SLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 598 TIEEKIFQRQSHKQALSSCVVDSAEDVERHF 628
>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 282/545 (51%), Gaps = 66/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y +G I+ D+MGLGKT+Q I L + + TI K
Sbjct: 140 LRPHQREGVRFMYDCVTGAKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTINK 199
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEAC------ 244
+I+CPSS+++NW EF +W N G +++ ++LE
Sbjct: 200 ---------AIIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGGSKEQTTKELEQYMANQSQ 250
Query: 245 --GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VLI S++++R++ IL+ V+ DE HRLKN ++ Y A + LKT+ R+ L+
Sbjct: 251 RHGTPVLIISYETFRLYAHILNSSEVGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLS 310
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E Y+L +V PG LG+ FR+ ++ P+ GQ + + A ER Q L
Sbjct: 311 GTPIQNDLTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQDANSTDAEREKAAERLQEL 370
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI-QCLINKDLP 421
A++ + ++RRT +L + K + VV M+++Q Y+ LQ I + ++ K+
Sbjct: 371 AALVNRCMIRRTSALLTKYLPV-KFEMVVCVRMTEVQAALYKSFLQSDTIRRSVMEKNAT 429
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ + L+ + L+++ NH +L+ E ++R
Sbjct: 430 KASLTALSNI------------------------TSLKKLCNHPDLVY-----EKIQERA 460
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSY 540
D +A PD N S L + K+ L+ ++ S + DKI+L S
Sbjct: 461 DGFENAATILPD---------NYSPRELRP-ELGAKLMLLDCMLASIKTNTTDKIVLVSN 510
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ EK ++GY + RLDG+ R +VD FN S +F++S++AGG GLN
Sbjct: 511 YTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNQPDSADFIFMLSSKAGGCGLN 570
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ G++EE ++ RQ +K+ L
Sbjct: 571 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKAL 630
Query: 660 SNIAV 664
S V
Sbjct: 631 STTVV 635
>gi|346320573|gb|EGX90173.1| chromatin remodelling complex ATPase chain ISW1 [Cordyceps
militaris CM01]
Length = 1115
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 280/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTIAFL +
Sbjct: 178 PGFIQGQMRDYQVSGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYL---------- 227
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACG 245
+ VD G L+I P S + NW EF+RW+ NV + G D+I ++L
Sbjct: 228 ---RHIVDITGPHLVIVPKSTLDNWRREFARWTPEVNVLVLQGAKEERHDLINDRLVDEK 284
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 285 FDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFNSRNRLLITGTP 344
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ G+ R D Q L V
Sbjct: 345 LQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----GED--------RDQDTVVQQLHRV 391
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ +E N ++ MSD+Q + Y+++L+ KD+ G
Sbjct: 392 LRPFLLRRVKSDVEKSLLPKQEIN-LYLGMSDMQIKWYQKILE---------KDIDAVNG 441
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 442 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 484
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM+ L++L+ ++G ++L+FS
Sbjct: 485 -----------------------------VYNAGKMKVLDRLLKRLQAQGSRVLIFSQMS 515
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DGST R + +DD+N S++ VFL++TRAGGLG+NL
Sbjct: 516 RLLDILEDYCVFREYKYCRIDGSTAHEDRIAAIDDYNRPGSEKFVFLLTTRAGGLGINLT 575
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V+++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 576 SADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 635
Query: 662 IAV 664
+ +
Sbjct: 636 LVI 638
>gi|349576620|dbj|GAA21791.1| K7_Isw1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1129
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 281/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV NA + K G +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLV-YNAAKLQVLDKLLKKLKG--------------EGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
Length = 805
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 300/580 (51%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
+GE P +VP I+ RL + HQ EGV+FLY+ + + G I+ D+MGLGKT+Q
Sbjct: 194 EGERP--KVPVVIDPRLAKVLRPHQVEGVRFLYRCTTGLVDEKAKGCIMADEMGLGKTLQ 251
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
I + + + E+ TI K +I CP+S+++NW E +W +
Sbjct: 252 CITLMWTLLKQSPEAGKPTIHK---------CIIACPASLVKNWANELVKWLGEGAIHPF 302
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I ++ + +L+ + VLI S++S R++ L +V +++ DE HR
Sbjct: 303 AIDGKATKEELTMQLKQWAMASGRSIARPVLIVSYESLRLNIEELRDVKIGLMLCDEGHR 362
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN +S+ YMA L R+ L+GT +QN + E Y+L D+ PG LGT+ FR+ ++ P
Sbjct: 363 LKNAESETYMALTGLNVDRRVILSGTPIQNDLTEYYSLLDFANPGYLGTKADFRKKFELP 422
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ + + E L +++ K+L+RRT + +L + K ++VVFC ++
Sbjct: 423 ILRGRDAAGTDTDKQKGVEANAGLGSLVNKFLIRRTNDILSKYLPV-KYEHVVFCNLAPF 481
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
QK Y +Q P+I+ L L G S P L + L
Sbjct: 482 QKDLYNHFIQSPDIKSL------------------------LRGKGSQP----LKAIGIL 513
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ +D P ++ F PD D V A+ DV+S G
Sbjct: 514 KKLCNHPDLLDLE-KDLPGSEK---------FWPD-DYVPKEARGRD----RDVRSWYSG 558
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
K LE+++ DKI+L S + LD+ EK + Y RLDG+ N RQ LV
Sbjct: 559 KFAVLERMLARIRQDTNDKIVLISNYTQTLDVFEKLCRSRNYGCLRLDGTMNVNKRQKLV 618
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN ++ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 619 DRFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 678
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R + G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 679 FVYRFMGTGTIEEKIFQRQSHKQALSSTVVDSAEDVERHF 718
>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
Length = 827
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 294/575 (51%), Gaps = 68/575 (11%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKN------KHGGILGDDMGLGKTIQTIAFLAA 178
P++ P ++ L HQREGV+F+ + G IL DDMGLGKT+Q I+ +
Sbjct: 197 PLVVDP-HLSTILRPHQREGVRFVIECVAGCKSDLEGTGCILADDMGLGKTLQCISVVW- 254
Query: 179 VFGKDESSDSTILKDNKVDKKGY---VLIICPSSVIQNWEIEFSRW------STFNVSIY 229
T+LK D K LIICP S+++NWE EF +W TF +S
Sbjct: 255 ----------TLLKQG-FDGKPLCQRALIICPGSLVKNWEAEFRKWLGVERIKTFAIS-- 301
Query: 230 HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
+ + + +A V+I S++ Y +L +V +++VI DEAHRLKN +K
Sbjct: 302 ---SANKLEHVQQAKAFPVVIVSYEMYLRCMDLLKQVRFDVVICDEAHRLKNANAKTTRI 358
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
L TR RI LTGT +QN + E + L D+V PG G+ F+ Y+ P+ ++ A
Sbjct: 359 LSGLATRRRIALTGTPVQNDLQEFFTLVDFVNPGLFGSSAKFKRLYETPIVRARQHDATP 418
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+ + R + L + +++LRRTKE +L K D VVFC + LQ + Y+RL+
Sbjct: 419 AEKDLGEARAEELNRTIHEFVLRRTKEVNAAYL-PPKTDYVVFCQPTPLQLQLYQRLIAT 477
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
++ +N G+ V R+ C++ P L+ +Q +N +
Sbjct: 478 QFVRSCMNA---VRGGTRHLLVIAALRM----LCNA-------PSLLAGRQSANVAD--- 520
Query: 470 PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWA 529
+ D+ KD L+ G+ N+ + ++ GK+ + ++ W
Sbjct: 521 ----SDFDRVLKDVR----------RLLPGSDDNDVAARTTLLEGSGKVALVRHMLRQWR 566
Query: 530 SKGD-KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VF 587
K D + LL S S R LDIL+ +G+ F RL GSTP++ R +V+ FN+ VF
Sbjct: 567 EKTDERALLVSNSTRCLDILQLLCEAEGWPFLRLQGSTPTHQRLEMVNRFNARHHDDFVF 626
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L+S++AGG+GLN+V A+R+V+FD +WNP+ DLQA R +R GQ R V ++RL++ G++EE
Sbjct: 627 LMSSKAGGVGLNIVGASRLVLFDTDWNPSHDLQAMARIWREGQTRPVFIYRLVATGTIEE 686
Query: 648 LVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
+Y RQ+ K L + K ++ F +D KE
Sbjct: 687 KIYQRQIVKSALGTTVMEDKETEQAF-STKDLKEL 720
>gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88]
Length = 813
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 297/584 (50%), Gaps = 76/584 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN +G I+ D MGLGKT+Q I+ +
Sbjct: 207 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWT 266
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T ++ +I CPSS++ NW E +W + ++ ++
Sbjct: 267 LLKQSPEAGVTTIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 318
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
++ +++ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 319 TELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 378
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 379 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 438
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
E ++ DER L ++ K+++RRT + +L + K ++VVFC MS Q Y+
Sbjct: 439 GTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNMSAFQLGLYKHF 497
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L+ PL + K+L N P L+ L E
Sbjct: 498 IQSPEIKSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLNLSNDLPGCE 541
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
P P+ + +D ++ S GKM L++++
Sbjct: 542 YTFPEDYVPPEARGRDRDIKSWY-------------------------SGKMMVLDRMLA 576
Query: 527 SW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN+ ++
Sbjct: 577 RIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEE 636
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS
Sbjct: 637 FVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGS 696
Query: 645 LEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 697 IEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 740
>gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae]
Length = 782
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 291/559 (52%), Gaps = 67/559 (11%)
Query: 137 LLEHQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQR+GVKF++ HG I+ D+MGLGKT+Q I+ L + + + T+
Sbjct: 167 LRPHQRDGVKFMWDCVTGVNIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVS 226
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K +I+CPSS+++NW+ E +W + N R++I++ L +
Sbjct: 227 KS---------IIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKRELIIQCLNSFMSDSK 277
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C + VLI S++++R++ +IL IVI DE HRLKN ++ Y A LK R+ +
Sbjct: 278 MRCAIPVLIISYETFRLYANILHSGEVGIVICDEGHRLKNSENLTYQALSGLKCARRVLI 337
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L ++V PG LGT FR+ ++ + G+ A + +E+ +
Sbjct: 338 SGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASAEDQKKGEEKTKE 397
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
+V+++ K ++RRT +L + K ++++ C S LQ+ Y +L++ + + KD
Sbjct: 398 MVSLVEKCIIRRTSALLTKYLPV-KYEHIICCKNSTLQETLYNKLIECEKQNRITEKDKG 456
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ S L+ + K+L N P LV + EL KP+ R + K
Sbjct: 457 AT-ASALSFITHLKKLCNH------------PYLV-------YEELQKPDNR----FRTK 492
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILLFSY 540
+ F P +SF D GKM+ L+ ++ + + DK +L S
Sbjct: 493 CLSVFPEAFNP-----------KSF----DPSFSGKMKVLDYILAVTRKTTDDKFVLVSN 537
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ +D +GY F RLDGS R +VD FN S FL+S++AGG GLN
Sbjct: 538 YTQTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLN 597
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ GS+EE ++ RQ +K+ L
Sbjct: 598 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKAL 657
Query: 660 SNIAV-SGKLEKRYFEGVQ 677
S+ V +G+ R+F Q
Sbjct: 658 SSCVVDAGEDVARHFSNEQ 676
>gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger]
Length = 846
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 297/584 (50%), Gaps = 76/584 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN +G I+ D MGLGKT+Q I+ +
Sbjct: 240 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWT 299
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T ++ +I CPSS++ NW E +W + ++ ++
Sbjct: 300 LLKQSPEAGVTTIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 351
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
++ +++ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 352 TELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESLT 411
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 412 WTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDAA 471
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
E ++ DER L ++ K+++RRT + +L + K ++VVFC MS Q Y+
Sbjct: 472 GTEEDLKKGDERLAELSGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNMSAFQLGLYKHF 530
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L+ PL + K+L N P L+ L E
Sbjct: 531 IQSPEIKSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLNLSNDLPGCE 574
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
P P+ + +D ++ S GKM L++++
Sbjct: 575 YTFPEDYVPPEARGRDRDIKSWY-------------------------SGKMMVLDRMLA 609
Query: 527 SW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN+ ++
Sbjct: 610 RIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEE 669
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS
Sbjct: 670 FVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGS 729
Query: 645 LEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 730 IEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 773
>gi|392301095|gb|EIW12184.1| Isw1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1069
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 122 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 178
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 179 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 227
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 228 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 287
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 288 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 336
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 337 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 386
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 387 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 422
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 423 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 463
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 464 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 523
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 524 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 583
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 584 LRLDQLVI 591
>gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118]
Length = 1069
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 122 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 178
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 179 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 227
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 228 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 287
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 288 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 336
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 337 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 386
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 387 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 422
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 423 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 463
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 464 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 523
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 524 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 583
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 584 LRLDQLVI 591
>gi|256272897|gb|EEU07865.1| Isw1p [Saccharomyces cerevisiae JAY291]
Length = 1129
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 281/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSVQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV NA + K G +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLV-YNAAKLQVLDKLLKKLKG--------------EGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO]
Length = 1069
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 122 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 178
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 179 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 227
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 228 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 287
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 288 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 336
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 337 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 386
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 387 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 422
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 423 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 463
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 464 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 523
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 524 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 583
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 584 LRLDQLVI 591
>gi|395548628|ref|XP_003775239.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1438
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 331/666 (49%), Gaps = 112/666 (16%)
Query: 118 LSKDGEYPIIQVPAS-------INCRLLEHQREGVKFLYKLYK-NKHGGILGDDMGLGKT 169
++K+G+ I V S ++ +L E+Q+EGV FLY LYK N+ GGIL DDMGLGKT
Sbjct: 107 IAKEGDDEFIDVCNSGLMLYRELHDQLFEYQKEGVAFLYSLYKENRKGGILADDMGLGKT 166
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSI 228
IQ IAFL+A+F D+ ++K YVL+I P+S+I W EF +W+ V+
Sbjct: 167 IQIIAFLSAMF------DAELVK--------YVLLIMPTSLISTWIKEFGKWTPGMRVAT 212
Query: 229 YHGPNRDMILEKLEACGVE--VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKN 281
+HG ++ L + V +T++ + LS+++ W+ +I+DEAH++K+
Sbjct: 213 FHGSSKSERTRNLNRIQRKNGVAVTTYQMVINNWQQLSQLDGNEFVWDYLILDEAHKIKS 272
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLK 340
+K +A + +NR+ LTGT +QN + EL++LFD+ GS LGT + F+ Y+ P+
Sbjct: 273 SSTKSSIAARAIPVKNRLLLTGTPVQNNLYELWSLFDFACQGSLLGTSKTFKMEYENPIT 332
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE-----------TIGHLMMG---- 385
+ A + + ++L+ +++ Y LRRTK++ ++ +G
Sbjct: 333 RAREKDATSGEKALGLKISENLMTLIKPYFLRRTKDDVQKKNNTKAQSSLPEKKLGDDVV 392
Query: 386 --------KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
K + +++ + LQ+ YR+ + L I+ L+ SPL ++ K+L
Sbjct: 393 CEIPSLSRKNELIIWVYLVPLQEEIYRKFVSLNHIKQLL-----METRSPLAELTILKKL 447
Query: 438 DNLDGCDSCPFCLVLPC-LVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
CD C L+ L++ +F
Sbjct: 448 -----CDHPRLLSARACSLLGLKE---------------------------GIFFNK--- 472
Query: 497 VGGNAQNESFIGLSDV------KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
G N + +S I + V K GK+ L L+ +G + L+FS S R+LDI+E
Sbjct: 473 -GKNQEGQSEIQIDQVPPESLMKESGKVIFLMALLKRLQDEGHQTLVFSQSRRLLDIIEH 531
Query: 551 FLIRKGYSFSRLDGS-TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIF 609
L ++ + R+DG+ T RQ +D F S VFL++++ GG+GL L +A+RVVIF
Sbjct: 532 LLKKENFKTLRIDGTVTQLPERQRRIDLFQQSQDASVFLLTSQVGGVGLTLTAASRVVIF 591
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL-SNIAVSGKL 668
DP+WNPA D QA DR +R GQK +V+V+RL++ G++EE +Y RQV+K L K
Sbjct: 592 DPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDQKN 651
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERH--HCTNQGF 726
RYF K+ ELF I + FR + + H + + E H + G
Sbjct: 652 PVRYF-----SKQELRELFTIGD-FRSSPTQVQLHSLHAGHRKTDKTLEDHIAYLHTLGI 705
Query: 727 KGLETH 732
G+ H
Sbjct: 706 AGISDH 711
>gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1101
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 279/548 (50%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 154 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 210
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 211 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 259
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 260 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 319
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 320 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 368
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 369 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 418
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 419 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 454
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L G ++L+
Sbjct: 455 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEXGSRVLI 495
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 496 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 555
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 556 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 615
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 616 LRLDQLVI 623
>gi|6319722|ref|NP_009804.1| chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae S288c]
gi|2506238|sp|P38144.2|ISW1_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW1
gi|1872131|emb|CAA85208.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810576|tpg|DAA07361.1| TPA: chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae
S288c]
Length = 1129
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>gi|338728445|ref|XP_003365673.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Equus caballus]
Length = 727
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 285/552 (51%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + C L HQ+EG++FLY+ +++G IL D+MGLGKTIQ I+ +
Sbjct: 98 FPLVDVVIDPHLVCHLRPHQKEGIRFLYECVMGFRVNDRYGAILADEMGLGKTIQCISLI 157
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 158 WTLQCQGPYGGKPVIKKT--------LIVTPGSLVNNWRKEFQKWLGSERIKIFAVGQDH 209
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
I E ++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 210 KIEEFTKSPFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAVKTTAALISLSC 269
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
R+ LTGT +QN + E + L D+V PG LG +R+ Y+EP+ ++ +A E +
Sbjct: 270 EKRVILTGTPVQNDLQEFFALIDFVNPGILGPLSSYRKIYEEPIILSRQPSASEEEKELG 329
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + ++LRRT +E I + K +NVVFC + LQ YR+LL ++
Sbjct: 330 ERRAAELTCLTGLFILRRT-QEVINKYLPPKIENVVFCQPAALQIELYRKLLNSRAVRFC 388
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L ++ P L C+ L+++ NH L+ + +++
Sbjct: 389 LQGLL-----------------------ENSPH---LICIGALKKLCNHPCLLFNSIKEK 422
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGD 533
D +++ I++ + F + GK++ L KL+ +
Sbjct: 423 ECSSTWDKNEERSLYEGLINVFPADYNPFMFTE----EESGKLQVLSKLLAVIRELCPAE 478
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 479 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSK 538
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 539 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 598
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 599 QISKQDLSGAVV 610
>gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 922
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 202/627 (32%), Positives = 309/627 (49%), Gaps = 88/627 (14%)
Query: 57 ETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPL 116
+T N S P K P+++S V + Q RH D T P +
Sbjct: 180 KTLNVSAPHSAAMNNSFKNPLKESTVL----MPRSNGQLPTPRH-------DPTLPGS-V 227
Query: 117 VLSKDGEYPI------IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMG 165
V+ + P+ + V I L EHQREGVKFLY+ N G IL D+MG
Sbjct: 228 VMQRPNSVPLGKQIVDVVVDPIIGRHLREHQREGVKFLYECVMGLRPFNGEGAILADEMG 287
Query: 166 LGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---S 222
LGKT+QTIA + + ++ I V KK LI+CP ++I NW+ EF +W
Sbjct: 288 LGKTLQTIALIWTLLKQNP-----IYGSQPVIKKA--LIVCPVTLINNWKKEFKKWLGSD 340
Query: 223 TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKN 281
V + G +R+ + + V+I ++ R + + +IVI DE HRLK
Sbjct: 341 RIGVFVADG-SRNRLSDFTMGRSYSVMIIGYERLRSVQEQLTKGPGIDIVIADEGHRLKT 399
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
++K A L T RI L+GT +QN++ E + + D+V P LGT + F +D P+
Sbjct: 400 VQNKSAQAIQSLNTSRRIILSGTPIQNELSEFFAMVDFVNPALLGTFKSFMREFDGPIVA 459
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
++ AP++ + R + L + ++LRRT + HL K + ++FC + Q+
Sbjct: 460 ARQPNAPKKVVEKGKARSEELAELTSPFILRRTADILSKHLP-PKTEYILFCNPTSAQRN 518
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
Y+ +L P Q ++ + S L + K++ C+S P L+K
Sbjct: 519 VYQHVLASPLFQSVLK-----NSESALQLITILKKV-----CNS-------PSLLK---- 557
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAV--FGPDID--LVGGNAQNESFIGLSDVKSCGK 517
P+ E + + +D +++ + P+I LV G S GK
Sbjct: 558 ----------PKLEDNGKAEDTSMSAFISSLQPNIHRCLVAG--------------SSGK 593
Query: 518 MRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
+R L++L+Y+ SK +K++L S L++L L F RLDGSTP++ RQ+LVD
Sbjct: 594 IRVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPASKRQALVD 653
Query: 577 DFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
DFN SP FL+S +AGG GLNL+ A+R+V+FD +WNPA D+QA R R GQKRH
Sbjct: 654 DFNRSPPSSCFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHC 713
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSN 661
++RLL G +EE ++ RQV K L++
Sbjct: 714 HIYRLLLKGGIEEKIWQRQVTKLGLAD 740
>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
Length = 819
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 316/616 (51%), Gaps = 84/616 (13%)
Query: 86 EEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD-GEYPIIQVPASINCRLLE----H 140
+E ++++ E+ G++ L Q H E L + K E P +VP I+ RL + H
Sbjct: 173 KEVPRDKDDEEIGKNTLDQ-PLVHKSLAEILGIKKKVDERP--KVPVVIDPRLAKILRPH 229
Query: 141 QREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDN 194
Q EGVKFLY+ + KN G I+ D MGLGKT+Q I + + + E+ ST+ K
Sbjct: 230 QIEGVKFLYRCTTGLVDKNASGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKSTVQK-- 287
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PNRDMILEKLEACGVE--- 247
+I CP++++ NW E +W N + G ++ ++ +L +
Sbjct: 288 -------AVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGR 340
Query: 248 -----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
VLI S+++ R++ L + +++ DE HRLKN S+ Y+A +L + R+ L+
Sbjct: 341 SVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILS 400
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L D+ PG LG+R F + Y+ P+ G+ E + +ER L
Sbjct: 401 GTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTEEQQKKGNERLAEL 460
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y +Q PEI+ L
Sbjct: 461 LNLVNKFIIRRSNDLLSKYLPV-KYEHVVFCNLAPFQLDLYNHFIQSPEIKSL------- 512
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
L G S P L + L+++ NH +L+K + D P ++
Sbjct: 513 -----------------LRGKGSQP----LKAIGILKKLCNHPDLLKLS-EDLPGCEKYF 550
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKGDKILLFS 539
E D+ N + G +VKS GKM L++++ DKI+L S
Sbjct: 551 PE----------DMASSNGRR----GDREVKSWYSGKMMVLDRMLARIRQDTNDKIVLIS 596
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ E+ +GY RLDG+ R LVD FN ++ VFL+S++AGG G+
Sbjct: 597 NYTQTLDLFERLCRSRGYGCIRLDGTMGVKKRSKLVDRFNDPNGEEFVFLLSSKAGGCGI 656
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NLV ANR+V+FDP+WNPA D QA R +R GQ + V+R ++ G++EE ++ RQ +KQ
Sbjct: 657 NLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQS 716
Query: 659 LSNIAV-SGKLEKRYF 673
LS+ V S + +R+F
Sbjct: 717 LSSCVVDSAEDVERHF 732
>gi|365766942|gb|EHN08431.1| Isw1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1129
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>gi|151946631|gb|EDN64853.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
gi|190408605|gb|EDV11870.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1129
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
Length = 918
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 285/537 (53%), Gaps = 48/537 (8%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +L
Sbjct: 303 LRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVL 362
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S+++NW+ EF +W + + ++ + E + + V+I
Sbjct: 363 KR--------ALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMI 414
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + + + ++I DE HRLKN K A L RI LTGT +QN +
Sbjct: 415 ISYEMLLRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQNDL 474
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E Y L ++V PG LG+ +R+ Y+EP+ + +A + + ++R L + ++
Sbjct: 475 QEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFI 534
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K++N++FC + LQ YR+LL I +
Sbjct: 535 LRRT-QEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCLQG------------ 581
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
RL+N L C+ L+++ NH L+ +++ + D + S+++
Sbjct: 582 -----RLENSPH---------LICIGALKKLCNHPCLLFKALKEKCCDPKSDEHVESSLY 627
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGDKILLFSYSVRMLDIL 548
D+ + +++F S++ S GK++ L KL+ + S ++++L S + L++L
Sbjct: 628 EGLTDVFPQDYTSDTF---SEIDS-GKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVL 683
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
+ GYS++RLDG+TP + RQ +VD FNS S +FL+S++AGG+GLNLV A+ ++
Sbjct: 684 LETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLI 743
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 744 LYDIDWNPATDIQAMARVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVV 800
>gi|320591351|gb|EFX03790.1| snf2 family helicase [Grosmannia clavigera kw1407]
Length = 1138
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 174 PAFIQGLMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 223
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G L+I P S + NW+ EF++W+ NV + G + +I E+L
Sbjct: 224 ---RHIMGTTGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERHTLIAERLVDEN 280
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 281 FDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 340
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 341 LQNNLHELWALLNFLLPDVFGDAEAFDQWFS-----GQD--------RDQDTVVQQLHRV 387
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MSD+Q + Y+++L+ KD+ G
Sbjct: 388 LRPFLLRRVKSDVEKSLLPKKEMN-VYVGMSDMQVKWYQKILE---------KDIDAVNG 437
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ G +L +++L++ NH E +P P D+
Sbjct: 438 A---------------GGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 480
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L++L+ + +G ++L+FS
Sbjct: 481 -----------------------------VYNAGKMAVLDRLLKRMSEQGSRVLIFSQMS 511
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + +GY + R+DGST R + +D++N S++ VFL++TRAGGLG+NL
Sbjct: 512 RLLDILEDYCVFRGYQYCRIDGSTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLT 571
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 572 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 631
Query: 662 IAV 664
+ +
Sbjct: 632 LVI 634
>gi|126342880|ref|XP_001372665.1| PREDICTED: DNA excision repair protein ERCC-6-like [Monodelphis
domestica]
Length = 1189
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 317/635 (49%), Gaps = 93/635 (14%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
RL E+Q+EGV FLY LYK+K GGIL DDMGLGKT+Q IAFL+A+F D+ +++
Sbjct: 96 RLFEYQKEGVAFLYSLYKDKRKGGILADDMGLGKTVQIIAFLSAMF------DAELVR-- 147
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I PSS+I W EF++W+ V+ +HG ++ + L + V IT
Sbjct: 148 ------HVLLIMPSSLISTWVKEFAKWTPGMRVATFHGSSKSERTKNLTRIQRKSGVAIT 201
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + LS+++ W+ +I+DEAH++K+ +K + +NRI LTGT +
Sbjct: 202 TYQMLINNWQQLSQMDGKEFVWDYLILDEAHKIKSSSTKSSKIARCIPVKNRILLTGTPI 261
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 262 QNNLYELWSLFDFACQGSLLGTSKTFKMEYENPIIRAREKDATIGEKALGFKISENLMTL 321
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVV--------FCTMSD---------------LQKRA 402
++ Y LRRTKE+ K+ ++ FC M LQ+
Sbjct: 322 IKPYFLRRTKEDVQKKSANNKQSSLPEKDPGGADFCEMPSLSRKNELIIWVRLVPLQEEI 381
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPC-LVKLQQI 461
YR+ + L I K L SPL ++ K+L CD C L+ L+
Sbjct: 382 YRKFVSLNHI-----KQLMIETRSPLAELNVLKKL-----CDHPRLLSARVCSLLGLKG- 430
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
+S G + LV + Q + S ++ GK+ L
Sbjct: 431 ------------------------SSLSGGDESQLVHSDIQMDQIPHDSLMQESGKVIFL 466
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDFNS 580
L+ +G + L+FS S ++LDI+E L + + R+DG+ T + RQ +D F
Sbjct: 467 MALLKRLQDEGHQTLVFSQSRKLLDIIEHLLKAEHFKTLRIDGTVTHLSERQRRIDLFQQ 526
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
S VFL++++ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 527 SRGVSVFLLTSQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 586
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLSDN 699
+ G++EE +Y RQV+K L K RYF K+ ELF + + FR +
Sbjct: 587 TCGTVEEKIYRRQVFKDSLVRQTTGDKKNPFRYF-----TKQELRELFTLGD-FRSSATQ 640
Query: 700 LFTSEIIESHEEQGQQQERH--HCTNQGFKGLETH 732
L + H + ++ E H + G G+ H
Sbjct: 641 LQLHSLHAGHRKTDKKLEEHIAYLHTLGIAGISDH 675
>gi|452004580|gb|EMD97036.1| hypothetical protein COCHEDRAFT_118646 [Cochliobolus heterostrophus
C5]
Length = 785
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 317/622 (50%), Gaps = 89/622 (14%)
Query: 85 DEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINCRLL 138
D++ E +QE E Q + + D H E L L K D E P +VP I+ RL
Sbjct: 130 DDKTEPKQEPEP-KESQTEKKELDAPLVHKSLAEILGLKKKVDNERP--RVPVVIDPRLA 186
Query: 139 E----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDS 188
+ HQ EGVKFLY+ + +G I+ D+MGLGKT+Q I + + + E+ S
Sbjct: 187 KVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKS 246
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLEAC 244
TI K +I CPSS+++NW E +W + +I +++ +++++
Sbjct: 247 TIQK---------CVIACPSSLVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQW 297
Query: 245 GVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ VLI S+++ R++ + +++ DE HRLKN S + A L +
Sbjct: 298 SIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHRLKNGDSLTFTALNSLNVQ 357
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E + L ++ PG LGTR FR+ ++ P+ G+ + I+ +
Sbjct: 358 RRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIPILKGRDANGTDADIQKGN 417
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
ER L+ ++ K+++RRT + +L + K ++VVFC ++ QK Y ++ P++Q L
Sbjct: 418 ERLTELLGLVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQKDLYNHFIKSPDVQSL- 475
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G S P L + L+++ NH +L+ P D P
Sbjct: 476 -----------------------LRGKGSQP----LKVIGMLKKLCNHPDLLN-LPEDLP 507
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKGD 533
+ K E D V +A+ +VK GKM L++++ A D
Sbjct: 508 GCEDKLPE----------DFVQKDARGRD----REVKVWYSGKMAVLDRMLARIRAETND 553
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
KI+L S + LDI +GY RLDG+ + RQ LVD FN S + VFL+S++
Sbjct: 554 KIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVFLLSSK 613
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE V+ R
Sbjct: 614 AGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEEKVFQR 673
Query: 653 QVYKQQLSNIAV-SGKLEKRYF 673
Q +KQ LS+ V S + +R+F
Sbjct: 674 QSHKQSLSSCVVDSAEDVERHF 695
>gi|17508659|ref|NP_492438.1| Protein RAD-54 [Caenorhabditis elegans]
gi|6580248|emb|CAA22254.2| Protein RAD-54 [Caenorhabditis elegans]
Length = 818
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 292/560 (52%), Gaps = 69/560 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQR+GVKF++ HG I+ D+MGLGKT+Q I+ L + + + T+
Sbjct: 202 LRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVS 261
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K +I+CPSS+++NW+ E +W + N R+ I+ L +
Sbjct: 262 KS---------IIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQIIACLNSFMADSK 312
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C + VLI S++++R++ +IL + IVI DE HRLKN ++ Y A LK R+ +
Sbjct: 313 MRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQALSGLKCARRVLI 372
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L ++V PG LGT FR+ ++ + G+ A + +E+ +
Sbjct: 373 SGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASSEDQKKGEEKTKE 432
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
+++++ K ++RRT +L + K ++++ C S LQ+ Y +L++ + ++ KD
Sbjct: 433 MISLVEKCIIRRTSALLTKYLPV-KYEHIICCKNSTLQETLYNKLIECEKQNRIVEKDKG 491
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ + L + L+++ NH L+ + +PD + +
Sbjct: 492 ATASA-------------------------LSFITHLKKLCNHPYLVY-DEFQKPDNRFR 525
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLS-DVKSCGKMRALEKLM-YSWASKGDKILLFS 539
+ L+ +F ESF S D GKM+ L+ ++ + + DK +L S
Sbjct: 526 NKCLS--IFP------------ESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVS 571
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ +D + +GY F RLDGS R +VD FN S FL+S++AGG GL
Sbjct: 572 NYTQTIDQFMELCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGL 631
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ GS+EE ++ RQ +K+
Sbjct: 632 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKA 691
Query: 659 LSNIAV-SGKLEKRYFEGVQ 677
LS+ V +G+ R+F Q
Sbjct: 692 LSSCVVDAGEDVARHFSSEQ 711
>gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
Length = 870
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 316/637 (49%), Gaps = 91/637 (14%)
Query: 73 EKAPVEKSNVFDDEEKEK-------EQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYP 125
E A V DD E E+ EQ E+ Q H + L L+K
Sbjct: 211 EHAIVLFDPTIDDREAERRKAEIQQEQAAEETRIEAGAAVQTPHKSLADILGLNKAKSKE 270
Query: 126 IIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFL 176
I +VP I+ L + HQ EGVKFLY+ + + +G I+ D+MGLGKT+Q IA +
Sbjct: 271 IEKVPVVIDPVLSKVLRPHQVEGVKFLYRCTTGLVVEKAYGCIMADEMGLGKTLQCIALM 330
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYV---LIICPSSVIQNWEIEFSRW----STFNVSIY 229
T+LK + + K + +I+CPSS+++NW E +W + N+++
Sbjct: 331 W-----------TLLKQSPIAHKSTIEKCIIVCPSSLVRNWANELIKWLGPAAPGNLALD 379
Query: 230 HGPNRDMILEKLE--------ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
++D ++E A V+I S+++ R L +++ DE HRLKN
Sbjct: 380 GKLSKDEMIEATRRWCSASGRAISQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKN 439
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
S + A ++K R R+ L+GT +QN + E + L ++ P LG+R FR+ ++ +
Sbjct: 440 ADSLTFQALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGSRTEFRKNFEIAILK 499
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
G+ A E+ + A+E+ L A++ ++++RRT + +L + K ++VVFC MS Q
Sbjct: 500 GRDAEATEKQQQEANEKLSQLSALVSRFIIRRTNDLLSKYLPV-KYEHVVFCKMSAFQLD 558
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQI 461
YR ++ PEI+ L L G S P L + L+++
Sbjct: 559 LYRLFIRSPEIKKL------------------------LRGTGSQP----LKAIGILKKL 590
Query: 462 SNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
NH +L+ D P+ E + P ++ ++ + + GKM L
Sbjct: 591 CNHPDLL-----DLPNDLEGSEEYFPEAYTP---------RDRRYV---NPELSGKMMVL 633
Query: 522 EKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS 580
++ + + A+ DKI+L S + LD+ E+ + RLDG+ N RQ LVD FN
Sbjct: 634 QRFLETIRATSNDKIVLISNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFND 693
Query: 581 SPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
K+ +FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R
Sbjct: 694 PEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRF 753
Query: 640 LSAGSLEELVYTRQVYKQQLSNIAVS-GKLEKRYFEG 675
++ GS+EE + RQ +KQ LS+ V + R+F G
Sbjct: 754 IATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSG 790
>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
Length = 827
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 298/586 (50%), Gaps = 80/586 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I+ +
Sbjct: 221 RVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMWT 280
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T+++ +I CPSS++ NW E +W + ++ ++
Sbjct: 281 LLKQSPEAGKTLIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 332
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ +++ + VLI S+++ R++ L + +++ DE HRLKN+ S
Sbjct: 333 TELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLT 392
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L ++ P LG++ FR+ ++ P+ G+
Sbjct: 393 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAA 452
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ + DE L ++ K+++RRT + +L + K ++VVFC +S Q Y
Sbjct: 453 GSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPV-KYEHVVFCNLSQFQLDLYNHF 511
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 512 IQSPEIRSL------------------------LRGKGSQP----LKAIGLLKKLCNH-- 541
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
PD +L F D V A+ D+KS GKM L+++
Sbjct: 542 ---------PDLLNLSTDLPGCEFAFPEDYVPPEARGRD----RDIKSWYSGKMMVLDRM 588
Query: 525 MYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ DKI+L S + LD+ EK +GY RLDG+ N RQ LVD FN+
Sbjct: 589 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 648
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 649 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 708
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
GS+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 709 GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 754
>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog
1
gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
Length = 852
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 282/552 (51%), Gaps = 79/552 (14%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTI 190
L HQ EGVKFLYK + +G I+ D+MGLGKT+Q IA L + + ++ TI
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPN--RDMILEKLEACG 245
K +I CPSS+++NW E +W I G + +++I+ +
Sbjct: 324 EK---------AIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWAS 374
Query: 246 VE-------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
V VLI S+++ R + L+ +++ DE HRLKN S + A +L + R
Sbjct: 375 VHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRR 434
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + E ++L ++ PG LG+R+ FR+ Y+ P+ G+ E+ D +
Sbjct: 435 VILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAK 494
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ ++++RRT + + + K ++VVFC +S+ Q Y+ + PEI NK
Sbjct: 495 LAELAKIVNRFIIRRT-NDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEI----NK 549
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
L + PL + L++I NH +L+
Sbjct: 550 ILRGTGSQPLKAIGL------------------------LKKICNHPDLLNLT------- 578
Query: 479 QRKDAELASAVFGPDI---DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-K 534
+D E A+F P +L G + +S + GKM LE+++Y + D K
Sbjct: 579 --EDLEGCEALFPPGFIPRELRGRDRNIDSSLS-------GKMLVLERMLYQIKQETDDK 629
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTR 592
I+L S LD+ E+ +GY RLDG+ N RQ LVD FN P K VFL+S++
Sbjct: 630 IVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFND-PEKDAFVFLLSSK 688
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++ R
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 653 QVYKQQLSNIAV 664
Q +KQ LS+ V
Sbjct: 749 QSHKQSLSSCVV 760
>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
Length = 852
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 282/552 (51%), Gaps = 79/552 (14%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTI 190
L HQ EGVKFLYK + +G I+ D+MGLGKT+Q IA L + + ++ TI
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPN--RDMILEKLEACG 245
K +I CPSS+++NW E +W I G + +++I+ +
Sbjct: 324 EK---------AIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWAS 374
Query: 246 VE-------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
V VLI S+++ R + L+ +++ DE HRLKN S + A +L + R
Sbjct: 375 VHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRR 434
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + E ++L ++ PG LG+R+ FR+ Y+ P+ G+ E+ D +
Sbjct: 435 VILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAK 494
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ ++++RRT + + + K ++VVFC +S+ Q Y+ + PEI NK
Sbjct: 495 LAELAKIVNRFIIRRT-NDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEI----NK 549
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
L + PL + L++I NH +L+
Sbjct: 550 ILRGTGSQPLKAIGL------------------------LKKICNHPDLLNLT------- 578
Query: 479 QRKDAELASAVFGPDI---DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-K 534
+D E A+F P +L G + +S + GKM LE+++Y + D K
Sbjct: 579 --EDLEGCEALFPPGFIPRELRGRDRNIDSSLS-------GKMLVLERMLYQIKQETDDK 629
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTR 592
I+L S LD+ E+ +GY RLDG+ N RQ LVD FN P K VFL+S++
Sbjct: 630 IVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFND-PEKDAFVFLLSSK 688
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++ R
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 653 QVYKQQLSNIAV 664
Q +KQ LS+ V
Sbjct: 749 QSHKQSLSSCVV 760
>gi|300122947|emb|CBK23954.2| unnamed protein product [Blastocystis hominis]
Length = 787
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 173/592 (29%), Positives = 302/592 (51%), Gaps = 72/592 (12%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
EP +L G VP+ + L +Q++GV+++ KL+ GGI+ D+MGLGKTIQ I
Sbjct: 145 EPALLLPSGH----AVPSHLWEVLYPYQQKGVQWMLKLHGQLVGGIIADEMGLGKTIQII 200
Query: 174 AFLAAV--------FGKDESSDSTILKD-----------NKVDKKGYVLIICPSSVIQNW 214
L + G+D S KD N+ ++ LII P++++ +W
Sbjct: 201 VTLIVLKFTSELRRAGRDLLSLPLAEKDFPPNAAESLHLNESNRPS--LIIVPATLLGHW 258
Query: 215 EIEFSRWSTFNVSIYHGPNRDMILEKLEACGV---------------EVLITSFDSYRIH 259
E RW S+ + +LE + +V+IT+++ +R
Sbjct: 259 IRELHRWCPLLRSVVLHNSSQSVLEGETLASILQQSEQQQQKKKNRYDVIITTYEGFR-K 317
Query: 260 GSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDW 319
S+ NW ++DE ++KN K + C +L+T +R+ ++GT +QN + EL++L D+
Sbjct: 318 SSLYRRTNWFYAVLDEGGKIKNAKVTIAQECKKLRTVHRVLISGTPLQNNLKELWSLIDF 377
Query: 320 VAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKE--- 376
V PG LGT E F + P+ G A + + + L + Y+LRR K+
Sbjct: 378 VFPGRLGTLEAFVSAFVVPISRGIYSNASAKAANLGYQCSLILQDSISPYILRRLKKVDF 437
Query: 377 ------ETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC-LINKDLPCSCGSPLT 429
+ + + K + V+ C +S Q++ Y L+ +Q LI + +P L
Sbjct: 438 DIVDDNQDVKKELPPKTEQVLSCLLSPEQEKCYLEYLKSDLVQASLIGRSMPFKAIIRLR 497
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
Q+ C + ++N + + P+D+P + + V
Sbjct: 498 QI--------------CNHPVFFRLFHTETTVTNPIYRSEETPKDDPSGL---SPTSHEV 540
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
F + G+++ + D + KM + ++++ W +G K+L+++ +V ML I+
Sbjct: 541 FNDE----AGDSEMDIDFDAVDWRESSKMIVMNEVLHIWKKEGHKVLIYTQTVSMLTIIM 596
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIF 609
K++ + +S+ +DGSTP RQ+LVD FNS P+ +FL++TR GGLG+NLV A+RV++F
Sbjct: 597 KYVEEQHFSYCMMDGSTPVVKRQALVDLFNSDPTIFLFLLTTRVGGLGINLVGADRVILF 656
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
DP+WNP+ D+QA++R +R GQ+R V ++RL+++G++EE +Y RQ++K LSN
Sbjct: 657 DPDWNPSVDIQARERCWRIGQQRPVTIYRLITSGTIEEKIYHRQIFKTVLSN 708
>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
Length = 1469
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 194/647 (29%), Positives = 321/647 (49%), Gaps = 81/647 (12%)
Query: 54 RLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQ--FDHTG 111
R+G + + P +P E A V DD+ KE+ + K + + + + H
Sbjct: 130 RIGTVF-VARPLHDPSG--EFAIVLYDPTVDDKPIPKEEAEPKLSQTEKKELEAPLVHKS 186
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGD 162
E L L K E +VP I+ RL + HQ EGVKFLY+ + +G I+ D
Sbjct: 187 LAEILGLKKKVENERPRVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMAD 246
Query: 163 DMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
+MGLGKT+Q IA + + + ++ TI K +I CPSS+++NW E +W
Sbjct: 247 EMGLGKTLQCIALMWTLLKQSPDAGKPTIQK---------CVIACPSSLVRNWANELVKW 297
Query: 222 ----STFNVSIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWE 269
+ +I +++ +++++ + VLI S+++ R++ +
Sbjct: 298 LGKDAITPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIG 357
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
+++ DE HRLKN +S + A L + R+ L+GT +QN + E + L ++ P LGTR
Sbjct: 358 LLLCDEGHRLKNGESLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRM 417
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
FR+ Y+ P+ G+ + ++ +ER L+ ++ K+++RRT + +L + K ++
Sbjct: 418 EFRKQYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIRRTNDILSKYLPV-KYEH 476
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
VVFC ++ QK Y ++ P++Q L+ PL + K+L N
Sbjct: 477 VVFCNLAPFQKDLYNHFIKSPDVQSLLRG----KGSQPLKVIGMLKKLCN---------- 522
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
P L+ L + E + P+ + D + +D E+
Sbjct: 523 --HPDLLNLPEDLPGCEDVLPDDFVQKDARGRDREVK----------------------- 557
Query: 510 SDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
V GKM L++++ A DKI+L S + LD+ +GY RLDG+
Sbjct: 558 --VWYSGKMAVLDRMLARIRAETNDKIVLISNYTQTLDLFAALCRSRGYGALRLDGTMNV 615
Query: 569 NLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
+ RQ LVD FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R
Sbjct: 616 SKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWR 675
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
GQK+ V+R ++ G++EE V+ RQ +KQ LS+ V S + +R+F
Sbjct: 676 DGQKKDCFVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
Length = 910
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 290/580 (50%), Gaps = 78/580 (13%)
Query: 113 FEPLVLSKDGEYPIIQVPASINCRLL-----EHQREGVKFLYKLYKNKHGG------ILG 161
EPL+L + E + V + LL HQREGV+F++ HG IL
Sbjct: 151 IEPLILWQSEEDGMSNVTTIMVHSLLVQFLRPHQREGVQFMFDCVSGLHGSENINGCILA 210
Query: 162 DDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
DDMG GKT+Q+I L + + + K +I+ P+S++ NWE E +W
Sbjct: 211 DDMGFGKTLQSITLLYTLLCQGFDGTPMVKK---------AIIVTPTSLVSNWEAEIKKW 261
Query: 222 STFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEIVIV 273
+ + RD +L +++ ++VLI S++++R+H S + + +++I
Sbjct: 262 VGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLIC 321
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHRLKN+++ A L + R+ L+GT MQN + E + + ++ PGSLG HFR
Sbjct: 322 DEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRH 381
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+Y+ P+ G+ TA E +A +R L + + +++LRRT HL K VV C
Sbjct: 382 YYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHL-PPKIIEVVCC 440
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
M+ LQ Y + +K+L + Q + VL
Sbjct: 441 KMTTLQSTLYNHFIS--------SKNLKRALADNAKQTK------------------VLA 474
Query: 454 CLVKLQQISNHLELIKPNPRD--------EPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
+ L+++ NH +LI + E + AE+ S G GG+ +
Sbjct: 475 YITALKKLCNHPKLIYDTIKSGSPGTVGFENCLEFFPAEMFSGRSGA---WTGGDG---A 528
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
++ LS GKM L +L+ + K D+I+L S + LD+ + + Y F RLDG
Sbjct: 529 WVELS-----GKMHVLSRLLANLRRKTNDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDG 583
Query: 565 STPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQ 622
ST + RQ LV+ N P+K FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA
Sbjct: 584 STTISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAA 642
Query: 623 DRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
R +R GQK+ V V+R LS G++EE VY RQ+ K+ L +
Sbjct: 643 ARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKV 682
>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 815
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 298/586 (50%), Gaps = 80/586 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I+ +
Sbjct: 209 RVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMWT 268
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T+++ +I CPSS++ NW E +W + ++ ++
Sbjct: 269 LLKQSPEAGKTLIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 320
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ +++ + VLI S+++ R++ L + +++ DE HRLKN+ S
Sbjct: 321 TELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLT 380
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L ++ P LG++ FR+ ++ P+ G+
Sbjct: 381 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAA 440
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ + DE L ++ K+++RRT + +L + K ++VVFC +S Q Y
Sbjct: 441 GSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPV-KYEHVVFCNLSQFQLDLYNHF 499
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 500 IQSPEIRSL------------------------LRGKGSQP----LKAIGLLKKLCNH-- 529
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
PD +L F D V A+ D+KS GKM L+++
Sbjct: 530 ---------PDLLNLSTDLPGCEFAFPEDYVPPEARGRD----RDIKSWYSGKMMVLDRM 576
Query: 525 MYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ DKI+L S + LD+ EK +GY RLDG+ N RQ LVD FN+
Sbjct: 577 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 636
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 637 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 696
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
GS+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 697 GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 742
>gi|448097434|ref|XP_004198673.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380095|emb|CCE82336.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 287/553 (51%), Gaps = 83/553 (15%)
Query: 121 DGEYPIIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
D + + + P+ I +L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL +
Sbjct: 114 DAQTVLTESPSYIKGGQLREYQIQGLNWLISLYENRLNGILADEMGLGKTLQTISFLGYL 173
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RD 235
LK G ++I P S + NW EF+ W+ N+ + G ++
Sbjct: 174 ---------RYLKH----IPGPFIVIVPKSTLDNWRREFAAWTPDVNILVLQGAKEERQN 220
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I E+L + +V+ITSF+ + L + W+ ++VDEAHR+KNE S L E +
Sbjct: 221 LIQERLLSTDFDVVITSFEMVIRERAHLRKFRWQYIVVDEAHRIKNEDSSLSQILREFYS 280
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
+NR+ +TGT +QN + EL+ L +++ P G E F E+++ Q+ +
Sbjct: 281 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSELFDEWFENQSGDSQQEREKNQ----- 335
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D+ Q L +L +LLRR K + L+ E N V+ M+D+Q + YR+LL+
Sbjct: 336 DKVVQQLHKLLSPFLLRRVKSDVETSLLPKIETN-VYIGMTDMQIQWYRKLLE------- 387
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNP 472
KD+ G + + E RL N+ +++L++ NH L +P P
Sbjct: 388 --KDIDAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGP 430
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D+ V + GKM L+K++ + +G
Sbjct: 431 PYTTDEHL-------------------------------VYNAGKMIILDKMLKKFQKEG 459
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLIST 591
++L+FS R+LDILE + + Y++ R+DGST R S +DDFN+ S K +FL++T
Sbjct: 460 SRVLIFSQMSRLLDILEDYCYLRDYNYCRIDGSTSHEDRISSIDDFNAPDSDKFIFLLTT 519
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V
Sbjct: 520 RAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTENAIEEKVLD 579
Query: 652 RQVYKQQLSNIAV 664
R K +L + +
Sbjct: 580 RAAQKLRLDKLVI 592
>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 811
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 298/586 (50%), Gaps = 80/586 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I+ +
Sbjct: 205 RVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMWT 264
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T+++ +I CPSS++ NW E +W + ++ ++
Sbjct: 265 LLKQSPEAGKTLIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 316
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ +++ + VLI S+++ R++ L + +++ DE HRLKN+ S
Sbjct: 317 TELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLT 376
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L ++ P LG++ FR+ ++ P+ G+
Sbjct: 377 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAA 436
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ + DE L ++ K+++RRT + +L + K ++VVFC +S Q Y
Sbjct: 437 GSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPV-KYEHVVFCNLSQFQLDLYNHF 495
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 496 IQSPEIRSL------------------------LRGKGSQP----LKAIGLLKKLCNH-- 525
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
PD +L F D V A+ D+KS GKM L+++
Sbjct: 526 ---------PDLLNLSTDLPGCEFAFPEDYVPPEARGRD----RDIKSWYSGKMMVLDRM 572
Query: 525 MYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ DKI+L S + LD+ EK +GY RLDG+ N RQ LVD FN+
Sbjct: 573 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 632
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 633 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 692
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
GS+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 693 GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 738
>gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein, partial
[Ascaris suum]
Length = 755
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 291/556 (52%), Gaps = 69/556 (12%)
Query: 137 LLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKF+Y +N +G I+ D+MGLGKT+Q I L + + + I
Sbjct: 163 LRPHQREGVKFMYDCTTGMRIENAYGCIMADEMGLGKTLQCITLLWTLLRQSPDAKPMIS 222
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K V+I+CPSS+++NW+ E ++W N ++ I LE+
Sbjct: 223 K---------VVIVCPSSLVKNWDKEIAKWLGGRVNSLPIDSGGKEEIDRNLESFLSQMG 273
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C VLI S++++R+H +L +VI DE HRLKN ++ Y A LK R+ +
Sbjct: 274 SRCSTPVLIISYETFRLHAEVLLRKEVGLVICDEGHRLKNSDNQTYQALSGLKCERRVLI 333
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E Y+L ++V PG LGT + F+ ++ + G+ A + DE
Sbjct: 334 SGTPIQNDLLEYYSLVNFVNPGLLGTAQEFKRRFENVILRGRDADATDAQRAKGDEALAE 393
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
+ +++ K ++RRT +L + K + +V C ++DLQ++ Y++L+
Sbjct: 394 MASIVNKCIIRRTSSLLTKYLPV-KYELIVCCKLTDLQEKLYQKLIS------------- 439
Query: 422 CSCGSPLTQVECCKRL-DNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
KRL ++ D L + L+++ NH +L+ DK +
Sbjct: 440 ------------SKRLKEDTSRSDGKITGTALSFITNLKKLCNHPQLVY-------DKCQ 480
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILLFS 539
K+ E F ++L +++F + GKM+ L+ L+ + + DK +L S
Sbjct: 481 KNEE----GFQGCLELFPSGFSDKTF----EPAFSGKMKVLDYLLAVTKQTTNDKFVLVS 532
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGL 598
+ +D + + Y + RLDGS+ R +V+ FN + S+ VFL+S++AGG GL
Sbjct: 533 NYTQTIDSFVELCKLRRYGYVRLDGSSSIKQRAKIVEKFNDPTSSEYVFLLSSKAGGCGL 592
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+H ++RLL+ G++EE ++ RQ +K+
Sbjct: 593 NLIGANRLVMFDPDWNPANDDQAMARIWRDGQKKHCFIYRLLATGTIEEKMFQRQTHKKA 652
Query: 659 LSNIAVSGKLE-KRYF 673
LS+ V +++ R+F
Sbjct: 653 LSSCVVDEEVDVARHF 668
>gi|357608812|gb|EHJ66159.1| putative DNA excision repair protein ERCC-6 [Danaus plexippus]
Length = 734
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 263/506 (51%), Gaps = 65/506 (12%)
Query: 164 MGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-S 222
MGLGKT+Q IAFLA + D S + G +I+ P++VI W F W
Sbjct: 1 MGLGKTVQVIAFLAGLSMTDSGSWGGL---------GPCIILSPATVIYQWVSHFHYWFP 51
Query: 223 TFNVSIYH------GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
V++ H G + +I + + G+ +L+T + +LS W +I+DE
Sbjct: 52 QIRVAVLHHSGSHAGSHHKLIRDMHSSHGI-LLVTYAGIVKYIKDLLSR-KWHYIILDEG 109
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
H+++N +++ +T +++ +TG+ MQN + EL++LFD++ PG LG+ F E +
Sbjct: 110 HKIRNPDTQVSKMVKRFETSHKLLITGSPMQNSLQELWSLFDFMRPGLLGSHTAFMEHFA 169
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTM 395
P+ G A E A E + L ++ Y+LRRTK E H+ + K + V+FC++
Sbjct: 170 VPITQGGYANASEFQEATALEIAKALKNLITPYMLRRTKTEVQDHIQLPEKNEQVLFCSL 229
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+ QK Y L I+ +++KD G P+ +L L
Sbjct: 230 TQEQKDLYMGYLMSSTIRSILDKD--SKHGEPMR-------------------ARILVAL 268
Query: 456 VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
L++I NH ++ +E D DID +SF + K
Sbjct: 269 STLRKICNHPDIYLYEAYEETD---------------DID-------EKSF---GNWKRS 303
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
GKM + L+ W +G + L+F+ S ML ILE+ L + + R+DGS +RQ+L+
Sbjct: 304 GKMSVVHSLLKIWLKQGHRALIFTQSRAMLCILEQHLQNHSFKYLRMDGSVNVGVRQNLI 363
Query: 576 DDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVI 635
+N +P VFL +TR GGLG+NL A+RV+I+DP+WNPA D QA++R++R GQ+R+V
Sbjct: 364 KTYNENPEYLVFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQERNVT 423
Query: 636 VFRLLSAGSLEELVYTRQVYKQQLSN 661
V+RLLSAG++EE +Y RQ++K LSN
Sbjct: 424 VYRLLSAGTIEEKIYQRQIFKNFLSN 449
>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
guttata]
Length = 919
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 280/541 (51%), Gaps = 56/541 (10%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q IA + + + +L
Sbjct: 302 LRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPVL 361
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLI 250
K L++ P S+++NW+ EF +W + ++ + E + + V+I
Sbjct: 362 KR--------ALVVTPGSLVKNWKKEFQKWLGNERIKVFAVDQDHKVEEFISSPLYSVMI 413
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + V + ++I DE HRLKN K A L RI LTGT +QN +
Sbjct: 414 ISYEMLLRSSDQIEAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDL 473
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E Y L ++V PG LG+ +R+ Y+EP+ + +A E + ++R L + ++
Sbjct: 474 QEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFI 533
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K+++++FC + LQ YR+LL GS +
Sbjct: 534 LRRT-QEVINKFLPPKKESIIFCRPTALQLELYRKLL-----------------GSRVIT 575
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH----LELIKPNPRDEPDKQRKDAELA 486
RL+N P L C+ L+++ NH + IK D ++ ++ L
Sbjct: 576 SCLQGRLEN------SPH---LICIGALKKLCNHPCLLFKAIKEKSCDPMSEEYDESSLY 626
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGDKILLFSYSVRM 544
V ID+ + +++F GK++ L KL+ + + ++++L S +
Sbjct: 627 EGV----IDVFPQDYTSDTFCETDS----GKLQVLVKLLAAIHELNSSERVVLVSNYTQT 678
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
L++L+ GYS++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNLV A
Sbjct: 679 LNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGA 738
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ ++++D +WNPA D+QA R +R GQK V ++RLL+ GS+EE +Y RQ+ KQ LS
Sbjct: 739 SHLILYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGSIEEKIYQRQISKQDLSGAV 798
Query: 664 V 664
V
Sbjct: 799 V 799
>gi|212534786|ref|XP_002147549.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
18224]
gi|210069948|gb|EEA24038.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
18224]
Length = 1115
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 287/574 (50%), Gaps = 91/574 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PAFIKGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACG 245
+ G LI P S + NW++EF++W+ NV + G ++I E+LE
Sbjct: 229 ---RHICGITGPHLIAVPKSTLHNWKMEFAKWTPEVNVMVLQGSKEERHELITERLEKED 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMILKEKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRVFHSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G + F +++ D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQESD-------------QDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N +F MSD+Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKSDVEKSLLPKKEVN-LFVGMSDMQVKWYQKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 485
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+K++ +G ++L+FS
Sbjct: 486 -----------------------------VDNSGKMVVLDKILNRMKKQGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + + + R+DGST R + +D++N S K +FL++TRAGGLG+NL
Sbjct: 517 RVLDILEDYCVFREHKYCRIDGSTAHEDRIAAIDEYNKEGSDKFIFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV+FD +WNP DLQA DR+ R GQK+ V+VFR ++ ++EE V R K +L
Sbjct: 577 TADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQ 636
Query: 662 IAVSGKLEKRYFEGVQDCKEFQGEL-FGICNLFR 694
+ + ++ + + G + FG ++F+
Sbjct: 637 LVIQQGRAQQQTKNAASKDDLLGMIQFGAADVFK 670
>gi|190347724|gb|EDK40055.2| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC
6260]
Length = 990
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 284/549 (51%), Gaps = 98/549 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ PA ++ +L E+Q +G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 128 FVDSPAYVHGKLREYQIQGLNWLVSLHENNLSGILADEMGLGKTLQTISFLGYL------ 181
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMILEKL 241
I K N G L++ P S + NW EF+RW+ +V + G D+I +L
Sbjct: 182 --RYIKKIN-----GPHLVVVPKSTLDNWAREFARWTPEVHVLLLQGDKDTRHDLIQNRL 234
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C +V+I+S++ S + NW+ +++DEAHR+KNE S L ++NR+ +
Sbjct: 235 LECDFDVVISSYEIVIREKSAFRKFNWQYIVIDEAHRIKNEDSLLSQIVRMFHSKNRLLI 294
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK-- 359
TGT +QN + EL+ L +++ P G + F E++ +DE
Sbjct: 295 TGTPLQNNLHELWALLNFLLPDVFGDSDTFDEWFQ------------------SDEENLV 336
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
Q L VL+ +LLRR K + L+ KE N ++C M+D+Q+ Y+++L+ KD
Sbjct: 337 QQLHKVLKPFLLRRIKSDVEKSLLPKKELN-IYCGMTDMQRSWYQKILE---------KD 386
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEP 476
+ G+ + E RL N+ +++L++ NH E +P P
Sbjct: 387 IDAVNGA--NKKESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP---- 426
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
F D LV NA+ KM+ L++L+ + S+G ++L
Sbjct: 427 ------------PFTTDEHLV-YNAE--------------KMKILDQLLKKFQSEGSRVL 459
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS RMLDILE + + + + R+DG T R + +D++N S++ VFL++TRAGG
Sbjct: 460 IFSQMSRMLDILEDYCAFREFQYCRIDGQTDHADRVNAIDEYNKPGSEKFVFLLTTRAGG 519
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SA+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 520 LGINLTSADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERAAQ 579
Query: 656 KQQLSNIAV 664
K +L + +
Sbjct: 580 KLRLDQLVI 588
>gi|365986577|ref|XP_003670120.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
gi|343768890|emb|CCD24877.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
Length = 1115
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 312/608 (51%), Gaps = 94/608 (15%)
Query: 121 DGEYPIIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
D E + + P+ I N +L ++Q +G+ +L L++NK GIL D+MGLGKT+QTI+FL +
Sbjct: 161 DDENYVNESPSFIQNGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYL 220
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRD 235
+K K+D G LII P S + NW EF++W+ N I HG
Sbjct: 221 ---------KYIK--KID--GPFLIIVPKSTLDNWRREFNKWTPEVNAIILHGDKETRHK 267
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I + + +VLITS++ + L +V W+ +++DEAHR+KNE+S+L L +
Sbjct: 268 IIYDFILQARFDVLITSYEMVIKEKNALKKVAWQYIVIDEAHRIKNEESQLSQIIRLLYS 327
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
++R+ +TGT +QN + EL+ L +++ P G F ++++ Q + ++ I +
Sbjct: 328 KHRLLITGTPLQNNLHELWALLNFLLPDVFGDSGIFDDWFE------QNNSEQDQEIVV- 380
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
Q L VL +LLRR K + L+ E NV + M+D+Q + Y+ LL+
Sbjct: 381 ----QQLHTVLNPFLLRRIKADVEKSLLPKIETNV-YVGMTDMQIKWYKSLLE------- 428
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNP 472
KD+ G+ + + E RL L +++L++ NH E +P P
Sbjct: 429 --KDIDAVNGA-VGKREGKTRL--------------LNIVMQLRKCCNHPYLFEGAEPGP 471
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D+ VF + GKM L+KL+ KG
Sbjct: 472 PYTTDEH--------LVF-----------------------NAGKMIVLDKLLKRLKEKG 500
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLIST 591
++L+FS R+LDILE + +G+++ R+DGST R +DD+N S K VFL++T
Sbjct: 501 SRVLVFSQMSRLLDILEDYCYFRGFNYCRIDGSTSHEDRIEAIDDYNKPDSDKFVFLLTT 560
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLG+NLV+A+ VV+FD +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V
Sbjct: 561 RAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIE 620
Query: 652 RQVYKQQLSNIAV---SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIES 708
R K +L + + +GK D E +G ++F + ++ T I+
Sbjct: 621 RAAQKLRLDQLVIQQGTGKKTANIGNNKDDLLEMIQ--YGAKSMFEKKATHITTDADIDE 678
Query: 709 HEEQGQQQ 716
++GQQ+
Sbjct: 679 ILKKGQQK 686
>gi|123977054|ref|XP_001330700.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121897443|gb|EAY02564.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 822
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 271/548 (49%), Gaps = 89/548 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L HQR + +L+ L+K K GGI GD+MGLGKT F+A+ +++ N +
Sbjct: 174 LFPHQRGAIDWLWGLFKQKAGGIEGDEMGLGKTCICATFIAS-----------LIQCNLI 222
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGP------NRDMILEKLEACGVEVL 249
K +LI+CP +V Q W E W F SI YH +R+ IL ++E ++
Sbjct: 223 KKP--ILIMCPLTVCQQWIRELHIWCPFVKSILYHDTRTNKKISREEILRQVEGT-TNII 279
Query: 250 ITSFDSYRI--HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+T++ S + L ++W +I DEAH ++N K+++ +L R+ +TG+ +Q
Sbjct: 280 VTNYQSVTSLKDDTSLQIIDWSCIICDEAHNIRNHKTEISQVVKKLTADFRLAVTGSPIQ 339
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N ++EL+++FD+ PG LG F++ + +P+K G A + A Q L +++
Sbjct: 340 NDLLELWSIFDFAYPGLLGAFNVFQQEFADPIKQGGYANASSFEVFRAYSSAQALRDLIK 399
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
YLLRR K + +L K + + FC ++ Q Y L+ P +Q + N
Sbjct: 400 PYLLRRLKSQVNANL-PAKTEQIFFCQLTQTQINCYEEFLKSPTVQAIFN---------- 448
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+G D + P +V LQ+I NH PN DE
Sbjct: 449 -------------NGAD------MFPGMVLLQEICNH-----PNIFDEQKYS-------- 476
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
++ K K + L K++ W +G + LLF+ S++ML I
Sbjct: 477 ----------------------TNPKMSCKTKLLMKILPQWHKEGHRCLLFAQSLKMLSI 514
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
LE+ + F R+DG TP R ++D FN K L+S + GGLG+NL A+RV+
Sbjct: 515 LEEIMTNLNLEFFRMDGDTPPERRIVIMDRFNHG-DKFACLLSKKVGGLGINLTGADRVI 573
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
I +P+WNP+ D QA +R++R GQ + V V+RL+ G++EE +Y +Q++KQ LSN +
Sbjct: 574 IIEPDWNPSTDEQALERAYRIGQTKSVSVYRLICVGTIEEKIYKKQIFKQILSNTIMQDA 633
Query: 668 LEKRYFEG 675
+KR F
Sbjct: 634 RQKRLFNA 641
>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 831
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 294/573 (51%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ +G I+ D+MGLGKT+Q IA +
Sbjct: 225 RVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLVDPKANGCIMADEMGLGKTLQCIALMWT 284
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + ++ TI K +I CPSS+++NW E +W N G +
Sbjct: 285 LLRQSPDAGKPTIQK---------CVIACPSSLVKNWANELVKWLGKDAINPFAVDGKAS 335
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
++ ++++L + VLI S+++ R++ L +++ DE HRLKN++S
Sbjct: 336 KEELIQQLRQWSIASGRAVVRPVLIVSYETLRLYVDELKSTPIGLLLCDEGHRLKNDESL 395
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L + R+ L+GT +QN + E + L ++ P LGT+ FR+ Y+ P+ G+
Sbjct: 396 TFTALNNLNVQKRVILSGTPIQNDLSEYFALLNFANPNYLGTKNDFRKRYELPILRGRDA 455
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
+ ++ DER L+ ++ K+++RRT + + + K ++VVFC ++ Q+ Y
Sbjct: 456 DGTDEDRKLGDERLSELLTLVNKFIIRRT-NDILSKYLPRKYEHVVFCNLAPFQRDLYNL 514
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
++ PEIQ L L G S P L + L+++ NH
Sbjct: 515 FIKSPEIQQL------------------------LRGKGSQP----LKAINILKKLCNHP 546
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
+L+ P D P S PD D V +A+ DVKS GKM L++
Sbjct: 547 DLLD-LPGDLP---------GSESCFPD-DFVPKDARGRD----RDVKSWYSGKMAVLDR 591
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN
Sbjct: 592 MLARIRQDTNDKIVLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPE 651
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
+ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R +
Sbjct: 652 GPEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIG 711
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 712 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 744
>gi|222629845|gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group]
Length = 1678
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 206/697 (29%), Positives = 342/697 (49%), Gaps = 83/697 (11%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L HQREG+++L+ L+ GGILGDDMGLGKT+Q AFLA +F S
Sbjct: 272 LPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLF------HS 325
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVE 247
++K VL++ P +++ +W E S S + + Y GPN + +L+ E
Sbjct: 326 RLIK--------RVLVVAPKTLLTHWTKELSVVSLKDKIRDYSGPNANARNYELKYAFKE 377
Query: 248 --VLITSFDSYR-----IHGSILSEVN------WEIVIVDEAHRLKNEKSKLYMACLELK 294
+L+T++D R I G+ ++ + W VI+DE H +KN K++ + E+
Sbjct: 378 GGILLTTYDIVRNNFKMIKGNFTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIP 437
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
+RI ++GT +QN + E++ LF + P LG +E F+ Y+ + G A R I
Sbjct: 438 CAHRIVISGTPIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHI 497
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMG-------KEDNVVFCTMSDLQKRAYRRLL 407
+ L ++ Y LRR K E G K + +++ ++ Q++ Y
Sbjct: 498 GSNVAKELRERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLY---- 553
Query: 408 QLPEIQCLINKDLPCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ +N +L S GSPL + K++ CD P L+ + L
Sbjct: 554 -----EAFLNSELVHSSMQGSPLAAITILKKI-----CDH-------PLLLTKKAAEGVL 596
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E + ++ + + A D D V E +G DV SC K+ + L+
Sbjct: 597 EGMDAMLNNQEMGMVEKMAMNLADMAHDDDDV------ELQVG-QDV-SC-KLSFMMSLL 647
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+ S+G +L+FS + +ML+I+++ +I +GY F R+DG+T + R+ +V DF P
Sbjct: 648 QNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRIDGTTKISERERIVKDFQEGPGAP 707
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+FL++T+ GGLGL L A RV++ DP WNP+ D Q+ DR++R GQ + VIV+RL+++G++
Sbjct: 708 IFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVDRAYRIGQMKDVIVYRLMTSGTI 767
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
EE +Y QV+K L A K + RYF ++ Q ELF + D+S T +
Sbjct: 768 EEKIYKLQVFKGALFRTATEHKEQTRYFSK----RDIQ-ELFSLPEQGFDVS---LTQKQ 819
Query: 706 IESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSK---TRKSSDPEMARTSK 762
++ EE GQQ + + LE ++ ++LL + + T +D +R +
Sbjct: 820 LQ--EEHGQQLVMDDSLRKHIQFLEQQGIAGVSHHSLLFSKTAILPTLNDNDGLDSRRAM 877
Query: 763 PLLEDMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLS 799
P+ + Y + D V + K +E I + S
Sbjct: 878 PMAKH---YYKGASSDYVANGAAYAMKPKEFIARTYS 911
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 135/263 (51%), Gaps = 22/263 (8%)
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
SC K+ + L+ + +G +L+FS + ML++++ + +G+ F R+DG+T + R+
Sbjct: 1299 SC-KIAFILPLLRNLVEEGHYVLIFSQTRVMLNLIQDAVSIEGHKFLRIDGTTKISERKK 1357
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
++ DF + L+++ GGLG L A+RV++ DP WNP+ D Q+ DR++R GQ +
Sbjct: 1358 ILKDFQEGLDSPILLLTSHVGGLGNTLTKADRVIVVDPAWNPSIDNQSVDRAYRIGQTKD 1417
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
VIV+RL++ G++EE +Y +Q++K L A K + +++ QD Q E +
Sbjct: 1418 VIVYRLVTCGTIEEKIYKQQIFKGGLFRTATECKEQPQFYN--QDLY-LQNE-----QEY 1469
Query: 694 RDLSDNLFTSEIIES--HEEQGQQ--------QERHHCTNQGFKGLETHIV---SSKDSN 740
L + F + + + E GQQ + QG G+ H V ++ +
Sbjct: 1470 SSLPPHGFDASLTQHKMQVENGQQLVMDESLKKHIQFLEQQGIAGVNRHGVLFCKTETTA 1529
Query: 741 TLLSTGSKTRKSSDPEMARTSKP 763
TL G+ RK D + R P
Sbjct: 1530 TLGDDGAINRKVRDIMVRRCYAP 1552
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
+++P + L HQR+G+ +L+ L+ GGIL DDMGLGKTIQ L +
Sbjct: 1089 MKIPRRVLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQEGGILLTSY 1142
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI-MELYNLF 317
W+ VI+DE H +KN K++ + ++ + +RI LTGT +QNK+ LY F
Sbjct: 1170 WDYVILDEGHIVKNTKTQRAQSLFQIPSAHRIVLTGTPIQNKLKRRLYEAF 1220
>gi|343429051|emb|CBQ72625.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 871
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 308/613 (50%), Gaps = 78/613 (12%)
Query: 87 EKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLE----HQR 142
E ++EQ E+ Q H + L L+K+ I ++P I+ RL + HQ
Sbjct: 233 EIQQEQAAEEARIEDGAAPQTPHKSLADILGLNKNKTKEIEKLPVVIDPRLGKVLRPHQV 292
Query: 143 EGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVD 197
EGVKFLY+ + +N G I+ D+MGLGKT+Q I + + + S I K +D
Sbjct: 293 EGVKFLYRCTTGLVVENAFGCIMADEMGLGKTLQCITLMWTLLKQ-----SPIPKKTTID 347
Query: 198 KKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE--------ACG 245
K +I+CPSS+++NW E +W + N+++ ++D ++E A
Sbjct: 348 K---CIIVCPSSLVRNWANELVKWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGRAIT 404
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
V+I S+++ R L +++ DE HRLKN S + A ++K R R+ L+GT
Sbjct: 405 QPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTP 464
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + E + L ++ P LG+R FR+ ++ + G+ A ++ + A+E+ L A+
Sbjct: 465 IQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATDKQQQEANEKLSQLSAL 524
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
+ ++++RRT + +L + K ++VVFC MS Q YR ++ PEI+ L+ +
Sbjct: 525 VSRFIIRRTNDLLSKYLPV-KYEHVVFCKMSPFQLDLYRLFIRSPEIKKLLRG----TGS 579
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
PL + K+L N P L+ L E P D+++ + EL
Sbjct: 580 QPLKAIGILKKLCN------------HPDLLDLPSDLEGSEEYFPEGYTPRDRRQVNPEL 627
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRM 544
+ GKM L++ + + A+ DKI+L S +
Sbjct: 628 S-----------------------------GKMMVLQRFLETIRATTNDKIVLISNYTQT 658
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
LD+ E+ + RLDG+ N RQ LVD FN K+ +FL+S++AGG GLNL+ A
Sbjct: 659 LDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGA 718
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
NR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE + RQ +KQ LS+
Sbjct: 719 NRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCV 778
Query: 664 VS-GKLEKRYFEG 675
V + R+F G
Sbjct: 779 VDEAQDAARHFSG 791
>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
Length = 682
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 298/586 (50%), Gaps = 80/586 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I+ +
Sbjct: 76 RVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMWT 135
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T+++ +I CPSS++ NW E +W + ++ ++
Sbjct: 136 LLKQSPEAGKTLIQK--------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASK 187
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ +++ + VLI S+++ R++ L + +++ DE HRLKN+ S
Sbjct: 188 TELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLT 247
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ L+GT +QN + E + L ++ P LG++ FR+ ++ P+ G+
Sbjct: 248 WTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAA 307
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
+ + DE L ++ K+++RRT + +L + K ++VVFC +S Q Y
Sbjct: 308 GSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPV-KYEHVVFCNLSQFQLDLYNHF 366
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 367 IQSPEIRSL------------------------LRGKGSQP----LKAIGLLKKLCNH-- 396
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
PD +L F D V A+ D+KS GKM L+++
Sbjct: 397 ---------PDLLNLSTDLPGCEFAFPEDYVPPEARGRD----RDIKSWYSGKMMVLDRM 443
Query: 525 MYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ DKI+L S + LD+ EK +GY RLDG+ N RQ LVD FN+
Sbjct: 444 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 503
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 504 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 563
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
GS+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 564 GSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 609
>gi|146414908|ref|XP_001483424.1| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC
6260]
Length = 990
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 286/549 (52%), Gaps = 98/549 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ PA ++ +L E+Q +G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 128 FVDSPAYVHGKLREYQIQGLNWLVSLHENNLSGILADEMGLGKTLQTISFLGYL------ 181
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMILEKL 241
I K N G L++ P S + NW EF+RW+ +V + G D+I +L
Sbjct: 182 --RYIKKIN-----GPHLVVVPKSTLDNWAREFARWTPEVHVLLLQGDKDTRHDLIQNRL 234
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
C +V+I+S++ S + NW+ +++DEAHR+KNE S L ++NR+ +
Sbjct: 235 LECDFDVVISSYEIVIREKSAFRKFNWQYIVIDEAHRIKNEDSLLSQIVRMFHSKNRLLI 294
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK-- 359
TGT +QN + EL+ L +++ P G + F E++ +DE
Sbjct: 295 TGTPLQNNLHELWALLNFLLPDVFGDSDTFDEWFQ------------------SDEENLV 336
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
Q L VL+ +LLRR K + + L++ K++ ++C M+D+Q+ Y+++L+ KD
Sbjct: 337 QQLHKVLKPFLLRRIKSD-VEKLLLPKKELNIYCGMTDMQRSWYQKILE---------KD 386
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEP 476
+ G+ + E RL N+ +++L++ NH E +P P
Sbjct: 387 IDAVNGA--NKKESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP---- 426
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
F D LV NA+ KM+ L++L+ + S+G ++L
Sbjct: 427 ------------PFTTDEHLV-YNAE--------------KMKILDQLLKKFQSEGSRVL 459
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS RMLDILE + + + + R+DG T R + +D++N S++ VFL++TRAGG
Sbjct: 460 IFSQMSRMLDILEDYCAFREFQYCRIDGQTDHADRVNAIDEYNKPGSEKFVFLLTTRAGG 519
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SA+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 520 LGINLTSADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERAAQ 579
Query: 656 KQQLSNIAV 664
K +L + +
Sbjct: 580 KLRLDQLVI 588
>gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1037
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 271/547 (49%), Gaps = 72/547 (13%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTI L T+L
Sbjct: 313 LREHQREGVKFLYECVMGLRDYNGEGAILADEMGLGKTLQTITLLW-----------TLL 361
Query: 192 KDNKVDKKGYV----LIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEAC 244
K N + + V LI+CP ++I NW EF +W V ++ R + +
Sbjct: 362 KQNFIYEAAPVVKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDD-KRKKLTDFTMGK 420
Query: 245 GVEVLITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
V+I ++ R + +L +IVI DE HRLK ++K A L T RI L+G
Sbjct: 421 AYNVMIIGYEKLRTVQEGLLKGHGIDIVIADEGHRLKTVQNKSGQAIQALNTAKRIILSG 480
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E + D V PG LGT ++F + ++ P+ Q+ A R I + R + L
Sbjct: 481 TPIQNDLSEFFAAVDLVNPGILGTYKNFMKEFEGPIVRSQQPEATIRDIEKGETRGEELR 540
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
+ ++LRRT + + + K + V+ C + +Q YR +L
Sbjct: 541 ELTSMFILRRTAD-ILSRYLPPKTEYVILCNPTSVQASIYRHVL---------------- 583
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
GSP+ Q L N +G F L L L+++ N L+ DEP Q
Sbjct: 584 -GSPIFQTA----LGNTEGA----FSL----LTILKKLCNSPSLLNAKTDDEP--QNSTV 628
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSV 542
+ P + F S GK+R L++L+++ S +KI++ S
Sbjct: 629 ATLLSTLSPSL--------RRQF----SPSSSGKIRVLDQLLHNLRTSTSEKIVIVSNYT 676
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNL 600
L++L L F RLDGSTPS+ RQSLVDDFN +P+ FL+S +AGG GLNL
Sbjct: 677 STLNLLGVLLTSLSLPFLRLDGSTPSSKRQSLVDDFNRAPASTCFAFLLSAKAGGTGLNL 736
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
A+R+V++D +WNPA DLQA R R GQKRH ++R++ G+LEE ++ RQV K L+
Sbjct: 737 TGASRLVLYDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQVTKIGLA 796
Query: 661 NIAVSGK 667
+ + K
Sbjct: 797 DSVMESK 803
>gi|410922411|ref|XP_003974676.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1289
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 306/593 (51%), Gaps = 95/593 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNK-HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L +QR+GV FLY LY++ GGIL DDMGLGKTIQ I+FL+ ++ DS ++K
Sbjct: 79 KLYNYQRQGVAFLYSLYRDGLKGGILADDMGLGKTIQVISFLSGMY------DSELVK-- 130
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACGVEVLI 250
+ L+I P+S+I NW EF++W+ V +HG + R L K++ G ++I
Sbjct: 131 ------HTLLIMPTSLITNWTKEFAKWTPGMRVKEFHGTSKGERSRNLGKVQRRGG-IVI 183
Query: 251 TSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ + LS N W+ VI+DEAH++K +K + + +++R+ LTGT
Sbjct: 184 TTYTMLMNNWQQLSSYNGKEFTWDYVILDEAHKIKTTTTKTAKSAYAIPSKHRVLLTGTP 243
Query: 306 MQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E+++LFD+ G+L GT + F+ Y+ P+ + A + ++L+
Sbjct: 244 VQNNLKEMWSLFDFACQGTLLGTAKTFKTEYENPITRAREKDATPGEKVLGSRMSENLMT 303
Query: 365 VLRKYLLRRTK---------------EETI--------------GHLM---MGKEDNVVF 392
+++ + LRRTK EET G +M K D +V+
Sbjct: 304 IIKPHFLRRTKADIRKNKVDSVYFCKEETTAKAHADIPETPQTSGAVMPTLTRKNDLIVW 363
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
+S +Q+ YR+ + L I K+L + SPL ++ K+L CD P L
Sbjct: 364 TYLSSIQEDIYRQFISLDHI-----KELLLTTRSPLAELTILKKL-----CDH-PRLLSA 412
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVG-GNAQNESFIGLSD 511
+ KL LE +R + L D + G N +E+ I S
Sbjct: 413 AAITKLG-----LE------------ERGENALVGDDTAVDAEAQGISNVSDETLISES- 454
Query: 512 VKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS-NL 570
GK+ L +L+ +G + L+F++ ++LDILE+ L +G+ RLDG+
Sbjct: 455 ----GKLVFLFRLLERLREEGCRTLVFAHYRKVLDILERILGNRGFKVMRLDGTIKQITE 510
Query: 571 RQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
R+ + F S VFL++T+ GG+G+ L +ANRVVI+DP+WNPA D QA DR++R GQ
Sbjct: 511 RERRISLFQMDRSYSVFLLTTQVGGVGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQ 570
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEF 682
+V+++RL++ G++EE +Y RQV+K L + K RYF Q+ KE
Sbjct: 571 TENVVIYRLITCGTVEEKIYRRQVFKDSLIRQSTGDKKNPFRYF-SKQELKEL 622
>gi|410905419|ref|XP_003966189.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Takifugu
rubripes]
Length = 1164
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 273/542 (50%), Gaps = 62/542 (11%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREG+ FLY+ G IL D+MGLGKT+Q++A + + ++
Sbjct: 553 LRPHQREGLIFLYECVMGMRAAGGSGAILADEMGLGKTLQSVALSWTLLKQGPYGGKPVV 612
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKLEACG 245
K VL++ P S++QNW EF++W F V H +L L +
Sbjct: 613 KR--------VLVVTPGSLVQNWGREFNKWLGRERIQVFTVDQDHRVEH-FVLSPLHS-- 661
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
VL+ S++ + +V + ++I DE HRLKN K A L R+ LTGT
Sbjct: 662 --VLVISYEMLLRCLDQVQKVEFGLIICDEGHRLKNSSIKTSSALNSLSCSRRVILTGTP 719
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + E Y + ++V PG LG+ +R+ Y+EP+ H ++ + E + +ER L +
Sbjct: 720 VQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQPSCTEEERVLGEERAAELSRL 779
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
++LRRT +E I + + D +FC S LQ Y+ LL + SC
Sbjct: 780 TGMFILRRT-QEIINRYLPPRLDWTLFCAPSPLQLELYKHLLCHRVFR---------SCL 829
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
TQ L C+ L+++ NH L+ ++ D ++
Sbjct: 830 QAATQTHT-----------------HLACITALKKLCNHPVLLYSTVQERTDNGSEEGSF 872
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGDKILLFSYSVR 543
+ +L G+ + G GK+ L L+ + S D++++ S +
Sbjct: 873 YEGL----AELFPGSYSS----GELTTADSGKLMVLSDLLGAIRRLSPSDRVVVVSNYTK 924
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
LD+LE + GY+F RLDG TP+ RQ LVD FNS+ S+ +FL+S++AGG+GLNLV
Sbjct: 925 TLDLLEDLCVAMGYTFCRLDGHTPTGQRQRLVDSFNSAYSQNFLFLLSSKAGGVGLNLVG 984
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ +V++D +WNPA D+QA R +R GQK+ V ++RLL+AG++EE V+ RQV KQ LS
Sbjct: 985 ASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERVFQRQVSKQGLSGT 1044
Query: 663 AV 664
V
Sbjct: 1045 VV 1046
>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 861
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 199/669 (29%), Positives = 340/669 (50%), Gaps = 89/669 (13%)
Query: 40 PRRPPKS-SLAQQLQRLGETYN-----FSLPQQNPETRREKAPVEKSNVFDDEEKEKEQE 93
P+RPP + L Q + + + F++ +P + +E++ +D +KE E++
Sbjct: 164 PKRPPPTLGLRQGAVFIAKALHDPSGEFAIVLYDPTIDEKPRSIEQAKKEEDAKKETEEK 223
Query: 94 QEKFGRHQLG-QFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCRLLE----HQREGVK 146
+ + L H E L + K +GE P +VP I+ RL + HQ EGVK
Sbjct: 224 DGELDKPVLKLDAPLAHKSLAEILGIKKVVEGERP--KVPVVIDPRLAKVLRPHQIEGVK 281
Query: 147 FLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGY 201
F+Y+ +G I+ D+MGLGKT+Q I + + +S+D+ NK
Sbjct: 282 FMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMWTLL--KQSTDAGKPTINKA----- 334
Query: 202 VLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLEACGVE--------VL 249
+I CPSS+++NW E +W + +I +++ ++++L + V+
Sbjct: 335 -IIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAIASGRSITRPVI 393
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S+++ R++ L +++ DE HRLKN S+ ++A L R+ L+GT +QN
Sbjct: 394 IVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNSLNVTRRVILSGTPIQND 453
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E ++L + PG LGTR FR+ Y+ P++ G+ ++ + DE + L+ V+ K+
Sbjct: 454 LTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQKGDECIKDLLNVVNKF 513
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
++RRT + +L + K ++VVFC+++ Q Y + P+I+ L
Sbjct: 514 IIRRTNDILSKYLPV-KYEHVVFCSLAPFQLDLYNHFITSPDIKAL-------------- 558
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
L G S P L + L+++ NH +L+ + D P ++
Sbjct: 559 ----------LRGKGSQP----LKAIGMLKKLCNHPDLLNLS-DDLPGCEK--------- 594
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKGDKILLFSYSVRMLD 546
+ P+ D V + + D+K GKM+ L++++ DKI+L S + LD
Sbjct: 595 YWPE-DYVPKDGRGRD----RDIKPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLD 649
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
+ +K +GY RLDG+ RQ LVD FN ++ VFL+S++AGG GLNL+ ANR
Sbjct: 650 MFDKLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANR 709
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++ RQ +KQ LS+ V
Sbjct: 710 LVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 769
Query: 665 SGKLEKRYF 673
S + +R+F
Sbjct: 770 SAEDVERHF 778
>gi|400601140|gb|EJP68783.1| SWI/SNF family of DNA-dependent ATPase [Beauveria bassiana ARSEF
2860]
Length = 1110
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 280/548 (51%), Gaps = 100/548 (18%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 175 PGFIQGQMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 224
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--------NRDMILEK 240
+ VD G L+I P S + NW+ EF+RW+ NV + G N ++ EK
Sbjct: 225 ---RHIVDITGPHLVIVPKSTLDNWKREFTRWTPEVNVLVLQGAKDERHELINSRLVDEK 281
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+
Sbjct: 282 FDVC-----ITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFTSRNRLL 336
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F +++ G+ R D Q
Sbjct: 337 ITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWF-----SGED--------RDQDTVVQ 383
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VLR +LLRR K + L+ KE N ++ MSD+Q + Y+++L+ KD+
Sbjct: 384 QLHRVLRPFLLRRVKSDVEKSLLPKKEVN-LYLGMSDMQIKWYQKILE---------KDI 433
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPD 477
G+ + E RL N+ +++L++ NH E +P P D
Sbjct: 434 DAVNGAG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTD 478
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ V + GKM+ L++L+ S+G ++L+
Sbjct: 479 EHL-------------------------------VYNAGKMKVLDRLLKRLQSQGSRVLI 507
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + + Y + R+DGST R + +D++N S++ VFL++TRAGGL
Sbjct: 508 FSQMSRLLDILEDYCVFREYKYCRIDGSTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGL 567
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ V+++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K
Sbjct: 568 GINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQK 627
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 628 LRLDQLVI 635
>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 974
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 274/536 (51%), Gaps = 62/536 (11%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 316 LREHQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 370
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLEACGVEVL 249
+ V KK LI+CP ++I NW+ EF +W V ++ R + + V+
Sbjct: 371 EAQPVVKKA--LIVCPVTLIDNWKKEFRKWLGNERVGVFVADAKRTRLTDFTMGKSYSVM 428
Query: 250 ITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R LS+ +IVI DE HR++ ++K A L T RI L+GT +QN
Sbjct: 429 IIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQN 488
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ E + + D+V PG LGT + F + ++ P+ ++ A E+ I + R + L +
Sbjct: 489 DLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLTSL 548
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + + +L K + V+FC + QK Y +L P QC
Sbjct: 549 FILRRTADILLKYL-PPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCA------------- 594
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
L +S L + L+++ N L+KP D+ A ++S
Sbjct: 595 -----------LGNSESA-----LQLITILKKLCNSPSLLKPRNSDQTPNSTLGALISS- 637
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDI 547
P + LS S GK+R L++L+++ + +K++L S LD+
Sbjct: 638 -LPPTV-----------LRHLSPA-SSGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDL 684
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGLNLVSANR 605
L FL F RLDGSTP + RQ LVDDFN S S V FL+S +AGG GLNL+ A+R
Sbjct: 685 LATFLTSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASR 744
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+++FD +WNPA D+QA R R GQKRH V+RL+ G+LEE ++ RQV K L++
Sbjct: 745 LILFDVDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLAD 800
>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus
ND90Pr]
Length = 812
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 299/580 (51%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
D E P +VP I+ RL + HQ EGVKFLY+ + +G I+ D+MGLGKT+Q
Sbjct: 198 DNERP--RVPVVIDPRLAKVLRPHQVEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQ 255
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
I + + + ++ STI K +I CPSS+++NW E +W +
Sbjct: 256 CITLMWTLLKQSPDAGKSTIQK---------CVIACPSSLVRNWANELVKWLGKDAVTPF 306
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ +++++ + VLI S+++ R++ + +++ DE HR
Sbjct: 307 AIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLRLYVDEFGQTPIGLMLCDEGHR 366
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S + A L + R+ L+GT +QN + E + L ++ PG LGTR FR+ ++ P
Sbjct: 367 LKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPGYLGTRMEFRKQFEIP 426
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ + ++ ER L+ ++ K+++RRT + +L + K ++VVFC ++
Sbjct: 427 ILKGRDANGTDADVQKGTERLTELLGLVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 485
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
QK Y ++ P++Q L L G S P L + L
Sbjct: 486 QKDLYNHFIKSPDVQSL------------------------LRGKGSQP----LKVIGML 517
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ P D P + K E D V +A+ +VK G
Sbjct: 518 KKLCNHPDLLN-LPEDLPGCEDKLPE----------DFVQKDARGRD----REVKVWYSG 562
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM L++++ A DKI+L S + LDI +GY RLDG+ + RQ LV
Sbjct: 563 KMAVLDRMLARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLV 622
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN S + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 623 DKFNDPESPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 682
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE V+ RQ +KQ LS+ V S + +R+F
Sbjct: 683 FVYRFITTGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
Length = 800
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 294/578 (50%), Gaps = 80/578 (13%)
Query: 122 GEYPIIQVPASINCRLLE----HQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQT 172
GE+P +VP I+ +L + HQ EGVKF+YK + HG I+ D+MGLGKT+Q
Sbjct: 194 GEHP--RVPVVIDPKLAKILRPHQIEGVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQC 251
Query: 173 IAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSI 228
I L + + + T ++ ++ CP+S+++NW E +W +T +I
Sbjct: 252 ITLLWTLLKQSPDAGKTTIQK--------AIVACPASLVRNWANELVKWLGPDATTPFAI 303
Query: 229 YHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
+++ + +L + ++I S+++ R++ L +++ DE HRLK
Sbjct: 304 DGKASKEELTRQLRQWAIATGRAVTRPIIIVSYETLRLNCEELRNTEIGLILCDEGHRLK 363
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N +KL+ A L + R+ L+GT +QN + E ++L + P LGT FR+ ++ P+
Sbjct: 364 NNDNKLFTALNGLNVKRRVILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPIL 423
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
G+ A E + DE L ++ K+++RRT + +L + K ++VVFC ++ Q
Sbjct: 424 RGRDSMASEAERKRGDECLAELATIVNKFVIRRTNDLLSKYLPI-KYEHVVFCNLAPFQL 482
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
Y L P+IQ L L G S P L + L+
Sbjct: 483 DLYNYFLTSPDIQAL------------------------LRGKGSQP----LKAIGILKN 514
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKM 518
+ NH +L+K P D P S PD D V +++ D+K GKM
Sbjct: 515 LCNHPDLLK-LPDDLP---------GSEQHYPD-DYVPRDSRGRD----RDIKPWYSGKM 559
Query: 519 RALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L++++ A DKI+L S + LD+ EK + Y RLDG N RQ LVD
Sbjct: 560 QVLDRMLARIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDK 619
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V
Sbjct: 620 FNDPNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFV 679
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 680 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 717
>gi|405123916|gb|AFR98679.1| DNA dependent ATPase [Cryptococcus neoformans var. grubii H99]
Length = 1066
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 295/595 (49%), Gaps = 52/595 (8%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D E I++P SIN L E+QR G KFLY YK G +LGDDMGLGKT+Q I+FL+A+
Sbjct: 302 DQETKDIKIPTSINRFLREYQRAGAKFLYDAYKQGKGAVLGDDMGLGKTVQVISFLSAIM 361
Query: 181 GK-----DESSDSTILKDNKVDKKG----YVLIICPSSVIQNWEIEFSRWSTFNVSIYHG 231
K D ++++ VD LIICP S+I NW E W F +++
Sbjct: 362 RKTGTYVDHQRRKRTIRESAVDVSPRHWPTALIICPKSLISNWCRELDIWGYFEYAVWKS 421
Query: 232 PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
N + +K ++++I S+D R+ + ++ VIVDEAHRLK S+ +A
Sbjct: 422 DNWRDVQQKFLHGYLDLMIVSYDVARLDIQHIKDLPLSAVIVDEAHRLKEPMSQTTLALK 481
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL--TAPE 349
++ + LTGT++QN+I E++++ D+V G GT ++EF P+K G ++ TA E
Sbjct: 482 SIQCQVCFALTGTLVQNRIDEMWSVLDFVHRGWAGTYRQWKEFAVSPIKKGHQVEGTAAE 541
Query: 350 --RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
R I Q +L + LRR K I H + K+D VVFC ++ Q AYR L+
Sbjct: 542 VVRAIMTIGVMTQR---ILPHFYLRRDK-RLIAHELPEKKDLVVFCPLASRQIVAYRALI 597
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
+ ++ + ++ PC CGS + CC+ ++ +S ++ L L++++NH L
Sbjct: 598 ESDDVVNIQARNRPCPCGSGKRAILCCEGKEH----NSNMKEILFQYLSALRKVANHFGL 653
Query: 468 IKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS 527
+ + D + + +L G + E+ D ++CGK L+KL+
Sbjct: 654 LYDHKDDNRHTRMVNRKLFKICTGHEPTSRSDYTLEEAL----DPENCGKWNLLKKLLIQ 709
Query: 528 WASK--GDKILLFSYSVRMLDILEKFLIR----KGYSFSRLDGSTPSNLRQSLVDDFNSS 581
W ++ +K+L+FS SVR+L I+ +F+ G+ F L G RQ ++D F
Sbjct: 710 WRNEPVKNKVLIFSSSVRLLKIISRFISTSPSLSGFEFDALTGEASGAERQEMIDRFQDL 769
Query: 582 PSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ LISTRAGG+GLNL + ++ RS K ++ F ++
Sbjct: 770 EKDHFIMLISTRAGGVGLNLTA----------------VKGPSRSSSTSVKVFIMFFNVV 813
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF--QGELFGICNLF 693
S + + V KQQ + +G LE R ++G Q ELFG+ NLF
Sbjct: 814 SFPDI--CCFNTTVQKQQSARQLNNGTLEPRIYQGYDRATNVKDQAELFGVHNLF 866
>gi|410081892|ref|XP_003958525.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
gi|372465113|emb|CCF59390.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
Length = 1055
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 281/541 (51%), Gaps = 84/541 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P IN +L +Q +G+ +L L+++ GIL D+MGLGKT+QTI+FL +
Sbjct: 136 PVYINGQLRHYQVQGLNWLISLHRSGLAGILADEMGLGKTLQTISFLGYL---------- 185
Query: 190 ILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEAC 244
++K G L+I P S + NW+ E +RW+ N I G ++I E L +C
Sbjct: 186 ----RYIEKVPGPFLVIAPKSTLNNWKREVNRWTPEINAFILQGDKDERSELIKENLLSC 241
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+V+I S++ + L +++WE +I+DEAHR+KNE+S L E +RNR+ +TGT
Sbjct: 242 NFDVVIASYEIVIREKASLRKIDWEYIIIDEAHRIKNEESLLSQVLREFTSRNRLLITGT 301
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL+ L +++ P + F +++ + E + + L
Sbjct: 302 PLQNNLHELWALLNFLLPDIFSDSQDFDDWF-----------SSESTEKDQGSIVKQLHT 350
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL+ +LLRR K + L+ +E N ++ MS +QK+ YR++L+ KDL
Sbjct: 351 VLQPFLLRRIKNDVETSLLPKQELN-LYVGMSSMQKKWYRKILE---------KDLDAVN 400
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
GS T+ E RL N+ +++L++ NH L D
Sbjct: 401 GSNGTK-ESKTRLLNI--------------VMQLRKCCNHPYLF-------------DGA 432
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+ D LV +A K++ L+KL+ +G ++L+FS R+
Sbjct: 433 EPGPPYTTDEHLVYNSA---------------KLKVLDKLLTKMKMEGSRVLIFSQMSRV 477
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSA 603
LDILE + +GY + R+DGST R +D++N+ SK +FL++TRAGGLG+NL SA
Sbjct: 478 LDILEDYCYFRGYEYCRIDGSTAHEDRIEAMDEYNAPGSSKFIFLLTTRAGGLGINLTSA 537
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K +L +
Sbjct: 538 DIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLV 597
Query: 664 V 664
+
Sbjct: 598 I 598
>gi|302789546|ref|XP_002976541.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
gi|300155579|gb|EFJ22210.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii]
Length = 788
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 309/599 (51%), Gaps = 91/599 (15%)
Query: 116 LVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAF 175
LVL +G + I +P +++ L EHQ EG+++L++L+ + GGILGDDMGLGKT+Q AF
Sbjct: 58 LVLG-EGRWKFI-LPGNVSSILYEHQHEGLRWLWRLHLQRRGGILGDDMGLGKTMQIAAF 115
Query: 176 LAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS---------RWSTFNV 226
L +F +K+ K+ LI+ P ++I +W E + +S ++
Sbjct: 116 LCGLF------------HSKLIKRA--LIVAPKTLIPHWGKELNVVGLGRKVKDYSGTSI 161
Query: 227 SIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSIL--------SEVNWEIVIVDEAHR 278
S+ N D IL+ A GV L+T++D R + + L +V W+ VI+DE H
Sbjct: 162 SVRE-SNLDRILQ---AGGV--LLTTYDIVRHNTNALKGEYNFDDDDVTWDYVILDEGHL 215
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
+KN ++ + E+ + +RI ++GT +QN + E++ LFD+ P LG R+ F+ Y+
Sbjct: 216 IKNPSTQRAKSLKEIPSAHRIIISGTPIQNNLREMWALFDFCYPELLGDRKEFKAKYETM 275
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL------MMGKEDNVVF 392
+ G A +R RI Q L Y LRR K++ + + K D +V+
Sbjct: 276 ILSGNDKNATDRQKRIGAAVAQELQDRFAPYFLRRLKKDVFPNTGEETQQLAKKNDIIVW 335
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
+S Q++ Y L+ Q + + GS L + K++ CD P L
Sbjct: 336 LRLSQRQRQMYTAFLRSETAQGSLA---GSAKGSALAALTILKKI-----CDH-PLLLT- 385
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
K+ D + + D+ A +S GL++
Sbjct: 386 -------------------------KRATDDVVEGLEYLDSTDIAAAEAMRKSLAGLAEP 420
Query: 513 K--------SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
+ SC K+ L L+ + +G + L+F+ +++MLDI+++ + ++ YSF R+DG
Sbjct: 421 EPDSDGNKHSC-KIVFLMALLENLVQEGHRTLVFAQTLKMLDIIQEEITKRRYSFCRIDG 479
Query: 565 STPSNLRQSLVDDFNSSP-SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
T + RQ +V+DF + + +FL++++ GGLGL L +A+RVVI DP WNP++D Q+ D
Sbjct: 480 KTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWNPSKDNQSVD 539
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R++R GQ R VIV+RL+++G+LEE +Y +QV+K L +A + RYF QD +E
Sbjct: 540 RAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVATERAEQFRYFSQ-QDFREL 597
>gi|336262225|ref|XP_003345897.1| hypothetical protein SMAC_06298 [Sordaria macrospora k-hell]
gi|380088968|emb|CCC13080.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1126
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 278/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 176 PAFIQGQMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 225
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ +D G L+I P S + NW+ EF++W+ NV + G + +I ++L
Sbjct: 226 ---RHIMDTTGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIADRLVDEN 282
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 283 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRVFNSRNRLLITGTP 342
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 343 LQNNLHELWALLNFLLPDVFGDSEAFDQWF-----SGQD--------RDQDTVVQQLHRV 389
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 390 LRPFLLRRVKSDVEKSLLPKKEVN-VYIGMSEMQVKWYQKILE---------KDIDAVNG 439
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 440 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 482
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 483 -----------------------------VYNAGKMLVLDKLLKRLQKQGSRVLIFSQMS 513
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R + +D++N S K VFL++TRAGGLG+NL
Sbjct: 514 RLLDILEDYCVFRQYKYCRIDGGTAHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLT 573
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 574 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 633
Query: 662 IAV 664
+ +
Sbjct: 634 LVI 636
>gi|410074857|ref|XP_003955011.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
gi|372461593|emb|CCF55876.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
Length = 1085
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 279/547 (51%), Gaps = 80/547 (14%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +G+ +L L+ + GIL D+MGLGKT+QT+AFL
Sbjct: 115 EFQFRESPAYVNGKLRSYQVQGLNWLVSLHNDGLAGILADEMGLGKTLQTVAFLG-YLKY 173
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMIL 238
E+ D G L+I P S + NW E +RW+ + + G ++MI
Sbjct: 174 IENID------------GPFLVIAPKSTLNNWLREINRWTPEVDAFVLQGDKEERQEMIK 221
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
KL C +++I S++ S + NWE +++DEAHR+KNE+S L E ++NR
Sbjct: 222 TKLLPCDFDIVIASYEIIIREKSAFKKFNWEYIVIDEAHRIKNEESMLSQVLREFTSKNR 281
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P + F E++ G + I
Sbjct: 282 LLITGTPLQNNLHELWALLNFLLPDIFSNSQDFDEWFS---SEGSNNEENQELIV----- 333
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L +L+ +LLRR K + L+ KE N ++ MS +QK+ YR++L+ K
Sbjct: 334 -KQLHTILQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYRQILE---------K 382
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D+ GS + E RL N+ +++L++ NH L
Sbjct: 383 DIDAVNGSNGNK-ESKTRLLNI--------------VMQLRKCCNHPYLF---------- 417
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
D + D LV +A K++ L+KL+ +G ++L+F
Sbjct: 418 ---DGAEPGPPYTTDEHLVYNSA---------------KLKVLDKLLTKMKMEGSRVLIF 459
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S R+LDILE + +GY + R+DGST R +D++N+ S++ +FL++TRAGGLG
Sbjct: 460 SQMSRLLDILEDYCFFRGYQYCRIDGSTDHEDRIRSIDEYNAPDSEKFLFLLTTRAGGLG 519
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ S+EE + R K
Sbjct: 520 INLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKILERATQKL 579
Query: 658 QLSNIAV 664
+L + +
Sbjct: 580 KLDQLVI 586
>gi|365983656|ref|XP_003668661.1| hypothetical protein NDAI_0B03840 [Naumovozyma dairenensis CBS 421]
gi|343767428|emb|CCD23418.1| hypothetical protein NDAI_0B03840 [Naumovozyma dairenensis CBS 421]
Length = 1363
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 296/575 (51%), Gaps = 76/575 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + +F +
Sbjct: 453 VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLFESKKEP------ 506
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PN-RDMILEKLEACGVEVL 249
G L+I P S I NW +EF +W+ + N IY G PN R + ++ +VL
Sbjct: 507 -------GPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRRSLQHEIRNGNFDVL 559
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ ++LS+ +W +I+DE HR+KN +SKL Y +TRNR+ LTGT +QN
Sbjct: 560 LTTYEYIIKDKALLSKHDWAHMIIDEGHRMKNAQSKLSYTISHYYRTRNRLILTGTPLQN 619
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ L ++V P + + F ++++ P + E + L VLR
Sbjct: 620 NLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLVIRRLHKVLRP 679
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+LLRR K+E + + K + V+ C +S LQ++ Y ++L+ + L G+
Sbjct: 680 FLLRRLKKE-VEKDLPDKVEKVIKCKLSGLQQQLYEQMLK--------HNALFVGAGTEG 730
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
K L+N +++L++I NH P DE
Sbjct: 731 ATKTGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VEG 761
Query: 489 VFGPDIDLVGGNAQNESFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
V P G SDV + GK L++++ + + G ++L+F +++D
Sbjct: 762 VVNPS-------------RGNSDVLYRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 808
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL K + RLDGST ++ R ++ +FN+ S+ FL+STRAGGLGLNL +A+
Sbjct: 809 IMEDFLRMKDLKYMRLDGSTKADDRTGMLKEFNAPNSEYFCFLLSTRAGGLGLNLQTADT 868
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 869 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 928
Query: 665 SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDN 699
+GK + + ++ +EF +L + N RD DN
Sbjct: 929 AGKFDNK--STAEEQEEFLRKL--LENEMRDDEDN 959
>gi|237832233|ref|XP_002365414.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
gi|211963078|gb|EEA98273.1| DNA excision repair protein, putative [Toxoplasma gondii ME49]
Length = 1555
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/598 (30%), Positives = 291/598 (48%), Gaps = 102/598 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
++VP I L HQ+ GV++L++L K GGI+GD+MGLGKTIQ +AFLAA+
Sbjct: 667 FLRVPKFIWENLYPHQQTGVRWLWQLLKQGVGGIVGDEMGLGKTIQAVAFLAALH----- 721
Query: 186 SDSTILK-----DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNR------ 234
S +L+ + + YV S + S N + P +
Sbjct: 722 -HSGVLQVRNLAEAPTENGAYVSDDAGSPLT---------LSALNRGVTTTPQKLLDTFI 771
Query: 235 --DMILEKLEACGVE--------------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
D + + E ++ +L+T+++++R+H +L W++ I+DE +
Sbjct: 772 RNDEVADYAEFASIDRLEEAARAAEESNGILLTTYETFRMHLRLLLRYVWKMAILDEGQK 831
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
++N + + +A +L T +R+ L+ T +QN + E ++L D+ APG LGT F E EP
Sbjct: 832 IRNPHAAITLAVKQLPTPHRLILSATPIQNNLQEFWSLLDFAAPGRLGTLPVFLEQIAEP 891
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSD 397
+ G A + A L V +LRR+K+E L + K + V+ C M+
Sbjct: 892 ITMGGYANASRESVEAAYRCACLLRKVALPLILRRSKKEMQEFLRLPNKAEEVLLCNMTA 951
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSC-GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
Q Y L + + + + P SP E + L+ D C L L
Sbjct: 952 EQYALYVDFLAVQKARFSRHHYHPNDAFSSPFEASE-----ETLEKRDRCRMLFTLSVLR 1006
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
K I+NH PD+ LV + E + + + G
Sbjct: 1007 K---IANH---------------------------PDLLLVHNEVRPEDY---GNPERSG 1033
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL--------------------IRKG 556
K+ L +++ W ++G ++LLF+ +V+MLDIL++FL +KG
Sbjct: 1034 KLIVLREVLRVWKAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTLGGKKG 1093
Query: 557 YSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPA 616
+SF RLDG P R ++VD F S L++TR GG+GLNL +A+RVVIFDP+WNP
Sbjct: 1094 FSFLRLDGGVPVASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLTAADRVVIFDPDWNPM 1153
Query: 617 QDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
D+QA++RS+R GQ + V ++RLL++GS+EE VY RQV+K LS + ++++F+
Sbjct: 1154 TDMQARERSWRIGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQDPRQRKFFK 1211
>gi|426235834|ref|XP_004011884.1| PREDICTED: DNA repair and recombination protein RAD54B [Ovis aries]
Length = 909
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 275/538 (51%), Gaps = 50/538 (9%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + ++
Sbjct: 296 LRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGRPVV 355
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S++ NW EF +W + I+ I E ++ VLI
Sbjct: 356 KK--------TLIVTPGSLVNNWRKEFQKWLGIERIKIFTVDQDHKIEEFTKSPFYSVLI 407
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + + ++++I DE HRLKN K A + L RI LTGT +QN +
Sbjct: 408 ISYEMLLRSLDQIKSIKFDLLICDEGHRLKNSTIKATTALISLSCEKRIILTGTPVQNDL 467
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + L D+V PG LG+ +R+ Y+EP+ ++ +A E + ++R L + ++
Sbjct: 468 QEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFI 527
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ-CLINKDLPCSCGSPLT 429
LRRT +E I + K +NVVFC LQ YR+LL ++ CL
Sbjct: 528 LRRT-QEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQG------------ 574
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
L+N L C+ L+++ NH L+ + +++ D ++
Sbjct: 575 ------LLENTSH---------LICIGALKKLCNHPCLLFGSVKEKESNSTWDESEERSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ I++ + F + GK++ L KL+ +K++L S R LDI
Sbjct: 620 YEGLINVFPADYNPTMFTE----EESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQKIVDGFNSKYSPDFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVV 793
>gi|358054278|dbj|GAA99204.1| hypothetical protein E5Q_05897 [Mixia osmundae IAM 14324]
Length = 911
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 295/572 (51%), Gaps = 81/572 (14%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP ++ RL + HQ EGVKFLYK + + G I+ D+MGLGKT+Q I L
Sbjct: 313 KVPVVLDPRLGKVLRPHQVEGVKFLYKAATGMISEGAFGCIMADEMGLGKTLQCITLL-- 370
Query: 179 VFGKDESSDSTILKDNKVDKKGYV---LIICPSSVIQNWEIEFSRW---STFNVSIYHG- 231
T+LK + KG + +++CP+S+++NW EF +W T N G
Sbjct: 371 ---------FTLLKQSPKAGKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAIDGS 421
Query: 232 -PNRDMIL---EKLEACGVE----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEK 283
P D++ + + A G V+I S+++ R + L +++ DEAHRLKN
Sbjct: 422 MPKPDLMAALRQWVSAHGRAICQPVIIVSYETLRSLTAELGNAPIGLILCDEAHRLKNAT 481
Query: 284 SKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQ 343
+ Y ++ + R+ LTGT +QN + E ++L ++ PG LG R F++ Y+ + G+
Sbjct: 482 NLTYTELDKINVQRRVLLTGTPVQNDLTEYFSLLNFAIPGKLGARADFKKNYELAIVRGR 541
Query: 344 RLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY 403
A ++ E+ + L +++ ++++RRT + +L + K ++VVFC +S LQ + Y
Sbjct: 542 MSEATDKERERCQEKLKELTSLVNQFVIRRTNDLLTKYLPV-KYEHVVFCNLSPLQLQLY 600
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
++L++ PE KD + L + + Q++ N
Sbjct: 601 QKLIKRPE-----EKDAKGGTSA-------------------------LGAIQRAQKLCN 630
Query: 464 HLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
H +L+ RD D + D F + S + K+ R LEK
Sbjct: 631 HPQLLDAYFRDNFDDFKNDMPDGFDPFD----------RRRSVVSEYSGKTLVLDRFLEK 680
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ A DKI+L S LD+ EK L + Y + RL+GST RQ LVD+FN+
Sbjct: 681 MR---AETNDKIVLISNYTETLDVFEKMLRDRKYGYFRLEGSTSIKKRQKLVDEFNNPEG 737
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
K+ VFL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 738 KEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 797
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
G++EE ++ RQ +KQ LS+ V K + +R+F
Sbjct: 798 GTIEEKIFQRQAHKQALSSCVVDAKEDAERHF 829
>gi|403216395|emb|CCK70892.1| hypothetical protein KNAG_0F02250 [Kazachstania naganishii CBS
8797]
Length = 1150
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 280/540 (51%), Gaps = 84/540 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P +N L +Q +G+ +L L+K GIL D+MGLGKT+QTI+FL +
Sbjct: 134 PKFVNGELRPYQIQGLNWLISLHKTGLSGILADEMGLGKTLQTISFLGYL---------- 183
Query: 190 ILKDNKVDKK-GYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEAC 244
V+K G L+I P S + NW E +RW+ N + G + ++ +++ AC
Sbjct: 184 ----RYVEKICGPFLVIAPKSTLNNWLREINRWTPEVNALVLQGDKEERAALLRDRILAC 239
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+V++TS++ S + +++WE +I+DEAHR+KNE+S L E +RNR+ +TGT
Sbjct: 240 DFDVVVTSYELIIKEKSYMKKIDWEYIIIDEAHRIKNEESMLSQVIREFTSRNRLLITGT 299
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL+ L +++ P + F ++ + E+ ++ L
Sbjct: 300 PLQNNLHELWALLNFLLPDIFSNSQDFDAWFSSEASEENK----EKIVK-------QLHT 348
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL+ +LLRR K E L+ +E N ++ MS +Q++ Y+++L+ KD+
Sbjct: 349 VLQPFLLRRIKSEVETSLLPKQEMN-LYVGMSSMQRKWYKQILE---------KDIDAVN 398
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
GS + E RL N+ +++L++ NH L D
Sbjct: 399 GSNGNK-ESKTRLLNI--------------VMQLRKCCNHPYLF-------------DGA 430
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+ D LV +A K++ L++L+ W ++G ++L+FS R+
Sbjct: 431 EPGPPYTTDEHLVFNSA---------------KLKVLDRLLAKWKAEGSRVLIFSQMSRL 475
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
LDILE + + YS+ R+DGST R +D++N+ S++ +FL++TRAGGLG+NL SA
Sbjct: 476 LDILEDYCFLRSYSYCRIDGSTDHEDRIRSIDEYNAPDSEKFIFLLTTRAGGLGINLTSA 535
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VV+FD +WNP DLQA DR+ R GQK+ V VFR ++ S+E+ + R K + +I
Sbjct: 536 DIVVLFDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDVSVEDKILERATQKLETGSIG 595
>gi|150864381|ref|XP_001383167.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
gi|149385637|gb|ABN65138.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
Length = 1222
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 317/624 (50%), Gaps = 105/624 (16%)
Query: 50 QQLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDH 109
++++ + +F LP++N + R + EK +E+ E Q++E HQ + DH
Sbjct: 230 KRIREVDSKMDFQLPKKNAKINRRRRKTEK-----EEDAELLQDEE----HQDDE---DH 277
Query: 110 TGPFEPLVLSKDGEYPIIQVPASIN-CRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGK 168
I + P+ + +L E+Q +G+ +L L++N+ GIL D+MGLGK
Sbjct: 278 QTTV------------ITESPSFVKEGKLREYQVQGLNWLISLFENRLSGILADEMGLGK 325
Query: 169 TIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVS 227
T+QTI+FL + +K K+D G ++I P S + NW EF++W+ NV
Sbjct: 326 TLQTISFLGYL---------RYIK--KID--GPFIVIVPKSTLDNWRREFAKWTPDVNVV 372
Query: 228 IYHG---PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKS 284
+ G ++I KL +VLITSF+ S L + WE ++VDEAHR+KNE S
Sbjct: 373 VLQGTKDARHEIIQNKLLTADFDVLITSFEMVIREKSHLKKFRWEYIVVDEAHRIKNEDS 432
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
L ++NR+ +TGT +QN + EL+ L +++ P G E F E+++ + G+
Sbjct: 433 SLSQIIRVFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFEN--QGGED 490
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
+ R + D+ Q L +L +LLRR K + L+ E N V+ M+++Q + Y+
Sbjct: 491 VDEDTR-QKNQDKVVQQLHQLLSPFLLRRVKADVETSLLPKIETN-VYIGMTEMQIQWYK 548
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
+LL+ KD+ G + + E RL N+ +++L++ NH
Sbjct: 549 KLLE---------KDIDAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNH 584
Query: 465 LELI---KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRAL 521
L +P P D+ VF + GKM L
Sbjct: 585 PYLFDGAEPGPPYTNDEH--------LVF-----------------------NSGKMVIL 613
Query: 522 EKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+K++ + S+G ++L+FS R+LDILE + + YS+ R+DGST R +D +N
Sbjct: 614 DKMLQKFKSEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGSTSHEDRIEAIDQYNDP 673
Query: 582 PS-KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
S K +FL++TRAGGLG+NL SA+ V+++D +WNP DLQA DR+ R GQK+ V V+R +
Sbjct: 674 ESDKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFV 733
Query: 641 SAGSLEELVYTRQVYKQQLSNIAV 664
+ ++EE V R K +L + +
Sbjct: 734 TENAIEEKVLDRAAQKLRLDQLVI 757
>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis
UAMH 10762]
Length = 813
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/590 (32%), Positives = 293/590 (49%), Gaps = 102/590 (17%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
D E P +VP I+ R+ + HQ EGVKFLY+ + N G I+ D+MGLGKT+Q
Sbjct: 203 DSERP--KVPVVIDPRIAKVLRPHQVEGVKFLYRCTTGLIDDNAQGCIMADEMGLGKTLQ 260
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYV---LIICPSSVIQNWEIEFSRW---STFN 225
I + T+LK + KG + +I CPSS+++NW E +W N
Sbjct: 261 CITLMW-----------TLLKQSPDAGKGTIQKCVIACPSSLVRNWANELVKWLGQDAIN 309
Query: 226 VSIYHGPN---------RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
G R A VLI S+++ R++ L +++ DE
Sbjct: 310 PFAVDGKASKEELTMQMRQWAAATGRAVIRPVLIVSYETLRLYVQELGNTPIGLMLCDEG 369
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKN +S+ + A L + R+ L+GT +QN + E + L ++ PG LGTR+ FR+ Y+
Sbjct: 370 HRLKNGESQTFEALNALNVKKRVILSGTPIQNDLSEYFALLNFANPGYLGTRQDFRKQYE 429
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
P+ G+ A + ++ +ER L+ + K+++RRT + +L + K ++VVFC ++
Sbjct: 430 IPILRGRDAGASDHDMQRGNERLSELLVKVNKFIIRRTNDILSKYLPV-KYEHVVFCNLA 488
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL----------DNLDGCDSC 446
Q Y ++ PEIQ L+ PL + K+L D+L GCD
Sbjct: 489 PFQLDLYNYFVKSPEIQSLLRG----KGSQPLKAIGLLKKLCNHPDLLNLPDDLPGCD-- 542
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
EL P + D + ++ E+ N S+
Sbjct: 543 -------------------ELF-PKEYETKDNRGRNREV-----------------NPSY 565
Query: 507 IGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
GKM+ L++++ S + DKI+L S + LD+ E+ Y RLDG+
Sbjct: 566 --------SGKMQVLDRMLRSIRHETTDKIVLISNYTQTLDVFERLCRSNSYGCLRLDGT 617
Query: 566 TPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+ RQ LVD FN K+ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R
Sbjct: 618 MNVSKRQKLVDKFNDPEGKEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALAR 677
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+R GQK+ V+R ++ G++EE V+ RQ +KQ LS+ V S + +R+F
Sbjct: 678 VWRDGQKKDCFVYRFIATGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHF 727
>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
impatiens]
Length = 820
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 265/532 (49%), Gaps = 67/532 (12%)
Query: 140 HQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQR G+ FLY+ N G IL D+MGLGKT+Q I + + K ILK
Sbjct: 234 HQRHGIVFLYECIMGLKVSNHFGAILADEMGLGKTLQCITIIWTLLKKGPYG-YPILK-- 290
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVEVLITSF 253
Y+LI+ PS + NW EF +W F+ +S Y ++ + + V+I S+
Sbjct: 291 ------YILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNAKNKAKDFKKHIRNSVMIISY 344
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
D + E+ + ++I DE HRLKN K LK + +I LTGT +QN + E
Sbjct: 345 DLLTRCEQEVKEIPFNLIICDEGHRLKNNDIKAAKILYNLKCKRKILLTGTPIQNNLQEF 404
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ L D+V P LG+ F+ +Y++P+ Q TAP+ + + ER L + ++LRR
Sbjct: 405 FTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHVVSLGTERANELREKTKCFILRR 464
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
T +ETI + K + +VFC +S Q+ Y ++ + L + ++P
Sbjct: 465 T-QETINKYLPSKHELIVFCRLSIEQQDLYSQVTDSWFNKSLSDNNIPH----------- 512
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
L + L++I NH EL +
Sbjct: 513 ------------------LTVITALKKICNHPELF---------------------YNEK 533
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI 553
+L +++ + + CGK+ ++ L+ + +K++L SY + LDILE
Sbjct: 534 TELFCIDSKTSNIKDSTKTVYCGKISIVQTLLRNLKKTEEKLVLVSYYTQTLDILETVCN 593
Query: 554 RKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRVVIFDPN 612
++G F RLDGST SN R +++ FNS+ K +VFL+S +AGG+GLNL A+R+++FD +
Sbjct: 594 KEGLQFLRLDGSTTSNTRSKIIERFNSTSDKSKVFLLSAKAGGVGLNLPGASRLILFDSD 653
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
WNPA D QA R +R GQK+ V + RLL+ G++EE ++ RQ+ K L+ V
Sbjct: 654 WNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVV 705
>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
Length = 974
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 273/536 (50%), Gaps = 62/536 (11%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 316 LREHQREGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 370
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLEACGVEVL 249
+ V KK LI+CP ++I NW EF +W V ++ R + + V+
Sbjct: 371 EAQPVVKKA--LIVCPVTLIDNWRKEFRKWLGNERVGVFVADAKRTRLTDFTMGKSYSVM 428
Query: 250 ITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R LS+ +IVI DE HR++ ++K A L T RI L+GT +QN
Sbjct: 429 IIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQN 488
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ E + + D+V PG LGT + F + ++ P+ ++ A E+ I + R + L +
Sbjct: 489 DLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLTSL 548
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + + +L K + V+FC + QK Y +L P QC
Sbjct: 549 FILRRTADILLKYL-PPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCA------------- 594
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
L +S L + L+++ N L+KP D+ A ++S
Sbjct: 595 -----------LGNSESA-----LQLITILKKLCNSPSLLKPRNSDQTPNSTLGALISS- 637
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDI 547
P + LS S GK+R L++L+++ + +K++L S LD+
Sbjct: 638 -LPPTV-----------LRHLSPA-SSGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDL 684
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGLNLVSANR 605
L FL F RLDGSTP + RQ LVDDFN S S V FL+S +AGG GLNL+ A+R
Sbjct: 685 LATFLTSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASR 744
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+++FD +WNPA D+QA R R GQKRH V+RL+ G+LEE ++ RQV K L++
Sbjct: 745 LILFDVDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLAD 800
>gi|300794189|ref|NP_001179884.1| DNA repair and recombination protein RAD54B [Bos taurus]
gi|296480441|tpg|DAA22556.1| TPA: RAD54 homolog B [Bos taurus]
Length = 909
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 276/537 (51%), Gaps = 48/537 (8%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + I+
Sbjct: 296 LRPHQKEGITFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIV 355
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S++ NW+ EF +W + I+ + E ++ VLI
Sbjct: 356 KK--------TLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDHKVEEFTKSPFYSVLI 407
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + V ++++I DE HRLKN K A + L RI LTGT +QN +
Sbjct: 408 ISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSTIKTTTALISLSCEKRIILTGTPVQNDL 467
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + L D+V PG LG+ +R+ Y+EP+ ++ +A E + ++R L + ++
Sbjct: 468 QEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFI 527
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K +NVVFC LQ YR+LL ++ + L + S L
Sbjct: 528 LRRT-QEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQGLLENT--SHLIC 584
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
+ K+L N PCL + ++ + N + ++R E VF
Sbjct: 585 IGALKKLCN------------HPCL-----LFGSIKEKESNSTWDESEERNLYEGLMNVF 627
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDIL 548
D + + + + GK++ L KL+ +K++L S R LDIL
Sbjct: 628 PADYNPI-----------MFTEEESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDIL 676
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + ++
Sbjct: 677 QEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLI 736
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 737 LYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVV 793
>gi|452841230|gb|EME43167.1| hypothetical protein DOTSEDRAFT_72522 [Dothistroma septosporum NZE10]
Length = 1419
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 289/559 (51%), Gaps = 84/559 (15%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
+ Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 535 VAQASNLVGGTLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKR- 593
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLE 242
+ G L+I P S + NW EF RW+ + N +Y GP R +++
Sbjct: 594 ------------QHGPYLVIVPLSTLTNWNSEFERWAPSVNRIVYKGPPAQRKNHQQQIR 641
Query: 243 ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGL 301
+VL+T+++ +LS+V W +I+DE HR+KN +SKL + TR R+ L
Sbjct: 642 YGNFQVLLTTYEFIIKDRPVLSKVRWLHMIIDEGHRMKNAQSKLSNTISQYYHTRYRLIL 701
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIAD 356
TGT +QN + EL+++ ++V P + + F E+++ P + GQ LT E+ + I
Sbjct: 702 TGTPLQNNLTELWSMLNFVLPNIFKSAKSFDEWFNTPFANTGGQDKMELTEEEQLLVI-- 759
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ L VLR +LLRR K++ + + K++ V+ C++S LQ + Y++L+Q I +
Sbjct: 760 ---RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCSLSALQAKLYKQLMQHNRIDVV- 814
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL--VLPCLVKLQQISNHLELIKPNPRD 474
G D L + L++L+++ NH
Sbjct: 815 -------------------------GADGKKTGLRGLSNMLMQLRKLCNH---------- 839
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
VF D + N I ++ GK L++++ + + G +
Sbjct: 840 ------------PFVFEEVEDQMNPNRLTNDLIW----RTAGKFELLDRVLPKFEATGHR 883
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRA 593
+L+F ++++I+E FL +G + RLDGST ++ R L+ FN+ S+ Q+FL+STRA
Sbjct: 884 VLMFFQMTQIMNIMEDFLRYRGTKYLRLDGSTKADDRSELLRLFNAPGSEYQIFLLSTRA 943
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLGLNL +A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R
Sbjct: 944 GGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERA 1003
Query: 654 VYKQQLSNIAV-SGKLEKR 671
YK + + +GK + +
Sbjct: 1004 QYKLDMDGKVIQAGKFDNK 1022
>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
Length = 764
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 280/548 (51%), Gaps = 71/548 (12%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKF+Y N +G I+ D+MGLGKT+Q I L + + TI
Sbjct: 134 LRPHQREGVKFMYDCVTGAQIDNAYGCIMADEMGLGKTLQCITLLWTLLRQGPDCKPTIC 193
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K +I+CPSS+++NW E +W N G ++ I KL+
Sbjct: 194 K---------AIIVCPSSLVKNWYNEIGKWLGQRINALPMDGGSKAEITLKLQQFMNTFA 244
Query: 244 ---CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
VLI S++++RI+ +IL +V+ DE HRLKN +++ Y A + LK + RI
Sbjct: 245 AIRVATPVLIISYETFRIYSNILHASEVGLVLCDEGHRLKNSENQTYQALMGLKAKRRIL 304
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
++GT +QN + E ++L +V G LGT + F++ Y+ P+ GQ A + + A E Q
Sbjct: 305 ISGTPIQNDLTEYFSLVHFVNSGILGTAQDFKKRYENPILKGQDALATPQERQKAQECLQ 364
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L +++ K ++RRT +L + K + V+ M+ LQ + YR + I+
Sbjct: 365 TLTSIVNKCMIRRTSSLLTKYLPV-KFEQVICVKMTPLQTQLYRNFINSDAIK------- 416
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
+ G L + L+++ NH +L+ DK
Sbjct: 417 -----------------NKFAGTGDKNTLSALSSITMLKKLCNHPDLVY-------DKIM 452
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSWASKG-DKILL 537
+ +E F DL+ N + DV+ GK+ L+ ++ + + DKI+L
Sbjct: 453 ERSE----GFEKGKDLLPSN------YDIKDVRPEYSGKLMILDCILANLKTNTDDKIVL 502
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK ++ Y + RLDGS R +V+ FNS SK+ +F++S++AGG
Sbjct: 503 VSNYTQTLDLFEKLCRKRCYQYVRLDGSMTIKKRAKVVESFNSKESKEWIFMLSSKAGGC 562
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ ++RLL+ G++EE ++ RQ +K
Sbjct: 563 GLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQRQAHK 622
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 623 KALSDTVV 630
>gi|334185464|ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
gi|332642688|gb|AEE76209.1| Rad54-like protein [Arabidopsis thaliana]
Length = 908
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 288/577 (49%), Gaps = 74/577 (12%)
Query: 113 FEPLVL---SKDG--EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG------ILG 161
EPLVL +DG I V + + L HQREGV+F++ HG IL
Sbjct: 151 IEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILA 210
Query: 162 DDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW 221
DDMGLGKT+Q+I L + + + K +I+ P+S++ NWE E +W
Sbjct: 211 DDMGLGKTLQSITLLYTLLCQGFDGTPMVKK---------AIIVTPTSLVSNWEAEIKKW 261
Query: 222 STFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEIVIV 273
+ + RD +L +++ ++VLI S++++R+H S + + +++I
Sbjct: 262 VGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLIC 321
Query: 274 DEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFRE 333
DEAHRLKN+++ A L + R+ L+GT MQN + E + + ++ PGSLG HFR
Sbjct: 322 DEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRH 381
Query: 334 FYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFC 393
+Y+ P+ G+ TA E +A +R L + + +++LRRT HL K VV C
Sbjct: 382 YYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHL-PPKIIEVVCC 440
Query: 394 TMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLP 453
M+ LQ Y L + + L D+ VL
Sbjct: 441 KMTTLQT-TYNGCLCMQLKRAL---------------------------ADNAKQTKVLA 472
Query: 454 CLVKLQQISNHLELI-----KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG 508
+ L+++ NH +LI NP + + A G GG+ +++
Sbjct: 473 YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDG---AWVE 529
Query: 509 LSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTP 567
LS GKM L +L+ + K D+I+L S + LD+ + + Y F RLDGST
Sbjct: 530 LS-----GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTT 584
Query: 568 SNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
+ RQ LV+ N P+K FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R
Sbjct: 585 ISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARV 643
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
+R GQK+ V V+R LS G++EE VY RQ+ K+ L +
Sbjct: 644 WRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKV 680
>gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 959
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 316/651 (48%), Gaps = 83/651 (12%)
Query: 29 SQESSNDTLIIPRRPPKSSLAQQLQRLGET--YNFSLPQQNPETRREKAPVEKSNVFDDE 86
S E++ D + P +P SLA+ GE N + P+ K P++ S V
Sbjct: 200 SNENAGDPVHFPLKP--KSLARTETTKGEKRLLNIAAPRSFAAKNVFKNPLKDSTVL--- 254
Query: 87 EKEKEQEQEKFGRHQLGQFQFDHTGPF-----EPLVLSKDGEYPIIQVPASINCRLLEHQ 141
++ + RH D T P P + K + + + + L EHQ
Sbjct: 255 --VQKPDSSPIPRH-------DPTAPGAVIMKRPTSVPKGKQIVDVVLDPLLAKHLREHQ 305
Query: 142 REGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
REGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I + V
Sbjct: 306 REGVKFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IYEAQPV 360
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLEACGVEVLITSFD 254
KK LI+CP ++I NW EF +W V ++ R + + V+I ++
Sbjct: 361 VKKA--LIVCPVTLIDNWRKEFRKWLGNERVGVFVADTKRTRLTDFTMGKSYSVMIIGYE 418
Query: 255 SYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
R LS+ +IVI DE HR++ ++K A L T RI L+GT +QN + E
Sbjct: 419 RLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQNDLTEF 478
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ + D+V PG LGT + F + ++ P+ ++ A E+ I + R + L + ++LRR
Sbjct: 479 FAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELSNLTSLFILRR 538
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
T + + +L K + V+ C + QK Y +L P QC + + S L +
Sbjct: 539 TADILLKYLP-PKTEYVLLCNPTSSQKNIYHHVLSSPIFQCALG-----NSESALQLITI 592
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
K+L C+S P L+K PR+ Q ++ L + +
Sbjct: 593 LKKL-----CNS-------PSLLK--------------PRNS--DQTPNSTLGALI---- 620
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFL 552
++ + + S GK+R L++L+++ + +K++L S LD+L FL
Sbjct: 621 ------SSLPPTVLRYLSPASSGKIRVLDQLLHNIRHTTSEKVVLISNYTSTLDLLATFL 674
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF--LISTRAGGLGLNLVSANRVVIFD 610
F RLDGSTP + RQ LVDDFN S S VF L+S +AGG GLNL+ A+R+++FD
Sbjct: 675 TSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGLNLIGASRLILFD 734
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+WNPA D+QA R R GQKRH V+RL+ G+LEE ++ RQV K L++
Sbjct: 735 VDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALEEKIWQRQVTKIGLAD 785
>gi|357162876|ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 213/753 (28%), Positives = 360/753 (47%), Gaps = 114/753 (15%)
Query: 86 EEKE-KEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREG 144
EEKE ++ + + G + F+ + TG V++K ++P I L HQREG
Sbjct: 245 EEKENRDTDADDIGWEKTEDFKMEPTGSG---VMAKP-----YKLPGRIFKMLYPHQREG 296
Query: 145 VKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLI 204
+++L+ L+ GGILGDDMGLGKT+Q AFLA +F S +++ VL+
Sbjct: 297 LRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLF------HSRLIR--------RVLV 342
Query: 205 ICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRDMILEKLE-ACGVE-VLITSFDSYR---- 257
+ P +++ +W E S + Y GP+ ++ +L+ A V +L+T++D R
Sbjct: 343 VAPKTLLTHWMKELSVVGLKEKIRDYSGPSVNIRNSELQYAFRVGGILLTTYDIVRNNYK 402
Query: 258 -IHGSILSEVN-------WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+ G ++ + W+ VI+DE H +KN K++ + L++ +RI ++GT +QN
Sbjct: 403 LMRGDFYNDADDEEEGRLWDYVILDEGHIIKNPKTQRAQSLLQIPCVHRIVISGTPIQNN 462
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E++ LF + P LG ++ F+ Y+ P+ G +A R I + L ++ Y
Sbjct: 463 LKEMWALFFFCCPEILGDKDEFKTRYELPILRGNDKSATNREKHIGSNVAKELRERIKPY 522
Query: 370 LLRRTKEETIGHLMMGKEDN---------VVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
LRR K E L G D+ +++ ++ Q++ Y + +N +L
Sbjct: 523 FLRRMKSEVF--LDTGSTDDKKLSKKNELIIWLKLTACQRQLY---------EAFLNSEL 571
Query: 421 PCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
S GSPL + K++ CD P ++ + LE +
Sbjct: 572 VHSSMQGSPLAAITILKKI-----CDH-------PLILTKRAAEGILEGM---------- 609
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK-------SCGKMRALEKLMYSWASK 531
E + +I +V A+N + + D SC K+ + L+ +
Sbjct: 610 -----EGMDGLNNQEIGMVEKMAKNLADMAHDDDALQVDQEVSC-KLSFIMSLLRKLLEE 663
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
G +L+FS + +ML+++++ ++ +GY F R+DG+T + R+ +V DF P Q+FL++T
Sbjct: 664 GHHVLIFSQTRKMLNLIQEAILLEGYKFLRIDGTTKISERERIVKDFQEGPGAQIFLLTT 723
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+ GGLGL L A RV++ DP WNP+ D Q+ DR++R GQ + VIV+RL+++G++EE +Y
Sbjct: 724 QVGGLGLTLTKAARVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSGTIEEKIYK 783
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEE 711
QV+K L A K + RYF ++ Q ELF + D+S L ++ E HE+
Sbjct: 784 LQVFKGALFRTATEQKEQTRYFSK----RDIQ-ELFSLPEQGFDVS--LTQKQLQEEHEQ 836
Query: 712 QGQQQE--RHHC---TNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLE 766
Q E R H QG G+ H + L + + S+ E P +
Sbjct: 837 QLVMDESLREHILFLEQQGIAGVSHH-------SLLFTKAAILPTLSENEALDNKPPTMP 889
Query: 767 DMGIVYAHRNDDIVNKQPGFQRKKEESIPQDLS 799
MG Y + D V K +E P+ S
Sbjct: 890 MMGRQYKASSSDYVANGAAHAFKPKEFTPRTYS 922
>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
vitripennis]
Length = 898
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 281/582 (48%), Gaps = 79/582 (13%)
Query: 103 GQFQFDHTGPFEPLVL------------SKDGEYPIIQVPASINCRLLEHQREGVKFLYK 150
G F+ +EPL++ + D + + V + L HQREG+ FLYK
Sbjct: 266 GSLHFN----YEPLIMPHPPLDVEWCEGNDDKKIHEVSVDGCLASVLRPHQREGIVFLYK 321
Query: 151 LY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLII 205
+ G IL D+MGLGKT+Q I+ + + K S + + VLI+
Sbjct: 322 CIMGMNSAHHKGAILADEMGLGKTLQCISLIWTLLKKGPSGKPVLKR---------VLIV 372
Query: 206 CPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILS 264
PSS+ NW EF RW T ++ Y + + + + V+I ++ + + ++
Sbjct: 373 SPSSLCGNWNKEFKRWLGTMKIAPYVVEGKQKVKDFTKTPRACVMIIGYEMFVRNIDDIN 432
Query: 265 EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS 324
+N++++I DE HRLKN + K +L+ + RI +TGT +QN + E YNL ++V PG
Sbjct: 433 NLNFDLLICDEGHRLKNSEVKTLKFLSQLRCKRRILVTGTPVQNDLTEFYNLANFVNPGV 492
Query: 325 LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM 384
GT ++ +Y+ + QR TA E + + ER + L + ++LRRT I +
Sbjct: 493 FGTPGDYKSYYEHKIVASQRATADEDEVALGQERAKELYEKSKSFILRRT-NTLINKYLP 551
Query: 385 GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCD 444
K + VVFC + Q Y + + LI+ ++ PLT + K++ N
Sbjct: 552 QKHELVVFCKPTVEQNNLYSLITDYWFNRSLIDGNV-----IPLTVITALKKVCNH---- 602
Query: 445 SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNE 504
P+ + SN L+ + P+ N
Sbjct: 603 --PYLFT-------SEKSNILDEVLPSV----------------------------PTNL 625
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
S I S S K++ ++ + + +K++L SY + LD LEK +G F RLDG
Sbjct: 626 SAINTSYSYS-SKVKVVQAIFQAIKRTNEKVVLVSYFTQTLDFLEKVCCTEGLQFCRLDG 684
Query: 565 STPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
TP+ R LVD FNS + FL+S +AGG+GLNLV A+R+++FD +WNPA D QA R
Sbjct: 685 HTPAASRTKLVDRFNSKDNSFFFLLSAKAGGVGLNLVGASRLILFDSDWNPANDAQAMAR 744
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
+R GQKR V ++RLL+ G++EE +Y RQ+ K LS V
Sbjct: 745 IWRDGQKRSVFIYRLLTTGTIEEKIYQRQISKTGLSEAVVDA 786
>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1000
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 269/540 (49%), Gaps = 70/540 (12%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGV+FLY+ N G IL D+MGLGKT+QTIA + T+L
Sbjct: 331 LREHQREGVRFLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIW-----------TLL 379
Query: 192 KDNKVDKKGYV----LIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLEACG 245
K N + + V LI+CP ++I NW+ EF +W + ++ R + +
Sbjct: 380 KQNPIYEAPPVIKKALIVCPVTLIDNWKKEFRKWLGNERIGVFVADAKRTRLTDFTMGQS 439
Query: 246 VEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
V+I ++ R LS+ +IVI DE HR++ ++K A L T R+ L+GT
Sbjct: 440 YSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQTLNTSKRVILSGT 499
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E + + D+V PG LGT + F + ++ P+ Q+ A +R I R + L +
Sbjct: 500 PIQNDLTEFFAMVDFVNPGILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARSEELAS 559
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
+ ++LRRT + + + + K + V+FC + Q YR +L P QC
Sbjct: 560 LTSLFILRRT-ADLLSNYLPPKTEYVLFCNPTSSQANIYRHVLSSPVFQCA--------- 609
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
L DS L + L+++ N L+ P DE +
Sbjct: 610 ---------------LGNSDSA-----LQLITILKKLCNSPSLLNPKSSDEDSTSTLSSL 649
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVR 543
+AS S S GK+R L++L+++ + +K++L S
Sbjct: 650 VASL--------------PSSITRRLTPASSGKIRVLDQLLHNIRHTTSEKVVLISNYTS 695
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF--LISTRAGGLGLNLV 601
LD+L K L F RLDGSTP+ RQ+LVDDFN S VF L+S +AGG GLNL+
Sbjct: 696 TLDLLGKLLTSLSLPFLRLDGSTPAAKRQALVDDFNRSSPTSVFAFLLSAKAGGTGLNLI 755
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R+V+FD +WNPA D+QA R R GQKRH ++R L G+LEE ++ RQV K L++
Sbjct: 756 GASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRFLLKGALEEKIWQRQVTKIGLAD 815
>gi|68479793|ref|XP_716066.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
Length = 1056
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 279/537 (51%), Gaps = 80/537 (14%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + +K
Sbjct: 138 KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL---------RYIK--H 186
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLIT 251
+D G ++I P S + NW EF++W+ NV + G +I ++L +VLIT
Sbjct: 187 ID--GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLIT 244
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
SF+ S L + WE ++VDEAHR+KNE S L +RNR+ +TGT +QN +
Sbjct: 245 SFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLH 304
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLL 371
EL+ L +++ P G + F E +D ++ + L E+ R D+ L +L +LL
Sbjct: 305 ELWALLNFLLPDVFGDSDQFDEAFDN--QNSEELDEEEK-QRRQDKAVSELHQLLSPFLL 361
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K + L+ E N V+ M+D+Q Y+RLL+ KD+ G + +
Sbjct: 362 RRVKADVEKSLLPKIETN-VYIGMTDMQVEWYKRLLE---------KDIDAVNGV-VGKR 410
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELASA 488
E RL L +++L++ NH L +P P D+
Sbjct: 411 EGKTRL--------------LNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHL-------- 448
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
V + GKM L+K++ + ++G ++L+FS R+LDIL
Sbjct: 449 -----------------------VYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDIL 485
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
E + + Y + R+DGST R +D++N+ S++ +FL++TRAGGLG+NL SA+ V+
Sbjct: 486 EDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVI 545
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V R K +L + +
Sbjct: 546 LYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVI 602
>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
Length = 824
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 212/683 (31%), Positives = 337/683 (49%), Gaps = 94/683 (13%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ SV + N T P RPP + +Q G + + P +P + A V
Sbjct: 105 FRKAFSVPLINKNTTAYNPNRPPPTLGLRQ----GAVF-VAKPLHDPCD--DLAIVLYDP 157
Query: 82 VFDDEEKEKEQEQEKFGRHQLG-QFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCRLL 138
DD+ KE + +EK ++ H E L + K +GE+P +VP I+ RL
Sbjct: 158 TVDDKPKEPKAIEEKQKEPEVKVDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDPRLA 215
Query: 139 E----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDS 188
+ HQ EGV+F+Y+ + + +G I+ D+MGLGKT+Q I L + + ++ S
Sbjct: 216 KVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKS 275
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLEAC 244
TI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 276 TIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQW 326
Query: 245 GVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 327 AIASGRSVTRPVIIVSYETLRLNADELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVS 386
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E + L + P LGTR FR+ ++ P+ G+ A E + D
Sbjct: 387 RRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGD 446
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
E L+AV+ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ L
Sbjct: 447 ECLAELLAVVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFVASPDIQAL- 504
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G S P L + L+++ NH P
Sbjct: 505 -----------------------LRGKGSQP----LKAINMLKKLCNH-----------P 526
Query: 477 DKQRKDAELASA-VFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKG 532
D A+L + PD D V A+ DVK GKM+ L++++ A
Sbjct: 527 DLLDLSADLPGCEQYWPD-DYVPKEARGRD----RDVKPWYSGKMQVLDRMLARIRADTN 581
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIST 591
DKI+L S + LD+ E+ + Y RLDG+ N RQ LVD FN ++ VFL+S+
Sbjct: 582 DKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGEEFVFLLSS 641
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++
Sbjct: 642 KAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQ 701
Query: 652 RQVYKQQLSNIAV-SGKLEKRYF 673
RQ +KQ LS+ V S + +R+F
Sbjct: 702 RQSHKQSLSSCVVDSAEDVERHF 724
>gi|238881028|gb|EEQ44666.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1056
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 279/537 (51%), Gaps = 80/537 (14%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + +K
Sbjct: 138 KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL---------RYIK--H 186
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLIT 251
+D G ++I P S + NW EF++W+ NV + G +I ++L +VLIT
Sbjct: 187 ID--GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTAKFDVLIT 244
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
SF+ S L + WE ++VDEAHR+KNE S L +RNR+ +TGT +QN +
Sbjct: 245 SFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLH 304
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLL 371
EL+ L +++ P G + F E +D ++ + L E+ R D+ L +L +LL
Sbjct: 305 ELWALLNFLLPDVFGDSDQFDEAFDN--QNSEELDEEEK-QRRQDKAVSELHQLLSPFLL 361
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K + L+ E N V+ M+D+Q Y+RLL+ KD+ G + +
Sbjct: 362 RRVKADVEKSLLPKIETN-VYIGMTDMQVEWYKRLLE---------KDIDAVNGV-VGKR 410
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELASA 488
E RL L +++L++ NH L +P P D+
Sbjct: 411 EGKTRL--------------LNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHL-------- 448
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
V + GKM L+K++ + ++G ++L+FS R+LDIL
Sbjct: 449 -----------------------VYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDIL 485
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
E + + Y + R+DGST R +D++N+ S++ +FL++TRAGGLG+NL SA+ V+
Sbjct: 486 EDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVI 545
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V R K +L + +
Sbjct: 546 LYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVI 602
>gi|388853645|emb|CCF52817.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Ustilago hordei]
Length = 1113
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 271/533 (50%), Gaps = 83/533 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
+ ++Q +G+ ++ LY N GIL D+MGLGKT+QTI+FL L+D +
Sbjct: 228 MRDYQIQGLNWMISLYHNGINGILADEMGLGKTLQTISFLG------------YLRDLR- 274
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MILEKLEACGVEVLITS 252
D G+ L++ P S + NW EF RW FNV G + +I L + +VLIT+
Sbjct: 275 DTPGFHLVVVPKSTLDNWYREFQRWVPGFNVVTLKGAKEERGQVIQNHLLSGDFDVLITT 334
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S L +++WE +++DEAHR+KN S L +R+R+ +TGT +QN +ME
Sbjct: 335 YEMCLREKSALKKLSWEYIVIDEAHRIKNVDSILSQIVRAFNSRSRLLITGTPLQNNLME 394
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L++L +++ P E F ++ Q D+ Q L VLR +LLR
Sbjct: 395 LWSLLNFLLPDVFSNSEDFETWFKGKGDENQ------------DQVVQQLHKVLRPFLLR 442
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K + L+ KE N +F ++D+Q+R Y+ +L+ KD+ G + + +
Sbjct: 443 RVKADVEKSLLPKKEIN-IFVGLTDMQRRWYKSILE---------KDIDAVNGG-VGRKQ 491
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGP 492
RL N+ +++L++ NH L D F
Sbjct: 492 GKTRLLNI--------------VMQLRKCCNHPYLF-------------DGAEPGPPFTT 524
Query: 493 DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL 552
D L V + GKM L++L+ KG ++L+FS RMLDILE +
Sbjct: 525 DEHL---------------VDNSGKMVILDRLLRKMKEKGSRVLIFSQMSRMLDILEDYC 569
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDP 611
+ + Y + R+DG T R + +DD+N S++ +FL++TRAGGLG+NL +A+ VV+FD
Sbjct: 570 LFREYQYCRIDGGTAHEDRIAAIDDYNQPDSEKFIFLLTTRAGGLGINLTTADIVVLFDS 629
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+WNP DLQA DR+ R GQ + V VFR ++ ++EE + R K +L + +
Sbjct: 630 DWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKLRLDQLVI 682
>gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST]
gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST]
Length = 871
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 288/596 (48%), Gaps = 79/596 (13%)
Query: 81 NVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+VF E E+E Q + + QF H EP+V +QVP + L H
Sbjct: 205 SVFTTREDEQEAVQPLIMKKPSFEHQFQHNAQNEPVVE--------VQVPLCVTRHLRPH 256
Query: 141 QREGVKFLYK-------LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
QREGV FLY+ L G IL D+MGLGKT+Q IA + T+LK
Sbjct: 257 QREGVAFLYECVTGLRMLEPPGCGAILADEMGLGKTLQCIALMY-----------TLLKT 305
Query: 194 NKVDK--KGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEACGVEVL 249
K VLI+ PSS++ NW+ E ++W S + GPN + + ++ + +L
Sbjct: 306 GPYGKPLAKRVLIVTPSSLVDNWDREITKWLRSERIFTFIVGPN-NKLKRYAQSPHIPIL 364
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ L V ++++ DE HRLKN K + L+ R R+ LTGT +QN
Sbjct: 365 IISYEMLAKQIGELETVKFDLMFCDEGHRLKNSNVKAFGVLNRLECRRRVLLTGTPIQND 424
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E ++L ++V PG++GT + F+ Y+ P+ QR + I + ER L A+ ++
Sbjct: 425 LQEFFSLINFVNPGAIGTYQDFKARYETPIVVSQRPGVLPQSIELGIERLNELNAITGRF 484
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K + VVFC S LQ + R L
Sbjct: 485 VLRRT-QEVINRYLPDKHEVVVFCHPSALQTQLTRTALSF-------------------- 523
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
D+ G D+ L L + L++I NH L+ + +P+
Sbjct: 524 -------YDSEKGADNAVSPLQL--ITILKKICNHPSLVSVQGKGDPESL---------- 564
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
+ L+ +G +D K+ +E L+ + + +KI++ SY + LD++
Sbjct: 565 ----VHLLAEQLPPWQRMGPTD---SAKLGIVEALLEAMLAMQEKIVIVSYYSKTLDMIG 617
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVI 608
Y + RLDGST R +V FN+ + + L+S +AGG GLNL+ A+R+V+
Sbjct: 618 GLCDHYNYKYCRLDGSTAGPDRSRIVAAFNNPANDSFILLLSAKAGGAGLNLIGASRLVL 677
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+D +WNPA DLQA R +R GQ++ V ++RLL+A S+EE ++ RQ+ K LS V
Sbjct: 678 YDNDWNPANDLQAMSRVWRDGQRKPVFIYRLLTAYSIEERIFQRQISKTSLSGTVV 733
>gi|430812744|emb|CCJ29865.1| unnamed protein product [Pneumocystis jirovecii]
Length = 796
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 303/605 (50%), Gaps = 75/605 (12%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQV--PASINCRLLE 139
DD ++E+E K + H E L + K +YP + V ++ L
Sbjct: 153 TIDDFHDKEEEENRKEIPEKPKNGPKTHKSLAEILGIKKQEKYPNVAVVIDPKLSKILRP 212
Query: 140 HQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKD 193
HQ EGVKFLYK +G I+ D+MGLGKT+Q I + + + ++ STI K
Sbjct: 213 HQIEGVKFLYKCVTGMVDFRANGCIMADEMGLGKTLQCITLMWTLLKQSPQAKRSTIQK- 271
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRW---STFN-VSIYHGPNRDMILEKLE----ACG 245
+I+CPSS+++NW E +W T N + I NRD ++ L A G
Sbjct: 272 --------AIIVCPSSLVRNWANELDKWLGKGTINPLIIDKKNNRDQLVLSLSKWVSATG 323
Query: 246 VEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
++ LI S++ R++ L + +++ DE HRLKN +S + A L+ + RI L
Sbjct: 324 KDIVQPILIISYEMLRMNIDQLKKCPIGLLLCDEGHRLKNSESLTFSALDSLQVQRRIIL 383
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E ++L ++V PG LG+R FR+ ++ P+ G+ ++ I D + +
Sbjct: 384 SGTPIQNDLSEYFSLLNFVNPGLLGSRSEFRKTFELPILKGRDALGTDKDREIGDHKLEE 443
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L ++ K+++RRT + + + K ++VVFC +S QK Y+ + E+ L+
Sbjct: 444 LSVLVNKFIIRRT-NDILSKYLPVKYEHVVFCNLSPFQKDLYKSFVSSREVNNLVKG--- 499
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
PL ++ K+L N P L+ ++ E PN
Sbjct: 500 -IGNQPLKAIDFLKKLCN------------HPTLLDIENDLKQFEHCFPN---------- 536
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSY 540
D + N+++ + GKM L++++ DKI+L S
Sbjct: 537 -------------DFIPKNSKDRDI----KIWYSGKMMVLDRMLARIRKDTNDKIVLISN 579
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ L++LEK + Y RLDG+ +N RQ L+D FN S + +FL+S++AGG GLN
Sbjct: 580 YTQTLNLLEKLCRSRRYGSLRLDGTMNTNKRQKLIDKFNDPESDEFIFLLSSKAGGCGLN 639
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+++FDP+WNPA D QA R +R GQK+ ++R ++ G++EE ++ RQ +KQ L
Sbjct: 640 LIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFIYRFIATGTIEEKIFQRQSHKQSL 699
Query: 660 SNIAV 664
S+ V
Sbjct: 700 SSCVV 704
>gi|448113324|ref|XP_004202321.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
gi|359465310|emb|CCE89015.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
Length = 1023
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 288/560 (51%), Gaps = 90/560 (16%)
Query: 117 VLSKDGEYPII----QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQT 172
+L+ + + P+I + P IN L +Q +G+ +L LY+N GIL D+MGLGKT+QT
Sbjct: 123 LLNDEEDVPVITEFTESPGFINGELRSYQIQGLNWLISLYENNLSGILADEMGLGKTLQT 182
Query: 173 IAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHG 231
I+FL + +++ G +II P S + NW EF+RW++ NV + G
Sbjct: 183 ISFLGYL---------RYIRN----IHGPHIIIVPKSTLDNWAREFARWTSDVNVLVLQG 229
Query: 232 PNR---DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
D++ +L C +V+ITS++ + + WE +I+DEAHR+KNE+S L
Sbjct: 230 DKEARADLVNNRLLTCDFDVVITSYEIVIKEKAAFRKFAWEYIIIDEAHRIKNEESLLSQ 289
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
++NR+ +TGT +QN + EL+ L +++ P G + F ++ G
Sbjct: 290 IIRVFHSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDSWFK---GSGSEEEGN 346
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
+DE L VL+ +LLRR K + L+ KE N V+ MSD+QKR Y+++L+
Sbjct: 347 ------SDEIISQLHKVLKPFLLRRVKSDVEKSLLPKKELN-VYLKMSDMQKRWYQKILE 399
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---L 465
KD+ G+ + E RL N+ +++L++ NH
Sbjct: 400 ---------KDIDAVNGAN-GKKESKTRLLNI--------------VMQLRKCCNHPYLF 435
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E +P P F D LV N+Q KM L+KL+
Sbjct: 436 EGAEPGP----------------PFTTDEHLV-FNSQ--------------KMIILDKLL 464
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-K 584
+ +G ++L+FS RMLDILE + + + Y + R+DG T R + +D++N S K
Sbjct: 465 KKFKEEGSRVLIFSQMSRMLDILEDYCMFRDYGYCRIDGQTDHADRVNSIDEYNKPGSDK 524
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFL++TRAGGLG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFRL++ +
Sbjct: 525 FVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRLVTENA 584
Query: 645 LEELVYTRQVYKQQLSNIAV 664
+EE + R K +L + +
Sbjct: 585 IEEKILERATQKLRLDQLVI 604
>gi|395818192|ref|XP_003782520.1| PREDICTED: DNA repair and recombination protein RAD54B [Otolemur
garnettii]
Length = 910
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 298/606 (49%), Gaps = 54/606 (8%)
Query: 124 YPIIQVPAS--INCRLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + C L HQ+EGV FLY+ ++G IL D+MGLGKT+Q I+ +
Sbjct: 282 FPLVDVVIDPYLVCHLRPHQKEGVVFLYECVMGMRMNGRYGAILADEMGLGKTLQCISLI 341
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 342 WTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDH 393
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E ++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 394 KVEEFIKVTFYSVLIISYEMLLRSLDQVKNIKFDLLICDEGHRLKNSAIKTTTALISLSC 453
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI L+GT +QN + E + L D+V PG LG+ +R Y+EP+ + +A E +
Sbjct: 454 EKRIILSGTPVQNDLQEFFALIDFVNPGILGSLSSYRRIYEEPIILSREPSASEEDKNLG 513
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + ++LRRT +E I + K +NVVFC + LQ YR+LL
Sbjct: 514 ERRAAELTCLTGLFILRRT-QEVINKYLPPKIENVVFCWPTALQIEIYRKLLN------- 565
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
V C L G ++ P L C+ L+++ NH L+ + +++
Sbjct: 566 ------------SQAVRFC-----LQGLENSPH---LICIGALKKLCNHPCLLFSSIKEK 605
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D ++ +++ + F + GK++ L KL+ +
Sbjct: 606 ECSSTCDENEERRLYEGLLNVFPADYNPLQFTEMES----GKLQVLLKLLAVIHDLRPTE 661
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP RQ +VD FNS S +FL+S++
Sbjct: 662 KVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPIVQRQHIVDGFNSKHSSDFIFLLSSK 721
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 722 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 781
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQ 712
Q+ KQ LS + + E +Q E LF + R ++ +L E +
Sbjct: 782 QISKQGLSGAVID---LTKTSEHIQFSVEELKNLFTLHESSRCVTHDLLDCECTGEKDHT 838
Query: 713 GQQQER 718
G E+
Sbjct: 839 GDTWEK 844
>gi|50285639|ref|XP_445248.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524552|emb|CAG58154.1| unnamed protein product [Candida glabrata]
Length = 1115
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 277/548 (50%), Gaps = 86/548 (15%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + PA IN +L ++Q +G+ +L L KN+ GIL D+MGLGKT+QTI+FL +
Sbjct: 162 YLFRESPAYINGQLRDYQVQGLNWLVSLDKNRIAGILADEMGLGKTLQTISFLGYL---- 217
Query: 184 ESSDSTILKDNKVDKK--GYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
+ KK G L+I P S + NW E ++W+ N I G + +I
Sbjct: 218 -----------RYIKKIPGPFLVIAPKSTLNNWLREINKWTPEVNAFILQGDKEERARLI 266
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+K AC +V+I S++ + ++NWE +++DEAHR+KNE+S L E ++N
Sbjct: 267 QDKFMACDFDVVIASYEIIIREKAAFRKMNWEYIMIDEAHRIKNEESMLSQVLREFHSKN 326
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F E++ + + E+ ++
Sbjct: 327 RLLITGTPLQNNLHELWALLNFLLPDIFSDSQDFDEWFSKETDEEDQ----EKIVK---- 378
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L VL+ +LLRR K + L+ KE N V+ MS +QK+ YR++L+
Sbjct: 379 ---QLHTVLQPFLLRRIKSDVETSLLPKKELN-VYVGMSPMQKKWYRQILE--------- 425
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KD+ N D +L +++L++ NH L
Sbjct: 426 KDIDAV---------------NADSGSKESKTRLLNIVMQLRKCCNHPYLF--------- 461
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV + K++ L+KL+ G ++L+
Sbjct: 462 ----DGAEPGPPYTTDEHLVYNSE---------------KLKVLDKLLRKLKEAGSRVLI 502
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +D++N+ SK+ +FL++TRAGGL
Sbjct: 503 FSQMSRVLDILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYNAPDSKKFLFLLTTRAGGL 562
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ VV+FD +WNP DLQA DR+ R GQK+ V VFR ++ S+EE + R K
Sbjct: 563 GINLTTADVVVLFDSDWNPQADLQAMDRAHRIGQKKQVRVFRFVTDNSVEEKILERATQK 622
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 623 LRLDQLVI 630
>gi|308080914|ref|NP_001183699.1| uncharacterized protein LOC100502292 [Zea mays]
gi|238013978|gb|ACR38024.1| unknown [Zea mays]
Length = 265
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 177/269 (65%), Gaps = 19/269 (7%)
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKR 671
+WNPAQDLQAQDRSFR+GQ+RHV VFRLL AGSLEEL+Y+RQ+YKQQLSNIAVSGK+E+R
Sbjct: 10 SWNPAQDLQAQDRSFRYGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIERR 69
Query: 672 YFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLET 731
YFEGVQD K+FQGELFGICNLFRDLSD LFTSEIIE H E G+ T
Sbjct: 70 YFEGVQDDKKFQGELFGICNLFRDLSDKLFTSEIIEMHGEHGKSSATE----------AT 119
Query: 732 HIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLEDMGIVYAHRNDDIVN-----KQPGF 786
I D++ GS+ + S T L D GIVYAHRN+D+VN ++ G
Sbjct: 120 GIREIVDTDLF---GSQENRKSSTATTHTDDQKLVDFGIVYAHRNEDVVNMRTDGREKGG 176
Query: 787 QRKKEESIPQDLSSRPPPIHSKRRNLLDCADGKESLAS-SKDRKNIEYSLLARFMGMDVF 845
+ +S ++L S+ H+ + +E S S ++K E+S +A FMGMD
Sbjct: 177 ADETVQSSLEELLSKNETKHTAMEKSYSSEEKREVARSYSLEQKKKEFSCIASFMGMDDL 236
Query: 846 EFSKWILSATPSAREKLLQDYRKRKKIPK 874
EFSKW+LSA+P R ++LQDYR++KK K
Sbjct: 237 EFSKWLLSASPHQRSEVLQDYRRKKKNQK 265
>gi|50310725|ref|XP_455384.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644520|emb|CAG98092.1| KLLA0F06710p [Kluyveromyces lactis]
Length = 1096
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 299/605 (49%), Gaps = 85/605 (14%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D ++ + PA +N +L +Q +G+ +L L+KN+ GIL D+MGLGKT+QTIAFL +
Sbjct: 125 DVDFQFRESPAYVNGQLRPYQIQGLNWLVALHKNQLAGILADEMGLGKTLQTIAFLGYL- 183
Query: 181 GKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---M 236
I K N G L+I P S + NW E +RW+ + I G + +
Sbjct: 184 -------RYIEKKN-----GPFLVIAPKSTLNNWLREINRWTPEVSAFILQGDKEERSKL 231
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+KL AC ++ + S++ + +++WE V++DEAHR+KNE+S L E +R
Sbjct: 232 CHDKLLACDFDICVASYEIIIREKASFKKIDWEYVVIDEAHRIKNEESMLSQVLREFSSR 291
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
NR+ +TGT +QN + EL+ L +++ P F E++ +
Sbjct: 292 NRLLITGTPLQNNLHELWALLNFLLPDIFADSATFDEWFSSESSEEDKEKVV-------- 343
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ L VL +LLRR K + G L+ KE N V+ MS +QK+ Y+++L+
Sbjct: 344 ---KQLHTVLSPFLLRRIKNDVEGSLLPKKELN-VYVGMSSMQKKWYKQILE-------- 391
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
KD+ GS Q E RL N+ +++L++ NH L
Sbjct: 392 -KDIDAVNGSN-GQKESKTRLLNI--------------VMQLRKCCNHPYLF-------- 427
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D + D LV +A+ + L +G ++L
Sbjct: 428 -----DGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKFK---------------EQGSRVL 467
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS R+LDILE + + Y + R+DGST R + +DD+N+ SK+ +FL++TRAGG
Sbjct: 468 IFSQMSRVLDILEDYCYFREYEYCRIDGSTAHEDRINAIDDYNAPDSKKFIFLLTTRAGG 527
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ S+EE + R
Sbjct: 528 LGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVRVFRFVTDNSVEEKILERATQ 587
Query: 656 KQQLSNIAV-SGKLEKRYFEGVQDCKEFQGELF--GICNLFRDLSDNLFTSEIIESHEEQ 712
K +L + + G++ + E D KE + G ++F+ + TS+ H +
Sbjct: 588 KLKLDQLVIQQGRVTNKKKENKNDSKEGLLSMIQHGAVDVFKSNDSSAMTSQTGTPHPDD 647
Query: 713 GQQQE 717
G+ ++
Sbjct: 648 GKDKD 652
>gi|367040973|ref|XP_003650867.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
gi|346998128|gb|AEO64531.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
Length = 1125
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I+ + ++Q G+ +L L++N GIL D+MGLGKT+QTIAFL +
Sbjct: 179 PAFIHGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G LI P S + NW EF++W+ NV + G + +I E+L
Sbjct: 229 ---RHIMGITGPHLITVPKSTLDNWNREFAKWTPEVNVLVLQGAKEERHQLINERLVDES 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----GQD--------RDQDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKSDVEKSLLPKKEVN-VYVGMSEMQVKWYQKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 485
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 486 -----------------------------VYNSGKMLVLDKLLKRLQKQGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + +GY + R+DGST R + +D++N S K +FL++TRAGGLG+NL
Sbjct: 517 RLLDILEDYCVFRGYKYCRIDGSTAHADRIAAIDEYNKPDSDKFIFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 577 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 636
Query: 662 IAV 664
+ +
Sbjct: 637 LVI 639
>gi|388583467|gb|EIM23769.1| hypothetical protein WALSEDRAFT_56274 [Wallemia sebi CBS 633.66]
Length = 1162
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 182/585 (31%), Positives = 294/585 (50%), Gaps = 84/585 (14%)
Query: 124 YPIIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
+ + PA I NC++ ++Q +G+ ++ L+ N GIL D+MGLGKT+QTI+FLA
Sbjct: 176 FAFTETPAFIQNCQMRDYQVQGLNWMIGLHHNGINGILADEMGLGKTLQTISFLA----- 230
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MIL 238
LK K D GY L+ P S + NW EF++W F V + G + ++
Sbjct: 231 -------YLKHFK-DISGYHLVCVPKSTLDNWAREFTKWCPDFKVVVLQGNKEEREKIVK 282
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
E + +VLI S++ S + ++WE +I+DEAHR+KN S L +RNR
Sbjct: 283 ESILPGDFDVLIASYEICLREKSAIKRLSWEYIIIDEAHRIKNANSLLSQIVRIFNSRNR 342
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P + E F +++ T +DE
Sbjct: 343 LLITGTPLQNNLQELWALLNFLLPDVFSSAEDFDDWF----------TNNRDGKENSDEV 392
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ L VLR +LLRR K + L+ KE N ++ ++D+Q++ Y+ +I K
Sbjct: 393 VKQLHKVLRPFLLRRVKADVEKSLLPKKEIN-LYVGLTDMQRKWYK---------GIIEK 442
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D+ G ++ E RL N+ +++L++ NH L
Sbjct: 443 DIDLVNGMGSSKKEGKTRLLNI--------------VMQLRKCCNHPYLF---------- 478
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
D + D LV + GKM L+KL+ S +KG ++L+F
Sbjct: 479 ---DGAEPGPPYTTDEHLVF---------------NSGKMLILDKLLKSMKAKGSRVLIF 520
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLG 597
S R+LDILE + + + Y + R+DG T + R S +D++N S K +FL++TRAGGLG
Sbjct: 521 SQMSRVLDILEDYCMFRDYQYCRIDGQTSHDDRISAIDEYNKEGSEKYIFLLTTRAGGLG 580
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
+ L +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE + R K
Sbjct: 581 ITLNTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVYVFRFVTEDAVEERILERAAQKL 640
Query: 658 QLSNIAV-SGKLEKRYFEGVQDCKEF--QGELFGICNLFRDLSDN 699
+L + + G+ ++ G + + G I N R++ DN
Sbjct: 641 RLDQLVIQQGRQTQQKNAGKDELTDMIQHGAEKIINNQAREIVDN 685
>gi|343429407|emb|CBQ72980.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Sporisorium reilianum SRZ2]
Length = 1110
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 276/541 (51%), Gaps = 84/541 (15%)
Query: 130 PASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
PA + ++ ++Q +G+ ++ LY N GIL D+MGLGKT+QTI+FL
Sbjct: 221 PAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLG----------- 269
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MILEKLEAC 244
L+D + D G+ L++ P S + NW EF RW FNV G + +I + L
Sbjct: 270 -YLRDFR-DTPGFHLVVVPKSTLDNWYREFHRWVPGFNVVTLKGSKEEREKVIQDHLLPQ 327
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+VLIT+++ S L +++WE +++DEAHR+KN S L +R+R+ +TGT
Sbjct: 328 DFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSRLLITGT 387
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN +MEL++L +++ P E F ++ Q D+ Q L
Sbjct: 388 PLQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQ------------DQVVQQLHK 435
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VLR +LLRR K + L+ KE N +F ++++Q++ Y+ +L+ KD+
Sbjct: 436 VLRPFLLRRVKADVEKSLLPKKEIN-IFVGLTEMQRKWYKSILE---------KDIDAVN 485
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G + + E RL N+ +++L++ NH L D
Sbjct: 486 GG-VGKKEGKTRLLNI--------------VMQLRKCCNHPYLF-------------DGA 517
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
F D L V + GKM L++L++ KG ++L+FS RM
Sbjct: 518 EPGPPFTTDEHL---------------VDNSGKMVILDRLLHKMKQKGSRVLIFSQMSRM 562
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSA 603
LDILE + + + Y + R+DG T + R + +D++N S K VFL++TRAGGLG+NL +A
Sbjct: 563 LDILEDYCLFREYQYCRIDGGTAHDDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLTTA 622
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VV+FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE + R K +L +
Sbjct: 623 DIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKLRLDQLV 682
Query: 664 V 664
+
Sbjct: 683 I 683
>gi|167375276|ref|XP_001739827.1| transcription regulatory protein SNF2 [Entamoeba dispar SAW760]
gi|165896374|gb|EDR23803.1| transcription regulatory protein SNF2, putative [Entamoeba dispar
SAW760]
Length = 756
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 283/543 (52%), Gaps = 81/543 (14%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV----FGKDESSDSTILK 192
L EHQR GVK++Y+L+K GGI+GD+MGLGKT+ +AFL + F K+++ T
Sbjct: 109 LFEHQRIGVKWMYELFKQHAGGIVGDEMGLGKTLMVLAFLEGLQCTFFNKEKTETLTC-- 166
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG----PNRDMILEKLEACGVE 247
G L++ P ++I +W E R+ + V I H N+D I L
Sbjct: 167 -------GNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTNKDNI-NLLNTTHNS 218
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T+++ RIH ILSE W +++DE H++KN +++ A L+ R+ L+G+ +Q
Sbjct: 219 LYLTTYEFIRIHKDILSEYPWFCIVLDEGHKIKNPNAEISKAVKLLEAHQRLLLSGSPIQ 278
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++LFD+V PG LGT F++ + +P+++G +A A + + L ++
Sbjct: 279 NNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSASYFQFMAALKCAKGLRDMIA 338
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+ LRR K+E + L +++ ++C ++ Q+ Y + I +I+ D
Sbjct: 339 PFFLRRIKKEVLPSLPT-RQEKFIYCPLTPKQRSMYLEYVNSSSIAKVIDGD-------- 389
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+D L D+ L++I NH LI P+ K++
Sbjct: 390 ---------MDMLAAIDT------------LRKICNHPHLINKTEDLTPETIYKES---- 424
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
K++ + L+ + +G K L+F + +ML+I
Sbjct: 425 ----------------------------SKLKYVCDLLKQFQKEGHKALIFCQTRQMLNI 456
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
+E+ ++ + + + R+DG SN R + FN+ P+ VF+++TR GGLG+NL A+RV+
Sbjct: 457 IEQMMLNEKFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVI 516
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
++DP+WNP D QA++R+ R GQ R VI++RL+ +G++EE +Y +Q+ K+ LS+ + +
Sbjct: 517 MYDPDWNPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNE 576
Query: 668 LEK 670
EK
Sbjct: 577 EEK 579
>gi|374108737|gb|AEY97643.1| FAFL040Wp [Ashbya gossypii FDAG1]
Length = 1078
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 292/588 (49%), Gaps = 85/588 (14%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
P + D E+ + P ++ RL +Q +GV +L L+KN GIL D+MGLGKT+QTI
Sbjct: 114 PDAAAADYEFQFRESPGFVDGRLRPYQVQGVNWLVSLHKNNLAGILADEMGLGKTLQTIT 173
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN 233
FL + I K K+G L+I P S + NW+ E +RW+ + I G
Sbjct: 174 FLGYL--------RYIEK-----KRGPFLVIAPKSTLNNWQREINRWTPDVDAFILQGDK 220
Query: 234 RD---MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
+ + E+L AC +V I S++ + +++WE +++DEAHR+KNE+S L
Sbjct: 221 EERARLCQERLLACNFDVAIASYEIIIREKASFKKIDWEYIVIDEAHRIKNEESMLSQVL 280
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
E +RNR+ +TGT +QN + EL+ L +++ P F E++ +
Sbjct: 281 REFSSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDSAAFDEWFSSEASDDDK------ 334
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
D+ + L +L+ +LLRR K + L+ KE N ++ MS +Q++ Y+++L+
Sbjct: 335 -----DKIVKQLHTILQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQRKWYKQILE-- 386
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 387 -------KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF-- 422
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
D + D LV +A+ + L
Sbjct: 423 -----------DGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKLK---------------E 456
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
G ++L+FS R+LDILE + +GY + R+DGST R +D++N+ S++ +FL+
Sbjct: 457 DGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYNAPDSRKFIFLL 516
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
+TRAGGLG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE +
Sbjct: 517 TTRAGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKI 576
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYFEGVQDCKEFQGELF--GICNLFR 694
R K +L + + G+ E +D K+ + G ++FR
Sbjct: 577 LERATQKLRLDQLVIQQGRTSISKKENAKDAKDALLSMIQHGAVDMFR 624
>gi|45198479|ref|NP_985508.1| AFL040Wp [Ashbya gossypii ATCC 10895]
gi|44984430|gb|AAS53332.1| AFL040Wp [Ashbya gossypii ATCC 10895]
Length = 1086
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 292/588 (49%), Gaps = 85/588 (14%)
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
P + D E+ + P ++ RL +Q +GV +L L+KN GIL D+MGLGKT+QTI
Sbjct: 122 PDAAAADYEFQFRESPGFVDGRLRPYQVQGVNWLVSLHKNNLAGILADEMGLGKTLQTIT 181
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN 233
FL + I K K+G L+I P S + NW+ E +RW+ + I G
Sbjct: 182 FLGYL--------RYIEK-----KRGPFLVIAPKSTLNNWQREINRWTPDVDAFILQGDK 228
Query: 234 RD---MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
+ + E+L AC +V I S++ + +++WE +++DEAHR+KNE+S L
Sbjct: 229 EERARLCQERLLACNFDVAIASYEIIIREKASFKKIDWEYIVIDEAHRIKNEESMLSQVL 288
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
E +RNR+ +TGT +QN + EL+ L +++ P F E++ +
Sbjct: 289 REFSSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDSAAFDEWFSSEASDDDK------ 342
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
D+ + L +L+ +LLRR K + L+ KE N ++ MS +Q++ Y+++L+
Sbjct: 343 -----DKIVKQLHTILQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQRKWYKQILE-- 394
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 395 -------KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF-- 430
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
D + D LV +A+ + L
Sbjct: 431 -----------DGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKLK---------------E 464
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
G ++L+FS R+LDILE + +GY + R+DGST R +D++N+ S++ +FL+
Sbjct: 465 DGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYNAPDSRKFIFLL 524
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
+TRAGGLG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE +
Sbjct: 525 TTRAGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKI 584
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYFEGVQDCKEFQGELF--GICNLFR 694
R K +L + + G+ E +D K+ + G ++FR
Sbjct: 585 LERATQKLRLDQLVIQQGRTSISKKENAKDAKDALLSMIQHGAVDMFR 632
>gi|328354642|emb|CCA41039.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Komagataella pastoris
CBS 7435]
Length = 1012
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 283/549 (51%), Gaps = 94/549 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
I + P+ I+ L ++Q +G+ +L L++N GIL D+MGLGKT+QTIAFL
Sbjct: 116 ITESPSFIHGTLRDYQIQGLNWLISLHENCLSGILADEMGLGKTLQTIAFLGH------- 168
Query: 186 SDSTILKDNK-VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRDMIL---EK 240
L+ NK +D G ++I P S + NW EF++W+ N + G + L +K
Sbjct: 169 -----LRYNKGID--GPHIVIVPKSTLDNWRREFAKWTPDVNTLVLQGTKEERALLLKDK 221
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
L +V ITSF+ + L ++ W+ +++DEAHR+KNE+S L +RNR+
Sbjct: 222 LMEADFDVCITSFEMVIREKAKLGKIRWQYIVIDEAHRIKNEESALSQIIRLFYSRNRLL 281
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G + F E+++ + DE Q
Sbjct: 282 ITGTPLQNNLHELWALLNFILPDVFGESDVFDEWFESQSQD-------------QDEVVQ 328
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VL +LLRR K + L+ KE N ++ M+++Q + YR LL+ KD+
Sbjct: 329 KLHKVLSPFLLRRVKSDVEKSLLPKKEVN-LYVGMTEMQIKLYRNLLE---------KDI 378
Query: 421 -PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEP 476
+CG + E RL N+ +++L++ NH E ++P P
Sbjct: 379 DAVNCG--FGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGVEPGP---- 418
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
F D LV +A KM L+KL+ +G ++L
Sbjct: 419 ------------PFTTDEHLVYNSA---------------KMIVLDKLLKKMKEQGSRVL 451
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS R+LDILE + + Y + R+DGST R + +D++N SK+ +FL++TRAGG
Sbjct: 452 IFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEDRINAIDEYNKPDSKKFIFLLTTRAGG 511
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V R
Sbjct: 512 LGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVQVFRFVTENAIEEKVLERAAQ 571
Query: 656 KQQLSNIAV 664
K +L + +
Sbjct: 572 KLRLDQLVI 580
>gi|241953595|ref|XP_002419519.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
gi|223642859|emb|CAX43114.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
Length = 1054
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 283/552 (51%), Gaps = 89/552 (16%)
Query: 126 IIQVPASIN-CRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
+ + P+ I +L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL +
Sbjct: 125 LTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL----- 179
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEK 240
+K +D G ++I P S + NW EF++W+ NV + G ++I ++
Sbjct: 180 ----RYIK--HID--GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRANIIKDQ 231
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
L +VLITSF+ S L + WE ++VDEAHR+KNE S L +RNR+
Sbjct: 232 LYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLL 291
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD----EPLKHGQRLTAPERFIRIAD 356
+TGT +QN + EL+ L +++ P G + F E +D E L Q+ ++ +
Sbjct: 292 ITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNTEELDEEQKQKKQDKAV---- 347
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
Q L +L +LLRR K + L+ E N V+ M+D+Q Y+RLL+
Sbjct: 348 ---QELHQLLSPFLLRRVKADVEKSLLPKIETN-VYIGMTDMQVEWYKRLLE-------- 395
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPR 473
KD+ G + + E RL L +++L++ NH L +P P
Sbjct: 396 -KDIDAVNGV-VGKREGKTRL--------------LNIVMQLRKCCNHPYLFDGAEPGPP 439
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
D+ V + GKM L+K++ + ++G
Sbjct: 440 YTTDEHL-------------------------------VYNSGKMIILDKMLKKFKAEGS 468
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTR 592
++L+FS R+LDILE + + Y + R+DGST R +D++N+ S K +FL++TR
Sbjct: 469 RVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTSHEDRIEAIDEYNAPNSDKFIFLLTTR 528
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGGLG+NL SA+ V+++D +WNP DLQA DR+ R GQK+ V VFR ++ ++EE V R
Sbjct: 529 AGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLER 588
Query: 653 QVYKQQLSNIAV 664
K +L + +
Sbjct: 589 AAQKLRLDQLVI 600
>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 287/573 (50%), Gaps = 62/573 (10%)
Query: 113 FEPLVL-------SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKH------GGI 159
+PLVL S G + I V + + L HQREGV+F++ H G I
Sbjct: 159 IDPLVLWQPDECDSTAGNFIPIIVDSLLVQFLRPHQREGVQFMFDCVSGLHSAANINGCI 218
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
L DDMGLGKT+Q+I L + G+ D + +K +I+ P+S++ NWE E
Sbjct: 219 LADDMGLGKTLQSITLLYTLLGQG-------FDDKPMVRKA--IIVTPTSLVSNWEAEIK 269
Query: 220 RWSTFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILS-EVNWEIV 271
+W +V + RD ++ +++ ++VLI S++++R+H S S + + +++
Sbjct: 270 KWVGESVKLIALCETTRDDVVSGIDSFANPRSNLQVLIVSYETFRMHSSKFSHDESCDLL 329
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I DEAHRLKN+++ A L + RI L+GT MQN + E + + ++ PG LG +F
Sbjct: 330 ICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYF 389
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R +Y+ P+ G+ TA E ++ ER L A + +++LRRT HL K VV
Sbjct: 390 RRYYETPIICGREPTATEEEKKLGAERSGELSAKVNQFILRRTNALLSNHL-PPKIVEVV 448
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
C ++ LQ Y + ++ I ++ S +
Sbjct: 449 CCKLTPLQSELYNHFIHSKNVKRAITEETKKS--------------------------KI 482
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L + L+++ NH +LI R E F P + G + S S
Sbjct: 483 LAYITALKKLCNHPKLIYDTIRSGTPGT-SGFEDCIRFFPP--GMFSGRSGTWSGGDGSW 539
Query: 512 VKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
++ GKM L +L+ + D+I+L S + LD+ + + Y RLDG+T
Sbjct: 540 IELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGATSIGK 599
Query: 571 RQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
RQ LV+ FN S + VFL+S++AGG GLNL+ NR+V+FDP+WNPA D QA R +R G
Sbjct: 600 RQKLVNRFNDQSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDG 659
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
QK+ V ++R LS G++EE VY RQ+ K+ L +
Sbjct: 660 QKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKV 692
>gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
Length = 682
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 300/587 (51%), Gaps = 82/587 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN +G I+ D MGLGKT+Q I+ +
Sbjct: 76 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANGCIMADGMGLGKTLQCISLMWT 135
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVS--IY 229
+ + E+ +TI K +I CPSS++ NW E +W + F V +
Sbjct: 136 LLKQSPEAGKTTIQK---------CIIACPSSLVGNWANELVKWLGKDAVTPFAVDGKVP 186
Query: 230 HGPNRDMILEKLEACGVE----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
I + A G VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 187 KAELTSQIKQWAIASGRSVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKESL 246
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 247 TWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGRDA 306
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E + DER L ++ K+++RRT + +L + K ++VVFC +S Q Y
Sbjct: 307 AGTEEDRKKGDERLLELSGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLSQFQLGLYNH 365
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 366 FIQSPEIKSL------------------------LRGKGSQP----LKAIGLLKKLCNHP 397
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
+L+ + RD P + E D V A+ D+KS GKM L++
Sbjct: 398 DLLDLS-RDLPGCEHTYPE----------DYVPPEARGRD----RDIKSWYSGKMMVLDR 442
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ EK +GY RLDG+ N RQ LVD FN
Sbjct: 443 MLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVNKRQKLVDKFNDPN 502
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 503 GEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 562
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
GS+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 563 TGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 609
>gi|218195896|gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group]
Length = 987
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 194/632 (30%), Positives = 315/632 (49%), Gaps = 79/632 (12%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L HQREG+++L+ L+ GGILGDDMGLGKT+Q AFLA +F S
Sbjct: 271 LPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLF------HS 324
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVE 247
++K VL++ P +++ +W E S + + Y GPN + +L+ E
Sbjct: 325 RLIK--------RVLVVAPKTLLTHWTKELSVVGLKDKIRDYSGPNANARNYELKYAFKE 376
Query: 248 --VLITSFDSYR-----IHGSILSEVN------WEIVIVDEAHRLKNEKSKLYMACLELK 294
+L+T++D R I G+ ++ + W VI+DE H +KN K++ + E+
Sbjct: 377 GGILLTTYDIVRNNFKMIKGNFTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIP 436
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
+RI ++GT +QN + E++ LF + P LG +E F+ Y+ + G A R I
Sbjct: 437 CVHRIVISGTPIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHI 496
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMG-------KEDNVVFCTMSDLQKRAYRRLL 407
+ L ++ Y LRR K E G K + +++ ++ Q++ Y
Sbjct: 497 GSNVAKELRERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLY---- 552
Query: 408 QLPEIQCLINKDLPCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ +N +L S GSPL + K++ CD P L+ + L
Sbjct: 553 -----EAFLNSELVHSSMQGSPLAAITILKKI-----CDH-------PLLLTKKAAEGVL 595
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E + ++ + + A D D V E +G DV SC K+ + L+
Sbjct: 596 EGMDVMLNNQEMGMVEKMAMNLADMAHDDDDV------ELQVG-QDV-SC-KLSFMMSLL 646
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+ S+G +L+FS + +ML+I+++ +I +GY F R+DG+T + R+ +V DF P
Sbjct: 647 QNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRIDGTTKISERERIVKDFQEGPGAP 706
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+FL++T+ GGLGL L A RV++ DP WNP+ D Q+ DR++R GQ + VIV+RL+++G++
Sbjct: 707 IFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVDRAYRIGQMKDVIVYRLMTSGTI 766
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEI 705
EE +Y QV+K L A K + RYF ++ Q ELF + D+S L ++
Sbjct: 767 EEKIYKLQVFKGALFRTATEHKEQTRYFSK----RDIQ-ELFSLPEQGFDVS--LTQKQL 819
Query: 706 IESHEEQGQQQE--RHHCT---NQGFKGLETH 732
E H +Q + R H QG G+ H
Sbjct: 820 QEEHGQQLVMDDSLRKHIQFLEQQGIAGVSHH 851
>gi|407042678|gb|EKE41477.1| helicase domain containing protein [Entamoeba nuttalli P19]
Length = 759
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 282/543 (51%), Gaps = 81/543 (14%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV----FGKDESSDSTILK 192
L EHQR GVK++Y+L+K GGI+GD+MGLGKT+ +AFL + F K+++ T
Sbjct: 109 LFEHQRIGVKWMYELFKQHAGGIIGDEMGLGKTLMVLAFLEGLQCTFFNKEKTETLTC-- 166
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG----PNRDMILEKLEACGVE 247
G L++ P ++I +W E R+ + V I H N+D I L
Sbjct: 167 -------GNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTNKDNI-NLLNTTHNS 218
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T+++ R H ILSE W +++DE H++KN +++ A L+ R+ L+G+ +Q
Sbjct: 219 LYLTTYEFIRTHKDILSEYLWFCIVLDEGHKIKNPNAEISKAVKMLEAHQRLLLSGSPIQ 278
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++LFD+V PG LGT F++ + +P+++G +A A + + L ++
Sbjct: 279 NNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSASYFQFMAALKCAKGLRDMIA 338
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+ LRR K+E + L +++ V+C ++ Q+ Y + I +I+ D
Sbjct: 339 PFFLRRIKKEVLPSLPT-RQEKFVYCPLTPKQRSMYLEYVNSSSIAKVIDGD-------- 389
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+D L D+ L++I NH LI P+ K++
Sbjct: 390 ---------MDMLAAIDT------------LRKICNHPHLINKTEDLTPETIYKES---- 424
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
K++ + L+ + +G K L+F + +ML+I
Sbjct: 425 ----------------------------SKLKYVCDLLKQFKKEGHKALIFCQTRQMLNI 456
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
+E+ ++ + + + R+DG SN R + FN+ P+ VF+++TR GGLG+NL A+RV+
Sbjct: 457 IEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVI 516
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
++DP+WNP D QA++R+ R GQ R VI++RL+ +G++EE +Y +Q+ K+ LS+ + +
Sbjct: 517 MYDPDWNPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNE 576
Query: 668 LEK 670
EK
Sbjct: 577 EEK 579
>gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi]
Length = 814
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 268/544 (49%), Gaps = 81/544 (14%)
Query: 137 LLEHQREGVKFLYKLYKNK----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y +G I+ D+MGLGKT+Q I L + + TI
Sbjct: 183 LRPHQREGVRFMYDCVTGAKGDFNGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPTI-- 240
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEAC------ 244
G +I+CPSS+++NW EF +W N G +++ ++LE
Sbjct: 241 -------GKAIIVCPSSLVKNWYKEFGKWLGCRVNCLAMDGGSKEHTTKELEQYMANQSY 293
Query: 245 --GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VLI S++++R++ IL+ V+ DE HRLKN ++ Y A + LKT+ R+ L+
Sbjct: 294 RHGTPVLIISYETFRLYADILNASEVGAVLCDEGHRLKNCENLTYQALMGLKTKRRVLLS 353
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E Y+L +V PG LGT FR+ Y+ P+ GQ + + A ER Q L
Sbjct: 354 GTPIQNDLTEYYSLLHFVNPGMLGTTAEFRKQYEIPILRGQDANSTDTEREKAAERLQEL 413
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
A++ + ++RRT +L + E N + RAY
Sbjct: 414 AALVNRCMIRRTSALLTKYLPVKFEMNRI------QSGRAY------------------- 448
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
N +G L + L+++ NH +L+ ++ D K
Sbjct: 449 ----------------NNNGQSRKATLTALSNITTLKKLCNHPDLVYDKIQEGADGFEKA 492
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYS 541
+ A + P + +G K+ L+ ++ S + DKI+L S
Sbjct: 493 GNILPANYSP--------RELRPELG-------AKLLLLDCMLASIKTNTNDKIVLVSNY 537
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ LD+ EK ++GY + RLDG+ R +VD FNS S +F++S++AGG GLNL
Sbjct: 538 TQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNSPDSSDFIFMLSSKAGGCGLNL 597
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ GS+EE ++ RQ +K+ LS
Sbjct: 598 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALS 657
Query: 661 NIAV 664
V
Sbjct: 658 TTVV 661
>gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta]
Length = 843
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 300/609 (49%), Gaps = 90/609 (14%)
Query: 87 EKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSK-----------------------DGE 123
EK E+ E+ R + F+ +T F PL LSK D E
Sbjct: 178 EKNLEEPVEELSRKK---FKVSNTNAFVPLSLSKGPTRLALNSEPIVMPYLNSTEWMDQE 234
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAA 178
+ V + +L EHQR GV FLY+ + G IL D+MGLGKT+Q IA +
Sbjct: 235 EQEVSVDPCLVAKLREHQRYGVVFLYECLMGLRVPDYFGAILADEMGLGKTLQCIALIWT 294
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI 237
+ K + + VLII PSS+ NWE EF +W + + Y +
Sbjct: 295 MLKKGPYGKPIVKR---------VLIITPSSLCNNWEKEFVKWLGSHRIFPYVVGAKTKP 345
Query: 238 LEKLEACGVEVLITSFDSY-RIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ ++ V+I S++ + + H I +E+ +++++ DE HRLKN K E +
Sbjct: 346 KDFIKYPKNSVMIISYEMFIKCHMEI-NEIVFDLIVCDEGHRLKNNNVKAAKLLYEANCK 404
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RI LTGT +QN + E Y L D++ PG LGT ++ +Y+EP+ Q A + + +
Sbjct: 405 KRIILTGTPIQNDLKEFYALIDFINPGILGTATEYKNYYEEPIVASQCPHANDDVLSLGK 464
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
ER L + ++LRRT + TI + K + V+FC++S QK Y +
Sbjct: 465 ERSTELYERTKSFILRRT-QSTINKYLPHKYEIVLFCSLSKKQKDLYSLV-----TDAWF 518
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
NK C L+ +S F ++ + L++I NH L
Sbjct: 519 NK--------------IC-----LEDKNSMHFSII----IALKKICNHPNLF-------- 547
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
K+ L +A+ + + Q+ +F + CGK+ L+ L+ + +K++
Sbjct: 548 -INEKENVLYNALSKTCMSQI---KQDNNF-----NEYCGKVTILQTLLRNLKKTDEKLV 598
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGG 595
L SY + LD+LE + F RLDGSTPS++R + + FN+ + + +V L+S +AGG
Sbjct: 599 LVSYYTQTLDLLEIICDMEKLKFLRLDGSTPSSVRLKITEQFNTRTDNSKVLLLSAKAGG 658
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLNL A+R+V+FD +WNPA D+QA R +R GQKR+V ++RLL+ G++EE +Y RQ+
Sbjct: 659 VGLNLPGASRLVLFDSDWNPASDMQAMARIWRDGQKRNVYIYRLLTTGTIEEKIYQRQIS 718
Query: 656 KQQLSNIAV 664
K LS V
Sbjct: 719 KANLSESVV 727
>gi|389748911|gb|EIM90088.1| SNF2 family domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 825
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 186/577 (32%), Positives = 304/577 (52%), Gaps = 76/577 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + + ++G I+ D+MGLGKT+Q IA L
Sbjct: 212 RVPVVIDPRLCKVLRPHQVEGVKFLYRCTTGMVVEGQYGCIMADEMGLGKTLQCIALLW- 270
Query: 179 VFGKDESSDSTILKDNKVDKKGYV---LIICPSSVIQNWEIEFSRW----STFNVSIYHG 231
T+LK + KG + +I CPSS+++NW E ++W + +++
Sbjct: 271 ----------TLLKQSPRSGKGTLEKCIIACPSSLVKNWANELAKWLGKDTITPMAVDGK 320
Query: 232 PNRDMILEKLE----ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEK 283
+ +L+++E A G V +I S+++ R L+ +++ DE HRLKN +
Sbjct: 321 GGKAELLQRVERWVAASGRNVTQPVMIVSYETLRTLTVYLNGCQIGLLLCDEGHRLKNSE 380
Query: 284 SKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQ 343
S + A + + R+ L+GT +QN + E ++L ++ P LGT+ FR+ ++ + G+
Sbjct: 381 SLTFQALDAINVKRRVILSGTPIQNDLSEYFSLLNFANPNLLGTKNDFRKNFENIIIRGR 440
Query: 344 RLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY 403
A ++ +++ + L ++ K+++RRT + +L + K + VVFC +SD Q + Y
Sbjct: 441 DADATDKDKAECEKKLKELGELVSKFIIRRTNDLLSKYLPV-KYEQVVFCGLSDFQLQLY 499
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
R + PEI+ L L G +S P L + L+++ N
Sbjct: 500 RLFISSPEIKAL------------------------LRGAESQP----LKAINILKKLCN 531
Query: 464 HLELIKPNPRDEPDKQRKDAELASAVF---GPDIDLVGGNAQNESFIGLS-DVKSCGKMR 519
H EL+ + P R L F G D + G ++ G + + GK
Sbjct: 532 HPELL-----NLPQDLRGCDHLIPEGFCGAGDDSNKPKGGSRGGRDAGQNVHTEWSGKFI 586
Query: 520 ALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
LE+ ++ ++ DKI+L S + LDI EK L K Y + RLDG+ RQ LVD F
Sbjct: 587 VLERFLHRLHTETNDKIVLISNYTQTLDIFEKMLRSKKYGYFRLDGTMNIPKRQKLVDQF 646
Query: 579 NSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
N+ K+ VFL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+
Sbjct: 647 NNPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVY 706
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
R +S G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 707 RFISTGTIEEKIFQRQASKQALSSAVVDEKEDAERHF 743
>gi|410078704|ref|XP_003956933.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
gi|372463518|emb|CCF57798.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
Length = 1028
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 290/549 (52%), Gaps = 91/549 (16%)
Query: 126 IIQVPASINC-RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKD 183
+ + P+ + +L ++Q +G+ +L L+++K GIL D+MGLGKT+QTI+FL + + K
Sbjct: 120 VTESPSFVKSGKLRDYQIQGLNWLISLHEHKLSGILADEMGLGKTLQTISFLGYLRYVK- 178
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMILE 239
K+D G L+I P S + NW+ EF++W+ NV + HG R+++ +
Sbjct: 179 -----------KID--GPFLVIVPKSTLHNWKREFNKWTPEVNVCVLHGDKEARREIVHD 225
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ + L+TS++ S L ++ W+ +I+DEAHR+KNE+S L L +RNR+
Sbjct: 226 TILEAKFDALVTSYEMVIREKSDLRKIAWQYLIIDEAHRIKNEQSALSQIIRLLYSRNRL 285
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
+TGT +QN + EL+ L +++ P G E F E+++ Q + ++ + +
Sbjct: 286 LITGTPLQNNLHELWALLNFLLPDVFGDSEIFEEWFE------QNNSEEDQEVLV----- 334
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
Q L VL +LLRR K + L+ E N V+ M+D+Q + Y+ LL+ KD
Sbjct: 335 QQLHTVLNPFLLRRIKADVEKSLLPKIETN-VYVGMTDMQIQWYKSLLE---------KD 384
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEP 476
+ G+ + + E RL N+ +++L++ NH E +P P
Sbjct: 385 IDAVNGA-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTT 429
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D+ +F + GKM L+KL+ +KG ++L
Sbjct: 430 DEH--------LIF-----------------------NSGKMIILDKLLKRLKAKGSRLL 458
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGG 595
+FS R+LDILE + + Y + R+DGST R +D++N SK VFL++TRAGG
Sbjct: 459 IFSQMSRLLDILEDYCYFRDYEYCRIDGSTSHEERIEAIDEYNKPDSSKFVFLLTTRAGG 518
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NLV+A+ VV++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R
Sbjct: 519 LGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVYVYRFVTENAIEEKVIERAAQ 578
Query: 656 KQQLSNIAV 664
K +L + +
Sbjct: 579 KLRLDQLVI 587
>gi|336466447|gb|EGO54612.1| chromatin remodelling complex ATPase chain ISW1 [Neurospora
tetrasperma FGSC 2508]
gi|350286687|gb|EGZ67934.1| chromatin remodelling complex ATPase chain ISW1 [Neurospora
tetrasperma FGSC 2509]
Length = 1126
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 176 PAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 225
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ +D G L+I P S + NW+ EF++W+ NV + G + +I ++L
Sbjct: 226 ---RHIMDTSGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIQDRLVDEN 282
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 283 FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRVFNSRNRLLITGTP 342
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 343 LQNNLHELWALLNFLLPDVFGDSEAFDQWF-----SGQD--------RDQDTVVQQLHRV 389
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 390 LRPFLLRRVKSDVEKSLLPKKEVN-VYIGMSEMQVKWYQKILE---------KDIDAVNG 439
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 440 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 482
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 483 -----------------------------VYNAGKMLVLDKLLKRLQKQGSRVLIFSQMS 513
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R + +D++N S K VFL++TRAGGLG+NL
Sbjct: 514 RLLDILEDYCVFRQYKYCRIDGGTAHEDRIAAIDEYNKPDSDKFVFLLTTRAGGLGINLT 573
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V+++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 574 SADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 633
Query: 662 IAV 664
+ +
Sbjct: 634 LVI 636
>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 290/575 (50%), Gaps = 66/575 (11%)
Query: 113 FEPLVL--------SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYK------NKHGG 158
+PLVL D PI+ P + L HQREGV+F++ N G
Sbjct: 151 IDPLVLWHPEESEEQADNLMPIVVDPLLVRF-LRPHQREGVQFMFDCVSGLSSTANISGC 209
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
IL DDMGLGKT+Q+I L + + + + K +I+ P+S++ NWE E
Sbjct: 210 ILADDMGLGKTLQSITLLYTLLRQGFDGKAMVKK---------AIIVTPTSLVSNWEAEI 260
Query: 219 SRWSTFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEI 270
+W V + RD ++ +++ ++VLI S++++R+H S S + ++
Sbjct: 261 KKWVGERVQLVALCESTRDDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDL 320
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
+I DEAHRLKN+++ A L + R+ L+GT MQN + E + + ++ PG LG +
Sbjct: 321 LICDEAHRLKNDQTLTNRALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATY 380
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
FR +Y+ P+ G+ TA E ++ ER L + + +++LRRT HL K V
Sbjct: 381 FRRYYETPIICGREPTAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHL-PPKIVEV 439
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
V C +S LQ Y + ++ +IN+++ S
Sbjct: 440 VCCRLSPLQSELYNHFIHSKNVKKVINEEMKQS--------------------------K 473
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
+L + L+++ NH +LI + ++ E F P++ G + G+
Sbjct: 474 ILAYITALKKLCNHPKLIYDTVKSG-NQGTSGFEDCMRFFPPEM-FSGRSGAWTGGEGIW 531
Query: 511 DVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSN 569
V+ GKM L +L+ K D+I+L S + LD+ + + Y + RLDG+T N
Sbjct: 532 -VELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIN 590
Query: 570 LRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
RQ LV+ F S P K VFL+S++AGG GLNL+ NR+V+FDP+WNPA D QA R +R
Sbjct: 591 KRQKLVNRF-SDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWR 649
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
GQK+ V ++R LS G++EE V+ RQ+ K+ L +
Sbjct: 650 DGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKV 684
>gi|164426583|ref|XP_956548.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa
OR74A]
gi|157071396|gb|EAA27312.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa
OR74A]
Length = 1126
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 176 PAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 225
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ +D G L+I P S + NW+ EF++W+ NV + G + +I ++L
Sbjct: 226 ---RHIMDTPGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIQDRLVDEN 282
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 283 FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRVFNSRNRLLITGTP 342
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 343 LQNNLHELWALLNFLLPDVFGDSEAFDQWF-----SGQD--------RDQDTVVQQLHRV 389
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 390 LRPFLLRRVKSDVEKSLLPKKEVN-VYIGMSEMQVKWYQKILE---------KDIDAVNG 439
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 440 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 482
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 483 -----------------------------VYNAGKMLVLDKLLKRLQKQGSRVLIFSQMS 513
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R + +D++N S K VFL++TRAGGLG+NL
Sbjct: 514 RLLDILEDYCVFRQYKYCRIDGGTAHEDRIAAIDEYNKPDSDKFVFLLTTRAGGLGINLT 573
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V+++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 574 SADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 633
Query: 662 IAV 664
+ +
Sbjct: 634 LVI 636
>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
Length = 812
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 301/610 (49%), Gaps = 85/610 (13%)
Query: 109 HTGPFEPLVLSKDGEYPIIQVPASINCRLLE----HQREGVKFLYKLYKN-----KHGGI 159
H E L L+K + + +VP I+ RL + HQ EG+KF+Y+ G I
Sbjct: 191 HKSLAEILGLNKGDKDQVPKVPVVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAASGCI 250
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
+ D+MGLGKT+Q IA + + + E TI K +++CPSS++ NW E
Sbjct: 251 MADEMGLGKTLQCIALMWTLLKQSPEPGKPTIQK---------CVVVCPSSLVGNWASEL 301
Query: 219 SRW----STFNVSIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEV 266
+W + +I ++ + +L+ + VLI S++S R+H S L+ +
Sbjct: 302 VKWLGKDAINPFAIDGKVSKAELKAQLKQWAISSGRSVVRPVLIVSYESLRLHTSDLASI 361
Query: 267 NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLG 326
+++ DE HRLKN ++ Y A + L R+ L+GT +QN + E + L ++ P LG
Sbjct: 362 PIGLLLADEGHRLKNRDNQTYKALMTLNVDRRVILSGTPIQNDLSEYFALLNFANPNFLG 421
Query: 327 TREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGK 386
T FR+ Y+ P+ G+ E + DER L+ ++ K+++RRT + +L + K
Sbjct: 422 THNEFRKQYELPILRGRDADGSEDDRKKGDERLAELLQLVNKFIIRRTNDILSKYLPV-K 480
Query: 387 EDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSC 446
++VVFC +S Q Y + P+I+ ++ PL + K+L N
Sbjct: 481 YEHVVFCKLSPFQTDLYNYFITSPDIKSILRG----KGSQPLKAIGLLKKLCN------- 529
Query: 447 PFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESF 506
P L+ L + E + P+ D + +D E+
Sbjct: 530 -----HPDLLNLSEDLPGCESLYPDDYVPKDARGRDREVK-------------------- 564
Query: 507 IGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
V GKM L++++ + DKI+L S + LD+ EK +GY RLDG+
Sbjct: 565 -----VWYSGKMMVLDRMLARIQRETKDKIVLISNYTQTLDVFEKLCRSRGYGALRLDGT 619
Query: 566 TPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
+ R LV FN S++ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R
Sbjct: 620 MNGSKRTKLVAKFNDPDSEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALAR 679
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
+R GQK+ V+R ++ G++EE ++ RQ +KQ LS V +GV+D + G
Sbjct: 680 VWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTSVV---------DGVEDVERHFG 730
Query: 685 ELFGICNLFR 694
L G+ LFR
Sbjct: 731 -LDGLKQLFR 739
>gi|67466735|ref|XP_649509.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56465969|gb|EAL44123.1| helicase domain-containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449706136|gb|EMD46046.1| transcription regulatory protein SNF2, putative [Entamoeba
histolytica KU27]
Length = 759
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 282/543 (51%), Gaps = 81/543 (14%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV----FGKDESSDSTILK 192
L EHQR GVK++Y+L+K GGI+GD+MGLGKT+ +AFL + F K+++ T
Sbjct: 109 LFEHQRIGVKWMYELFKQHAGGIVGDEMGLGKTLMVLAFLEGLQCTFFNKEKTETLTC-- 166
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG----PNRDMILEKLEACGVE 247
G L++ P ++I +W E R+ + V I H N+D I L
Sbjct: 167 -------GNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTNKDNI-NLLNTTHNS 218
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+ +T+++ R H ILSE W +++DE H++KN +++ A L+ R+ L+G+ +Q
Sbjct: 219 LYLTTYEFIRTHKDILSEYLWFCIVLDEGHKIKNPNAEISKAVKMLEAHQRLLLSGSPIQ 278
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++LFD+V PG LGT F++ + +P+++G +A A + + L ++
Sbjct: 279 NNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSASYFQFMAALKCAKGLRDMIA 338
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+ LRR K+E + L +++ V+C ++ Q+ Y + I +I+ D
Sbjct: 339 PFFLRRIKKEVLPSLPT-RQEKFVYCPLTPKQRSMYLEYVNSSSIAKVIDGD-------- 389
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+D L D+ L++I NH LI P+ K++
Sbjct: 390 ---------MDMLAAIDT------------LRKICNHPHLINKTEDLTPETIYKES---- 424
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
K++ + L+ + +G K L+F + +ML+I
Sbjct: 425 ----------------------------SKLKYVCDLLKQFKKEGHKALIFCQTRQMLNI 456
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
+E+ ++ + + + R+DG SN R + FN+ P+ VF+++TR GGLG+NL A+RV+
Sbjct: 457 IEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVI 516
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
++DP+WNP D QA++R+ R GQ R VI++RL+ +G++EE +Y +Q+ K+ LS+ + +
Sbjct: 517 MYDPDWNPTVDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNE 576
Query: 668 LEK 670
EK
Sbjct: 577 EEK 579
>gi|341883705|gb|EGT39640.1| hypothetical protein CAEBREN_07872 [Caenorhabditis brenneri]
Length = 1092
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 289/576 (50%), Gaps = 87/576 (15%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKF++ HG I+ D+MGLGKT+Q I+ L + + + T+
Sbjct: 462 LRPHQREGVKFMWDCVTGVNIPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVS 521
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------ 243
K +I+CPSS+++NW+ E +W + + R+ I+ L
Sbjct: 522 KS---------IIVCPSSLVKNWDKEIKKWLGTRLSAMPVDSGKREQIIASLSESSVVLQ 572
Query: 244 ----------------CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
C + VLI S++++R++ +IL IVI DE HRLKN + Y
Sbjct: 573 NKLRFPASFMADSKMRCAIPVLIISYETFRLYANILHSGEVGIVICDEGHRLKNSDNLTY 632
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
A LK R+ ++GT +QN ++E ++L ++V PG LGT FR+ ++ + G+ A
Sbjct: 633 QALSGLKCVRRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADA 692
Query: 348 PERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL 407
+ +E+ + +V+++ K ++RRT +L + K ++++ C S LQ+ Y +L+
Sbjct: 693 SSEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPV-KYEHIICCKNSTLQETLYNKLI 751
Query: 408 QLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL 467
+ C++ + + D L + L+++ NH L
Sbjct: 752 E-------------------------CEKQNRIAEKDKGATASALSFITHLKKLCNHPYL 786
Query: 468 IKPNPRDEPDKQRKDAELAS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
+ + +PD + +D L++ F P +SF D GKM+ L+ ++
Sbjct: 787 VYEEFQ-KPDNRFRDKCLSAFPESFNP-----------KSF----DPSFSGKMKVLDYIL 830
Query: 526 -YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+ + DK +L S + +D +GY F RLDGS R +VD FN PS
Sbjct: 831 AVTRKTTDDKFVLVSNYTQTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFND-PSS 889
Query: 585 QVF--LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
+F L+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+
Sbjct: 890 SIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLAT 949
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYFEGVQ 677
GS+EE ++ RQ +K+ LS+ V +G+ R+F Q
Sbjct: 950 GSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSNEQ 985
>gi|405973253|gb|EKC37977.1| DNA excision repair protein ERCC-6-like protein [Crassostrea gigas]
Length = 1838
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 284/578 (49%), Gaps = 88/578 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L HQ++GV +++ L++ + GGILGDDMGLGKTIQ I+FL+ +F +
Sbjct: 577 LYAHQKQGVLWMWGLHQKRKGGILGDDMGLGKTIQVISFLSGLF--------------DM 622
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTF--------NVSIYHGPNRDM--ILEKLEACGV 246
+K VLI+ P SVI NWE EF +W F V YHG ++ L K+ G
Sbjct: 623 EKVHSVLIVMPVSVIGNWEKEFGKWYGFYDTGAPGIKVESYHGSKKEKERSLAKIRRKGG 682
Query: 247 EVLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
VL+TS+ ++S+ + W+ +I+DE H++KN +K ++ +RI L
Sbjct: 683 -VLLTSYGLVVTSWEMMSQQDGRPFRWDYLILDEGHKIKN-PTKTTKGVHQIPAGHRILL 740
Query: 302 TGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + E+++LFD+V G+ LGT F+ Y+ P+ + A R+ E +
Sbjct: 741 TGTPIQNNLREMWSLFDFVHQGTLLGTARTFKMEYENPITRARERDATANERRLGMEMAE 800
Query: 361 HLVAVLRKYLLRRTKEETIGH------------------LMMGKEDNVVFCTMSDLQKRA 402
L ++ Y LRRTK E + M K D +++ ++ Q+R
Sbjct: 801 SLKQIISPYFLRRTKAEVTDNEAREGQNSSSSTRTLKMPTMTRKNDFIIWLFLTPDQQRI 860
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
Y L L + K+L + SPL + K++ CD P L +L
Sbjct: 861 YGDFLSLDTV-----KELLMTKKSPLVALTVLKKI-----CDH-PRLLSRRACAQLGLDG 909
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD---VKSCGKMR 519
H D+ L S G + D ++ GK+
Sbjct: 910 EH--------------GLNDSALESE--------EGYQCAANQIKNMPDNVLIQESGKLI 947
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSLVDDF 578
+ L+ G + L+FS S +MLDI+ + + +G+ RLDG+ T + R + F
Sbjct: 948 VIMDLLDQMKRDGHRCLVFSQSRKMLDIIHQLITNRGHKVMRLDGTITQLSERDKRIATF 1007
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
S VFL++T+ GG+GL L +A+RV+I+DP+WNPA D QA DR FR GQ ++V+++R
Sbjct: 1008 QEDMSYSVFLLTTQVGGVGLTLTAADRVIIYDPSWNPATDAQAVDRVFRIGQDKNVVIYR 1067
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGV 676
L++ G++EE +Y RQ++K ++ +G + Y G+
Sbjct: 1068 LITCGTVEEKIYRRQIFKDSITR-QTTGNTKNPYRSGI 1104
>gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 912
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 237/427 (55%), Gaps = 60/427 (14%)
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
VL+T++ + RIH IL V W ++DE H+++N S++ MAC KT +RI L+GT +Q
Sbjct: 395 VLVTTYAAIRIHADILLPVKWAYCVLDEGHKIRNPDSEVTMACKRFKTPHRIILSGTPIQ 454
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N ++EL++++D+V PG LGT F+ + P+ G A ++ A + L ++
Sbjct: 455 NNLIELWSIYDFVFPGRLGTLPVFQTQFATPINLGGYANANNVQVQTAYKCACILRDMIS 514
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
YLLRR K + L K + V+FC +SD Q+R Y + L E++ ++ L
Sbjct: 515 PYLLRRMKSDVATDLPK-KSEQVLFCRLSDAQRREYEKFLSSKELKGILEGKLR------ 567
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+L + L++I NH +L++ N D S
Sbjct: 568 -----------------------ILAGIDVLRKICNHPDLLERNNAD-----------FS 593
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
A +G V GKM ++ L+ W +G ++LLF + +MLDI
Sbjct: 594 ANYGA-------------------VSRSGKMIVVKALLQMWKRQGHRVLLFCQTRQMLDI 634
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
LE F+ +GY++ R+DGST R +VD +N S VFL++T+ GGLG+NL SANRV+
Sbjct: 635 LELFIKNEGYAYLRMDGSTSIQQRSKIVDCYNEDESYFVFLLTTKVGGLGINLTSANRVI 694
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
IFDP+WNP+ D+QA++R++R GQK+ V ++RL+++G++EE +Y RQ++KQ L+N +
Sbjct: 695 IFDPDWNPSTDMQARERAWRLGQKKSVTIYRLMTSGTIEEKIYHRQIFKQFLTNKILKDP 754
Query: 668 LEKRYFE 674
++R+F+
Sbjct: 755 RQRRFFK 761
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 15/120 (12%)
Query: 113 FEP-LVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
FEP LV + + VP + L +QR VK+L++LY + GG++GD+MGLGKTIQ
Sbjct: 220 FEPSLVYEDEVIHKGYCVPGDVYRHLFPYQRTCVKWLWELYCQEVGGLVGDEMGLGKTIQ 279
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSR-WSTFNVSIYH 230
I+FLA + S +L KG V+I+CP++V++ W EF + W F V+I H
Sbjct: 280 IISFLAGL------GFSRLL-------KGPVIIVCPATVLRQWVQEFHKWWPPFRVAILH 326
>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
Length = 797
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 292/574 (50%), Gaps = 82/574 (14%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + N +G I+ D+MGLGKT+Q I L
Sbjct: 191 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWT 250
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + E+ T+ K V+I CP++++ NW E +W N + G +
Sbjct: 251 LLKQSPEAGKPTVQK---------VVIACPATLVGNWANELVKWLGKDAVNPFVIDGKAS 301
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ + +L + VLI S+++ R++ L E +++ DE HRLKN +S+
Sbjct: 302 KAELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQ 361
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ L+GT +QN + E Y+L ++ PG LG+R F + ++ P+ G+
Sbjct: 362 TFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDA 421
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E + DE L+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y
Sbjct: 422 DGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPV-KYEHVVFCNLAPFQMDLYNH 480
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q P+I+ L L G S P L + L+++ NH
Sbjct: 481 FIQSPDIKSL------------------------LRGKGSQP----LKAIGILKKLCNH- 511
Query: 466 ELIKPNPRDEPDKQRKDAEL-ASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALE 522
PD A+L S F PD D V + DVKS GKM L+
Sbjct: 512 ----------PDLLNLSADLPGSEQFFPD-DYVPPEGRGRD----RDVKSWYSGKMMVLD 556
Query: 523 KLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS 581
+++ DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN
Sbjct: 557 RMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDP 616
Query: 582 PSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
++ VFL+S++AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQK+ V+R +
Sbjct: 617 DGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFI 676
Query: 641 SAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+ GS+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 677 ATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERHF 710
>gi|347829336|emb|CCD45033.1| similar to chromatin remodelling complex ATPase chain ISW1
[Botryotinia fuckeliana]
Length = 1130
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 276/543 (50%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PGFIQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ +D G LI+ P S + NW+ EF RW+ NV + G + +I E+L
Sbjct: 229 ---RHIMDITGPHLIVVPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNLINERLIDEK 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ+ D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDAEAFDQWFS-----GQQ--------EDQDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MSD+Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKADVEKSLLPKKEVN-LYIGMSDMQVKWYKKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 484
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF + GKM L+KL+ G ++L+FS
Sbjct: 485 -----LVF-----------------------NAGKMVMLDKLLTRMKKAGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R +DD+N S++ VFL++TRAGGLG+NL
Sbjct: 517 RLLDILEDYCVFREYKYCRIDGGTAHEDRIQAIDDYNKPDSEKFVFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 577 SADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQ 636
Query: 662 IAV 664
+ +
Sbjct: 637 LVI 639
>gi|302783170|ref|XP_002973358.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
gi|300159111|gb|EFJ25732.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii]
Length = 710
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 299/581 (51%), Gaps = 79/581 (13%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P ++ L EHQ EG+++L++L+ + GGILGDDMGLGKT+Q AFL +F
Sbjct: 3 LPGNVASVLYEHQHEGLRWLWRLHLQRRGGILGDDMGLGKTMQIAAFLCGLF-------- 54
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF-NVSIYHGPN---RDMILEKLEAC 244
+K+ K+ LI+ P ++I +W E + V Y G + R+ L+++
Sbjct: 55 ----HSKLIKRA--LIVAPKTLIPHWGKELNVVGLGRKVKDYSGTSISVRESNLDRILQV 108
Query: 245 GVEVLITSFDSYRIHGSIL--------SEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
G VL+T++D R + + L +V W+ VI+DE H +KN ++ + E+ +
Sbjct: 109 G-GVLLTTYDIVRHNTNALKGEYNFDDDDVTWDYVILDEGHLIKNPSTQRAKSLKEIPSA 167
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
+RI ++GT +QN + E++ LFD+ P LG R+ F+ Y+ + G A +R RI
Sbjct: 168 HRIIISGTPIQNNLREMWALFDFCYPELLGDRKEFKAKYETMILSGNDKNATDRQKRIGA 227
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHL------MMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
Q L Y LRR K++ + + K D +V+ +S Q++ Y L+
Sbjct: 228 AVAQELQDRFAPYFLRRLKKDVFPNTGEETQQLAKKNDIIVWLRLSQRQRQMYTAFLRSE 287
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
Q + + GS L + K++ CD P L
Sbjct: 288 TAQGSLAG---SAKGSALAALTILKKI-----CDH-PLLLT------------------- 319
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK--------SCGKMRALE 522
K+ D + + D+ A +S GL++ + SC K+ L
Sbjct: 320 -------KRATDDVVEGLEYLDSTDIAAAEAMRKSLAGLAEPEPDSDGNKHSC-KIVFLM 371
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
L+ + +G + L+F+ +++MLDI+++ + ++ YSF R+DG T + RQ +V+DF +
Sbjct: 372 ALLENLVQEGHRTLVFAQTLKMLDIIQEEITKRRYSFCRIDGKTKGSERQRIVEDFQTDG 431
Query: 583 -SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
+ +FL++++ GGLGL L +A+RVVI DP WNP++D Q+ DR++R GQ R VIV+RL++
Sbjct: 432 CTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWNPSKDNQSVDRAYRIGQLRDVIVYRLMT 491
Query: 642 AGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
+G+LEE +Y +QV+K L +A + RYF QD +E
Sbjct: 492 SGTLEEKIYRKQVFKGGLMKVATERAEQFRYFSQ-QDFREL 531
>gi|448115947|ref|XP_004202943.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
gi|359383811|emb|CCE79727.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
Length = 1023
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 290/560 (51%), Gaps = 90/560 (16%)
Query: 117 VLSKDGEYPII----QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQT 172
+L+ + + P+I + P IN L +Q +G+ +L LY+N GIL D+MGLGKT+QT
Sbjct: 123 LLNDEEDVPVITEFTESPGFINGELRSYQIQGLNWLISLYENNLSGILADEMGLGKTLQT 182
Query: 173 IAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHG 231
I+FL + +++ G +II P S + NW EF+RW++ NV + G
Sbjct: 183 ISFLGYL---------RYIRN----IHGPHIIIVPKSTLDNWAREFARWTSDVNVLVLQG 229
Query: 232 PNR---DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
D++ +L C +V+ITS++ + + WE +I+DEAHR+KNE+S L
Sbjct: 230 DKETRADIVNNRLLTCDFDVVITSYEIVIKEKAAFRKFAWEYIIIDEAHRIKNEESLLSQ 289
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
++NR+ +TGT +QN + EL+ L +++ P G + F ++ + +
Sbjct: 290 IIRVFHSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDSWF--------KGSGT 341
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
E +DE L VL+ +LLRR K + L+ KE N V+ MSD+QKR Y+++L+
Sbjct: 342 EEEGN-SDEIISQLHKVLKPFLLRRVKSDVEKSLLPKKELN-VYLKMSDMQKRWYQKILE 399
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---L 465
KD+ G+ + E RL N+ +++L++ NH
Sbjct: 400 ---------KDIDAVNGAN-GKKESKTRLLNI--------------VMQLRKCCNHPYLF 435
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E +P P F D LV N+Q KM L+KL+
Sbjct: 436 EGAEPGP----------------PFTTDEHLV-FNSQ--------------KMIILDKLL 464
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-K 584
+ +G ++L+FS RMLDILE + + + Y + R+DG T R + +D++N S K
Sbjct: 465 KKFKEEGSRVLIFSQMSRMLDILEDYCMFRDYGYCRIDGQTDHADRVNSIDEYNKPGSDK 524
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
VFL++TRAGGLG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFRL++ +
Sbjct: 525 FVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRLVTENA 584
Query: 645 LEELVYTRQVYKQQLSNIAV 664
+EE + R K +L + +
Sbjct: 585 IEEKILERASQKLRLDQLVI 604
>gi|444318089|ref|XP_004179702.1| hypothetical protein TBLA_0C03810 [Tetrapisispora blattae CBS 6284]
gi|387512743|emb|CCH60183.1| hypothetical protein TBLA_0C03810 [Tetrapisispora blattae CBS 6284]
Length = 1069
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 278/548 (50%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + P I+ L +Q +GV +L L+KN GIL D+MGLGKT+QTI FL +
Sbjct: 123 EFQFRESPGYIDGLLRSYQIQGVNWLISLHKNGLAGILADEMGLGKTLQTITFLGYL--- 179
Query: 183 DESSDSTILKDNKVDKK-GYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMI 237
V+KK G L+I P S + NW E ++W+ N I G ++I
Sbjct: 180 -----------RYVEKKPGPFLVIAPKSTLNNWLREINKWTPDVNAFILQGDKVERSELI 228
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
KL C E+++ S++ + +++WE +++DEAHR+KNE+S L E +RN
Sbjct: 229 KTKLLECDFEIVVASYEIIIREKAAFRKIDWEYIVIDEAHRIKNEESMLSQVLREFSSRN 288
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + E F ++ + D+
Sbjct: 289 RLLITGTPLQNNLHELWALLNFLLPDIFSSSEDFDSWFSSNESEEDQ-----------DK 337
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS++QK+ Y+++L+
Sbjct: 338 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSNMQKKWYKQILE--------- 387
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS + E RL N+ +++L++ NH L
Sbjct: 388 KDLDAVNGSNGNK-ESKTRLLNI--------------VMQLRKCCNHPYLF--------- 423
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV +A K+ L+KL+ +G ++L+
Sbjct: 424 ----DGAEPGPPYTTDEHLVYNSA---------------KLNVLDKLLEKVKEEGSRVLI 464
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGL 596
FS R+LDI+E + +GY + R+DG T R + +D++N+ SK +FL++TRAGGL
Sbjct: 465 FSQMSRVLDIMEDYCYFRGYEYCRIDGQTAHEDRIAAIDEYNAPDSSKFIFLLTTRAGGL 524
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ VV+FD +WNP DLQA DR+ R GQK+ V V+R ++ S+EE + R K
Sbjct: 525 GINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTDNSVEEKILERATQK 584
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 585 LKLDQLVI 592
>gi|344231498|gb|EGV63380.1| hypothetical protein CANTEDRAFT_106017 [Candida tenuis ATCC 10573]
Length = 1018
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 287/563 (50%), Gaps = 99/563 (17%)
Query: 117 VLSKDGEYPII----QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQT 172
+L+ + E P I + PA ++ L +Q +G+ +L LY+N GIL D+MGLGKT+QT
Sbjct: 115 LLNDEIETPAITEFTESPAYVHGTLRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQT 174
Query: 173 IAFLAAV-FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYH 230
I+FL + + K + G +II P S + NW EF+RW+ V +
Sbjct: 175 ISFLGYLRYFKGIN--------------GPHIIITPKSTLDNWAREFARWTPDVRVLVLQ 220
Query: 231 GPN---RDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY 287
G +I ++L C +V+I+S++ S L WE +I+DEAHR+KNE+S L
Sbjct: 221 GDKDQRNQLINQRLMTCDFDVVISSYEIVIREKSALKRFKWEYIIIDEAHRIKNEESLLS 280
Query: 288 MACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTA 347
+ NR+ +TGT +QN + EL+ L +++ P G E F ++ + GQ
Sbjct: 281 QIIRMFHSNNRLLITGTPLQNNLHELWALLNFILPDVFGDSEAFDSWFQD--NEGQ---- 334
Query: 348 PERFIRIADERK--QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
DE Q L VL+ +LLRR K E + ++ KE+ V+ M+D+QK+ Y++
Sbjct: 335 --------DENSVVQQLHKVLKPFLLRRIKSE-VEKSLLPKEELNVYVKMTDMQKKWYQK 385
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH- 464
+L+ KD+ G+ + E RL N+ +++L++ NH
Sbjct: 386 ILE---------KDIDAVNGAS-GKKESKTRLLNI--------------VMQLRKCCNHP 421
Query: 465 --LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
E +P P D+ VF NAQ KM L+
Sbjct: 422 YLFEGAEPGPPYTTDEH--------LVF---------NAQ--------------KMIILD 450
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-S 581
KL+ + +G ++L+FS RMLDILE +L+ + Y + R+DG T R + +DD+N
Sbjct: 451 KLLKKFKQEGSRVLIFSQMSRMLDILEDYLLFREYEYCRIDGQTDHADRVNSIDDYNKPG 510
Query: 582 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
SK FL++TRAGGLG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFR ++
Sbjct: 511 SSKFAFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFIT 570
Query: 642 AGSLEELVYTRQVYKQQLSNIAV 664
++EE V R K +L + +
Sbjct: 571 EHAIEEKVIERAAQKLRLDQLVI 593
>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
Length = 805
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 216/686 (31%), Positives = 336/686 (48%), Gaps = 98/686 (14%)
Query: 22 FSQSSSVSQESSNDTLIIPRR-PPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKS 80
F +S SV ++ + T P R PP L Q G + + P +P E A V
Sbjct: 101 FRKSFSVPLKNKDSTAYNPNRAPPTLGLRQ-----GAVF-VAKPLHDPSG--EFAIVLYD 152
Query: 81 NVFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASIN 134
DD+ K+ + E + + + + D H E L + K D E+P +VP I+
Sbjct: 153 PTIDDKPKDMPKAIEP-TKAETPEEKLDAPLVHKSLAEILGIKKKTDDEHP--RVPVVID 209
Query: 135 CRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-E 184
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I+ + + + +
Sbjct: 210 PRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQCISLMWTLLKQSPD 269
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV----SIYHGPNRDMILEK 240
+ STI K +++CP+S+++NW E ++W N +I ++D + +
Sbjct: 270 AGKSTIQK---------AIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKDELTRQ 320
Query: 241 L----EACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
L A G V +I S+++ R++ L ++ DE HRLKN S + A
Sbjct: 321 LRQWAHATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNTFNALNS 380
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
L R+ LTGT +QN + E ++L + P LGTR FR+ Y+ P+ G+ A E
Sbjct: 381 LNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEADR 440
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEI 412
+ DE L+ V+ K+L+RRT + +L + K ++VVFC ++ Q Y ++ PEI
Sbjct: 441 KKGDECTAALLGVVNKFLIRRTNDILSKYLPV-KYEHVVFCNLAPFQFDLYNYFIKSPEI 499
Query: 413 QCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNP 472
Q L L G S P L + L+++ NH +L+
Sbjct: 500 QAL------------------------LRGKGSQP----LKAINILKKLCNHPDLL---- 527
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-A 529
D S PD D V A+ +VKS GKM L++++
Sbjct: 528 ------NMSDDLPGSEKCYPD-DYVPKEARGRD----REVKSWYSGKMAVLDRMLARIRQ 576
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFL 588
DKI+L S LD+ EK + Y RLDG+ N RQ LVD FN + +FL
Sbjct: 577 DTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFNDPEGDEFIFL 636
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE
Sbjct: 637 LSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEK 696
Query: 649 VYTRQVYKQQLSNIAV-SGKLEKRYF 673
++ RQ +KQ LS+ V S + +R+F
Sbjct: 697 IFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1088
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 283/553 (51%), Gaps = 81/553 (14%)
Query: 126 IIQVPASIN-CRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
I + P+ + +L E+Q EG+ +L L +N+ GIL D+MGLGKT+QTI+FL +
Sbjct: 146 ITESPSYVKEGKLREYQIEGLNWLISLNENRLSGILADEMGLGKTLQTISFLGYL----- 200
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEK 240
+K VD G +II P S + NW EFS+W+ V + G D+I +
Sbjct: 201 ----RYIK--HVD--GPFIIIVPKSTLDNWRREFSKWTPDVKVVVLQGDKEQRNDIIQNQ 252
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
L +VLITSF+ S L + WE ++VDEAHR+KNE+S L +RNR+
Sbjct: 253 LYTAQFDVLITSFEMVLREKSALKKFRWEYIVVDEAHRIKNEQSSLSQIIRLFYSRNRLL 312
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F E +D ++G + D+ Q
Sbjct: 313 ITGTPLQNNLHELWALLNFLLPDVFGDSEQFDETFDR--QNGNSELDEKAKQEEQDKVIQ 370
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L +L +LLRR K + L+ E N V+ M+D+Q Y++LL+ KD+
Sbjct: 371 ELHQLLSPFLLRRVKADVEKSLLPKIESN-VYTRMTDMQLEWYKKLLE---------KDI 420
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPD 477
G + + E RL N+ +++L++ NH L +P P D
Sbjct: 421 DAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGPPYTTD 465
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ D + GKM L+K++ + +G ++L+
Sbjct: 466 EHLID-------------------------------NSGKMIILDKMLKKFQKEGSRVLI 494
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +D++N+ S K VFL++TRAGGL
Sbjct: 495 FSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSAKFVFLLTTRAGGL 554
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ V+++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K
Sbjct: 555 GINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQK 614
Query: 657 QQLSNIAV-SGKL 668
+L + + G+L
Sbjct: 615 LRLDQLVIQQGRL 627
>gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
Length = 687
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 287/562 (51%), Gaps = 57/562 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKH-----GGILGDDMGLGKTIQTIAFLAAVFG 181
+ V I+ RL HQR+GV FLY+ G IL D+MGLGK++Q IA + ++
Sbjct: 129 VVVDPYISRRLRPHQRDGVIFLYECVMGMRDFSGFGAILADEMGLGKSLQCIALIWTLYK 188
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEK 240
+ +K +L++ P S++QNW EF +W ++ + + E
Sbjct: 189 QGMYGGKAPIKR--------ILLVTPGSLVQNWSREFRKWLGIERFKVFPVSSDKRVEEF 240
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
++ ++I S++ + L + ++++I DE HRLKN +K + ++TR R+
Sbjct: 241 IKYPQYPLMIISYEMFVRSCDTLKGIKFDLLICDEGHRLKNSSNKTFALISSVQTRRRVL 300
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + E Y + ++ PG LG+ FR Y++P+ + ++ + + R
Sbjct: 301 VTGTPIQNDLQEFYAIVEFCNPGILGSEAAFRRIYEDPIAKSRLPGCNKKEKNLGESRAI 360
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + + + LRRT+E I HL K + V+FC + LQ YR LL
Sbjct: 361 ELSRLTKLFCLRRTQEVIIHHLP-PKVEYVIFCRTAPLQVLIYRHLL------------- 406
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S L + EC +++ +C C+ L+++ N LI +D +
Sbjct: 407 ----SSRLFK-ECISAVES-------NYCRHFMCINALRKVCNEPNLIYEAVKDA-ESHL 453
Query: 481 KDAELASAVFGPDIDLVGG-------NAQNESFIGLSDVKSCGKMRALEKLMYSWA---S 530
D E+ ++ L G N ++F + GK+ L L+ W S
Sbjct: 454 IDDEIGKSIEEEHTLLYAGIQSLYPPNYSPDTF----TTEHSGKLAVLSNLL-DWIYQNS 508
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
+K+++ S R LD+L+K K Y + RLDGSTP++ R ++V++FNSS SK VFL+
Sbjct: 509 PKEKVVVVSNFTRTLDVLQKMCKSKNYRYVRLDGSTPTSKRHTIVENFNSSYSKTFVFLL 568
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ A+R+V++D +WNPA DLQA R +R GQKR V ++RL++ G++EE +
Sbjct: 569 SSKAGGTGLNLIGASRLVLYDIDWNPANDLQAMARIWRDGQKRDVYIYRLVTTGTIEEKI 628
Query: 650 YTRQVYKQQLSNIAVSGKLEKR 671
+ RQV K LS + + R
Sbjct: 629 FQRQVMKHDLSGAVMDTRESGR 650
>gi|366993054|ref|XP_003676292.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
gi|342302158|emb|CCC69931.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
Length = 1025
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 285/569 (50%), Gaps = 91/569 (15%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
Y + P I+ L +Q +G+ +L L+KN GIL D+MGLGKT+QTIAFL + +
Sbjct: 100 YQFRESPKYIHGTLRPYQIQGLNWLVSLHKNGLAGILADEMGLGKTLQTIAFLGYLKYME 159
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILE 239
+ G L+I P S + NW E ++W+ + G ++ +I E
Sbjct: 160 GIN-------------GPFLVIAPKSTLNNWLREINKWTPDVKAFVLQGDKQERASLIKE 206
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
KL C ++++ S++ + + NWE +I+DEAHR+KNE+S L E +RNR+
Sbjct: 207 KLMTCDFDIVVASYEIIIREKAAFKKFNWEYIIIDEAHRIKNEESLLSQVLREFTSRNRL 266
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
+TGT +QN + EL+ L +++ P + + F +++ + E D+
Sbjct: 267 LITGTPLQNNLHELWALLNFLLPDIFSSSQDFDDWF-----------SSETTEEDQDKVV 315
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
+ L VL+ +LLRR K + L+ KE N ++ MS++QK+ Y+++L+ KD
Sbjct: 316 KQLHTVLQPFLLRRIKNDVETSLLPKKELN-LYVGMSNMQKKWYKKILE---------KD 365
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEP 476
L G ++ E RL N+ +++L++ NH L +P P
Sbjct: 366 LDAVNGENSSK-ESKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGPPYTT 410
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D+ V + K++ L+KL+ G ++L
Sbjct: 411 DEHL-------------------------------VYNSKKLQVLDKLLKKMKEDGSRVL 439
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGG 595
+FS R+LDILE + +GY + R+DGST R +DD+N+ S K +FL++TRAGG
Sbjct: 440 IFSQMSRVLDILEDYCFFRGYKYCRIDGSTDHEDRIKSIDDYNAPDSDKFIFLLTTRAGG 499
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ S+EE + R
Sbjct: 500 LGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKILERATQ 559
Query: 656 KQQLSNIAV---SGKLEKRYFEGVQDCKE 681
K +L + + + K E +D K+
Sbjct: 560 KLRLDQLVIQQNKASMNKNKKESKKDAKD 588
>gi|431917856|gb|ELK17087.1| DNA repair and recombination protein RAD54B [Pteropus alecto]
Length = 910
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 285/562 (50%), Gaps = 50/562 (8%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + L HQ+EG+ FLY+ ++ G IL D+MGLGKT+Q I+ +
Sbjct: 281 FPVVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNSRCGAILADEMGLGKTLQCISLI 340
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW+ EF +W + + IY
Sbjct: 341 WTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIYTVDQDH 392
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E +++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 393 KVEEFIKSPFYSVLIISYEMLLRSLDQIKHIKFDLLICDEGHRLKNSTIKTTTALISLSC 452
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI LTGT +QN + E + L D+V PG LG+ +R+ Y+EP+ ++ +A E +
Sbjct: 453 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIISRQPSASEEEKELG 512
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + + LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 513 ERRAAELTCLTGLFFLRRT-QEVINKYLPPKIENVVFCQPGALQIELYRKLLNSQAVRFC 571
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L ++ P L C+ L+++ NH L+ + +++
Sbjct: 572 LEGLL-----------------------ENSPH---LICIGALKKLCNHPCLLFNSVKEK 605
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D +++ I++ + F K GK++ L KL+ +
Sbjct: 606 ECSSTWDENEEKSLYEGLINVFPADYNPLLFTE----KESGKLQVLTKLLAVIHELRPTE 661
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 662 KVVLVSNYTQTLNILQEICKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSK 721
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 722 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 781
Query: 653 QVYKQQLSNIAVSGKLEKRYFE 674
Q+ KQ LS V Y +
Sbjct: 782 QISKQGLSGAVVDLTRTSEYMQ 803
>gi|328699200|ref|XP_001946170.2| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1051
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 272/544 (50%), Gaps = 92/544 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L +
Sbjct: 157 NGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM-------------K 203
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVL 249
+ + G ++I P S +QNW EF +W ++ +RD I E +V
Sbjct: 204 HYRNIPGPHMVIVPKSTLQNWVNEFKKWCPTIRTVCMIGDRDTRVKFIRETFIPGDWDVC 263
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
ITS++ ++L ++ W +++DEAHR+KNEKSKL E +T NR+ LTGT +QN
Sbjct: 264 ITSYEMIICERAVLRKIQWRYLVIDEAHRIKNEKSKLSEIIREFETTNRLLLTGTPLQNN 323
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL+ L +++ P + + F ++++ G + L AVLR +
Sbjct: 324 LHELWALLNFLLPDVFNSSDDFDQWFNTNNCFGDNALI------------ERLHAVLRPF 371
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LLRR K E L KE V + +S LQ+ Y ++L
Sbjct: 372 LLRRLKAEVEKRLKPKKEVKV-YVGLSKLQREWYTKVL---------------------- 408
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL---IKPNPRDEPDKQRKDAELA 486
K +D ++G + L++L++ SNH L ++P P D+
Sbjct: 409 ----MKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGVEPGPPYTTDEH------- 457
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF +CGKM +KL+ + + ++L+FS RM+D
Sbjct: 458 -IVF-----------------------NCGKMVVFDKLLKALKEQDSRVLVFSQMTRMMD 493
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
ILE ++ KGY++ RLDG TP RQ ++++N SK+ VF++STR+GGLG+NL +A+
Sbjct: 494 ILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILSTRSGGLGINLATADV 553
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L + +
Sbjct: 554 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQ 613
Query: 665 SGKL 668
G+L
Sbjct: 614 QGRL 617
>gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
Length = 1108
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 277/541 (51%), Gaps = 84/541 (15%)
Query: 130 PASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
PA + ++ ++Q +G+ ++ LY N GIL D+MGLGKT+QTI+FL
Sbjct: 215 PAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLG----------- 263
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MILEKLEAC 244
L+D + + G+ L++ P S + NW EF RW FNV G + +I + L
Sbjct: 264 -YLRDFR-ETPGFHLVVVPKSTLDNWYREFHRWVPGFNVVTLKGSKEEREKVIQDHLLPQ 321
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+VLIT+++ S L +++WE +++DEAHR+KN S L +R+R+ +TGT
Sbjct: 322 DFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSRLLITGT 381
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN +MEL++L +++ P E F ++ Q D+ Q L
Sbjct: 382 PLQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQ------------DQVVQQLHK 429
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VLR +LLRR K + L+ KE N +F ++++Q++ Y+ +L+ KD+
Sbjct: 430 VLRPFLLRRVKADVEKSLLPKKEIN-IFVGLTEMQRKWYKSILE---------KDIDAVN 479
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G + + E RL N+ +++L++ NH L D
Sbjct: 480 GG-VGKKEGKTRLLNI--------------VMQLRKCCNHPYLF-------------DGA 511
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
F D L V + GKM L++L++ KG ++L+FS RM
Sbjct: 512 EPGPPFTTDEHL---------------VDNSGKMVILDRLLHKMKQKGSRVLIFSQMSRM 556
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
LDILE + + + Y + R+DG T + R + +D++N S++ VFL++TRAGGLG+NL +A
Sbjct: 557 LDILEDYCLFREYKYCRIDGGTAHDDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTA 616
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VV+FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE + R K +L +
Sbjct: 617 DIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKLRLDQLV 676
Query: 664 V 664
+
Sbjct: 677 I 677
>gi|296472015|tpg|DAA14130.1| TPA: excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Bos taurus]
Length = 1006
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 249/474 (52%), Gaps = 60/474 (12%)
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
+LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI L+G+ MQ
Sbjct: 88 ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQ 147
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++LFD++ PG LGT F E + P+ G A ++ A + L +
Sbjct: 148 NNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTIN 207
Query: 368 KYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N ++ G
Sbjct: 208 PYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSG- 266
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
LV L++I NH +L P++ K D EL
Sbjct: 267 ----------------------------LVALRKICNHPDLFSGGPKNL--KGIPDEELG 296
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
FG K GKM +E L+ W +G ++LLFS S +MLD
Sbjct: 297 EDQFG-------------------YWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLD 337
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRV 606
ILE FL + YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+NL ANRV
Sbjct: 338 ILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRV 397
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
+I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+N +
Sbjct: 398 IIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKD 457
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFR-DLSDNLFTSEIIESHEEQGQQQERH 719
++R+F+ +L+ + L D S + TS I Q +RH
Sbjct: 458 PKQRRFFKS--------NDLYELFTLSSPDTSQSTETSAIFAGTGSDVQTPKRH 503
>gi|388582967|gb|EIM23270.1| hypothetical protein WALSEDRAFT_59530 [Wallemia sebi CBS 633.66]
Length = 1443
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 282/549 (51%), Gaps = 71/549 (12%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
I +L E+Q +G++++ LY N+ GIL D+MGLGKTIQTI+ + T L
Sbjct: 499 IGGQLKEYQLKGLQWMISLYNNRLNGILADEMGLGKTIQTISLV------------TFLI 546
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
+ K + G LII P S + NW +EF +W+ + +V++Y GP R +++ G +VL
Sbjct: 547 ERK-RQNGPYLIIVPLSTLTNWAMEFEKWAPSVSVAVYKGPPQQRKATQQRMRQ-GFQVL 604
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+F+ +LS+ NW +I+DE HRLKN +SKL + KTR R+ LTGT +QN
Sbjct: 605 LTTFEYVIKDRPVLSKYNWVFMIMDEGHRLKNTESKLSQTLQQFYKTRYRLILTGTPLQN 664
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK----QHLVA 364
+ EL+ L ++V P + + F E+++ P + T + + +E + L
Sbjct: 665 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFAN----TGSNEKMDLNEEESLLVIKRLHK 720
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VLR +LLRR K++ + + K + VV C MS LQ Y ++ + ++ + D +
Sbjct: 721 VLRPFLLRRLKKD-VEKDLPDKVEKVVKCRMSPLQISLYNQMKKFGQMASISQSDKNGAV 779
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G K L N +++L++I NH
Sbjct: 780 GG--NNKSGIKGLQN--------------TIMQLRKIVNH-------------------- 803
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
VF D + S + GK L++++ + G ++L+F +
Sbjct: 804 --PFVF----DAIESAVNPASISDDKLYRVAGKFELLDRILPKLKATGHRVLIFFQMTAI 857
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
+ I+E +L KG RLDGST + R SL++ FN S VFL+STRAGGLGLNL SA
Sbjct: 858 MTIMEDYLAWKGLKHLRLDGSTKTEERSSLLNKFNDLDSDYFVFLLSTRAGGLGLNLQSA 917
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ V+IFD +WNP DLQAQDR+ R GQK+ V + RL++ S+EE + R YK ++
Sbjct: 918 DTVIIFDSDWNPHADLQAQDRAHRIGQKKEVRILRLITERSVEEQILARAQYKLEIDGKV 977
Query: 664 V-SGKLEKR 671
+ +GK + +
Sbjct: 978 IQAGKFDNK 986
>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
Length = 857
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 297/578 (51%), Gaps = 77/578 (13%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
+GE+P +VP I+ RL + HQ EGVKF+YK + + +G I+ D+MGLGKT+Q
Sbjct: 249 EGEHP--KVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQ 306
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
IA L + + E+ S I K +++CPSS+++NW E +W +
Sbjct: 307 CIALLWTLLKQSPEAGKSAIQK---------AIVVCPSSLVKNWANELVKWLGADAVTPF 357
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L + V+I S+++ R++ L +++ DE HR
Sbjct: 358 AIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHR 417
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S+ + + L RI L+GT +QN + E ++L + P LGTR FR+ ++ P
Sbjct: 418 LKNGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELP 477
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L+ ++ K+++RRT + +L + K ++VVFC ++
Sbjct: 478 ILRGRDADADEVDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 536
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y L P+IQ L L G S P L + L
Sbjct: 537 QLDLYNYFLTSPDIQAL------------------------LRGKGSQP----LKAINIL 568
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+++ NH +L+ N D S PD D V +A+ + S GKM
Sbjct: 569 KKLCNHPDLLNLN----------DDLPGSENCWPD-DYVPKDARGHRNREVKPWYS-GKM 616
Query: 519 RALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L++++ DKI+L S + LDI E+ + Y RLDG+ N RQ LVD
Sbjct: 617 QVLDRMLARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDK 676
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN ++ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V
Sbjct: 677 FNDPAGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFV 736
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 737 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 774
>gi|154338237|ref|XP_001565343.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1126
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 282/545 (51%), Gaps = 54/545 (9%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQ GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 432 IGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQ 491
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
T K L++ PSS+++NW EF +W F +S P D I+ +
Sbjct: 492 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVKHFAIS-ESTPKGDRIISRF 541
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNW-EIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G +VL+ S+D R + LS + + E+V+ DE HRLKN + K A L TRNRI
Sbjct: 542 DGDG-DVLVISYDQLRKYIDRLSRLRFVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRII 600
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + E + + ++V PG LG R+ F ++EP+ G+ P+ + +R
Sbjct: 601 LSGTPIQNDLSEFHAMVNFVNPGILGNRDLFTRVFEEPVSLGRDPDCPDHLKSLGRDRAH 660
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQCLINKD 419
+L + ++++LRRT+ +L K D VF + Q++AY++L + E +C
Sbjct: 661 YLSMLTQRFILRRTQSINESYLPP-KVDVTVFVRLGAKQEQAYQKLADIVESAEC----- 714
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL-QQISNHLELIKPNPRDEPDK 478
+PL + ++L C + V L Q+ N + + + +
Sbjct: 715 ------TPLVLISALRKL--------CNHMDLFHDAVHLSHQVGNGIG--ASAQQQQAGR 758
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG--DKIL 536
+R + A G ++ + S + KM + ++ G DK++
Sbjct: 759 RRGRSSAADEPQGIPFSVLPKGFKPGSL----SMDYGSKMHFVSLVLDELRENGEHDKLV 814
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+ S + LDI+ K ++ +LDGSTP RQ LVD FN S++ VFL+S++AGG
Sbjct: 815 IVSNFTQTLDIIAALCNSKRIAYFQLDGSTPIKKRQQLVDYFNVPDSQEVVFLLSSKAGG 874
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE +Y RQV
Sbjct: 875 VGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQVS 934
Query: 656 KQQLS 660
KQ LS
Sbjct: 935 KQGLS 939
>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 810
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 205/696 (29%), Positives = 334/696 (47%), Gaps = 92/696 (13%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ + + N P RPP + +Q G + + P +P E A V
Sbjct: 106 FRKAFIIPMVNKNSGAYNPNRPPPTLGLRQ----GAAF-VAKPLHDPSG--EFALVLYDP 158
Query: 82 VFDDEEKEKEQEQEKFGRHQLG---QFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCR 136
DD+ K +E+ E H E L + K +GE+P +VP I+ R
Sbjct: 159 TIDDKPKVREKPAETPAEADTAGEMDAPLVHKSLAEILGIRKKVEGEHP--RVPVVIDPR 216
Query: 137 LLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESS 186
L + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 217 LTKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAG 276
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE 242
STI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 277 KSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 327
Query: 243 ACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 328 QWAISSGRAVTRPVIIVSYETLRLNVEELKHTQIGLMLCDEGHRLKNGDSQTFTALNNLN 387
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
R+ L+GT +QN + E ++L + P LGTR FR+ ++ + G+ A E
Sbjct: 388 VTRRVILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIAILRGRDADATESERAK 447
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
DER + L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y ++ PEIQ
Sbjct: 448 GDERLKELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNLFIRSPEIQA 506
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
L+ PL + K+L N P L+ L + E P
Sbjct: 507 LLRG----KGSQPLKAINILKKLCN------------HPDLLNLSEDLPGCENWFPEDYV 550
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGD 533
D + +D ++ GKM+ L++++ A D
Sbjct: 551 PKDSRGRDRDIKPWY-------------------------SGKMQVLDRMLARIRADTND 585
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
KI+L S LDI EK +GY RLDG+ RQ LVD FN + VFL+S++
Sbjct: 586 KIVLISNYTSTLDIFEKLCRSRGYGNLRLDGTMNVTKRQKLVDRFNDPEGTEFVFLLSSK 645
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE ++ R
Sbjct: 646 AGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGSIEEKIFQR 705
Query: 653 QVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
Q +KQ LS+ V S + +R+F + +++ +++G+
Sbjct: 706 QSHKQSLSSCVVDSAEDVERHFSLDSLKELFQYRGD 741
>gi|190348362|gb|EDK40804.2| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 283/548 (51%), Gaps = 87/548 (15%)
Query: 126 IIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
I + P+ I + L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTIAFL +
Sbjct: 110 ITESPSYIKDGTLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTIAFLGYL----- 164
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEAC 244
+K+ +D G +II P S + NW EF+RW+ ++ N+D E ++ C
Sbjct: 165 ----RYIKN--ID--GPFIIIVPKSTLDNWRREFARWTPEVKAVVLQGNKDDRAEFIKNC 216
Query: 245 ----GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+VLITSF+ S L + W+ ++VDEAHR+KNE S L ++NR+
Sbjct: 217 LLQADFDVLITSFEMVMREKSQLKKFRWQYIVVDEAHRIKNEDSSLSQIIRLFYSKNRLL 276
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F E+++ G + + D+ Q
Sbjct: 277 ITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFES---QGSKEEGNQ------DKVVQ 327
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VL +LLRR K + L+ E N V+C M+++Q R Y++LL+ KD+
Sbjct: 328 QLHKVLSPFLLRRVKSDVETSLLPKIETN-VYCGMTEMQIRWYKKLLE---------KDI 377
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPD 477
G + + E RL N+ +++L++ NH L +P P
Sbjct: 378 DAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGP----- 417
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D LA + GKM L+K++ + +G ++L+
Sbjct: 418 PYTTDEHLAY--------------------------NSGKMIILDKMLKKFREQGSRVLI 451
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +D +N+ S K +FL++TRAGGL
Sbjct: 452 FSQMSRLLDILEDYCYLRDYEYCRIDGSTAHEDRIEAIDSYNAPDSDKFIFLLTTRAGGL 511
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ V+++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K
Sbjct: 512 GINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQK 571
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 572 LRLDQLVI 579
>gi|146087788|ref|XP_001465905.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
Length = 1126
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 284/546 (52%), Gaps = 56/546 (10%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQ GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 431 IGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQ 490
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
T K L++ PSS+++NW EF +W F +S P D I+ +
Sbjct: 491 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVRHFAIS-ESTPKGDRIISRF 540
Query: 242 EACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G +VL+ S+D R + LS + + E+V+ DE HRLKN + K A L TRNRI
Sbjct: 541 DGDG-DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRII 599
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + E + + ++V PG LG R+ F ++EP+ G+ P+ + +R
Sbjct: 600 LSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRAH 659
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQCLINKD 419
+L + ++++LRRT+ +L K D VF + + Q+ AY++L + E +C
Sbjct: 660 YLSVLTQRFILRRTQSINESYLPP-KVDVTVFVRLGEKQELAYQKLADVVESAEC----- 713
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL-QQISNHLELIKPNPRDEPDK 478
+PL + ++L C + V L QI N + + +
Sbjct: 714 ------TPLVLISALRKL--------CNHMDLFHDAVHLSHQIGNSAGALAQQQQAG--R 757
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG-KMRALEKLMYSWASKG--DKI 535
+R + A G + ++ + F S CG KM + ++ G DK+
Sbjct: 758 RRGRSSAAGESRGIPLSVL-----PKGFKPGSLSVDCGSKMHFVSLVLDELKRNGERDKL 812
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
++ S + LDI+ K ++ +LDGSTP RQ LVD FN S++ VFL+S++AG
Sbjct: 813 VIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGSQEIVFLLSSKAG 872
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE +Y RQV
Sbjct: 873 GVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQV 932
Query: 655 YKQQLS 660
KQ LS
Sbjct: 933 SKQGLS 938
>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 852
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 336/685 (49%), Gaps = 97/685 (14%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ S+ + N P RPP + R G T+ + P +P E + V
Sbjct: 149 FRKAFSIPLINKNSAAYNPNRPPPTLGL----RTGATF-IAKPLHDPSG--EFSIVLYDP 201
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINC 135
DD+ K E++Q+ + + + D H E L + K +G++P +VP I+
Sbjct: 202 TVDDKPKVPEKKQD--NKDAEAEAKIDAPLVHKSLAEILGIKKKVEGDHP--RVPVVIDP 257
Query: 136 RLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 258 RLAKVLRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEA 317
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL 241
STI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 318 GKSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 368
Query: 242 EACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 369 RQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFNALNSL 428
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R+ L+GT +QN + E + L + P LGTR FR+ ++ P+ G+ A E +
Sbjct: 429 NVTRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFELPILRGRDADASEIDRK 488
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
DE L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y + PEIQ
Sbjct: 489 KGDECLSELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITSPEIQ 547
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L L G S P L + L+++ NH +L+
Sbjct: 548 AL------------------------LRGKGSQP----LKAINILKKLCNHPDLL----- 574
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-AS 530
D S PD D V A+ D+K GKM+ L++++
Sbjct: 575 -----NIADDLPGSENCYPD-DYVPKEARGRD----RDIKPWYSGKMQVLDRMLARIRQD 624
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN+ ++ VFL+
Sbjct: 625 TNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLL 684
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE +
Sbjct: 685 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKI 744
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYF 673
+ RQ +KQ LS+ V S + +R+F
Sbjct: 745 FQRQSHKQSLSSCVVDSAEDVERHF 769
>gi|412993466|emb|CCO13977.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 1135
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 296/582 (50%), Gaps = 93/582 (15%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAFLAAV 179
P ++V + L HQREGV FLY+ G IL DDMGLGKT+Q IA + +
Sbjct: 163 PAVKVDNMLTRWLRPHQREGVSFLYECVMGLRGFEGAGCILADDMGLGKTLQAIALMWTL 222
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNR--- 234
+++I +D K K V+I+CP+S++ NW+ E +W + G +R
Sbjct: 223 L------NTSIEEDQKPTVKK-VVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSRADA 275
Query: 235 ----DMILEKLEACGVEVLITSFDSYRI-HGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
M L +VLI S++++RI H +E + ++VI DEAHRLKN ++ A
Sbjct: 276 ESAVKMFLAPQSRS--QVLIVSYETFRIYHERFTTESSCQLVICDEAHRLKNGETLTNQA 333
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
++ + RI L+GT MQN + E Y++ + PG LGT + F + Y+ P+ G+ A +
Sbjct: 334 LAKMACKRRIMLSGTPMQNHLDEFYSMVSFCNPGILGTTKEFAKKYERPILAGREPYATD 393
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+ A+ER + L ++ K++LRRT HL K +V C + LQ+ Y LL
Sbjct: 394 AELAKANERNEMLSVIVNKFILRRTNTILSKHL-PPKVIEIVCCKTTPLQRSIYEHLL-- 450
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
S + + Q + K++D VL C+ L+++ NH +LI
Sbjct: 451 -------------SEKARIAQ-KTGKQMD------------VLACITALKKLCNHPKLIF 484
Query: 470 PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES----FIGLSD-----------VKS 514
R++ + D GGNA +++ F GL D +
Sbjct: 485 DAIREKKYAGKTD---------------GGNAIDDNLTPYFHGLYDGGGSGRGGRAGGQM 529
Query: 515 C-------GKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
C GK L +L++ ++ D+I++ S + LD++E + Y RLDG T
Sbjct: 530 CEGWEWHGGKFAVLARLLHQLRTETSDRIVIISNYTQTLDLVEILCRQNNYPSLRLDGGT 589
Query: 567 PSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
N RQ LV+ FN + + +FL+S++AGG G+NLV NR+V+FDP+WNPA D QA R
Sbjct: 590 SINKRQKLVNAFNDLTNNEFIFLLSSKAGGCGINLVGGNRLVLFDPDWNPANDKQAAARC 649
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+R GQK+ +R LS+G++EE V+ RQ+ KQ L+++ V G+
Sbjct: 650 WRDGQKKKCYEYRFLSSGTIEEKVFQRQLAKQALTSV-VDGR 690
>gi|116201585|ref|XP_001226604.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177195|gb|EAQ84663.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1125
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 276/543 (50%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PGFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G L+ P S + NW+ EF+RW+ NV + G + +I E+L
Sbjct: 229 ---RHIMGTTGPHLVTVPKSTLDNWKREFARWTPEVNVLVLQGAKEERQQLINERLVDEN 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDAEAFDQWF-----SGQD--------RDQDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKSDVEKSLLPKKEVN-VYIGMSEMQVKWYQKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 485
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 486 -----------------------------VYNAGKMIVLDKLLKRMQKQGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DGST R + +DD+N S++ VFL++TRAGGLG+NL
Sbjct: 517 RLLDILEDYCVFRQYKYCRIDGSTAHEDRIAAIDDYNKPDSEKFVFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 577 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 636
Query: 662 IAV 664
+ +
Sbjct: 637 LVI 639
>gi|385303978|gb|EIF48017.1| dna dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 862
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/589 (30%), Positives = 301/589 (51%), Gaps = 99/589 (16%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L ++Q+ GV++L++LY K GGI+GD+MGLGKTIQ IAFLA
Sbjct: 145 RIPGDIYPSLFDYQKTGVQWLWELYSQKTGGIIGDEMGLGKTIQVIAFLAG--------- 195
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMI--------- 237
+ K+ K VL++CP++V++ W EF RW F V I H M
Sbjct: 196 --LQYSGKLKKP--VLVVCPATVLRQWCNEFHRWWPAFRVMILHSIGSGMSGMSKKRRSQ 251
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
L E ++ + S+R SI++E N ++ HR ++ + + +
Sbjct: 252 LRDEENXEEDLELEEHQSHRSAHSIMNEQNARELV----HRAVSKGHVIITTYVGV---- 303
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
RI GT +QN ++EL++LFD++ PG LGT F++ + P+ G A ++ +
Sbjct: 304 RIYANGTPIQNNLVELWSLFDFIFPGRLGTLPVFQKQFCIPINLGGYANATNVQVQAGYK 363
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L ++ YLLRR K + + + K + V+FC ++ Q+ Y+ L +I+ ++
Sbjct: 364 CAVILKDLISPYLLRRVKAD-VAQDLPKKSEMVLFCNLTKRQRVLYQSFLHSEDIERILK 422
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD-EP 476
+ + L G D L++I NH +L++ D +
Sbjct: 423 G-----------------KRNALYGIDI------------LRKICNHPDLVEGKIIDGKR 453
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
+ KD+ + ES L++ GKM+ + KL+ W + K L
Sbjct: 454 EXGTKDS------------------KKESSRTLAE--KSGKMQVVSKLLQLWQKENRKAL 493
Query: 537 LFSYSVRMLDILEKFL------IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+F+ + +ML+I+E ++ + + R+DG+TP RQ LVD FN+ P QVFL++
Sbjct: 494 IFTQTRQMLNIMEHYMDVLNRETNNXFGYLRMDGTTPIGERQKLVDSFNTDPKYQVFLLT 553
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
TR GGLG+NL A+RV+I+DP+WNP+ +QA++R++R GQK+ V ++RL+ AG++EE +Y
Sbjct: 554 TRVGGLGVNLTGASRVIIYDPDWNPSTXIQARERAWRLGQKKDVTIYRLMIAGTIEEKIY 613
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFE----------GVQDCKEFQ-GELFG 688
RQ++KQ L+N + +KR+F+ G QD K +LFG
Sbjct: 614 HRQIFKQFLTNKVLKDPKQKRFFKMTDMYDLFTLGDQDTKGTDTADLFG 662
>gi|353234334|emb|CCA66360.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Piriformospora indica DSM 11827]
Length = 819
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 285/561 (50%), Gaps = 71/561 (12%)
Query: 137 LLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY+ + +N++G I+ D MGLGKT+QTI+ + + + + +
Sbjct: 224 LRPHQIEGVKFLYRCTSGMVVENQYGCIMADGMGLGKTLQTISLIWTLLKQSPHAGKPTI 283
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC------ 244
+ +I CPSS+++NW E +W V + R E +E
Sbjct: 284 EK--------CIISCPSSLVRNWANELDKWLGKGTVGCFALDGRGKKAEVIEGVRRWVAA 335
Query: 245 -----GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ V+I S+++ R L+ ++I DE HRLKN S+ + LK + R+
Sbjct: 336 RGRNVTLPVMICSYETLRTLAQELANCEIGLLICDEGHRLKNGDSQTFQILTSLKVQRRV 395
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN + E ++L ++ P LGT+ FR+ ++ + G+ A + ++ +
Sbjct: 396 ILSGTPIQNDLSEYFSLLNFANPNYLGTQAEFRKNFENTIIRGRDADATDAVKDASEAKL 455
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
+ L A++ +++RRT E +L + K + VVFC S+LQ YR + PEI+ L
Sbjct: 456 KELGALVAPFIIRRTNELLSKYLPI-KYEQVVFCRPSELQLALYRLFITSPEIKSL---- 510
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
L G S P L + L+++ NH EL+ D P +
Sbjct: 511 --------------------LRGKGSQP----LKAIGLLKKLCNHPELL-----DLPGEL 541
Query: 480 RKDAELASAVFGPDIDLVGGNAQN----ESFIGLSDVKSCGKMRALEKLMYSWASKG-DK 534
EL +G +G + +N E + D + GK LE++++ ++ DK
Sbjct: 542 AGSEELLPPGYG-----MGNSTRNLGGRERAPAMLDCQLSGKFIVLERMLHHIKTQTTDK 596
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
I+L S LD++E+ KGY + RLDG + RQ LVD FN + +FL+S++A
Sbjct: 597 IVLISNYTATLDLMERLCRAKGYGYFRLDGQMGISKRQKLVDRFNDPEGSEFIFLLSSKA 656
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R + GS+EE ++ RQ
Sbjct: 657 GGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFVMTGSIEEKIFQRQ 716
Query: 654 VYKQQLSNIAVSGKLE-KRYF 673
KQ LS+ V K + +R+F
Sbjct: 717 AQKQALSSCVVDEKEDTERHF 737
>gi|159126264|gb|EDP51380.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus A1163]
Length = 1406
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 304/599 (50%), Gaps = 90/599 (15%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQRE 143
DDEE + E+ GR ++ + H + + E P I V + L E+Q +
Sbjct: 486 DDEEDVGSDDDEEGGRRKIDYYAVAHR------IKEEVTEQPKILVGGT----LKEYQMK 535
Query: 144 GVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVL 203
G++++ LY N GIL D+MGLGKTIQTI+ + + K +++ G L
Sbjct: 536 GLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNN-------------GPFL 582
Query: 204 IICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHG 260
+I P S + NW +EF +W+ + + +Y GP R +++ +VL+T+++
Sbjct: 583 VIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYIIKDR 642
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLTGTIMQNKIMELYNLFDW 319
ILS++ W +IVDE HR+KN +SKL + T R R+ LTGT +QN + EL+ L ++
Sbjct: 643 PILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNF 702
Query: 320 VAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLVAVLRKYLLRRT 374
V P + + F E+++ P + GQ L+ E+ + I + L VLR +LLRR
Sbjct: 703 VLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI-----RRLHKVLRPFLLRRL 757
Query: 375 KEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
K++ + + K++ V+ C S LQ R Y+ Q + + + S G
Sbjct: 758 KKD-VEKDLPDKQERVIKCRFSALQARLYK--------QLVTHNKMVVSDGK--GGKTGM 806
Query: 435 KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
+ L N+ L++L+++ NH VF P
Sbjct: 807 RGLSNM--------------LMQLRKLCNH----------------------PFVFEPVE 830
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
D + I ++ GK L++++ + + G ++L+F ++++I+E FL
Sbjct: 831 DQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRL 886
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIFDPNW 613
+G + RLDGST S+ R L+ FN+ S+ FL+STRAGGLGLNL +A+ V+IFD +W
Sbjct: 887 RGMKYLRLDGSTKSDDRSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDW 946
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKR 671
NP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K + + +GK + +
Sbjct: 947 NPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGKFDNK 1005
>gi|70998556|ref|XP_754000.1| RSC complex subunit (Sth1) [Aspergillus fumigatus Af293]
gi|66851636|gb|EAL91962.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus Af293]
Length = 1406
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 304/599 (50%), Gaps = 90/599 (15%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQRE 143
DDEE + E+ GR ++ + H + + E P I V + L E+Q +
Sbjct: 486 DDEEDVGSDDDEEGGRRKIDYYAVAHR------IKEEVTEQPKILVGGT----LKEYQMK 535
Query: 144 GVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVL 203
G++++ LY N GIL D+MGLGKTIQTI+ + + K +++ G L
Sbjct: 536 GLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNN-------------GPFL 582
Query: 204 IICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVLITSFDSYRIHG 260
+I P S + NW +EF +W+ + + +Y GP R +++ +VL+T+++
Sbjct: 583 VIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRWGNFQVLLTTYEYIIKDR 642
Query: 261 SILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLTGTIMQNKIMELYNLFDW 319
ILS++ W +IVDE HR+KN +SKL + T R R+ LTGT +QN + EL+ L ++
Sbjct: 643 PILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQNNLPELWALLNF 702
Query: 320 VAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLVAVLRKYLLRRT 374
V P + + F E+++ P + GQ L+ E+ + I + L VLR +LLRR
Sbjct: 703 VLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI-----RRLHKVLRPFLLRRL 757
Query: 375 KEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
K++ + + K++ V+ C S LQ R Y+ Q + + + S G
Sbjct: 758 KKD-VEKDLPDKQERVIKCRFSALQARLYK--------QLVTHNKMVVSDGK--GGKTGM 806
Query: 435 KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
+ L N+ L++L+++ NH VF P
Sbjct: 807 RGLSNM--------------LMQLRKLCNH----------------------PFVFEPVE 830
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
D + I ++ GK L++++ + + G ++L+F ++++I+E FL
Sbjct: 831 DQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRL 886
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIFDPNW 613
+G + RLDGST S+ R L+ FN+ S+ FL+STRAGGLGLNL +A+ V+IFD +W
Sbjct: 887 RGMKYLRLDGSTKSDDRSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDW 946
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKR 671
NP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K + + +GK + +
Sbjct: 947 NPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGKFDNK 1005
>gi|357143796|ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 287/573 (50%), Gaps = 62/573 (10%)
Query: 113 FEPLVL-------SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNK------HGGI 159
EPL+L ++ + I+V + L HQREGV+F++ G I
Sbjct: 190 IEPLILWQPEGCDKENNNFAAIEVDNLLVRYLRPHQREGVQFMFDCVSGLLSDDGIAGCI 249
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
L DDMGLGKT+Q+IA L + + + + +I+ P+S++ NWE E S
Sbjct: 250 LADDMGLGKTLQSIALLYTLLAQGFDGKPMVKR---------AVIVTPTSLVSNWESEIS 300
Query: 220 RWSTFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSE-VNWEIV 271
+W V + R +L + + ++VLI S++++R+H S + +++
Sbjct: 301 KWLKGKVQLLALCESTRADVLSGIGSFLKPLSRLQVLIISYETFRMHSSKFERPASCDLL 360
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I DEAHRLKN+++ A L RI L+GT MQN + E +++ ++ PG LG +F
Sbjct: 361 ICDEAHRLKNDQTLTNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDAAYF 420
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R +Y+ P+ G+ TA ++ ER L A + +++LRRT HL K VV
Sbjct: 421 RRYYEAPIICGREPTATAEEKKLGSERSGELSAKVNQFILRRTNALLSNHL-PPKIVEVV 479
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
C ++ LQ Y + ++ LI+++ KR +
Sbjct: 480 CCKLTPLQTTLYNHFIHSKNVKRLISEE--------------AKR------------SKI 513
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L + L+++ NH +LI + D + F P +L G + + + G
Sbjct: 514 LAYITALKKLCNHPKLIYDTIKSNKSGG-SDFDDCLRFFPP--ELFQGRSGSWTGGGGMW 570
Query: 512 VKSCGKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
V+ GKM L +L+ K D+I+L S + LD+ + + Y + RLDG+T N
Sbjct: 571 VELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYVRLDGATSINK 630
Query: 571 RQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFG 629
RQ LV+ FN S + VFL+S++AGG GLNLV NR+V+FDP+WNPA D QA R +R G
Sbjct: 631 RQKLVNQFNDLSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDG 690
Query: 630 QKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
QK+ V ++R LS G++EE VY RQ+ K+ L +
Sbjct: 691 QKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKV 723
>gi|118344288|ref|NP_001071967.1| SWI/SNF protein [Ciona intestinalis]
gi|70571306|dbj|BAE06719.1| Ci-SWI/SNF [Ciona intestinalis]
Length = 1003
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 277/542 (51%), Gaps = 88/542 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N + ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L LK
Sbjct: 129 NGEMRDYQIRGLNWMISLYENGISGILADEMGLGKTLQTISLLG------------YLKH 176
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPN-RDMILEKLEACG-VEVL 249
+ G ++I P S I NW EF RW S V + + R I+ + G +V
Sbjct: 177 YR-SIPGPHMVIVPKSTISNWVNEFERWCPSIRTVCLIGSKDQRATIIRDVMMPGEWDVC 235
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
ITS++ I + + NW V++DEAHR+KNEKSKL + ++ NR+ LTGT +QN
Sbjct: 236 ITSYEVIIIEKACFKKFNWRYVVIDEAHRIKNEKSKLSTIVRQFRSTNRLLLTGTPLQNN 295
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYD-EPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ L +++ P + E F +++ L+ + L L VLR
Sbjct: 296 LHELWALLNFLLPDVFNSSEDFDSWFNANNLEDDKGLVT-------------RLHGVLRP 342
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+LLRR K + + H ++ K++ ++ +S +Q+ Y ++L
Sbjct: 343 FLLRRLKSD-VEHSLLPKKETKIYTGLSKMQREWYTKIL--------------------- 380
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
K +D ++ +L L++L++ NH L A
Sbjct: 381 -----VKDIDIINAAGRTDRVRLLNILMQLRKCCNHPYL-----------------FDGA 418
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
GP +E V + GK+ L+KL+ + +GD++L+FS R+LDIL
Sbjct: 419 EPGPPY------TTSEHL-----VVNSGKLSVLDKLLPKFQEQGDRVLIFSQMTRILDIL 467
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
E + + +GY++ RLDG TP RQ +++FN S++ +F++STRAGGLG+NL++AN V+
Sbjct: 468 EDYCMWRGYNYCRLDGQTPHEDRQRQINEFNRPGSEKFIFMLSTRAGGLGINLMTANIVI 527
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SG 666
+FD +WNP D+QA DR+ R GQK+ V+VFRL++ ++EE + R K L NI + G
Sbjct: 528 LFDSDWNPQVDMQAMDRAHRIGQKKQVMVFRLITENTVEERIIERAEMKLHLDNIVIQQG 587
Query: 667 KL 668
+L
Sbjct: 588 RL 589
>gi|448522400|ref|XP_003868680.1| Isw2 protein [Candida orthopsilosis Co 90-125]
gi|380353020|emb|CCG25776.1| Isw2 protein [Candida orthopsilosis]
Length = 1047
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 280/538 (52%), Gaps = 84/538 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + +K+ +
Sbjct: 138 LREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYL---------RYVKN--I 186
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLITS 252
D G +II P S + NW EF++W+ +V + G ++I ++L +VLITS
Sbjct: 187 D--GPFIIIVPKSTLDNWRREFAKWTPDVSVVVLQGDKESRANIIKDRLYTADFDVLITS 244
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
F+ S L + WE ++VDEAHR+KNE+S L +RNR+ +TGT +QN + E
Sbjct: 245 FEMVLREKSALKKFKWEYIVVDEAHRIKNEQSSLSQIIRLFYSRNRLLITGTPLQNNLHE 304
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQ--RLTAPERFIRIADERKQHLVAVLRKYL 370
L+ L +++ P G E F + +D+ + Q + A E+ D+ Q L +L +L
Sbjct: 305 LWALLNFLLPDVFGDSEQFDDTFDQQNNNEQDKKTKAEEQ-----DKVIQELHQLLSPFL 359
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L+ E N V+ M+D+Q Y+ LL+ KD+ G + +
Sbjct: 360 LRRVKSDVEKSLLPKIETN-VYTGMTDMQVSWYKNLLE---------KDIDAVNGV-VGK 408
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELAS 487
E RL N+ +++L++ NH L +P P D+
Sbjct: 409 REGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGPPYTTDEHL------- 447
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
V + GKM L+K++ + +G ++L+FS R+LDI
Sbjct: 448 ------------------------VYNSGKMIILDKMLKKFKQEGSRVLIFSQMSRVLDI 483
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANRV 606
LE + + Y + R+DGST R +D++N+ S K +FL++TRAGGLG+NL SA+ V
Sbjct: 484 LEDYCYFREYEYCRIDGSTAHEDRIEAIDEYNAPDSDKFIFLLTTRAGGLGINLTSADVV 543
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L + +
Sbjct: 544 ILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVI 601
>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 799
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 289/573 (50%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + N +G I+ D+MGLGKT+Q I L
Sbjct: 193 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWT 252
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + E+ T+ K V+I CP++++ NW E +W N + G +
Sbjct: 253 LLKQSPEAGKPTVQK---------VVIACPATLVGNWANELVKWLGKDAVNPFVIDGKAS 303
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ + +L + VLI S+++ R++ L E +++ DE HRLKN +S+
Sbjct: 304 KAELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQ 363
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ L+GT +QN + E Y+L ++ PG LG+R F + ++ P+ G+
Sbjct: 364 TFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDA 423
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E + DE L+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y
Sbjct: 424 DGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPV-KYEHVVFCNLAPFQMDLYNH 482
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q P+I+ L+ PL + K+L N P L+ L
Sbjct: 483 FIQSPDIKSLLRG----KGSQPLKAIGILKKLCN------------HPDLLNLSADLPGS 526
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
E + P+ P+ + +D DVKS GKM L++
Sbjct: 527 EQLFPDDYVPPEGRGRD---------------------------RDVKSWYSGKMMVLDR 559
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN
Sbjct: 560 MLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPD 619
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
++ VFL+S++AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 620 GEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 679
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
GS+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 680 TGSIEEKIFQRQSHKQLLSSCVVDSAEDVERHF 712
>gi|443894508|dbj|GAC71856.1| chromatin remodeling complex WSTF-ISWI, small subunit [Pseudozyma
antarctica T-34]
Length = 1106
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 282/550 (51%), Gaps = 84/550 (15%)
Query: 121 DGEYPIIQVPASINCRLL-EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
+G + + PA + + ++Q +G+ ++ LY N GIL D+MGLGKT+QTI+FL
Sbjct: 212 EGAFVFNESPAYVKGGTMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLG-- 269
Query: 180 FGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN--RDM 236
L+D + + G+ L++ P S + NW EF RW FNV G RD
Sbjct: 270 ----------YLRDFR-NTPGFHLVVVPKSTLDNWYREFQRWVPGFNVVTLKGSKEERDE 318
Query: 237 ILEK-LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
++ K L +VLIT+++ S L +++WE +I+DEAHR+KN S L +
Sbjct: 319 VIHKHLLPQDFDVLITTYEMCLREKSALKKLSWEYIIIDEAHRIKNVDSMLSQIVRAFNS 378
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
R+R+ +TGT +QN +MEL++L +++ P E F ++ Q
Sbjct: 379 RSRLLITGTPLQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQ------------ 426
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D+ Q L VLR +LLRR K + L+ KE N +F ++++Q++ Y+ +L+
Sbjct: 427 DQVVQQLHKVLRPFLLRRVKADVEKSLLPKKEIN-LFVGLTEMQRKWYKSILE------- 478
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
KD+ G + + E RL N+ +++L++ NH L
Sbjct: 479 --KDIDAVNGG-VGKKEGKTRLLNI--------------VMQLRKCCNHPYLFD------ 515
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
A GP +E + SD KM+ L+KL+ + G ++
Sbjct: 516 -----------GAEPGPPF------TTDEHLVFNSD-----KMKKLDKLLRKMKANGSRV 553
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
L+FS RMLDILE + + + Y++ R+DG T R + +D++N S++ VFL++TRAG
Sbjct: 554 LIFSQMSRMLDILEDYCLFRDYAYCRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAG 613
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL +A+ VV+FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE + R
Sbjct: 614 GLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTENAIEERILERAA 673
Query: 655 YKQQLSNIAV 664
K +L + +
Sbjct: 674 QKLRLDQLVI 683
>gi|354547921|emb|CCE44656.1| hypothetical protein CPAR2_404600 [Candida parapsilosis]
Length = 1062
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 278/538 (51%), Gaps = 85/538 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDESSDSTILKDNK 195
L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTI+FL + + K
Sbjct: 140 LREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYVK------------H 187
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLIT 251
+D G +II P S + NW EF++W+ NV + G ++I ++L +VLIT
Sbjct: 188 ID--GPFIIIVPKSTLDNWRREFAKWTPDVNVVVLQGDKELRANIIKDRLYTADFDVLIT 245
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
SF+ S L + WE ++VDEAHR+KNE+S L +RNR+ +TGT +QN +
Sbjct: 246 SFEMVLREKSALKKFKWEYIVVDEAHRIKNEQSSLSQIIRLFYSRNRLLITGTPLQNNLH 305
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKH-GQRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P G E F + +D+ ++ A E+ D+ Q L +L +L
Sbjct: 306 ELWALLNFLLPDVFGDSEQFDDTFDQQNNDLDEKAKAEEQ-----DKVIQELHQLLSPFL 360
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L+ E N V+ M+D+Q Y+ LL+ KD+ G + +
Sbjct: 361 LRRVKSDVEKSLLPKIETN-VYTGMTDMQVSWYKNLLE---------KDIDAVNGV-VGK 409
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELAS 487
E RL N+ +++L++ NH L +P P D+
Sbjct: 410 REGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGPPYTTDEHL------- 448
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
+ + GKM L+K++ + +G ++L+FS R+LDI
Sbjct: 449 ------------------------IYNSGKMIILDKMLKKFKQEGSRVLIFSQMSRVLDI 484
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANRV 606
LE + + Y + R+DGST R +D++N+ S K +FL++TRAGGLG+NL SA+ V
Sbjct: 485 LEDYCYFREYEYCRIDGSTAHEDRIEAIDEYNAPDSDKFIFLLTTRAGGLGINLTSADVV 544
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L + +
Sbjct: 545 ILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVI 602
>gi|398015957|ref|XP_003861167.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
gi|322499392|emb|CBZ34465.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
Length = 1126
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 284/546 (52%), Gaps = 56/546 (10%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQ GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 431 IGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQ 490
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
T K L++ PSS+++NW EF +W F +S P D I+ +
Sbjct: 491 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVRHFAIS-ESTPKGDRIISRF 540
Query: 242 EACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G +VL+ S+D R + LS + + E+V+ DE HRLKN + K A L TRNRI
Sbjct: 541 DGDG-DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRII 599
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + E + + ++V PG LG R+ F ++EP+ G+ P+ + +R
Sbjct: 600 LSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRAH 659
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQCLINKD 419
+L + ++++LRRT+ +L K D VF + + Q+ AY++L + E +C
Sbjct: 660 YLSVLTQRFILRRTQSINESYLPP-KVDVTVFVRLGEKQELAYQKLADVVESAEC----- 713
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL-QQISNHLELIKPNPRDEPDK 478
+PL + ++L C + V L QI N + + +
Sbjct: 714 ------TPLVLISALRKL--------CNHMDLFHDAVHLSHQIGNSAGALAQQQQAG--R 757
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG-KMRALEKLMYSWASKG--DKI 535
+R + A G + ++ + F S CG KM + ++ G DK+
Sbjct: 758 RRGRSSAAGESRGIPLSVL-----PKGFKPGSLSVDCGSKMHFVSLVLDELKRNGERDKL 812
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
++ S + LDI+ K ++ +LDGSTP RQ LVD FN S++ VFL+S++AG
Sbjct: 813 VIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGSQEIVFLLSSKAG 872
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE +Y RQV
Sbjct: 873 GVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQV 932
Query: 655 YKQQLS 660
KQ LS
Sbjct: 933 SKQGLS 938
>gi|156043545|ref|XP_001588329.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980]
gi|154695163|gb|EDN94901.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1086
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 276/548 (50%), Gaps = 100/548 (18%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 183 PGFIQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 232
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--------NRDMILEK 240
+ +D G LI+ P S + NW+ EF+RW+ NV + G N +I EK
Sbjct: 233 ---RHIMDITGPHLIVVPKSTLDNWKREFARWTPEVNVLVLQGAKDERNTLINERLIDEK 289
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+
Sbjct: 290 FDVC-----ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLL 344
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F +++ GQ+ D Q
Sbjct: 345 ITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWF-----SGQQ--------EDQDTVVQ 391
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VLR +LLRR K + L+ KE N ++ MSD+Q + Y+++L+ KD+
Sbjct: 392 QLHRVLRPFLLRRVKADVEKSLLPKKEIN-LYIGMSDMQVKWYKKILE---------KDI 441
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPD 477
G+ + E RL N+ +++L++ NH E +P P D
Sbjct: 442 DAVNGAG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTD 486
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ +F + GKM L+KL+ G ++L+
Sbjct: 487 EH--------LIF-----------------------NAGKMVMLDKLLTRMKKAGSRVLI 515
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + + + + R+DG T R +DD+N S++ VFL++TRAGGL
Sbjct: 516 FSQMSRLLDILEDYCVFREFKYCRIDGGTAHEDRIQAIDDYNKPGSEKFVFLLTTRAGGL 575
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K
Sbjct: 576 GINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEEKVLERAAQK 635
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 636 LRLDQLVI 643
>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum
CBS 127.97]
Length = 820
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 293/573 (51%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I +
Sbjct: 214 KVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQCITLMWT 273
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + E+ T+ K +I CP++++ NW E +W N + G +
Sbjct: 274 LLKQSPEAGKPTVQK---------AVIACPATLVGNWANELVKWLGKDAINPFVIDGKAS 324
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ ++ +L + VLI S+++ R++ L + +++ DE HRLKN S+
Sbjct: 325 KTELISQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQ 384
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
Y+A +L + R+ L+GT +QN + E ++L D+ PG LG+R F + Y+ P+ G+
Sbjct: 385 TYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDA 444
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
+ + +ER L+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y
Sbjct: 445 DGTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPV-KYEHVVFCNLAPFQLDLYNH 503
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 504 FIQSPEIKSL------------------------LRGKGSQP----LKAIGILKKLCNHP 535
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
+L+K + +D F D+ + G G +VK+ GKM L++
Sbjct: 536 DLLKLS---------EDLPGCEQYFPEDMMVSNGRR------GDREVKTWYSGKMMVLDR 580
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ E+ + Y RLDG+ R LVD FN
Sbjct: 581 MLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPN 640
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
++ VFL+S++AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQ + V+R ++
Sbjct: 641 GEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIA 700
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 701 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 733
>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
Length = 851
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 280/576 (48%), Gaps = 78/576 (13%)
Query: 113 FEPLVLS------------KDGEYPIIQVPASINCRLLEHQREGVKFLYKLY-------K 153
F PLV+S K + VP +++ L HQREGV FLY+
Sbjct: 209 FVPLVMSQPSFEHQWKYNQKKAPLSKVTVPYALSKHLRPHQREGVSFLYECVLGFRYTDA 268
Query: 154 NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQN 213
++ G IL D+MGLGKT+Q I+ + + + S ILK +LI+ PSS+++N
Sbjct: 269 DRFGAILADEMGLGKTLQCISLIYTLMKQGPYSQP-ILKR--------ILIVTPSSLMEN 319
Query: 214 WEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVI 272
W+ E S+W T + + + + + ++ + +LI S++ L V ++++I
Sbjct: 320 WDREISKWLKTERIFTFIVSPTNPLKKYAQSAHIPILIISYELLSKQIRELDSVKFDLMI 379
Query: 273 VDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFR 332
DE HRLKN K ++ RI LTGT +QN + E Y+L +V PG LGT F+
Sbjct: 380 CDEGHRLKNSAIKTSSILDAVECPRRILLTGTPIQNDLQEFYSLITFVNPGLLGTYSEFK 439
Query: 333 EFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
++ P+ Q+ F + R + L ++ ++LRRT +E I + GK++ V+F
Sbjct: 440 TKFENPILQSQQPGVLPMFANLGKARLEELNSITSSFILRRT-QEVINKYLPGKQEAVIF 498
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C S LQ+ R +Q E D P L+
Sbjct: 499 CHPSKLQETLLRTAIQFYE---------------------------KSDRSTYFPLQLI- 530
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++I NH LI + + V G I L+ N +G +D
Sbjct: 531 ---TVLKKICNHPSLIASTEKID-------------VGGSLIKLLNDNLPPWQDMGPTD- 573
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
GK+ L+ L+ + + +K ++ SY + LD++ Y + RLDGSTPS R
Sbjct: 574 --SGKLAVLDSLLETLIQRQEKAVIVSYYGKTLDMIMGLCEHYNYKYCRLDGSTPSQDRC 631
Query: 573 SLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
+V FNS S +FL+S +AGG+GLNL A+R++++D +WNPA DLQA R +R GQ
Sbjct: 632 KIVSSFNSPSSDTFIFLLSAKAGGIGLNLTGASRLILYDNDWNPASDLQAMSRIWRDGQT 691
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
R+V ++RL++A S+EE +Y RQ+ K LS V K
Sbjct: 692 RNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVDLK 727
>gi|193596661|ref|XP_001945595.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1048
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 271/544 (49%), Gaps = 92/544 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L +
Sbjct: 157 NGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYM-------------K 203
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVL 249
+ + G ++I P S +QNW EF +W ++ +RD I E +V
Sbjct: 204 HYRNIPGPHMVIVPKSTLQNWVNEFKKWCPTIRTVCMIGDRDTRVKFIRETFIPGDWDVC 263
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
ITS++ ++L ++ W +++DEAHR+KNEKSKL E +T NR+ LTGT +QN
Sbjct: 264 ITSYEMIIRERAVLRKIQWRYLVIDEAHRIKNEKSKLSEIIREFETTNRLLLTGTPLQNN 323
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ EL+ L +++ P + + F ++++ G + L AVLR +
Sbjct: 324 LHELWALLNFLLPDVFNSSDDFDQWFNTNNCFGDNALI------------ERLHAVLRPF 371
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LLRR K E L KE V + +S LQ+ Y ++L
Sbjct: 372 LLRRLKSEVEKRLKPKKEVKV-YVGLSKLQREWYTKVL---------------------- 408
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELA 486
K +D ++G + L++L++ SNH L +P P D+
Sbjct: 409 ----MKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH------- 457
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF +CGKM +KL+ + + ++L+FS RM+D
Sbjct: 458 -IVF-----------------------NCGKMVVFDKLLKALKEQDSRVLVFSQMTRMMD 493
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
ILE ++ KGY++ RLDG TP RQ ++++N SK+ VF++STRAGGLG+NL +A+
Sbjct: 494 ILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILSTRAGGLGINLATADV 553
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L + +
Sbjct: 554 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQ 613
Query: 665 SGKL 668
G+L
Sbjct: 614 QGRL 617
>gi|50549971|ref|XP_502458.1| YALI0D05775p [Yarrowia lipolytica]
gi|49648326|emb|CAG80646.1| YALI0D05775p [Yarrowia lipolytica CLIB122]
Length = 990
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 189/593 (31%), Positives = 299/593 (50%), Gaps = 92/593 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P IN L E+Q +G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 85 PPFINGTLREYQVQGLNWLISLHENSISGILADEMGLGKTLQTISFLGYL---------- 134
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
K G ++I P S + NW EF +W+ + G + +I ++
Sbjct: 135 ---RYKCGINGPHIVIVPKSTLDNWRREFEKWTPEVKTVVLRGDKTERAEIIANEVLTAD 191
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V+I+SF+ S L +V WE +IVDEAHR+KNE S L + NR+ +TGT
Sbjct: 192 FDVVISSFEIVIREKSALKKVAWEYIIVDEAHRIKNEDSMLSQIIRLFHSTNRLLITGTP 251
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P E F ++++E G+ E + + L V
Sbjct: 252 LQNNLHELWALLNFLLPDIFSEAETFDQWFEEKEAEGEEGENDEDSV------VKQLHKV 305
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MSD+Q + Y++LL+ KD+ G
Sbjct: 306 LRPFLLRRVKNDVEKSLLPKKELN-LYIGMSDMQVQWYQKLLE---------KDIDAVNG 355
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
L + E RL N+ +++L++ NH E +P P D+
Sbjct: 356 Q-LGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 397
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF +CGKM L+KL+ S+G ++L+FS
Sbjct: 398 -----LVF-----------------------NCGKMVMLDKLLKRLKSQGSRVLIFSQMS 429
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
RMLDILE + + Y +SR+DGST R + +D++N+ S++ VFL++TRAGGLG+NL
Sbjct: 430 RMLDILEDYCSFRDYEYSRIDGSTAHEDRIAAIDEYNAEGSEKFVFLLTTRAGGLGINLT 489
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V+++D +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R K +L
Sbjct: 490 SADIVILYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTENAVEEKVLERAAQKLRLDQ 549
Query: 662 IAV-SGKLEKRYFEGVQDCKEFQGELF-----GICNLFRDLSDNLFTSEIIES 708
+ + G+ +++ + E +G+L G ++F+ L T + IE+
Sbjct: 550 LVIQQGRTQQK---AAANNSESKGDLLSMIRHGTEDIFKSSKGTLKTEDDIEA 599
>gi|440635625|gb|ELR05544.1| hypothetical protein GMDG_07464 [Geomyces destructans 20631-21]
Length = 1122
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 275/536 (51%), Gaps = 90/536 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
+ ++Q G+ +L L++N GIL D+MGLGKT+QTIAFL + + +
Sbjct: 189 MRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYL-------------RHIM 235
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACGVEVLITS 252
D G L+I P S + NW+ EF++W+ NV + G + +I E+L +V ITS
Sbjct: 236 DITGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKDERNLLINERLVDEKFDVCITS 295
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT +QN + E
Sbjct: 296 YEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNNLHE 355
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L+ L +++ P G E F +++ GQ D Q L VLR +LLR
Sbjct: 356 LWALLNFLLPDVFGDSEAFDQWF-----SGQGAD--------QDTVVQQLHRVLRPFLLR 402
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K + L+ KE N ++ MSD+Q + Y+++L+ KD+ G+ + E
Sbjct: 403 RVKSDVEKSLLPKKEVN-LYIGMSDMQVKWYKKILE---------KDIDAVNGAG-GKRE 451
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAELASAV 489
RL N+ +++L++ NH E +P P D+
Sbjct: 452 SKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL--------- 488
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
V + GKM L++L+ +G ++L+FS R+LDILE
Sbjct: 489 ----------------------VVNAGKMVMLDRLLGRLQKQGSRVLIFSQMSRLLDILE 526
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVI 608
+ + + + + R+DGST R + +DD+N SK+ VFL++TRAGGLG+NL SA+ VV+
Sbjct: 527 DYCVFREFKYCRIDGSTAHEDRIAAIDDYNKPGSKKFVFLLTTRAGGLGINLTSADIVVL 586
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L + +
Sbjct: 587 YDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVI 642
>gi|356527520|ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 1030
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 194/681 (28%), Positives = 337/681 (49%), Gaps = 94/681 (13%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMG 165
+ DH P ++ G ++ A I L HQREG+K+L+ L+ GGILGDDMG
Sbjct: 295 ELDHFEPETDGSITFTGPRSTYKLQAKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMG 354
Query: 166 LGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TF 224
LGKT+Q FLA +F S +++ VLI+ P +++ +W E S +
Sbjct: 355 LGKTMQMCGFLAGLF------HSRLIR--------RVLIVAPKTLLPHWIKELSAVGLSE 400
Query: 225 NVSIYHGPNRDMILEKLEACGVE--VLITSFDSYRIHGSILSEVN------------WEI 270
Y G + + +L+ + VL+T++D R + L N W+
Sbjct: 401 KTREYFGTSTKLREYELQYILQDNGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDY 460
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
+I+DE H +KN ++ + LE+ + +RI ++GT +QN + EL+ LF++ P LG +
Sbjct: 461 MILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDHKW 520
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH-------LM 383
F+E ++ P+ G A +R R+ + L + Y LRR K E +
Sbjct: 521 FKERFENPILRGNDKHASDREKRVGSSVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKL 580
Query: 384 MGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGC 443
K++ +V+ ++ +Q+ Y L+ + L GSPL + K++ C
Sbjct: 581 SQKQEIIVWLRLTSVQRHLYEAFLKSEIV-------LSAFDGSPLAALTILKKI-----C 628
Query: 444 DSCPFCLVLPCLVKLQQISNHLE----LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGG 499
D P L+ + + LE ++KP ++A +A + D+ G
Sbjct: 629 DH-------PLLLTKRAAEDVLEGMDSMLKP----------EEANVAEKLAMHIADVAG- 670
Query: 500 NAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSF 559
+ F DV SC K+ + L+ + +G +L+FS + +ML+++++ L+ +GY F
Sbjct: 671 ---TDKFKDEQDV-SC-KISFIMSLLDNLIPEGHCVLIFSQTRKMLNLIQECLVSEGYDF 725
Query: 560 SRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDL 619
R+DG+T + R +V+DF +FL++++ GGLGL L A+RV++ DP WNP+ D
Sbjct: 726 LRIDGTTKATDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDN 785
Query: 620 QAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDC 679
Q+ DR++R GQK+ V+V+RL++ G++EE +Y +QVYK L A K + RYF QD
Sbjct: 786 QSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYF-SQQDL 844
Query: 680 KEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKG----LETHIVS 735
+ ELF + D+S + + ++ +R H + F+ L++H ++
Sbjct: 845 R----ELFSLPKEGFDVS---------VTQRQLNEEHDRQHTVDDSFRAHLEFLKSHSIA 891
Query: 736 SKDSNTLLSTGSKTRKSSDPE 756
++LL + + + +DPE
Sbjct: 892 GVSHHSLLFSKTAPVR-TDPE 911
>gi|348588337|ref|XP_003479923.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Cavia
porcellus]
Length = 933
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 281/552 (50%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + L HQ+EG+ FLY+ ++G IL D+MGLGKT+Q I+ +
Sbjct: 274 FPVVDVVIDPHVVYHLRPHQKEGIIFLYECVMGMRMNGRYGAILADEMGLGKTLQCISLI 333
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 334 WTLQCQGPYGGQPVIKR--------TLIVTPGSLVTNWRKEFKQWLGSERIKIFTVDQDH 385
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E +++ VLI S++ + + ++++I DE HRLKN K A L
Sbjct: 386 KVEEFMKSTFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALFSLSC 445
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
+ RI LTGT +QN + E + L D+V PG LG+ +R+ Y+EP+ + +A E +
Sbjct: 446 KKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLSSYRKIYEEPIIMSREPSASEEEKELG 505
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + ++LRRT +E I + K +NV+FC LQ Y++LL ++
Sbjct: 506 ERRAAELTRLTGLFILRRT-QEVINKYLPPKIENVLFCRPGTLQIELYKKLLNSQTVKF- 563
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
C GS ++ P L C+ L+++ NH L+ + + +
Sbjct: 564 ------CLQGS----------------VENSPH---LICIGALKKLCNHPCLLFNSIKGK 598
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D +++ +++ + F K GK++ L +L+ +
Sbjct: 599 ECSTTCDGNEEKSLYEGLLNVFPTDYNPLVFTE----KESGKLQVLSQLLAVIHELRPTE 654
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + LDIL+ R GYS++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 655 KVVLVSNYTQTLDILQDICKRYGYSYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSK 714
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 715 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHAVHIYRLLTTGTIEEKIYQR 774
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 775 QISKQALSGAVV 786
>gi|367010340|ref|XP_003679671.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
gi|359747329|emb|CCE90460.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
Length = 1049
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 203/700 (29%), Positives = 333/700 (47%), Gaps = 106/700 (15%)
Query: 126 IIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
+ + P+ I + +L ++Q +G+ +L L++NK GIL D+MGLGKT+QTI+FL +
Sbjct: 119 VTESPSYIQHGKLRDYQIQGLNWLIALHENKLSGILADEMGLGKTLQTISFLGHL----- 173
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN-------RDM 236
+ +G L+I P S + NW EF++W+ N + HG +D+
Sbjct: 174 --------RYRKGIEGPFLVIVPKSTLDNWRREFAKWTPEVNAIVLHGDKNARQEILQDV 225
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
ILE +VLITS++ L + W+ +I+DEAHR+KNE S L ++
Sbjct: 226 ILE----AKFDVLITSYEMVIKEKGTLKRLAWQYIIIDEAHRIKNEASTLSQIIRLFYSK 281
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
NR+ +TGT +QN + EL+ L +++ P G E F E+++ Q + ++ + +
Sbjct: 282 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEIFDEWFE------QNNSEEDQEVVV-- 333
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
Q L VL +LLRR K + L+ E N+ + M+D+Q Y+ LL+
Sbjct: 334 ---QQLHTVLNPFLLRRIKADVEKSLLPKIETNL-YVGMTDMQIHWYKSLLE-------- 381
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPR 473
KD+ G + + E RL N+ +++L++ NH E +P P
Sbjct: 382 -KDIDAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPP 425
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
D+ V + GKM L+KL++ KG
Sbjct: 426 YTTDEHL-------------------------------VYNAGKMIVLDKLLHRLKEKGS 454
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
++L+FS R+LDILE + + Y + R+DGST R +D+FN S++ VFL++TR
Sbjct: 455 RVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEERIEAIDEFNKPDSEKFVFLLTTR 514
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGGLG+NLV+A+ VV++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R
Sbjct: 515 AGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIER 574
Query: 653 QVYKQQLSNIAV---SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESH 709
K +L + + +GK D E FG N+F S + + IE
Sbjct: 575 AAQKLRLDQLVIQQGNGKKTANLGNNKDDLIEMIQ--FGAKNVFEKQSSKISVDDDIEEI 632
Query: 710 EEQGQQQERHHCTNQGFKGLE--THIVSSKDSNTLLSTGSKTRKSSDPEMARTSKPLLED 767
++G ++ + GL+ +++ + G +K SD ++ P +
Sbjct: 633 LQKGDRKTKELNAKYEALGLDDLQKFNGTENQSAYEWNGKNFQKKSDDKVVEWINPSRRE 692
Query: 768 MGIVYAHRNDDIVNKQ--PGFQRKKEESIPQDLSSRPPPI 805
+ D K+ G Q+ +S PQ + R P +
Sbjct: 693 RRREQQTYSVDDYYKEIIGGNQKSSNKSTPQPKAPRAPKL 732
>gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like
[Anolis carolinensis]
Length = 1049
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 290/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 174 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 220
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 221 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 280
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 281 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 340
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + E F ++D G Q+L + L AVL+ +LL
Sbjct: 341 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 387
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y ++L
Sbjct: 388 RRIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTKIL------------------------ 422
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 423 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 467
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D LV + GKM AL+KL+ +G ++L+FS R+LDILE +
Sbjct: 468 TDTHLVTNS---------------GKMVALDKLLSKLKEQGSRVLVFSQMTRLLDILEDY 512
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ S++ VF++STRAGGLG+NL +A+ V+++D
Sbjct: 513 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSRKFVFMLSTRAGGLGINLATADVVILYD 572
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 573 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 632
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 633 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTDEDITTILERGEKK 678
>gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818]
Length = 922
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 278/540 (51%), Gaps = 68/540 (12%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 252 LREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 306
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-GVEVL 249
V KK LI+CP ++I NW+ EF +W + + ++ + L V+
Sbjct: 307 GSQPVIKKA--LIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRLSDFTMGRSYSVM 364
Query: 250 ITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R + + +IV+ DE HRLK ++K A L T RI L+GT +QN
Sbjct: 365 IIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQN 424
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
++ E + + D+V P LGT + F ++ P+ ++ AP++ I R + L +
Sbjct: 425 ELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSP 484
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + HL K + ++FC + Q+ Y +L P Q ++ + S L
Sbjct: 485 FILRRTADILSKHL-PPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLR-----NSESAL 538
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ K++ C+S P L+K P+ E + + +D+ +++
Sbjct: 539 QLITILKKV-----CNS-------PSLLK--------------PKVEDNGKGEDSSMSAF 572
Query: 489 V--FGPDID--LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYSVR 543
+ P+I L G S GK+R L++L+Y+ SK +K++L S
Sbjct: 573 ISSLPPNIHRCLAAG--------------SSGKIRVLDQLLYNLQSKTTEKVVLVSNYTS 618
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLV 601
L++L L F RLDGSTP+ RQ+LV+DFN SPS FL+S +AGG GLNL+
Sbjct: 619 TLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNLI 678
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R+V+FD +WNPA D+QA R R GQKRH ++RLL G +EE ++ RQV K L++
Sbjct: 679 GASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLAD 738
>gi|401842508|gb|EJT44686.1| ISW1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1069
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 282/551 (51%), Gaps = 84/551 (15%)
Query: 120 KDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV 179
K+ E+ P ++ RL +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 119 KNIEFQFRDSPGFVDGRLRPYQVQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL 178
Query: 180 FGKDESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR--- 234
++K G L+I P S + NW E +RW+ N I G
Sbjct: 179 --------------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEGRA 224
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
++I +KL C +V++ S++ S L +++WE +I+DEAHR+KNE+S L E
Sbjct: 225 ELIQKKLLGCDFDVVVASYEIIIREKSPLKKIDWEYIIIDEAHRIKNEESMLSQVLREFT 284
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
+RNR+ +TGT +QN + EL+ L +++ P + F +++ + E
Sbjct: 285 SRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEED 333
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
D + L VL+ +LLRR K + L+ KE N ++ MS++QKR Y+++L+
Sbjct: 334 QDNIVRQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSNMQKRWYKKILE------ 386
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
KDL GS + E RL N+ +++L++ NH L
Sbjct: 387 ---KDLDAVNGSNGGK-ESKTRLLNI--------------MMQLRKCCNHPYLF------ 422
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
D + D L + + K+ L+KL+ +G +
Sbjct: 423 -------DGAEPGPPYTTDEHL---------------IYNAAKLLVLDKLLKKLKEEGSR 460
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
+L+FS R+LDILE + + Y + R+DGST R +DD+N S++ VFL++TRA
Sbjct: 461 VLIFSQMSRVLDILEDYCFFRKYDYCRIDGSTAHEDRIQAIDDYNEPDSEKFVFLLTTRA 520
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLG+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R
Sbjct: 521 GGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERA 580
Query: 654 VYKQQLSNIAV 664
K +L + +
Sbjct: 581 TQKLRLDQLVI 591
>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 797
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 289/573 (50%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + N +G I+ D+MGLGKT+Q I L
Sbjct: 191 KVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWT 250
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + E+ T+ K V+I CP++++ NW E +W N + G +
Sbjct: 251 LLKQSPEAGKPTVQK---------VVIACPATLVGNWANELVKWLGKDAVNPFVIDGKAS 301
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ + +L + VLI S+++ R++ L E +++ DE HRLKN +S+
Sbjct: 302 KAELTSQLRQWAIASGRQVVRPVLIVSYETLRLNVGELKETPIGLLLCDEGHRLKNGESQ 361
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ L+GT +QN + E Y+L ++ PG LG+R F + ++ P+ G+
Sbjct: 362 TFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGVLGSRSEFHKRFEMPILRGRDA 421
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E + DE L+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y
Sbjct: 422 DGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPV-KYEHVVFCNLAPFQMDLYNH 480
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q P+I+ L+ PL + K+L N P L+ L
Sbjct: 481 FIQSPDIKSLLRG----KGSQPLKAIGILKKLCN------------HPDLLNLSADLPGS 524
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
E + P+ P+ + +D DVKS GKM L++
Sbjct: 525 EQLFPDDYVPPEGRGRD---------------------------RDVKSWYSGKMMVLDR 557
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN
Sbjct: 558 MLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPD 617
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
++ VFL+S++AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 618 GEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 677
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
GS+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 678 TGSIEEKIFQRQSHKQLLSSCVVDSAEDVERHF 710
>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
VdLs.17]
Length = 822
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 296/578 (51%), Gaps = 77/578 (13%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
+GE+P +VP I+ RL + HQ EGVKF+YK + + +G I+ D+MGLGKT+Q
Sbjct: 252 EGEHP--KVPVVIDPRLCKVLRPHQIEGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQ 309
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
I L + + E+ S I K +++CPSS+++NW E +W +
Sbjct: 310 CITLLWTLLKQSPEAGKSAIQK---------AIVVCPSSLVKNWANELVKWLGADAVTPF 360
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L + V+I S+++ R++ L +++ DE HR
Sbjct: 361 AIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSYETLRLNVDELKHTKIGLMLCDEGHR 420
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S+ + + L RI L+GT +QN + E ++L + P LGTR FR+ ++ P
Sbjct: 421 LKNGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELP 480
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L+ ++ K+++RRT + +L + K ++VVFC ++
Sbjct: 481 ILRGRDADADETDRKKGDECLSELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 539
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y L P+IQ L L G S P L + L
Sbjct: 540 QLDLYNYFLTSPDIQAL------------------------LRGKGSQP----LKAINIL 571
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+++ NH +L+ N D S PD D V +A+ + S GKM
Sbjct: 572 KKLCNHPDLLNLN----------DDLPGSENCWPD-DYVPKDARGHRNREVKPWYS-GKM 619
Query: 519 RALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
+ L++++ DKI+L S + LDI E+ + Y RLDG+ N RQ LVD
Sbjct: 620 QVLDRMLARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDK 679
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN ++ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V
Sbjct: 680 FNDPTGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFV 739
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 740 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 777
>gi|320170477|gb|EFW47376.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1345
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 296/616 (48%), Gaps = 119/616 (19%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
VP + R+ HQREGV +LY L++ K GGILGDDMGLGKTIQ ++FL +F
Sbjct: 228 VPHATVERMFPHQREGVIWLYSLFQRKTGGILGDDMGLGKTIQIVSFLQGLFC------- 280
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDM-----ILEKLEA 243
+K K+ LI+ P +++ NW+ EF +W+ V+++ + D+ +L L
Sbjct: 281 -----SKQIKRA--LIVVPLALLDNWKKEFEKWAP-EVAVWQFHDGDLKQRHQVLRSLRK 332
Query: 244 CGVEVLIT------------SFDSYRIHGSILSE--VNWEIVIVDEAHRLKNEKSKLYMA 289
G L T + D GS S+ W+ +I+DE HR+KN +KL A
Sbjct: 333 RGGVCLTTYGIVCSRNDGLRTIDERVDGGSAQSDDSTVWDCMILDEGHRIKNCNTKLARA 392
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL-GTREHFREFYDEPLKHGQRLTAP 348
+ ++ L+GT +QN + E++ LF++V G L GT + F + +++P+ +A
Sbjct: 393 VYNIMATTKVILSGTPIQNNLKEMWALFNFVCDGKLLGTIQSFGKLFNQPIVQASDKSAT 452
Query: 349 ERFIRIADERKQ--HLVAVLRK----YLLRRTKEE-----------------------TI 379
+ ER Q + AVLR Y LRR K++ TI
Sbjct: 453 DA------ERLQGATVAAVLRDRIAPYFLRREKKQVLHADDGTVFAAQAAADLADAPGTI 506
Query: 380 GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDN 439
+ K+D +V+ ++ Q + Y L+ +I LIN+ GS
Sbjct: 507 AIKLERKDDLIVWLKLAQPQLKLYTAFLENTDIDELINE------GS------------- 547
Query: 440 LDGCDSCPFCLVLPCLVKLQQISNHLELIK--PNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL LV L+++ +H +L+K N D D + A+ +
Sbjct: 548 ----------TVLSALVMLKKLCDHPQLLKLTTNKSDTKDLRILAAKKCDDDDEDEERQQ 597
Query: 498 GGNAQNESFIGL------------------SDVKSCGKMRALEKLMYSWASKGDKILLFS 539
L +++ K+ L L + G ++L+FS
Sbjct: 598 ERQTARAKLTALEVKKLWQSFLPRTAEQIEDTIQASVKLSFLTTLCENLKQDGHRVLIFS 657
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S RMLD++++ L + YS R+DGS + RQ +D FN+ S FL++T+ GG+G+
Sbjct: 658 QSTRMLDLIQEVLTYQKYSLIRIDGSVTGHERQHRIDKFNTDDSIFGFLLTTQVGGVGIT 717
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L SA+RV+I DP+WNPA D QA DR++R GQ R+V+++RL++ G++EE +Y RQVYK
Sbjct: 718 LTSADRVIIVDPSWNPAIDTQAVDRAYRIGQTRNVVIYRLITCGTIEEKIYCRQVYKSDF 777
Query: 660 SNIAVSGKLEKRYFEG 675
S++ + R+F+
Sbjct: 778 SHVMIDKHAPSRHFDA 793
>gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi]
Length = 875
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 211/731 (28%), Positives = 337/731 (46%), Gaps = 126/731 (17%)
Query: 2 MSLLRSFKESLKPCSNFPSNFSQSSSVSQESSNDTLIIPR--RPPKSSLAQQLQR----- 54
+ +L ES +P SN N + ++ IPR +PP +S QR
Sbjct: 113 VEVLERITESTEPVSNCSKNVASANK-----------IPRILKPPSTSFKAPEQRKTAPD 161
Query: 55 -----------LGETYNFSLPQQNPET--RREKAPVEKSNVFDDEEKEKEQE--QEKFGR 99
L E +F+ P R+ P+ D+ K + E + F +
Sbjct: 162 QLQPDISSHDSLTEKDSFTKVDTTPSVPVNRQFKPIATYTAPDEGSKNDQAEVVEPLFMK 221
Query: 100 HQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNK---- 155
+ +F H P L ++ +QVPA + L HQR+GV FLY+
Sbjct: 222 KPSFEHRFHH-NPNNELTVAD------VQVPACLARHLRPHQRDGVAFLYECVTGMRMME 274
Query: 156 -----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDK--KGYVLIICPS 208
+G IL D+MGLGKT+Q I+ + T+LK K +LI+ PS
Sbjct: 275 PPGGYYGAILADEMGLGKTLQCISLMY-----------TLLKTGPYGKPLARRILIVTPS 323
Query: 209 SVIQNWEIEFSRWS------TFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSI 262
S+++NW+ E ++W TF V GP+ + L ++ + VLI S++
Sbjct: 324 SLVENWDREITKWLRNERLFTFIV----GPHNKLRLYA-QSLHIPVLIISYEMLAKQIDE 378
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
L V ++++ DE HRLKN K++ +L+ R R+ +TGT +QN + E Y+L ++V P
Sbjct: 379 LETVKFDLIFCDEGHRLKNSNVKVFGVLSKLECRRRVLITGTPIQNDLAEFYSLINFVNP 438
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LG+ + F+ Y+ P+ QR + I + ER L + +++LRRT +E I
Sbjct: 439 GLLGSYQDFKARYETPIIISQRPGVLPQSIELGIERLNELNVITGRFVLRRT-QEVINRY 497
Query: 383 MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDG 442
+ K + V+FC S+LQ + R L E + G
Sbjct: 498 LPEKHELVIFCHPSELQTQLLRTALTFYE--------------------------EERSG 531
Query: 443 CDS-CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
++ P L+ L++I NH L+K R +P+ LA + PD +G +
Sbjct: 532 SNAITPLQLI----TILKKICNHPSLVKVTGRGDPESLLH--RLADQL--PDWQAMGPS- 582
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
K+ ++ L+ K +K+++ SY + LD++ Y SR
Sbjct: 583 ------------DSAKLAIVDTLLEDLIVKQEKVVIVSYYNKTLDMIAGLCEHYNYKHSR 630
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQ 620
LDGST ++ R +V FN++ S + L+S +AGG GLNL+ A+R+V++D +WNPA DLQ
Sbjct: 631 LDGSTVASDRSKIVATFNNAASDIFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQ 690
Query: 621 AQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCK 680
A R +R GQ R V ++RLL+A S+EE ++ RQ+ K LS V +KR +Q
Sbjct: 691 AMSRVWRDGQTRTVFIYRLLTAFSIEERIFQRQISKTSLSGTVVD---QKRNMNNLQFSD 747
Query: 681 EFQGELFGICN 691
E +LF +
Sbjct: 748 EELKDLFSFVD 758
>gi|440906247|gb|ELR56532.1| DNA repair and recombination protein RAD54B [Bos grunniens mutus]
Length = 911
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 278/540 (51%), Gaps = 52/540 (9%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + I+
Sbjct: 296 LRPHQKEGITFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIV 355
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S++ NW+ EF +W + I+ + E ++ VLI
Sbjct: 356 KK--------TLIVTPGSLVNNWKKEFQKWLGIERIKIFTVDQDHKVEEFTKSPFYSVLI 407
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + V ++++I DE HRLKN K A + L RI LTGT +QN +
Sbjct: 408 ISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSTIKTTTALISLSCEKRIILTGTPVQNDL 467
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + L D+V PG LG+ +R+ Y+EP+ ++ +A E + ++R L + ++
Sbjct: 468 QEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFI 527
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K +NVVFC LQ YR+LL ++ + L + S L
Sbjct: 528 LRRT-QEVINQYLPPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQGLLENT--SHLIC 584
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
+ K+L N PCL + ++ + N + ++R E VF
Sbjct: 585 IGALKKLCN------------HPCL-----LFGSIKEKESNSTWDESEERNLYEGLMNVF 627
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS-----KGDKILLFSYSVRML 545
D + + + + GK++ L KL+ +G +L+ +Y+ R L
Sbjct: 628 PADYNPI-----------MFTEEESGKLQVLSKLLAVIRELRPEVRGQVVLVSNYT-RTL 675
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSAN 604
DIL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ +
Sbjct: 676 DILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGS 735
Query: 605 RVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS +
Sbjct: 736 HLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVI 795
>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
Length = 807
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 300/583 (51%), Gaps = 90/583 (15%)
Query: 122 GEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQT 172
GE+P +VP I+ +L + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q
Sbjct: 201 GEHP--RVPVVIDPKLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQC 258
Query: 173 IAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSI 228
I L + + + T ++ ++ CPSS+++NW E ++W + +I
Sbjct: 259 ITLLWTLLKQSPDAGKTTIQK--------AIVACPSSLVRNWANELTKWLGADAITPFAI 310
Query: 229 YHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLK 280
+++ + +L + V+I S+++ R++ L +++ DE HRLK
Sbjct: 311 DGKASKEELTRQLRQWAIASGRAITRPVIIVSYETLRLNVEELKNTPIGLMLCDEGHRLK 370
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK 340
N S+ + A L R+ L+GT +QN + E ++L + P LG+R FR+ ++ P+
Sbjct: 371 NGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSLISFANPDLLGSRLEFRKRFELPIL 430
Query: 341 HGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQK 400
G+ A E + DE L+A++ K+++RRT + +L + K ++VVFC ++ Q+
Sbjct: 431 RGRDADASEAERKRGDECLAELLAIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQQ 489
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
Y + P+IQ L L G S P L + L++
Sbjct: 490 ALYNYFITSPDIQAL------------------------LRGKGSQP----LKAIGILKK 521
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELASAVFG-----PDIDLVGGNAQNESFIGLSDVKS- 514
+ NH +L+ +LA+ + G PD D V A+ D+K
Sbjct: 522 LCNHPDLL---------------DLAADLPGCEQYWPD-DYVPKEARGRD----RDIKPW 561
Query: 515 -CGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
GKM+ L++++ A DKI+L S + LD+ E+ +GY RLDG+ N RQ
Sbjct: 562 YSGKMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRSRGYGCLRLDGTMNVNKRQ 621
Query: 573 SLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
LVD FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK
Sbjct: 622 KLVDKFNDPDGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQK 681
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+ V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 682 KDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 724
>gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97]
Length = 1004
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 278/540 (51%), Gaps = 68/540 (12%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 252 LREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 306
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-GVEVL 249
V KK LI+CP ++I NW+ EF +W + + ++ + L V+
Sbjct: 307 GSQPVIKKA--LIVCPVTLINNWKKEFKKWLGSDRIGVFVAEGKGNRLSDFTMGRSYSVM 364
Query: 250 ITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R + + +IV+ DE HRLK ++K A L T RI L+GT +QN
Sbjct: 365 IIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQN 424
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
++ E + + D+V P LGT + F ++ P+ ++ AP++ I R + L +
Sbjct: 425 ELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSP 484
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + HL K + ++FC + Q+ Y +L P Q ++ + S L
Sbjct: 485 FILRRTADILSKHL-PPKTEYILFCNPTSAQRNVYHHVLASPLFQSVLR-----NSESTL 538
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ K++ C+S P L+K P+ E + + +D+ +++
Sbjct: 539 QLITILKKV-----CNS-------PSLLK--------------PKVEDNGKGEDSSMSAF 572
Query: 489 V--FGPDID--LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYSVR 543
+ P+I L G S GK+R L++L+Y+ SK +K++L S
Sbjct: 573 ISSLPPNIHRCLAAG--------------SSGKIRVLDQLLYNLQSKTTEKVVLVSNYTS 618
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLV 601
L++L L F RLDGSTP+ RQ+LV+DFN SPS FL+S +AGG GLNL+
Sbjct: 619 TLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNLI 678
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
A+R+V+FD +WNPA D+QA R R GQKRH ++RLL G +EE ++ RQV K L++
Sbjct: 679 GASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLAD 738
>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
Length = 808
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 289/571 (50%), Gaps = 76/571 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + KN HG I+ D MGLGKT+Q I +
Sbjct: 202 KVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQCITLMWT 261
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PN 233
+ + E+ T+ K +I CP++++ NW E +W N + G +
Sbjct: 262 LLKQSPEAGKPTVQK---------AVIACPATLVGNWANELVKWLGKDAINPFVIDGKAS 312
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ + +L + VLI S+++ R++ L + +++ DE HRLKN S+
Sbjct: 313 KTELTSQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQ 372
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
Y+A +L + R+ L+GT +QN + E ++L D+ PG LG+R F + Y+ P+ G+
Sbjct: 373 TYVALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDA 432
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
+ + +ER L+ ++ K+++RR+ + +L + K ++VVFC +S Q Y
Sbjct: 433 DGTDEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPV-KYEHVVFCNLSPFQLDLYNH 491
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q PEI+ L L G S P L + L+++ NH
Sbjct: 492 FIQSPEIKSL------------------------LRGKGSQP----LKAIGILKKLCNHP 523
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
+L+K + +D F D+ + G + + GKM L++++
Sbjct: 524 DLLKLS---------EDLPGCEQYFPEDMTVSNGRRGDRE----AKTWYSGKMMVLDRML 570
Query: 526 YSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
DKI+L S + LD+ E+ + Y RLDG+ R LVD FN +
Sbjct: 571 ARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGE 630
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ VFL+S++AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQ + V+R ++ G
Sbjct: 631 EFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATG 690
Query: 644 SLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
++EE ++ RQ +KQ LS+ + S + +R+F
Sbjct: 691 TIEEKIFQRQSHKQSLSSCVIDSAEDVERHF 721
>gi|45199055|ref|NP_986084.1| AFR537Wp [Ashbya gossypii ATCC 10895]
gi|44985130|gb|AAS53908.1| AFR537Wp [Ashbya gossypii ATCC 10895]
Length = 1025
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 304/591 (51%), Gaps = 102/591 (17%)
Query: 95 EKFGRHQLGQFQFDHTGPFEPLVLSKDGEY-----------PIIQVPASINC-RLLEHQR 142
E+ GR GQ Q D + F +D E + + P+ + +L ++Q
Sbjct: 74 EERGRSSRGQRQKDSSRHFRKTEKEEDAELMQDEEQHMETTVVTESPSFVKAGKLRDYQI 133
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDESSDSTILKDNKVDKKGY 201
G+ +L L++NK GIL D+MGLGKT+QTI+FL + F KD +D G
Sbjct: 134 YGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRFIKD------------ID--GP 179
Query: 202 VLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLITSFDSYR 257
+++ P S + NW+ EF++W+ N + HG +I E++ C +VLITS++
Sbjct: 180 FIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQLIEERILTCDFDVLITSYEMVI 239
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+IL + W+ +++DEAHR+KNE+S L +++R+ +TGT +QN + EL+ L
Sbjct: 240 KEKAILKKFAWQYIVIDEAHRIKNEQSTLSQIIRLFYSKSRLLITGTPLQNNLHELWALL 299
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
+++ P G E F E++ + K A ++ I + Q L AVL+ +LLRR K +
Sbjct: 300 NFLLPDVFGESEVFDEWFQQNEK------AQDQEIVV-----QQLHAVLQPFLLRRVKAD 348
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
L+ E N V+ M+ +Q + YR LL+ KD+ G+ + + E RL
Sbjct: 349 VEKSLLPKIETN-VYVGMTAMQLQWYRSLLE---------KDIDAVNGA-VGKREGKTRL 397
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAELASAVFGPDI 494
N+ +++L++ NH E +P P D+
Sbjct: 398 LNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-------------- 429
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
+ + GKM L+KL+ +G ++L+FS R+LDILE +
Sbjct: 430 -----------------IYNSGKMIVLDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYF 472
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNW 613
+ + + R+DG+T R + +D+FN+ SK+ +FL++TRAGGLG+NLV+A+ VV++D +W
Sbjct: 473 RDFEYCRIDGATSHEERIAAIDEFNAHDSKKFIFLLTTRAGGLGINLVTADTVVLYDSDW 532
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
NP DLQA DR+ R GQK+ V V+RL++ ++EE V R K +L + +
Sbjct: 533 NPQADLQAMDRAHRIGQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVI 583
>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 831
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 317/622 (50%), Gaps = 88/622 (14%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSKD-GEYPIIQVPASINCRLL 138
+++E+ KE + K G+ ++ Q + D H E L + K+ E P +VP I+ RL
Sbjct: 179 NNKEENKENSENKDGK-EVEQKKLDQPLVHKSLAEILGIKKNVDERP--KVPVVIDPRLA 235
Query: 139 E----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDS 188
+ HQ EGVKFLY+ + KN +G I+ D MGLGKT+Q I + + + E+
Sbjct: 236 KILRPHQIEGVKFLYRCTTGLVDKNANGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKP 295
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHG-PNRDMILEKLEAC 244
T+ K +I CP++++ NW E +W N + G ++ ++ +L
Sbjct: 296 TVQK---------AVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKAELISQLRQW 346
Query: 245 GVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ VLI S+++ R++ L + +++ DE HRLKN S+ Y+A +L +
Sbjct: 347 AIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQ 406
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E ++L D+ PG LG+R F + Y+ P+ G+ + + +
Sbjct: 407 KRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQQKGN 466
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
ER L+ ++ K+++RR+ + +L + K ++VVFC ++ Q Y +Q PEI+ L
Sbjct: 467 ERLAELLNLVNKFIIRRSNDLLSKYLPV-KYEHVVFCNLAPFQLDLYNHFIQSPEIKSL- 524
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G S P L + L+++ NH +L+K +
Sbjct: 525 -----------------------LRGKGSQP----LKAIGILKKLCNHPDLLKLS----- 552
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASKGD 533
+D F D+ + G G +VKS GKM L++++ D
Sbjct: 553 ----EDLPGCEQYFPEDMTVSNGRR------GDREVKSWYSGKMMVLDRMLARIRQDTND 602
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
KI+L S + LD+ E+ + Y RLDG+ R LVD FN ++ VFL+S++
Sbjct: 603 KIVLISNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSK 662
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NLV ANR+V+FDP+WNPA D QA R +R GQ + V+R ++ G++EE ++ R
Sbjct: 663 AGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIEEKIFQR 722
Query: 653 QVYKQQLSNIAV-SGKLEKRYF 673
Q +KQ LS+ V S + +R+F
Sbjct: 723 QSHKQSLSSCVVDSAEDVERHF 744
>gi|426248049|ref|XP_004017778.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Ovis aries]
Length = 1827
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 480 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 532
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 533 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 586
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 587 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 646
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 647 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 690
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 691 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 748
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 749 G-------------------------FLNIVMELKKCCNHCHLIKPPEENE--------- 774
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N + LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 775 ----------------RENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 818
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 819 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 878
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 879 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 938
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 939 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 982
>gi|374109315|gb|AEY98221.1| FAFR537Wp [Ashbya gossypii FDAG1]
Length = 1025
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 304/591 (51%), Gaps = 102/591 (17%)
Query: 95 EKFGRHQLGQFQFDHTGPFEPLVLSKDGEY-----------PIIQVPASINC-RLLEHQR 142
E+ GR GQ Q D + F +D E + + P+ + +L ++Q
Sbjct: 74 EERGRSSRGQRQKDSSRHFRKTEKEEDAELMQDEEQHMETTVVTESPSFVKAGKLRDYQI 133
Query: 143 EGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGKDESSDSTILKDNKVDKKGY 201
G+ +L L++NK GIL D+MGLGKT+QTI+FL + F KD +D G
Sbjct: 134 YGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRFIKD------------ID--GP 179
Query: 202 VLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLITSFDSYR 257
+++ P S + NW+ EF++W+ N + HG +I E++ C +VLITS++
Sbjct: 180 FIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQLIEERILTCDFDVLITSYEMVI 239
Query: 258 IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLF 317
+IL + W+ +++DEAHR+KNE+S L +++R+ +TGT +QN + EL+ L
Sbjct: 240 KEKAILKKFAWQYIVIDEAHRIKNEQSTLSQIIRLFYSKSRLLITGTPLQNNLHELWALL 299
Query: 318 DWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEE 377
+++ P G E F E++ + K A ++ I + Q L AVL+ +LLRR K +
Sbjct: 300 NFLLPDVFGESEVFDEWFQQNEK------AQDQEIVV-----QQLHAVLQPFLLRRVKAD 348
Query: 378 TIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
L+ E N V+ M+ +Q + YR LL+ KD+ G+ + + E RL
Sbjct: 349 VEKSLLPKIETN-VYVGMTAMQLQWYRSLLE---------KDIDAVNGA-VGKREGKTRL 397
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAELASAVFGPDI 494
N+ +++L++ NH E +P P D+
Sbjct: 398 LNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-------------- 429
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
+ + GKM L+KL+ +G ++L+FS R+LDILE +
Sbjct: 430 -----------------IYNSGKMIVLDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYF 472
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNW 613
+ + + R+DG+T R + +D+FN+ SK+ +FL++TRAGGLG+NLV+A+ VV++D +W
Sbjct: 473 RDFEYCRIDGATSHEERIAAIDEFNAHDSKKFIFLLTTRAGGLGINLVTADTVVLYDSDW 532
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
NP DLQA DR+ R GQK+ V V+RL++ ++EE V R K +L + +
Sbjct: 533 NPQADLQAMDRAHRIGQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVI 583
>gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 1842
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 299/623 (47%), Gaps = 103/623 (16%)
Query: 99 RHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINC-RLLEHQREGVKFLYKLYKNKHG 157
R Q Q HTG P + G + P IN +L ++Q EG+ +L +KN
Sbjct: 672 RQQAAQSNSKHTGGVSPKKRLEQGFVKFEEQPDWINAGKLRDYQMEGLNWLVHSWKNNTN 731
Query: 158 GILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIE 217
IL D+MGLGKTIQTI+F++ +F N + G L++ P S I+NW E
Sbjct: 732 VILADEMGLGKTIQTISFISYLF-------------NVQNLSGPFLVVVPLSTIENWHRE 778
Query: 218 FSRWS-TFNVSIYHG--PNRDMILE---------KLEACGVEVLITSFDSYRIHGSILSE 265
F++W+ N+ +Y G +RD+I + + VL+T++D + L
Sbjct: 779 FTKWAPKMNLIVYTGSSASRDIIRQFEFYQPTRFGKKKISFNVLLTTYDFILKDKNYLGA 838
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
+ WE + VDEAHRLKN +S L+ T NR+ +TGT +QN + EL+NL +++ P
Sbjct: 839 IKWEYLAVDEAHRLKNNESMLHEVLKYFHTSNRLLVTGTPLQNSLKELWNLLNFLMPNKF 898
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
+ + F++ Y + LK ++ L VL+ +LLRR K+E + +
Sbjct: 899 HSLDEFQDQYAD-LKEKDQIA--------------ELHNVLKPHLLRRIKKE-VEKSLPA 942
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + ++ +S QK+ YR +L K L+
Sbjct: 943 KTERILRVDLSPTQKKYYRWIL--------------------------SKNFHELNKGVK 976
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
+L + +L++ NH L ++AE DL N +
Sbjct: 977 GEKTTLLNIVAELKKTCNHPYLF------------ENAE----------DLNAENPLD-- 1012
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
+ VK+ GK+ L+KL+ G ++L+FS VRMLDIL +L +G+ F RLDGS
Sbjct: 1013 ----AMVKASGKLILLDKLLVRLKETGHRVLIFSQMVRMLDILADYLKGRGFLFQRLDGS 1068
Query: 566 TPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
T R +D FN+ S FL+STRAGGLG+NL +A+ V+IFD +WNP DLQA+ R
Sbjct: 1069 TSREKRSQAMDRFNAEGSPDFAFLLSTRAGGLGINLSTADTVIIFDSDWNPQNDLQAEAR 1128
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQG 684
+ R GQK V ++RL+S ++EE + R K L ++ + +EK + +
Sbjct: 1129 AHRIGQKNTVNIYRLVSKSTIEEEILERAKQKMVLDHLVIQS-MEKSSTKTTSSNVFNKE 1187
Query: 685 EL-----FGICNLFRDLSDNLFT 702
EL FG +LF++ +N T
Sbjct: 1188 ELDAILKFGAEDLFKEGDENSNT 1210
>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 864
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 294/573 (51%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKF+Y+ + N +G I+ D+MGLGKT+Q IA +
Sbjct: 262 KVPVVIDPRLSKVLRPHQIEGVKFMYRCVTGMIEDNANGCIMADEMGLGKTLQCIALMWT 321
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + E+ TI K +I CPSS+++NW E +W + +I +
Sbjct: 322 LLKQSPEAGKPTIQK---------AIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKAS 372
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
++ + ++L + V+I S+++ R++ L +++ DE HRLKN S+
Sbjct: 373 KEELQQQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKNTKIGLMLCDEGHRLKNGDSQ 432
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ L+GT +QN + E ++L + PG LGTR FR+ Y+ P+ G+
Sbjct: 433 TFTALNGLNVSRRVILSGTPIQNDLTEYFSLISFANPGLLGTRMEFRKKYELPILKGRDA 492
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
++ + D+ + L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y
Sbjct: 493 AGSDKDRQKGDDTVRELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNH 551
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ P+I+ L L G S P L + L+++ NH
Sbjct: 552 FISSPDIKAL------------------------LRGKGSQP----LKAIGLLKKLCNHP 583
Query: 466 ELIKPNPRDEP--DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
+L+ P D P DK D + G D D+ + GKM+ L++
Sbjct: 584 DLLN-LPEDLPGCDKYLPDDYVPKESRGRDRDIRPWYS--------------GKMQVLDR 628
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S + LD+ +K +GY RLDG+ RQ LVD FN+
Sbjct: 629 MLARIRQDTNDKIVLISNYTQTLDMFDKLCRDRGYGSLRLDGTMNVTKRQKLVDRFNNPE 688
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
+ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 689 GSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 748
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 749 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 781
>gi|26350025|dbj|BAC38652.1| unnamed protein product [Mus musculus]
Length = 467
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 243/432 (56%), Gaps = 17/432 (3%)
Query: 171 QTIAFLAAVFGKDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFS 219
+ I+FLAAV K + + +LK K K LI+ P SV+ NW+ E
Sbjct: 41 KVISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELD 100
Query: 220 RWSTFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
W F V++ HG +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+
Sbjct: 101 TWGYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRI 160
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
KN K+++ +K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P+
Sbjct: 161 KNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPV 220
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+HGQR TA +R + + L + + LRRTK G L KED +V+C+++D Q
Sbjct: 221 EHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQL-PKKEDRMVYCSLTDFQ 279
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
K Y+ +L+ ++ ++ PC+CGS + +CC + N G CL L LQ
Sbjct: 280 KAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQ 336
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+++NH+ L++ + ++ + VF D V +++ +F LSD K GKM+
Sbjct: 337 KVANHVALLQAASTSK-HQETVIKRICDRVFSRFPDFV-QKSKDAAFETLSDPKYSGKMK 394
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN 579
L++L+ + + DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FN
Sbjct: 395 VLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFN 454
Query: 580 SSPSKQVFLIST 591
SS + L+ST
Sbjct: 455 SSQDVNICLVST 466
>gi|408399605|gb|EKJ78703.1| hypothetical protein FPSE_01071 [Fusarium pseudograminearum CS3096]
Length = 1427
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 289/558 (51%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +
Sbjct: 544 VGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLLERKQ-------- 595
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF RW+ T N +Y GP R + +++ G +VL
Sbjct: 596 -----QPGPYLVIVPLSTLTNWNLEFERWAPTINRIVYKGPPNTRKLQQDRIRQGGFQVL 650
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN SKL Y TR R+ LTGT +QN
Sbjct: 651 LTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSYTIQQYYHTRFRLILTGTPLQN 710
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + F E+++ P + GQ LT E+ + I + L
Sbjct: 711 NLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 765
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ + Y+ Q + + L S
Sbjct: 766 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQSKLYK--------QMVTHNKLVVS 816
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH +
Sbjct: 817 DGK--GGKTGARGLSNM--------------IMQLRKLCNHPFVF--------------- 845
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ V P N N+ ++ GK L++++ + + G ++L+F
Sbjct: 846 DVVENVMNP------LNISNDLLW-----RTSGKFELLDRILPKYQATGHRVLMFFQMTA 894
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E +L + + RLDG+T S+ R L+ +FN+ SK +FL+STRAGGLGLNL +
Sbjct: 895 IMDIMEDYLRYRRVEYLRLDGTTKSDERSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT 954
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 955 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGK 1014
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1015 VIQAGRFDNKSSETDRDA 1032
>gi|154316737|ref|XP_001557689.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10]
Length = 1130
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 275/543 (50%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PGFIQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ +D G LI+ P S + NW+ EF RW+ NV + G + +I E+L
Sbjct: 229 ---RHIMDITGPHLIVVPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNLINERLIDEK 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V IT ++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITRYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ+ D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDAEAFDQWFS-----GQQ--------EDQDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MSD+Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKADVEKSLLPKKEVN-LYIGMSDMQVKWYKKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 484
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF + GKM L+KL+ G ++L+FS
Sbjct: 485 -----LVF-----------------------NAGKMVMLDKLLTRMKKAGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R +DD+N S++ VFL++TRAGGLG+NL
Sbjct: 517 RLLDILEDYCVFREYKYCRIDGGTAHEDRIQAIDDYNKPDSEKFVFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 577 SADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQ 636
Query: 662 IAV 664
+ +
Sbjct: 637 LVI 639
>gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gibberella zeae PH-1]
Length = 1427
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 289/558 (51%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +
Sbjct: 544 VGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQ-------- 595
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF RW+ T N +Y GP R + +++ G +VL
Sbjct: 596 -----QPGPYLVIVPLSTLTNWNLEFERWAPTINRIVYKGPPNTRKLQQDRIRQGGFQVL 650
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN SKL Y TR R+ LTGT +QN
Sbjct: 651 LTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSYTIQQYYHTRFRLILTGTPLQN 710
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + F E+++ P + GQ LT E+ + I + L
Sbjct: 711 NLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 765
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ + Y+ Q + + L S
Sbjct: 766 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQSKLYK--------QMVTHNKLVVS 816
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH +
Sbjct: 817 DGK--GGKTGARGLSNM--------------IMQLRKLCNHPFVF--------------- 845
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ V P N N+ ++ GK L++++ + + G ++L+F
Sbjct: 846 DVVENVMNP------LNISNDLLW-----RTSGKFELLDRILPKYQATGHRVLMFFQMTA 894
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E +L + + RLDG+T S+ R L+ +FN+ SK +FL+STRAGGLGLNL +
Sbjct: 895 IMDIMEDYLRYRRVEYLRLDGTTKSDERSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT 954
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 955 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGK 1014
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1015 VIQAGRFDNKSSETDRDA 1032
>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
Length = 803
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 310/625 (49%), Gaps = 88/625 (14%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINC 135
DD KE E+ E+ + Q + D H E L + K +GE+P +VP I+
Sbjct: 151 TVDDRPKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDP 208
Query: 136 RLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 209 RLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEA 268
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL 241
I K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 269 GKPAIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 319
Query: 242 EACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 320 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 379
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R+ L+GT +QN + E ++L + P LGTR FR+ ++ P+ G+ A E+
Sbjct: 380 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 439
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
DE + L+A++ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ
Sbjct: 440 KGDECLKELLALVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITSPDIQ 498
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L L G S P L + L+++ NH +L+
Sbjct: 499 AL------------------------LRGKGSQP----LKAIGILKKLCNHPDLL----- 525
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-AS 530
L+ + G + ES ++K GKM+ L++++ A
Sbjct: 526 ----------NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVLDRMLARIRAD 575
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI+L S LD+ E+ +GY RLDG+ RQ LVD FN + VFL+
Sbjct: 576 TNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLL 635
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE +
Sbjct: 636 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKI 695
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYF 673
+ RQ +KQ LS+ V S + +R+F
Sbjct: 696 FQRQSHKQSLSSCVVDSAEDVERHF 720
>gi|294656285|ref|XP_458541.2| DEHA2D01672p [Debaryomyces hansenii CBS767]
gi|199431348|emb|CAG86673.2| DEHA2D01672p [Debaryomyces hansenii CBS767]
Length = 1041
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 277/536 (51%), Gaps = 82/536 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTIAFL + +K K+
Sbjct: 132 LREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTIAFLGYL---------RYIK--KI 180
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNR---DMILEKLEACGVEVLITS 252
D G +II P S + NW EF++W+ NV + G ++I KL +VLITS
Sbjct: 181 D--GPFIIIVPKSTLDNWRREFAKWTPDVNVIVLQGNKEGRNEVIQNKLLNAEFDVLITS 238
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
F+ + L + WE ++VDEAHR+KNE S L ++NR+ +TGT +QN + E
Sbjct: 239 FEMVIREKAHLKKFRWEYIVVDEAHRIKNEDSSLSQILRLFYSKNRLLITGTPLQNNLHE 298
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L+ L +++ P G E F E+++ Q E + D+ Q L VL +LLR
Sbjct: 299 LWALLNFLLPDVFGDSEVFNEWFE-----NQGGKTDEDKEKNQDKVIQQLHKVLSPFLLR 353
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K + L+ E N ++ M+D+Q + Y++LL+ KD+ G + + E
Sbjct: 354 RIKADVEKSLLPKIETN-IYIGMADMQIKWYKKLLE---------KDIDAVNGV-VGKRE 402
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELASAV 489
RL N+ +++L++ NH L +P P D+ V
Sbjct: 403 GKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGPPYTTDEH--------LV 440
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
F + GKM L+K++ + +G ++L+FS R+LDILE
Sbjct: 441 F-----------------------NAGKMIILDKMLKKFKKEGSRVLIFSQMSRLLDILE 477
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANRVVI 608
+ + YS+ R+DGST R +D +N S K +FL++TRAGGLG+NL SA+ V++
Sbjct: 478 DYCYLRDYSYCRIDGSTSHEDRIEAIDQYNMPDSDKFIFLLTTRAGGLGINLTSADIVIL 537
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L + +
Sbjct: 538 YDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVI 593
>gi|403352061|gb|EJY75536.1| Helicase [Oxytricha trifallax]
Length = 1177
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 280/527 (53%), Gaps = 84/527 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q EG+ +LYKL + K GIL D+MGLGKTIQ+IA +A V +S ++ +
Sbjct: 133 LRDYQVEGLNWLYKLQQTKLNGILADEMGLGKTIQSIAIMALV-------ESFKTQEQRE 185
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEA--CGVEVLITSF 253
+K + ++I P V+ W E W + + ++G N + ++K E ++++T+F
Sbjct: 186 SRKTHHIVIVPKIVLGKWNKEIQEWVPSLRLKQFYGSNEEREIQKQEMRQHQFDIMLTTF 245
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
++ LS+ ++E +I+DEA R+KN++S L + KT++RI LTGT +QN + EL
Sbjct: 246 ETVIREKGELSKYHFEFLILDEAQRIKNDESVLSQVLRKFKTQHRILLTGTPLQNNLKEL 305
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ L +++ P + E F+E + + + A E+ IR + +LR ++LRR
Sbjct: 306 WALLNFLMPKLFDSAEEFKELF---MIKNEYEGAQEQIIR-------QIHRLLRPFMLRR 355
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
K + +L KE +F +S LQK+ Y+ +L N D+ G +
Sbjct: 356 LKVDVEKNLPTKKEI-YLFIGLSKLQKQLYKNIL-------TGNIDVVNGVGDKIK---- 403
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAELASAVF 490
+L L++L+++ NH + ++P P
Sbjct: 404 -----------------LLNVLMQLKKVCNHPYLFDKVEPGP------------------ 428
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
P +D G + +C K + L+ L+ ++G KIL+FS R+LDIL+
Sbjct: 429 -PFLD------------GEHLIDNCMKFKVLDLLVPKLLNQGCKILIFSQMTRLLDILDD 475
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANRVVIF 609
FL +GY + R+DG T +N R+ +++F + S KQ+F++STRAGGLG+NL SAN V+IF
Sbjct: 476 FLRFRGYQYCRIDGQTSANDREIRIEEFQKADSTKQLFILSTRAGGLGINLHSANVVIIF 535
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
D +WNP DLQA DR+ R GQKR V+V+R ++ GS+EE + R K
Sbjct: 536 DSDWNPQVDLQAIDRAHRIGQKRDVVVYRFVTEGSVEEKIVERAARK 582
>gi|255947266|ref|XP_002564400.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591417|emb|CAP97647.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1100
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I+ L ++Q GV +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 185 PAFIHGELRDYQVAGVNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------R 235
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
++D G L++ P S + NW+ EF++W+ +V + G + +I E+L
Sbjct: 236 YIRD----INGPHLVVVPKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQLINERLVEEE 291
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 292 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQIIRLFNSRNRLLITGTP 351
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ D Q L V
Sbjct: 352 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQDSD-------------QDAVVQQLHRV 398
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MS++Q+R Y+++L+ KD+ G
Sbjct: 399 LRPFLLRRVKSDVEKSLLPKKELN-LYVPMSEMQRRWYQKILE---------KDIDAVNG 448
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 449 AA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 490
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF + GKM L+KL+ + G ++L+FS
Sbjct: 491 -----LVF-----------------------NSGKMVILDKLLKRMQADGSRVLIFSQMS 522
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + Y++ R+DG+T R + +DD+N S K VFL++TRAGGLG+NL
Sbjct: 523 RVLDILEDYCCFRDYNYCRIDGTTAHEDRIAAIDDYNKPGSDKFVFLLTTRAGGLGINLT 582
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ VV+FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R K +L
Sbjct: 583 SADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITEKAIEEKVLERAAQKLRLDQ 642
Query: 662 IAV 664
+ +
Sbjct: 643 LVI 645
>gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca]
Length = 1133
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 461 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 513
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 514 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 567
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 568 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 627
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 628 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 671
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 672 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 729
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 730 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 755
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N + LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 756 ----------------RENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 799
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 800 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 859
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 860 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 919
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 920 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 963
>gi|389640599|ref|XP_003717932.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|351640485|gb|EHA48348.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|440471071|gb|ELQ40108.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
Y34]
gi|440481393|gb|ELQ61986.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
P131]
Length = 1128
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 275/543 (50%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G L+I P S + NW+ EF +W+ NV + G + +I E+L
Sbjct: 229 ---RHIMGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAERLVDES 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN I EL+ L +++ P G E F +++ GQ +D Q L V
Sbjct: 346 LQNNIHELWALLNFLLPDVFGDSEAFDQWFS---GEGQD----------SDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ M+++Q+ Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKADVEKSLLPKKEVN-LYLKMTEMQRTWYQKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AN-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 485
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ ++G ++L+FS
Sbjct: 486 -----------------------------VYNSGKMVVLDKLLKRLKAQGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y +SR+DG T R + +D++N S++ VFL++TRAGGLG+NL
Sbjct: 517 RVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V++FD +WNP DLQA DR+ R GQ + V V+R L ++EE V R K L
Sbjct: 577 TADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDR 636
Query: 662 IAV 664
+ +
Sbjct: 637 LVI 639
>gi|328769067|gb|EGF79112.1| hypothetical protein BATDEDRAFT_17244 [Batrachochytrium
dendrobatidis JAM81]
Length = 988
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 282/560 (50%), Gaps = 97/560 (17%)
Query: 114 EPLVLSKDGEYPIIQVPASINC-RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQT 172
EPL + + PA + ++ ++Q +G+ +L +Y+N GIL D+MGLGKT+Q+
Sbjct: 109 EPLTT-----FSFTESPAYVTGGKMRDYQIQGLNWLISIYENGINGILADEMGLGKTLQS 163
Query: 173 IAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG 231
I+FL + + +D KG L+I P S + NW EF RW + I+HG
Sbjct: 164 ISFLGYL-------------KHFLDNKGPHLVIVPKSTLHNWFSEFKRWVPSITAFIFHG 210
Query: 232 PNRD---MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
P + +I L + EV ITS++ + S S+V W+ +++DEAHR+KNE S L
Sbjct: 211 PKDERAGLISSSLHSGKFEVCITSYEMCLLEKSAFSKVAWQYIVIDEAHRIKNENSALSQ 270
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
+ RNR+ LTGT +QN + EL+ L +++ P + E F ++ + Q
Sbjct: 271 IVRLMNCRNRLLLTGTPLQNNLHELWALLNFLLPDVFSSAEDFDNWFSTDQEGDQ----- 325
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
D+ + L VLR +LLRR K + L+ K N ++ MS +Q+ Y+RLL+
Sbjct: 326 -------DKVVKQLHKVLRPFLLRRIKSDVEKSLLPKKRIN-LYVGMSTMQRMWYKRLLE 377
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
KD+ G+ + E RL N+ +++L++ NH L
Sbjct: 378 ---------KDIDAVNGAA-GRKESKTRLQNI--------------VMQLRKCCNHPYLF 413
Query: 469 ---KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
+P P D+ V + GKM L+KL+
Sbjct: 414 DGAEPGPPYTTDQHL-------------------------------VDNSGKMALLDKLL 442
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSK 584
++G ++LLFS R+LDILE + I K + + RLDG+T R + +D++N SK
Sbjct: 443 QHLKAQGSRVLLFSQMSRVLDILEDYCIWKEFDYCRLDGTTAHEDRINSIDEYNKPDSSK 502
Query: 585 QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+FL++TRAGGLG+NL +A+ V+++D +WNP + +DR+ R GQK+ V++FR ++ +
Sbjct: 503 FIFLLTTRAGGLGINLATADIVIMYDNDWNPQ--VVTEDRAHRIGQKKQVVIFRFITENA 560
Query: 645 LEELVYTRQVYKQQLSNIAV 664
+EE V R K +L + +
Sbjct: 561 IEEKVIDRATQKLRLDQLVI 580
>gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica]
Length = 996
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 289/578 (50%), Gaps = 99/578 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
++ ++Q G+ ++ LY+ GIL D+MGLGKT+QTI+ + + N
Sbjct: 121 KMRDYQIRGLNWMIGLYEKGVSGILADEMGLGKTLQTISMVGYL-------------KNY 167
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD---MILEKLEACGVEVLIT 251
G L+I P S IQNW EF RW + V + + + I + L +VL+T
Sbjct: 168 QKCNGPHLVIVPKSTIQNWMNEFDRWVPSLKVEMMNASKNERAIFIKDVLTQGDFDVLVT 227
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
+++ + S L ++NW I+DEAHR+KNEKSKL + E +T NR+ LTGT +QN +
Sbjct: 228 TYEQCMMEKSSLKKINWRYCIIDEAHRIKNEKSKLSLILREFRTTNRLLLTGTPLQNNLH 287
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLL 371
EL+ L +++ P ++F E++D+ K GQ L R L +L+ ++L
Sbjct: 288 ELWALLNFLLPDIFIDADNFDEYFDQK-KLGQELDLISR-----------LHMLLKPFML 335
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K + L+ K N ++ MS++QK Y+++L L +I L
Sbjct: 336 RRVKADVEKSLLPKKLVN-IYVPMSEMQKNWYKKIL-LKDIDIL---------------- 377
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQRKDAELASA 488
N G ++ L+ L++ +NH L +P P D+
Sbjct: 378 -------NTGGDKGGGKMRLMNILMHLRKCTNHPYLFDGAEPGPPYTTDQHI-------- 422
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
V +CGKM L+KL+ + GD++LLF+ MLDI
Sbjct: 423 -----------------------VDNCGKMVILDKLLKKCKANGDRVLLFTQFTSMLDIF 459
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
E + + + Y + RLDG T R +D +N+ S++ +F++ST+AGGLG+NL++AN V+
Sbjct: 460 EDYCLWRDYKYCRLDGGTDHADRTESIDAYNAPNSEKFLFMLSTKAGGLGINLMTANVVI 519
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SG 666
I+D +WNP DLQA DR+ R GQK+ V V+R+++ S++E + R K +L ++ + SG
Sbjct: 520 IYDSDWNPQNDLQAMDRAHRIGQKKQVYVYRMITDESVDERIIERSELKMRLDSVVIQSG 579
Query: 667 KLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE 704
+L Q+ K Q E+ N+ R + +F E
Sbjct: 580 RL------ADQNKKLNQKEML---NMIRHGASKIFAGE 608
>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
Length = 869
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 310/625 (49%), Gaps = 88/625 (14%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINC 135
DD KE E+ E+ + Q + D H E L + K +GE+P +VP I+
Sbjct: 217 TVDDRPKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDP 274
Query: 136 RLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 275 RLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEA 334
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL 241
I K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 335 GKPAIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 385
Query: 242 EACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 386 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 445
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R+ L+GT +QN + E ++L + P LGTR FR+ ++ P+ G+ A E+
Sbjct: 446 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 505
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
DE + L+A++ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ
Sbjct: 506 KGDECLKELLALVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITSPDIQ 564
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L L G S P L + L+++ NH +L+
Sbjct: 565 AL------------------------LRGKGSQP----LKAIGILKKLCNHPDLL----- 591
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-AS 530
L+ + G + ES ++K GKM+ L++++ A
Sbjct: 592 ----------NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVLDRMLARIRAD 641
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI+L S LD+ E+ +GY RLDG+ RQ LVD FN + VFL+
Sbjct: 642 TNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLL 701
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE +
Sbjct: 702 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKI 761
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYF 673
+ RQ +KQ LS+ V S + +R+F
Sbjct: 762 FQRQSHKQSLSSCVVDSAEDVERHF 786
>gi|403258156|ref|XP_003921642.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 1827
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
Length = 729
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 297/570 (52%), Gaps = 66/570 (11%)
Query: 122 GEYPI---IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTI 173
G+ P+ + V S++ L HQREGVKF+Y N G I+ D+MGLGKT+Q I
Sbjct: 98 GDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGKTLQCI 157
Query: 174 AFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY---H 230
L + + TI K +I+CPSS+++NW E +W +S
Sbjct: 158 TLLWTLVRQGPECKPTIDKG---------IIVCPSSLVRNWSNEIDKWLKGRLSCLIMDG 208
Query: 231 GPN-RDMILEKLEACG---VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
GP+ R + + ++ G + VLI S++++R+H IL + +V+ DE HRLKN +++
Sbjct: 209 GPDARKKLTQFMQGFGRTAIPVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQT 268
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
Y A + LK R R+ L+GT +QN ++E ++L +V G LG+ + F++ ++ P+ GQ T
Sbjct: 269 YKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDST 328
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + + A ER + L ++ + L+RRT +L + K + +V C ++ LQK+ Y
Sbjct: 329 ATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPV-KFEMIVICQLTPLQKQIYLNY 387
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ ++ L VE L L + L+++ NH +
Sbjct: 388 INSEGLR-----------KGVLNDVEVKASLS------------ALASITTLKKLCNHPD 424
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
LI DK + E F L+ N ++ + + GK+ L+ +
Sbjct: 425 LIM-------DKILEGGE----GFEKSRHLLPPNYNDKDVMP----QLSGKLMLLDCFLA 469
Query: 527 SWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+ + DK++L S + LD+ EK ++GY + RLDG+ R +V +FN S +
Sbjct: 470 NLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGE 529
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+F++S++AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQ++ ++R L+AG+
Sbjct: 530 FIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGT 589
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
+EE ++ RQ +K+ LS+ V E R+F
Sbjct: 590 IEEKIFQRQAHKKALSSTVVDNNEETARHF 619
>gi|73951131|ref|XP_536179.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Canis lupus familiaris]
Length = 1827
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N + LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|397491801|ref|XP_003816832.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Pan paniscus]
Length = 1829
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|410225782|gb|JAA10110.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410301988|gb|JAA29594.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410351375|gb|JAA42291.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
Length = 1828
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
Length = 700
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 288/548 (52%), Gaps = 67/548 (12%)
Query: 135 CRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
C L HQREGVKF++ + G I+ D+MGLGKT+Q I L + + + T
Sbjct: 104 CVLRPHQREGVKFMWDCVTGERIPGSQGCIMADEMGLGKTLQCITLLWTLLKQSPDAKPT 163
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA---- 243
I K +++ PSS+++NW E ++W + N ++D I L++
Sbjct: 164 IDK---------AIVVTPSSLVKNWYNEINKWLGTRVNALAIDSGSKDQIDRNLDSFMSQ 214
Query: 244 ----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+LI S++++R+H ++L +VI DE HRLKN ++ Y A LK R R+
Sbjct: 215 QGRRVSSPILIISYETFRLHAAVLHRGPIGLVICDEGHRLKNCENLTYQALSGLKCRRRV 274
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN ++E ++L +V G LGT + F++ ++ P+ G+ +A ++ + +E+
Sbjct: 275 LLSGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFETPILRGRDASASDKDQKRGEEKL 334
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
+ L+ ++ + ++RRT +L + K + VV C ++ LQ Y+ ++Q +Q ++K
Sbjct: 335 KELLDIVDRCIIRRTASILSKYLPV-KIEQVVCCRLTPLQTALYKHMVQSKLVQAQLDKS 393
Query: 420 LPCSC-GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
GS T + K+L N P + CL + + L+L P+K
Sbjct: 394 KSGKVTGSAFTAITQLKKLCNH------PSLIYEKCLEGDEGLDGALDLF-------PEK 440
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILL 537
+ P + Q E LS GKM L+ ++ SK DK++L
Sbjct: 441 -----------YSPK------HIQPE----LS-----GKMLVLDYILAMTKSKTSDKVVL 474
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK +GY + RLDGS R +V+ FN+ S + +F++S++AGG
Sbjct: 475 VSNYTQTLDLFEKLCRSRGYLYVRLDGSMTIKKRAKVVERFNNPSSPEFIFMLSSKAGGC 534
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLL+ G++EE ++ RQ +K
Sbjct: 535 GLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKQCYIYRLLATGTIEEKIFQRQAHK 594
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 595 KALSSCVV 602
>gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo
sapiens]
gi|119370320|sp|O14647.2|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2;
Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2
gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct]
Length = 1828
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
Length = 923
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 269/538 (50%), Gaps = 64/538 (11%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 253 LREHQREGVKFLYECVMGLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 307
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNR-DMILEKLEACGVEVL 249
V KK LI+CP ++I NW+ EF +W + + ++ + + I + V+
Sbjct: 308 GSQPVVKKA--LIVCPVTLINNWKKEFKKWLGSDRIGVFVADGKGNRISDFTMGRSYSVM 365
Query: 250 ITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R + + +IV+ DE HRLK ++K A L T RI L+GT +QN
Sbjct: 366 IIGYERLRSVQDQLTKGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQN 425
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
++ E + + D+V P LGT + F ++ P+ ++ AP++ I R + L +
Sbjct: 426 ELSEFFAMVDFVNPALLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSP 485
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + HL K + ++FC + Q+ Y +L P Q +
Sbjct: 486 FILRRTADILSKHL-PPKTEYILFCNPTSAQRSVYHHVLASPMFQSV------------- 531
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
L N + L + L+++ N L+KP D + +
Sbjct: 532 --------LRNSESA--------LQLITILKKVCNSPSLLKPKVEDNGKCEDTSMSALLS 575
Query: 489 VFGPDID--LVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSYSVRML 545
P I L G S GK+R L++L+Y+ SK +K++L S L
Sbjct: 576 SLPPSIHRCLAAG--------------SSGKIRVLDQLLYNLQSKTTEKVVLVSNYTSTL 621
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSA 603
++L L F RLDGSTP+ RQ+LV+DFN SPS FL+S +AGG GLNL+ A
Sbjct: 622 NLLANLLTSLDLPFLRLDGSTPATRRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNLIGA 681
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+R+V+FD +WNPA D+QA R R GQKRH ++RLL G +EE ++ RQV K L++
Sbjct: 682 SRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLAD 739
>gi|355693011|gb|EHH27614.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca mulatta]
gi|355778318|gb|EHH63354.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca fascicularis]
gi|380809122|gb|AFE76436.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
gi|383415421|gb|AFH30924.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
Length = 1828
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae
P131]
Length = 843
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 310/625 (49%), Gaps = 88/625 (14%)
Query: 82 VFDDEEKEKEQEQEKFGRHQLGQFQFD----HTGPFEPLVLSK--DGEYPIIQVPASINC 135
DD KE E+ E+ + Q + D H E L + K +GE+P +VP I+
Sbjct: 191 TVDDRPKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDP 248
Query: 136 RLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ES 185
RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + + E+
Sbjct: 249 RLAKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEA 308
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL 241
I K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 309 GKPAIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQL 359
Query: 242 EACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL 293
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 360 RQWAISSGRAVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNL 419
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
R+ L+GT +QN + E ++L + P LGTR FR+ ++ P+ G+ A E+
Sbjct: 420 NVSRRVILSGTPIQNDLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERV 479
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
DE + L+A++ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ
Sbjct: 480 KGDECLKELLALVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITSPDIQ 538
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L L G S P L + L+++ NH +L+
Sbjct: 539 AL------------------------LRGKGSQP----LKAIGILKKLCNHPDLL----- 565
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-AS 530
L+ + G + ES ++K GKM+ L++++ A
Sbjct: 566 ----------NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVLDRMLARIRAD 615
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI+L S LD+ E+ +GY RLDG+ RQ LVD FN + VFL+
Sbjct: 616 TNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEGSEFVFLL 675
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE +
Sbjct: 676 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKI 735
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYF 673
+ RQ +KQ LS+ V S + +R+F
Sbjct: 736 FQRQSHKQSLSSCVVDSAEDVERHF 760
>gi|390603601|gb|EIN12993.1| SNF2 family DNA-dependent ATPase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1021
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 331/664 (49%), Gaps = 107/664 (16%)
Query: 64 PQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGE 123
PQQ R K EK+ EKE+++E K G + G +P V
Sbjct: 72 PQQKKRGR--KKADEKNARRRKSEKEEDEEMLKDGERAVD-------GDDQPFVFE---- 118
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
+ P+ I+ + +Q +G+ ++ L+ N GIL D+MGLGKT+QTI+FL
Sbjct: 119 ----ESPSFIHGTMRPYQLQGLNWMISLHHNGLNGILADEMGLGKTLQTISFL------- 167
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILE 239
+ LK N + G +++ P S +QNW EF +W+ FN+ + G ++I
Sbjct: 168 -----SYLKHN-LGSNGPHIVVVPKSTLQNWAREFEKWTPDFNIVVLAGSKDERAEIIAN 221
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ E+ IT+++ I S L ++++E +++DEAHR+KN S L +R R+
Sbjct: 222 RILPQNFEICITTYELCLIEKSALKKLSFEYIVIDEAHRIKNVDSILAQIVRSFSSRGRL 281
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD-EPLKHGQRLTAPERFIRIADER 358
+TGT +QN + EL+ L +++ P E F ++ D E H TA DE
Sbjct: 282 LITGTPLQNNLKELFALLNFICP------EIFSDYADLESFLHKDDETAE------GDED 329
Query: 359 K-----QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
K + L +LR +LLRR K + +L+ KE N+ + ++D+Q++ YR +L+
Sbjct: 330 KSKKVVEALHKILRPFLLRRVKADVEKNLLPKKEINI-YVGLTDMQRKWYRSVLE----- 383
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
KD+ + S + E RL N+ +++L++++ H L
Sbjct: 384 ----KDID-AVNSLTGKKEGKTRLMNM--------------VMQLRKVTCHPYLF----- 419
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
D + D L+ ++CGKM L+KL+ S KG
Sbjct: 420 --------DGAEPGPPYTTDEHLI---------------ENCGKMVILDKLLKSMKEKGS 456
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTR 592
++L+FS RMLDILE + + + Y + R+DGST R + +D++N S K +FL++TR
Sbjct: 457 RVLIFSQMSRMLDILEDYCLFRQYKYCRIDGSTAHEDRITSIDEYNKPGSDKFIFLLTTR 516
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGGLG+NLV+A+ VV++D +WNP DLQA DR+ R GQ + V VFR ++ S+EE + R
Sbjct: 517 AGGLGINLVTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEESVEERMLER 576
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQ 712
K +L + + +++ + + + G + + +DNL ++ IE+ ++
Sbjct: 577 AAQKLRLDQLVIQQGRQQQANKAASKEELLEMITHGAEKIV-NSNDNLMVNDDIETIIQR 635
Query: 713 GQQQ 716
G+Q+
Sbjct: 636 GEQR 639
>gi|449498933|ref|XP_002192409.2| PREDICTED: probable global transcription activator SNF2L1-like
[Taeniopygia guttata]
Length = 1185
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 289/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 310 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 356
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 357 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 416
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 417 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 476
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + + F ++D G Q+L + L AVL+ +LL
Sbjct: 477 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 523
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y R+L
Sbjct: 524 RRIKGEVEKSLPPKKEVKI-YLGLSKMQREWYTRIL------------------------ 558
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 559 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 603
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D L+ + GKM L+KL+ +G ++LLFS R+LDILE +
Sbjct: 604 TDTHLI---------------TNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDY 648
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 649 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYD 708
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 709 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 768
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 769 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTDEDITTILERGEKK 814
>gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
Length = 922
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 273/550 (49%), Gaps = 64/550 (11%)
Query: 137 LLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L EHQREGVKFLY+ + N G IL D+MGLGKT+QTIA + + ++ I
Sbjct: 252 LREHQREGVKFLYECVMGLRHFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IY 306
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-GVEVL 249
V KK LI CP ++I NW+ EF +W + + ++ + +L V+
Sbjct: 307 GSQPVIKKA--LIACPVTLINNWKKEFKKWLGSDRIGVFVADGKGNLLSDFTMGRSYSVM 364
Query: 250 ITSFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ R + + ++V+ DE HRLK ++K A L T RI L+GT +QN
Sbjct: 365 IIGYERLRSVQDQLTKGPGIDLVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQN 424
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
++ E + + D+V P LGT + F ++ P+ ++ AP++ I R + L +
Sbjct: 425 ELSEFFAMVDFVNPALLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKARSEELAELTSP 484
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT + HL K + ++FC + Q+ Y +L P Q +
Sbjct: 485 FILRRTADILSKHL-PPKTEYILFCNPTSAQRSVYHHVLASPMFQSV------------- 530
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
L +S L + L+++ N L+KP D + +
Sbjct: 531 -----------LRNSESA-----LQLITILKKVCNSPSLLKPKVEDNGKGEDTSMSALLS 574
Query: 489 VFGPDI--DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRML 545
P+I L G S GK+R L++L+Y+ SK +K++L S L
Sbjct: 575 SLPPNIHRSLAAG--------------SSGKIRVLDQLLYNLQSKTKEKVVLVSNYTSTL 620
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSA 603
++L L F RLDGSTP+ RQ+LV+DFN SPS FL+S +AGG GLNL+ A
Sbjct: 621 NLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSAKAGGTGLNLIGA 680
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+R+V+FD +WNPA D+QA R R GQKRH ++RLL G +EE ++ RQV K L++
Sbjct: 681 SRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSV 740
Query: 664 VSGKLEKRYF 673
+ K +F
Sbjct: 741 MGQKGGIAHF 750
>gi|355678659|gb|AER96176.1| chromodomain helicase DNA binding protein 2 [Mustela putorius furo]
Length = 1027
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 291/585 (49%), Gaps = 102/585 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 470 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 522
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 523 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 576
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 577 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT 636
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLV 363
+QN + EL++L ++ P E F E + + ++G Q L H+
Sbjct: 637 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSL---------------HIH 681
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 682 KVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWIL-TRNYKALAKGTRGST 739
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G L +++L++ NH LIKP +E
Sbjct: 740 SG-------------------------FLNIVMELKKCCNHCYLIKPPEENE-------- 766
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+N + LS ++S GK+ L+KL+ +G+++L+FS VR
Sbjct: 767 -----------------RENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVR 809
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
MLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL S
Sbjct: 810 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLAS 869
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 870 ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHL 929
Query: 663 AV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 930 VIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 974
>gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens]
Length = 1049
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 1857
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 445 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 497
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 498 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 551
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 552 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 611
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 612 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 655
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 656 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 713
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 714 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 739
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 740 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 783
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 784 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 843
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 844 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 903
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 904 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 947
>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
protein [Tribolium castaneum]
Length = 713
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 297/570 (52%), Gaps = 66/570 (11%)
Query: 122 GEYPI---IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTI 173
G+ P+ + V S++ L HQREGVKF+Y N G I+ D+MGLGKT+Q I
Sbjct: 82 GDGPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGKTLQCI 141
Query: 174 AFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIY---H 230
L + + TI K +I+CPSS+++NW E +W +S
Sbjct: 142 TLLWTLVRQGPECKPTIDKG---------IIVCPSSLVRNWSNEIDKWLKGRLSCLIMDG 192
Query: 231 GPN-RDMILEKLEACG---VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
GP+ R + + ++ G + VLI S++++R+H IL + +V+ DE HRLKN +++
Sbjct: 193 GPDARKKLTQFMQGFGRTAIPVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQT 252
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
Y A + LK R R+ L+GT +QN ++E ++L +V G LG+ + F++ ++ P+ GQ T
Sbjct: 253 YKALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDST 312
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + + A ER + L ++ + L+RRT +L + K + +V C ++ LQK+ Y
Sbjct: 313 ATDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPV-KFEMIVICQLTPLQKQIYLNY 371
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ ++ L VE L L + L+++ NH +
Sbjct: 372 INSEGLR-----------KGVLNDVEVKASLS------------ALASITTLKKLCNHPD 408
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
LI DK + E F L+ N ++ + + GK+ L+ +
Sbjct: 409 LIM-------DKILEGGE----GFEKSRHLLPPNYNDKDVMP----QLSGKLMLLDCFLA 453
Query: 527 SWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+ + DK++L S + LD+ EK ++GY + RLDG+ R +V +FN S +
Sbjct: 454 NLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAKVVANFNDPESGE 513
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+F++S++AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQ++ ++R L+AG+
Sbjct: 514 FIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQQKPCYIYRFLAAGT 573
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
+EE ++ RQ +K+ LS+ V E R+F
Sbjct: 574 IEEKIFQRQAHKKALSSTVVDNNEETARHF 603
>gi|425768760|gb|EKV07276.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
gi|425776120|gb|EKV14354.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
Length = 1096
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 278/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I+ L ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 177 PAFIHGELRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------R 227
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
++D G L++ P S + NW+ EF++W+ +V + G + +I E+L
Sbjct: 228 YIRD----INGPHLVVVPKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQLINERLVEEE 283
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +++DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 284 FDVCITSYEMILREKSHLKKFAWEYIVIDEAHRIKNEESSLSQIIRLFNSRNRLLITGTP 343
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ + + Q L V
Sbjct: 344 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQDSDQETVV-------------QQLHRV 390
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MS++Q+R Y+++L+ KD+ G
Sbjct: 391 LRPFLLRRVKSDVEKSLLPKKELN-LYVPMSEMQRRWYQKILE---------KDIDAVNG 440
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 441 AA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 482
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF + GKM L+KL+ + G ++L+FS
Sbjct: 483 -----LVF-----------------------NSGKMVILDKLLKRMQADGSRVLIFSQMS 514
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + Y++ R+DG+T R + +DD+N S K VFL++TRAGGLG+NL
Sbjct: 515 RVLDILEDYCCFRDYNYCRIDGTTAHEDRIAAIDDYNKPGSDKFVFLLTTRAGGLGINLT 574
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ VV+FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R K +L
Sbjct: 575 SADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQ 634
Query: 662 IAV 664
+ +
Sbjct: 635 LVI 637
>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
fuckeliana]
Length = 862
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 293/577 (50%), Gaps = 76/577 (13%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQ 171
+GE P +VP I+ RL + HQ EGVKF+Y+ +G I+ D+MGLGKT+Q
Sbjct: 255 EGERP--KVPVVIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQ 312
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVS 227
I + + +S+D+ NK +I CPSS+++NW E +W + +
Sbjct: 313 CITLMWTML--KQSTDAGKPTINKA------IIACPSSLVKNWANELVKWLGPDAIQPFA 364
Query: 228 IYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRL 279
I +++ ++++L + V+I S+++ R++ L +++ DE HRL
Sbjct: 365 IDGKASKEELIQQLRQWAIASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRL 424
Query: 280 KNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPL 339
KN S+ ++A L R+ L+GT +QN + E ++L + PG LGTR FR+ Y+ P+
Sbjct: 425 KNGDSQTFVALNSLNVTRRVILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPI 484
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQ 399
+ G+ ++ + DE + L+ V+ K+++RRT + +L + K ++VVFC ++ Q
Sbjct: 485 QRGRDAAGSDKDRQKGDECIKELLNVVNKFIIRRTNDILSKYLPV-KYEHVVFCGLAPFQ 543
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
Y + P+I+ L+ PL + K+L N P L+ L
Sbjct: 544 LDLYNHFITSPDIKALLRG----KGSQPLKAIGMLKKLCN------------HPDLLNLS 587
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
+ E P D + +D ++ GKM+
Sbjct: 588 EDLPGCEQYWPEDYVPKDGRGRDRDIKPWY-------------------------SGKMQ 622
Query: 520 ALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
L++++ DKI+L S + LD+ +K +GY RLDG+ RQ LVD F
Sbjct: 623 VLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRSRGYGSLRLDGTMNVTKRQKLVDKF 682
Query: 579 NSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVF 637
N ++ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+
Sbjct: 683 NDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVY 742
Query: 638 RLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 743 RFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 779
>gi|312374256|gb|EFR21846.1| hypothetical protein AND_16272 [Anopheles darlingi]
Length = 1024
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 215/732 (29%), Positives = 343/732 (46%), Gaps = 134/732 (18%)
Query: 19 PSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSL--------------- 63
P ++ S ES++DT + P + R G+ ++F L
Sbjct: 8 PVETGDTNDNSNESNSDTTSSNTKEPDYDATLETDR-GKRFDFLLKQTEIFAHFMNTAPS 66
Query: 64 --PQQNPETRREKAPVEKSNV--FDDEEKEKEQEQEKFGRHQLGQ-----FQFDHTGPFE 114
P + P R+ KA + D ++ EQE+++ + Q F+F+ + P+
Sbjct: 67 KSPPKAPRGRKPKADKADKIIDPLDHRHRKTEQEEDEELLAETNQKAKTVFRFESSPPY- 125
Query: 115 PLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIA 174
K GE + ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+
Sbjct: 126 ----IKAGE-------------MRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIS 168
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVS-IYHG 231
L + N + G ++I P S +QNW EF RW S V I
Sbjct: 169 LLGYL-------------KNVRNNHGPHIVIVPKSTLQNWVNEFGRWCPSLRPVCLIGDQ 215
Query: 232 PNRDMILEKLEACG-VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
R+ + + G +V ITS++ ++ + NW +++DEAHR+KNEKSKL
Sbjct: 216 ETRNAFIRDVLMPGEWDVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEIL 275
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
E KT NR+ LTGT +QN + EL+ L +++ P + E F ++D +
Sbjct: 276 REFKTANRLLLTGTPLQNNLHELWALLNFLLPDIFNSAEDFDSWFD-----ANQCMGDNS 330
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
I + L AVL+ +LLRR K E L+ KE + F +S +Q+ Y ++L
Sbjct: 331 LI-------ERLHAVLKPFLLRRLKSEVEKRLLPKKEVKI-FVGLSKMQREWYTKILM-- 380
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
KD+ G+ +VE RL N+ L++L++ +NH L
Sbjct: 381 -------KDIDVVNGA--GKVEKM-RLQNI--------------LMQLRKCTNHPYLF-- 414
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
D + D L+ ++ GKM L+KL+
Sbjct: 415 -----------DGAEPGPPYTTDYHLL---------------ENSGKMVVLDKLLRKLQE 448
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
+ ++L+FS RMLDILE F +GY + RLDG TP R +++ D+N+ SK+ +F++
Sbjct: 449 QESRVLIFSQMTRMLDILEDFCHWRGYHYCRLDGQTPHEDRSNMIADYNAPDSKKFIFML 508
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
STRAGGLG+NL +A+ V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE +
Sbjct: 509 STRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKI 568
Query: 650 YTRQVYKQQLSNIAV-SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE---- 704
R K +L + + G+L + + FG ++F+ D+ T E
Sbjct: 569 VERAEVKLKLDKLVIQQGRLVDNKTNQLNKDEMLNIIRFGANHVFQS-RDSEITDEDIDA 627
Query: 705 IIESHEEQGQQQ 716
I++ EE+ Q+Q
Sbjct: 628 ILQKGEEKTQEQ 639
>gi|157103787|ref|XP_001648130.1| helicase [Aedes aegypti]
gi|108880485|gb|EAT44710.1| AAEL003968-PA [Aedes aegypti]
Length = 1027
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 269/538 (50%), Gaps = 86/538 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
+ ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L + N
Sbjct: 141 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYL-------------KNFR 187
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW--STFNVS-IYHGPNRDMILEKLEACG-VEVLITS 252
+ G ++I P S +QNW EF RW S V I R+ + + G +V ITS
Sbjct: 188 NNPGPHIVIVPKSTLQNWVNEFGRWCPSLRAVCLIGDQETRNAFIRDVLMPGEWDVCITS 247
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ ++ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 248 YEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHE 307
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L+ L +++ P + + F ++D + I + L AVL+ +LLR
Sbjct: 308 LWALLNFLLPDIFNSADDFDSWFD-----ANECIGDNKLI-------ERLHAVLKPFLLR 355
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K E L+ KE + F +S +Q+ Y ++L
Sbjct: 356 RLKSEVEKRLLPKKEVKI-FVGLSKMQREWYTKIL------------------------- 389
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGP 492
K +D ++G + L++L++ +NH L D +
Sbjct: 390 -MKDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLF-------------DGAEPGPPYTT 435
Query: 493 DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL 552
D L+ ++ GKM L+KL+ +G ++L+FS RMLDILE +
Sbjct: 436 DYHLL---------------ENSGKMVVLDKLLTKLQEQGSRVLVFSQMTRMLDILEDYC 480
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDP 611
+GY + RLDG TP R ++D++N+ + SK +F++STRAGGLG+NL +A+ V+I+D
Sbjct: 481 YWRGYQYCRLDGQTPHEDRTKMIDEYNAENSSKFIFMLSTRAGGLGINLATADVVIIYDS 540
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L + + G+L
Sbjct: 541 DWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEIKLKLDKLVIQQGRL 598
>gi|171677949|ref|XP_001903925.1| hypothetical protein [Podospora anserina S mat+]
gi|170937043|emb|CAP61702.1| unnamed protein product [Podospora anserina S mat+]
Length = 1057
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 279/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA IN + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 147 PAFINGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 196
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G LI P S + NW+ EF++W+ NV I G + +I ++L
Sbjct: 197 ---RHIMGITGPHLITVPKSTLDNWKREFAKWTPEVNVLILQGAKEERHQLINDRLVDED 253
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 254 FDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTP 313
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 314 LQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----GQD--------RDQDTVVQQLHKV 360
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+R+L+ KD+ G
Sbjct: 361 LRPFLLRRVKSDVEKSLLPKKEVN-VYIGMSEMQVKWYKRILE---------KDIDAVNG 410
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 411 AG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH--- 452
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF + GKM L+KL+ ++ ++L+FS
Sbjct: 453 -----LVF-----------------------NSGKMIILDKLLKRMQAQDSRVLIFSQMS 484
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + +GY + R+DG T R + +D++N S++ +FL++TRAGGLG+NL
Sbjct: 485 RLLDILEDYCVFRGYKYCRIDGGTAHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLT 544
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V+++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 545 TADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 604
Query: 662 IAV 664
+ +
Sbjct: 605 LVI 607
>gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi]
gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi]
Length = 865
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 281/555 (50%), Gaps = 66/555 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V +++ L HQREGVKF+Y + HG I+ D+MGLGKT+Q I + +
Sbjct: 242 VVVDPTLSAVLRPHQREGVKFMYDCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTLLR 301
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILE 239
+ + T+ K +I+CPSS+++NW+ E +W N +D I
Sbjct: 302 QGPDAKPTLNK---------TVIVCPSSLVKNWDKEIRKWLGGRVNALPVDSGGKDEIDR 352
Query: 240 KLEA--------CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
LE C VLI S++++R+H SIL + ++I DE HRLKN ++ Y A
Sbjct: 353 NLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHRLKNSDNQTYQALF 412
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
LK R+ ++GT +QN ++E Y+L ++V PG LGT F+ ++ + G+ A +
Sbjct: 413 GLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENIILRGRDADATDAQ 472
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
D + +++ K ++RRT +L + K + ++ C +++LQ++ YR+L+
Sbjct: 473 REKGDTALTEMSSIVSKCIIRRTSALLTKYLPV-KYELIICCKLTELQEKLYRQLIS--- 528
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
S G E D + G L + L+++ NH +LI
Sbjct: 529 ---------AFSKGGKQKVTEG----DKITG-------TALSFITNLKKLCNHPQLILNK 568
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-AS 530
+ + + +L FG + +F GKM+ L+ L+ + A+
Sbjct: 569 CQKKEEGFEDCLKLFPGEFGKKFE--------PAF--------SGKMKVLDYLLAATRAT 612
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DK +L S + +D + + Y + RLDG+ R LV+ FN S + VFL+
Sbjct: 613 TNDKFVLVSNYTQTIDAFVELCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPESVEYVFLL 672
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQK++ ++RLLS GS+EE +
Sbjct: 673 SSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKNCFIYRLLSTGSIEEKM 732
Query: 650 YTRQVYKQQLSNIAV 664
+ RQ +K+ LS+ V
Sbjct: 733 FQRQAHKKALSSCVV 747
>gi|443894835|dbj|GAC72182.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 865
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/559 (31%), Positives = 293/559 (52%), Gaps = 74/559 (13%)
Query: 137 LLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY+ + +N +G I+ D+MGLGKT+Q IA + + + S I
Sbjct: 281 LRPHQVEGVKFLYRCTTGLVVENAYGCIMADEMGLGKTLQCIALMWTLLKQ-----SPIA 335
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE----- 242
K + +DK +I+CPSS+++NW E ++W + +++ ++D ++E
Sbjct: 336 KKSTIDK---CIIVCPSSLVRNWANELTKWLGAKAPGTLALDGKLSKDEMIEATRRWCNA 392
Query: 243 ---ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
A V+I S+++ R L +++ DE HRLKN S + A ++K R R+
Sbjct: 393 SGRAITQPVMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRV 452
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN + E + L ++ P LG+R FR+ ++ + G+ A E+ + A+E+
Sbjct: 453 ILSGTPIQNDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATEKQQQEANEKL 512
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L A++ ++++RRT + +L + K ++VVFC M+ Q YR ++ PEI+ L
Sbjct: 513 SQLSALVSRFIIRRTNDLLSKYLPV-KYEHVVFCKMAPFQLDLYRLFIRSPEIKKL---- 567
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
L G S P L + L+++ NH +L+ + +Q
Sbjct: 568 --------------------LRGTGSQP----LKAIGILKKLCNHPDLLDLPNDLDGSEQ 603
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLF 538
+ P+ G ++ ++ + + GKM L++ + + A+ DKI+L
Sbjct: 604 ----------YFPE----GYTPRDRRYV---NPELSGKMMVLQRFLETIRATTNDKIVLI 646
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S + LD+ E+ + RLDG+ N RQ LVD FN K+ +FL+S++AGG G
Sbjct: 647 SNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCG 706
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS+EE + RQ +KQ
Sbjct: 707 LNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQ 766
Query: 658 QLSNIAVS-GKLEKRYFEG 675
LS+ V + R+F G
Sbjct: 767 SLSSCVVDEAQDAARHFSG 785
>gi|429860886|gb|ELA35603.1| chromatin remodelling complex atpase chain isw1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1121
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 278/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 176 PAFIQGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 225
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACG 245
+ +D G ++I P S + NW+ EF +W+ NV + G ++I ++L +
Sbjct: 226 ---RHIMDITGPHIVIVPKSTLDNWKREFEKWTPEVNVLVLQGAKEERHNLINDRLVSED 282
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 283 FDVCITSYEMVLREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 342
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ GQ R D Q L V
Sbjct: 343 LQNNLHELWALLNFLLPDVFGDSEAFDQWF-----SGQD--------RDQDTVVQQLHRV 389
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N V+ MS++Q + Y+++L+ KD+ G
Sbjct: 390 LRPFLLRRVKSDVEKSLLPKKEVN-VYLGMSEMQIKWYQKILE---------KDIDAVNG 439
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 440 AN-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 482
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 483 -----------------------------VYNAGKMVVLDKLLNRMQKQGSRVLIFSQMS 513
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R + +D++N S++ +FL++TRAGGLG+NL
Sbjct: 514 RLLDILEDYCVFRQYKYCRIDGGTAHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLT 573
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 574 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 633
Query: 662 IAV 664
+ +
Sbjct: 634 LVI 636
>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 294/580 (50%), Gaps = 76/580 (13%)
Query: 113 FEPLVL--SKDGEYPIIQVPASINC-----RLLE-HQREGVKFLYKLYKNKHGG------ 158
+PLVL +D E + + ASI R L HQREGV+F+++ H G
Sbjct: 150 IDPLVLWQPEDSELNVTNL-ASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGC 208
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
IL DDMGLGKT+Q+I+ L + + + K +I+ P+S++ NWE E
Sbjct: 209 ILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKK---------AIIVTPTSLVSNWEAEI 259
Query: 219 SRWSTFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEI 270
+W V + +R+ ++ +++ ++VLI S++++R+H S S+ + ++
Sbjct: 260 KKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDL 319
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
+I DEAHRLKN+++ A L R R+ L+GT MQN + E + + ++ PG LG H
Sbjct: 320 LICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSH 379
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
FR +Y+ P+ G+ A E ++ +R L + +++LRRT HL K V
Sbjct: 380 FRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHL-PPKIVEV 438
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
+ C +S LQ Y +Q ++ I ++ L Q +
Sbjct: 439 ICCKLSPLQADLYNHFVQSKNVKRAITEE--------LKQAK------------------ 472
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI------DLVGGNAQNE 504
+L + L+++ NH +LI + E F P++ GG+
Sbjct: 473 ILAYITALKKLCNHPKLIYDTIKSG-SPGTSGLESCIRFFPPEMFSGRSGAWTGGDG--- 528
Query: 505 SFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLD 563
+++ LS GKM L +L+ + D+I+L S + LD+ + + Y + RLD
Sbjct: 529 AWVELS-----GKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD 583
Query: 564 GSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQ 622
G+T + RQ LV+ FN S + VFL+S++AGG GLNL+ NR+V+FDP+WNPA D QA
Sbjct: 584 GTTSISKRQKLVNRFNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 643
Query: 623 DRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
R +R GQK+ V ++R LS G++EE VY RQ+ K+ L +
Sbjct: 644 ARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKV 683
>gi|345793211|ref|XP_850491.2| PREDICTED: DNA repair and recombination protein RAD54B isoform 8
[Canis lupus familiaris]
Length = 744
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 284/552 (51%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 114 FPVVDVVIDPHLVYHLRPHQKEGIMFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLI 173
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 174 WTLQCQGPYGGKPVVKKT--------LIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 225
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E + VLI S++ + V + ++I DE HRLKN K A + L
Sbjct: 226 KVEEFTRSPFYSVLIISYEMLLRSLDQIKNVKFGLLICDEGHRLKNSAIKTTAALISLSC 285
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
R+ LTGT +QN + E + L D+V PG LG+ +R+ Y+EP+ ++ +A E ++
Sbjct: 286 EKRVILTGTPVQNDLQEFFALIDFVNPGILGSLSFYRKVYEEPIIISRQPSASEEEKKLG 345
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
++R L + ++LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 346 EKRAVELTCLTGLFILRRT-QEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFC 404
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L SP L C+ L+++ NH L+ + +++
Sbjct: 405 LQGLLG---NSPH-----------------------LICIGALKKLCNHPCLLFNSIKEK 438
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D + +++ +D+ + F S+ +S GK++ L KL+ +
Sbjct: 439 ECSSTWDGKEEKSLYEALLDVFPADYNPLMF---SEEES-GKLQVLLKLLAVIHELRPTE 494
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + LDIL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 495 KVVLVSNYTQTLDILQEVCKRHGYTYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSK 554
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 555 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKNPVHIYRLLTTGTIEEKIYQR 614
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 615 QISKQDLSGAVV 626
>gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
Length = 851
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/571 (30%), Positives = 281/571 (49%), Gaps = 58/571 (10%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQTIAF 175
DG + I +V + L EHQR GVKF+++ HG IL DDMGLGKT+Q+I
Sbjct: 120 DGTHKI-EVDNILTKWLREHQRSGVKFMFECLMGLRAFEGHGCILADDMGLGKTLQSITI 178
Query: 176 LAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPN 233
L + + + K +++CP+S+++NW E +W + +
Sbjct: 179 LWTLLNQGFDGKPAVRK---------AVVVCPASLVKNWAYEIEKWLLGKCPCTAVAEKD 229
Query: 234 RDMILEKLEACGVE----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
R+ ++ + VLI S++++R+H S L V +++I DEAHRLKN+K+K +A
Sbjct: 230 REKVISMFAGFKYDRVSRVLIASYETFRMHASNLDGVPIDLIICDEAHRLKNDKTKTSIA 289
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
L + R+ L+GT +QN ++E Y+L P +LG FR+ Y P+ G+ A E
Sbjct: 290 INNLPAKKRLLLSGTPIQNDLIEFYSLVSLANPQALGDVSTFRKIYANPILEGREPDATE 349
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+A +R Q L + ++LRR + ++ K +FC ++ Q Y++ L+
Sbjct: 350 YQQDLAAQRLQELSNITNLFILRRAN-TLLAKVLPPKIILNIFCRLTPFQSYLYKKFLRS 408
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
+ +++ + C P+ L G VL + L ++ NH LIK
Sbjct: 409 AACRKMLDTETSCGNSRPI----------GLTG-------QVLSSIQSLMKLCNHPSLIK 451
Query: 470 PNPRDEPDK----------QRKDAELASAVFGPDI---DLVGGNAQNESFIGLSDVKSCG 516
P + Q + S FG + VG N ++ D+ G
Sbjct: 452 PKSSGSYGRGFEGCEKYLEQAQSKSYTSGGFGSGVLSRRKVGNN--RSAYESRPDIS--G 507
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
K+ L +L++ S D+++L S + LD+ E+ RLDGST R S+V
Sbjct: 508 KLYLLSRLLFQIRRSTDDRVVLVSNYTQTLDVFERLCRDLQVPCVRLDGSTSITKRHSMV 567
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
FN S FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK++
Sbjct: 568 KIFNDPNSNSFAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNC 627
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
++R S G++EE +Y RQ+ K LS + V+
Sbjct: 628 YIYRFFSTGTIEEKIYQRQLCKDGLSAMLVT 658
>gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens]
Length = 1739
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|157870081|ref|XP_001683591.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
Length = 1127
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 283/546 (51%), Gaps = 55/546 (10%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQ GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 431 IGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQ 490
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
T K L++ PSS+++NW EF +W F +S P D I+ +
Sbjct: 491 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVRHFAIS-ESTPKGDRIISRF 540
Query: 242 EACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G +VL+ S+D R + LS + + E+V+ DE HRLKN + K A L TRNRI
Sbjct: 541 DGDG-DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRII 599
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + E + + ++V PG LG R+ F ++EP+ G+ P+ + +R +
Sbjct: 600 LSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRAR 659
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQCLINKD 419
+L + ++++LRRT+ +L K D VF + + Q+ AY++L + E +C
Sbjct: 660 YLSVLTQRFILRRTQSINESYLPP-KVDVTVFVRLGEKQELAYQKLADVVESAEC----- 713
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL-QQISNHLELIKPNPRDEPDK 478
+PL + ++L C + V L QI N + +
Sbjct: 714 ------TPLVLISALRKL--------CNHMDLFHDAVHLSHQIGNSAGASAQQQQQAGRR 759
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG-KMRALEKLMYSWASKG--DKI 535
+ + + + P L G GLS CG KM + ++ G DK+
Sbjct: 760 RGRSSAAGESQGIPLSVLPKGFRPG----GLS--MDCGSKMHFVSLVLDELKGNGEHDKL 813
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
++ S + LDI+ K ++ +LDGSTP RQ LVD FN S++ VFL+S++AG
Sbjct: 814 VIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGSQEIVFLLSSKAG 873
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE +Y RQV
Sbjct: 874 GVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKCVFIYRLLSTGTIEEKIYQRQV 933
Query: 655 YKQQLS 660
KQ LS
Sbjct: 934 SKQGLS 939
>gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens]
Length = 1739
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 1131
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 291/583 (49%), Gaps = 67/583 (11%)
Query: 114 EPLVLSKDGE----YPIIQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDM 164
EPLVL +D + PI+ V + L HQREGVKF+++ + G IL DDM
Sbjct: 151 EPLVLWEDADGGTNRPIV-VDNMLVKWLRPHQREGVKFMFECVMGLRDFDGRGCILADDM 209
Query: 165 GLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTF 224
GLGKT+Q I L + + + + K LI+CP+S++ NW+ E ++W
Sbjct: 210 GLGKTLQGITLLWTMLCQGVVTGTPTAK--------RALIVCPTSLVSNWDDECNKWLKG 261
Query: 225 NVS---IYHGPNRDMILEKLEACG----VEVLITSFDSYRIHGSIL-SEVNWEIVIVDEA 276
V I D+I +V+I S++++RIH +E + ++V+ DEA
Sbjct: 262 RVKTLPICESSRADVISSVNRFLSPRNTAQVMIVSYETFRIHAERFGAEDSVQLVMCDEA 321
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKN + A + R R+ L+GT MQN + E Y++ ++ PG LGT F + Y+
Sbjct: 322 HRLKNGDTLTNKALQSVPCRRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTTAEFHKHYE 381
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
+P+ G+ A E+ + +A ER L ++ K++LRRT HL K VV C +S
Sbjct: 382 KPILDGREPDATEKQLALAQERNAELSELVNKFVLRRTNTILSKHLPP-KVVEVVCCKLS 440
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
LQ++ Y+ L + + +VL +
Sbjct: 441 PLQQQLYQHFLDSKAAKAALTGK----------------------------STMVLAAIT 472
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDA--ELASAVFGPDI-DLVGGNAQNESFIGLSDVK 513
L+++ NH +LI E + A E A F P + D+ G + + +S G+ D
Sbjct: 473 ALKKLCNHPKLIYDMINAEKNTGSAAAGFESCGAYFQPGMYDVRGPHGRGKS--GMCDGW 530
Query: 514 S--CGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
GK L +L+ A D+I++ S + LD+++ + Y RLDG T
Sbjct: 531 EFHSGKFAVLARLLAILRAETKDRIVIISNYTQTLDLVQFLCKQNNYPHCRLDGGTSITK 590
Query: 571 RQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
RQ LV FN P++ VFL+S++AGG G+NL+ NR+V+FDP+WNPA D QA R +R
Sbjct: 591 RQKLVRQFN-DPTENCFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWRD 649
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS-GKLEK 670
GQK+ ++RL + GS+EE V+ RQ+ K+ L N+ G LE+
Sbjct: 650 GQKKKCYLYRLFATGSIEEKVFQRQLSKESLQNVVNGEGTLEQ 692
>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
Length = 856
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 295/580 (50%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
D E+P +VP I+ RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q
Sbjct: 249 DDEHP--RVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQ 306
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV---- 226
I+ + + + ++ STI K +++CP+S+++NW E ++W N
Sbjct: 307 CISLMWTLLKQSPDAGKSTIQK---------AIVVCPASLVKNWANELTKWLGANAINPF 357
Query: 227 SIYHGPNRDMILEKL----EACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L A G V +I S+++ R++ L ++ DE HR
Sbjct: 358 AIDGKASKEELTRQLRQWANATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHR 417
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S + A L R+ LTGT +QN + E ++L + P LGTR FR+ Y+ P
Sbjct: 418 LKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIP 477
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L+ V+ K+L+RRT + +L + K ++VVFC ++
Sbjct: 478 ILRGRDADASEADRKKGDECTAALLGVVNKFLIRRTNDILSKYLPV-KYEHVVFCNLAPF 536
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y ++ PEIQ L L G S P L + L
Sbjct: 537 QFDLYNYFIKSPEIQAL------------------------LRGKGSQP----LKAINIL 568
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ D S PD D V A+ +VKS G
Sbjct: 569 KKLCNHPDLL----------NMSDDLPGSEKCYPD-DYVPKEARGRD----REVKSWYSG 613
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM L++++ DKI+L S LD+ EK + Y RLDG+ N RQ LV
Sbjct: 614 KMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLV 673
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN + +FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 674 DRFNDPEGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 733
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 734 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 773
>gi|444322121|ref|XP_004181716.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
gi|387514761|emb|CCH62197.1| hypothetical protein TBLA_0G02590 [Tetrapisispora blattae CBS 6284]
Length = 1453
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 286/543 (52%), Gaps = 72/543 (13%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + +F + KD
Sbjct: 459 LKEYQLRGLEWMVSLYNNSLNGILADEMGLGKTIQSISLITHLF--------EVKKD--- 507
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PNRDMILE-KLEACGVEVLITSF 253
G L+I P S I NW +EF +W+ + IY G PN+ L+ + +VL+T++
Sbjct: 508 --PGPFLVIVPLSTITNWTLEFEKWAPSLRTIIYKGTPNQRRSLQPHIRTGDFDVLLTTY 565
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQNKIME 312
+ ++L++ +W +I+DE HR+KN +SKL Y +TRNR+ LTGT +QN + E
Sbjct: 566 EYIIKDRALLAKHDWAHMIIDEGHRMKNAQSKLSYTITHYYRTRNRLILTGTPLQNNLPE 625
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKH--GQRLTAPERFIRIADERKQHLVAVLRKYL 370
L+ L ++V P + + F E+++ P + GQ + R+ H VLR +L
Sbjct: 626 LWALLNFVLPKIFNSAKTFDEWFNTPFANTGGQEKLELTEEETLLIIRRLH--KVLRPFL 683
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K+E + + K + V+ C +S LQ++ Y ++L+ + L G+
Sbjct: 684 LRRLKKE-VEKDLPDKVEKVIKCKLSGLQQQLYEQMLK--------HNALFVGAGTEGAT 734
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K L+N +++L++I NH P DE +V
Sbjct: 735 KGGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VESVI 765
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
P + N + + + GK L++++ + G ++L+F +++DI+E
Sbjct: 766 NP-------SKTNNNLL----FRVSGKFELLDRVLPKLKASGHRVLMFFQMTQVMDIMED 814
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIF 609
FL K + RLDGST + R +++DFN+ S+ FL+STRAGGLGLNL +A+ V+IF
Sbjct: 815 FLRMKQLQYMRLDGSTKAEERTEMLNDFNAPNSEYFCFLLSTRAGGLGLNLQTADTVIIF 874
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + + +GK
Sbjct: 875 DTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKF 934
Query: 669 EKR 671
+ +
Sbjct: 935 DNK 937
>gi|351714273|gb|EHB17192.1| Chromodomain-helicase-DNA-binding protein 2 [Heterocephalus glaber]
Length = 1714
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 466 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 518
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 519 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 572
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 573 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 632
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 633 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 676
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 677 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 734
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 735 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 760
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 761 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 804
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 805 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 864
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 865 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 924
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 925 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 968
>gi|326431158|gb|EGD76728.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
Length = 1797
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 277/532 (52%), Gaps = 58/532 (10%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L +Q G+++L LY N+ GIL D+MGLGKTIQTIA L T L
Sbjct: 779 VGGTLKPYQMVGLEWLVSLYNNRLNGILADEMGLGKTIQTIALL------------TYLA 826
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN--RDMILEKLEACGVEVL 249
+ K + G LII P + + NW +EF +W+ TF+ Y G R ++ VL
Sbjct: 827 EKK-NNFGPFLIIVPLATLSNWTLEFEKWAPTFDTITYKGTKHERRAYAHRILEGRFNVL 885
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN-RIGLTGTIMQN 308
+T+++ S+LS+V W+ ++VDE HR+KN ++KL +E T R+ LTGT +QN
Sbjct: 886 VTTYEMILRERSVLSKVQWQYLVVDEGHRMKNAQNKLSRTLVEYFTSTRRLLLTGTPLQN 945
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLK---HGQRLTAPERFIRIADERKQHLVAV 365
+ EL+ L +++ P + E F +++ P +L A E+ + I L +
Sbjct: 946 NLPELWALLNFLLPDVFNSSETFDSWFNAPFAGTGENMQLDAEEKHLIIL-----QLHKI 1000
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K+E L K + V+ C MS LQ++ Y LLQ + + D
Sbjct: 1001 LRPFLLRRLKKEVETQL-PDKVEYVLRCDMSALQRKVY-ALLQKYGVTLPVEPDETKKVF 1058
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAEL 485
+ L +L N+ +++L+++ H L + + +R E
Sbjct: 1059 A-LQDASSVNKLRNM--------------IMQLRKLCCHPFLFE-------EVERAYLEH 1096
Query: 486 ASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRML 545
A+A G D + G ++CGK L++++ + + L+FS +L
Sbjct: 1097 AAAEMGMDKAALTN--------GPELWRACGKFELLDRMLPKLRAGRHRTLIFSQFTSLL 1148
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSAN 604
+LE + KG + R+DGST ++ R L+ FN+ S+ ++F++STRAGGLGLNL +A+
Sbjct: 1149 TVLEDYFAAKGIKYLRMDGSTSADDRAELLRLFNAPDSEYEIFILSTRAGGLGLNLQTAD 1208
Query: 605 RVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
V+I+D +WNP QDLQAQDR+ R GQ R V VFRL++ S+EE + R YK
Sbjct: 1209 TVIIYDSDWNPHQDLQAQDRAHRIGQTREVRVFRLVTVNSVEERILERAKYK 1260
>gi|156085062|ref|XP_001610014.1| SNF2 domain-containing protein / helicase domain-containing protein
[Babesia bovis]
gi|154797266|gb|EDO06446.1| SNF2 domain-containing protein / helicase domain-containing protein
[Babesia bovis]
Length = 829
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/560 (30%), Positives = 284/560 (50%), Gaps = 71/560 (12%)
Query: 113 FEPLVLSKDGEYPIIQ---VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKT 169
F + + + Y +I+ PA + +L HQ++GVK+L ++Y+N+HGGIL D+MGLGKT
Sbjct: 121 FSAVTVDRKQAYKLIEDVFCPADVFEKLYTHQKKGVKWLAEIYRNRHGGILADEMGLGKT 180
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSI 228
+ ++FL ++ E+ I + VLI+CP ++I W+ E +W I
Sbjct: 181 VTVLSFLNSLIFSAEAKTLNITELK-------VLIVCPITLISQWKNEMIKWCPELKPLI 233
Query: 229 YH---GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+H G + + E C LITS+++ R++ + +NW V++DE +++N +
Sbjct: 234 FHTALGSFKKHFIR--EMCQYTALITSYETLRLYIDSVCMINWSYVVLDEGQKIRNPDAS 291
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ +A L T R+ L+G+ +QN ++E ++L D+VAPG LGT F E + P+
Sbjct: 292 ITLAVKTLGTPYRLLLSGSPIQNNLVEFWSLLDFVAPGHLGTLPIFIEHFVNPIVKCSNN 351
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG-KEDNVVFCTMSDLQKRAYR 404
+ A L ++R ++ R K E L + K + V+ C +S Q Y
Sbjct: 352 SNSSLGYNCA----LRLREIVRPFIRRHVKSEFAELLKLPRKSEQVIMCNLSPAQYEMYM 407
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
LL+ + N + + E K+ +S F ++L L++ NH
Sbjct: 408 ALLKTG--SNVANDGMESLPSLQYNKREYSKKF------NSNRFLMLLTL---LRKTCNH 456
Query: 465 LELI-KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
+L+ + P D +G D+ K++
Sbjct: 457 PDLVLQERPED---------------YG-------------------DISRSTKLKVAMD 482
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYS---FSRLDGSTPSNLRQSLVDDFNS 580
++ W + GDK+L+F+ +++MLDI+ L K Y +R+DG R L++ F+S
Sbjct: 483 IIEKWEANGDKVLIFTQTIQMLDIIHDTL-AKHYGQCRMARIDGEVSIKKRAKLLESFHS 541
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ + L++TR GG+GLNL ANRV+IFDP+WNP D QA++RS+R GQ R V+++RL+
Sbjct: 542 DENMFLLLLTTRVGGVGLNLTCANRVLIFDPDWNPMTDSQARERSYRIGQNRDVVIYRLI 601
Query: 641 SAGSLEELVYTRQVYKQQLS 660
SA ++EE +Y RQ+YK +S
Sbjct: 602 SAHTVEEKIYHRQIYKFYMS 621
>gi|221481667|gb|EEE20043.1| DNA excision repair protein ERCC6, putative [Toxoplasma gondii GT1]
Length = 1553
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/589 (29%), Positives = 288/589 (48%), Gaps = 106/589 (17%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG---- 181
++VP I L HQ+ GV++L++L K GGI+GD+MGLGKTIQ +AFLAA+
Sbjct: 677 FLRVPKFIWENLYPHQQTGVRWLWQLLKQGVGGIVGDEMGLGKTIQAVAFLAALHHSGVL 736
Query: 182 --KDESSDSTILKDNKVDKKGYVLIICP-------------SSVIQNWEIEFSRWSTFNV 226
++ ++ T D G L + ++I+N E+ +
Sbjct: 737 QVRNLAAAPTENGAYVSDDAGSPLTLSALNRGVTTTPQKLLDTIIRNDEVA-------DY 789
Query: 227 SIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ + +R + +L+T+++++R+H +L W++ I+DE +++N + +
Sbjct: 790 AEFASIDRLEEAARAAEESNGILLTTYETFRMHLRLLLRYVWKMAILDEGQKIRNPHAAI 849
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+A +L T +R+ L+ T +QN + E ++L D+ APG LGT F E EP+ G
Sbjct: 850 TLAVKQLPTPHRLILSATPIQNNLQEFWSLLDFAAPGRLGTLPVFLEQIAEPITMGGYAN 909
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRR 405
A + A L V +LRR+K+E L + K + V+ C M+ Q Y
Sbjct: 910 ASRESVEAAYRCACLLRKVALPLILRRSKKEMQEFLRLPNKAEEVLLCNMTAEQYALYVD 969
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
L E E ++ D C +L L L++I+NH
Sbjct: 970 FLAASE--------------------ETLEKRDR---------CRMLFTLSVLRKIANH- 999
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
PD+ LV + E + + + GK+ L +++
Sbjct: 1000 --------------------------PDLLLVHNEVRPEDY---GNPERSGKLIVLREVL 1030
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFL--------------------IRKGYSFSRLDGS 565
W ++G ++LLF+ +V+MLDIL++FL +KG+SF RLDG
Sbjct: 1031 RVWKAEGRRVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTIGGKKGFSFLRLDGG 1090
Query: 566 TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
P R ++VD F S L++TR GG+GLNL +A+RVVIFDP+WNP D+QA++RS
Sbjct: 1091 VPVASRHAIVDSFQRDSSIFALLLTTRVGGVGLNLTAADRVVIFDPDWNPMTDMQARERS 1150
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
+R GQ + V ++RLL++GS+EE VY RQV+K LS + ++++F+
Sbjct: 1151 WRIGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQDPRQRKFFK 1199
>gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Mus
musculus]
Length = 1103
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 228 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 274
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 275 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 333
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 334 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 393
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 394 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 440
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 441 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 476
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 477 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 520
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 521 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 565
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 566 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 625
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 626 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 685
>gi|390464184|ref|XP_002806940.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Callithrix jacchus]
Length = 2054
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>gi|350630130|gb|EHA18503.1| hypothetical protein ASPNIDRAFT_128714 [Aspergillus niger ATCC
1015]
Length = 1740
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 296/585 (50%), Gaps = 80/585 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EG FLY+ + KN +G I+ D MGLGKT+Q I+ +
Sbjct: 182 KVPVVIDPRLAKVLRPHQVEG--FLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWT 239
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + E+ +TI K +I CPSS++ NW E +W + ++ +
Sbjct: 240 LLKQSPEAGVTTIQK---------CIIACPSSLVGNWANELVKWLGKDAITPFAVDGKAS 290
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ ++ +++ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 291 KTELISQMKQWAIASGRAIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRLKNKESL 350
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L + R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 351 TWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPILRGRDA 410
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
E ++ DER L ++ K+++RRT + + + K ++VVFC MS Q Y+
Sbjct: 411 AGTEEDLKKGDERLAELSGIVNKFIIRRTN-DILSKYLPVKYEHVVFCNMSAFQLGLYKH 469
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+Q PEI+ L+ PL + K+L N P L+ L
Sbjct: 470 FIQSPEIKSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLNLSNDLPGC 513
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E P P+ + +D ++ S GKM L++++
Sbjct: 514 EYTFPEDYVPPEARGRDRDIKSWY-------------------------SGKMMVLDRML 548
Query: 526 YSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
DKI+L S + LD+ EK +GY RLDG+ RQ LVD FN+ +
Sbjct: 549 ARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGE 608
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G
Sbjct: 609 EFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 668
Query: 644 SLEELVYTRQVYKQQLSNIAV-SGKLEKRYF--EGVQDCKEFQGE 685
S+EE ++ RQ +KQ LS+ V S + +R+F E +++ +F+ E
Sbjct: 669 SIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPE 713
>gi|118781335|ref|XP_311417.3| AGAP010700-PA [Anopheles gambiae str. PEST]
gi|116130122|gb|EAA07020.3| AGAP010700-PA [Anopheles gambiae str. PEST]
Length = 1026
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 204/716 (28%), Positives = 331/716 (46%), Gaps = 118/716 (16%)
Query: 20 SNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQN--PETRREKAPV 77
SN +SS ++E D + R + + + + S P ++ P+ R + P
Sbjct: 21 SNSDTTSSNTKEPDYDATLETDRGKRFEFLLKQTEIFAHFMNSAPSKSSPPKAPRGRKPK 80
Query: 78 EKSNVFDDEEKEKEQEQEK-------FGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVP 130
N + + ++ EQE+ + QF+F+ + P+ K GE
Sbjct: 81 VDKNADSSDHRHRKTEQEEDEELLAETNQKAKTQFRFEESPPY-----IKAGE------- 128
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
+ ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L +
Sbjct: 129 ------MRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYL----------- 171
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIY--HGPNRDMILEKLEACGV 246
N + G ++I P S +QNW EF RW S V + I + L
Sbjct: 172 --KNIRNNPGPHIVIVPKSTLQNWVNEFGRWCPSIRAVCLIGDQETRTAFIRDVLMPGEW 229
Query: 247 EVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
+V ITS++ ++ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +
Sbjct: 230 DVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPL 289
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + EL+ L +++ P + + F ++D + I + L AVL
Sbjct: 290 QNNLHELWALLNFLLPDIFNSADDFDSWFD-----ANQCMGDNSLI-------ERLHAVL 337
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
+ +LLRR K E L+ KE + F +S +Q+ Y ++L
Sbjct: 338 KPFLLRRLKSEVEKRLLPKKEVKI-FVGLSKMQREWYTKIL------------------- 377
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
K +D ++G + L++L++ +NH L D
Sbjct: 378 -------MKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLF-------------DGAEP 417
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
+ D L+ ++ GKM L+KL+ + ++L+FS RMLD
Sbjct: 418 GPPYTTDYHLL---------------ENAGKMVVLDKLLRKLQEQDSRVLIFSQMTRMLD 462
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANR 605
ILE F +GY + RLDG TP R +++ D+N+ S K +F++STRAGGLG+NL +A+
Sbjct: 463 ILEDFCHWRGYQYCRLDGQTPHEDRSNMIADYNAENSTKFIFMLSTRAGGLGINLATADV 522
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L + +
Sbjct: 523 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLKLDKLVIQ 582
Query: 665 SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSE----IIESHEEQGQQQ 716
G+L + + FG ++F+ D+ T E I++ EE+ Q+Q
Sbjct: 583 QGRLVDNKTTQLNKDEMLNIIRFGANHVFQS-RDSEITDEDIDAILQKGEEKTQEQ 637
>gi|350583049|ref|XP_003355071.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Sus
scrofa]
Length = 895
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 285/552 (51%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+PI+ V + L HQREG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 267 FPIVDVVIDPHLVYHLRPHQREGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLI 326
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 327 WTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDPDH 378
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E ++ VLI S++ + + ++++I DE HRLKN K A L
Sbjct: 379 KVEEFTKSPLYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALFSLPC 438
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI LTGT +QN + E ++L D+V PG LG+ +R+ Y+EP+ ++ +A + +
Sbjct: 439 EKRIILTGTPVQNDLQEFFSLIDFVNPGILGSLSCYRKIYEEPIITSRQPSASQEEKELG 498
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R L + ++LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 499 ERRACELTCLTGLFILRRT-QEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFC 557
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ + S S L + K+L N PCL+ S+ E + DE
Sbjct: 558 LQGLMENS--SHLICIGALKKLCN------------HPCLL----FSSVKEKECSSAWDE 599
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
+++R +L VF PD + + A+ ES GK++ L KL+ +
Sbjct: 600 NEERRLYEDLLK-VFPPDYNPLMF-AEEES----------GKLQVLSKLLAVIHELRPAE 647
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY +RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 648 KVVLVSNYTQTLNILQEVCRRHGYGCTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSK 707
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 708 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 767
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 768 QISKQDLSGAVV 779
>gi|344284165|ref|XP_003413840.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Loxodonta
africana]
Length = 1902
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 573 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 625
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 626 ------GPFLIVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 679
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 680 RFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 739
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 740 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 783
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 784 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 841
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 842 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 867
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 868 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 911
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 912 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 971
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 972 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 1031
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 1032 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 1075
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 289/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 156 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 202
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 203 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 262
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 263 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 322
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + + F ++D G Q+L + L AVL+ +LL
Sbjct: 323 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 369
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y R+L
Sbjct: 370 RRIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTRIL------------------------ 404
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 405 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 449
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D L+ + GKM L+KL+ +G ++LLFS R+LDILE +
Sbjct: 450 TDTHLIT---------------NSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDY 494
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 495 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYD 554
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 555 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 614
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 615 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTEEDITTILERGEKK 660
>gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Mus
musculus]
Length = 1110
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 235 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 281
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 282 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 340
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 341 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 400
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 401 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 447
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 448 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 483
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 484 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 527
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 528 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 572
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 573 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 632
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 633 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 692
>gi|426200084|gb|EKV50008.1| hypothetical protein AGABI2DRAFT_183150 [Agaricus bisporus var.
bisporus H97]
Length = 820
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 296/570 (51%), Gaps = 69/570 (12%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGV+FLYK + N++G I+ D+MGLGKT+Q IA +
Sbjct: 214 KVPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMWT 273
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + ++ +I+CPSS+++NW E +W + +++ + +
Sbjct: 274 LLKQSPHAGKPTIEK--------CIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGK 325
Query: 235 DMILEKLE----ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+L KL+ A G V +I S+++ R + L+ +++ DE HRLKN ++
Sbjct: 326 AELLPKLQRWVSARGRNVTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQT 385
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ + G+
Sbjct: 386 FQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDAL 445
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + ++++ + L +++ K+++RRT + +L + K ++VVFC +SD Q YR
Sbjct: 446 ASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPV-KYEHVVFCHLSDFQLSLYRLF 504
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ P+I+ L+ + PL + K+L N P L LP +K +
Sbjct: 505 ITSPDIKALLRG----TESQPLKAINLLKKLCN------HPDLLDLPSELKGSE-----N 549
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ P+ + + AV S G GK LE+ ++
Sbjct: 550 LLPPDYTGTKGGGGRGGDRNPAV--------------RSEWG-------GKFIVLERFLH 588
Query: 527 SW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
A DKI+L S + LD+ EK K Y F RLDG N RQ LVD FN K+
Sbjct: 589 RIRAESNDKIVLISNYTQTLDLFEKLCRNKKYGFFRLDGKMTINKRQKLVDQFNDPNGKE 648
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G+
Sbjct: 649 FIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGT 708
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
+EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 709 IEEKIFQRQANKQALSSAVVDEKEDTERHF 738
>gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767]
gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 282/545 (51%), Gaps = 89/545 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I+ +L +Q +G+ +L LY+N GIL D+MGLGKT+QTI+FL +
Sbjct: 146 PGYIHGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISFLGYL---------- 195
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG---PNRDMILEKLEACG 245
+ G +II P S + NW EF+RW+ V + G ++I ++L AC
Sbjct: 196 ---RYMRNINGPHIIIVPKSTLDNWAREFARWTPDVRVLVLQGDKDSRHELIQKRLLACD 252
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V+++S++ + + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 253 FDVVVSSYEIVIREKASFRKFAWEYIIIDEAHRIKNEESLLSQIIRMFHSRNRLLITGTP 312
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFY--DEPLKHGQRLTAPERFIRIADERKQHLV 363
+QN + EL+ L +++ P G E F +++ D +HG E + + L
Sbjct: 313 LQNNLHELWALLNFILPDVFGDSETFDQWFQNDNKDEHG---NGKEEDVIL------QLH 363
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VL+ +LLRR K + L+ +E N ++ +MSD+Q++ Y+++L+ KD+
Sbjct: 364 KVLQPFLLRRIKSDVEKSLLPKQEVN-LYVSMSDMQRKWYQKILE---------KDIDAV 413
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQR 480
G+ + E RL N+ +++L++ NH E +P P
Sbjct: 414 NGA--NKKESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP-------- 449
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
F D LV N+Q KM L+KL+ + +G ++L+FS
Sbjct: 450 --------PFTTDEHLV-YNSQ--------------KMIILDKLLKKFKQEGSRVLIFSQ 486
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLN 599
RMLDI+E + + + Y + R+DG T R + +D++N SK VFL++TRAGGLG+N
Sbjct: 487 MSRMLDIMEDYCMFRDYEYCRIDGQTDHADRVNAIDEYNEPGSSKFVFLLTTRAGGLGIN 546
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L +A+ V++FD +WNP DLQA DR+ R GQ + V VFR +S ++EE V R K +L
Sbjct: 547 LTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVRVFRFVSENAIEEKVLERATQKLRL 606
Query: 660 SNIAV 664
+ +
Sbjct: 607 DQLVI 611
>gi|432106413|gb|ELK32206.1| DNA repair and recombination protein RAD54B [Myotis davidii]
Length = 817
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 281/552 (50%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+P++ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ L
Sbjct: 187 FPVVDVVIDPHLAYYLRPHQKEGLIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLL 246
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + I+K LI+ P S++ NW EF +W + + I+
Sbjct: 247 WTLQCQGPYGGKPIIKKT--------LIVTPGSLVNNWRREFQKWLGSERIKIFTVDQDH 298
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E +++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 299 KVEEFIKSPLYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLAC 358
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI LTGT +QN + E + L D+V PG LG+ FR+ Y+EP+ ++ +A + +
Sbjct: 359 EKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSFRKIYEEPIIVSRQPSASKEDKELG 418
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ R LV + LRRT +E I + K +NVVFC LQ Y++LL ++
Sbjct: 419 ERRAAELVCFTGLFFLRRT-QEVINKYLPPKIENVVFCRPGALQLELYQKLLNSQAVRFC 477
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L ++ P L C+ L+++ NH L+ + +++
Sbjct: 478 LQGSL-----------------------ENSPH---LICIGALKKLCNHPCLLFNSIKEK 511
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D S+++ +++ + F K GK++ L KL+ D
Sbjct: 512 ECSSTWDEHEESSLYEGLLNVFPADYNPLMFTE----KESGKLQVLTKLLAVIHELRPTD 567
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
+++L S + L+IL++ R GY+ +RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 568 RVVLVSNYTQTLNILQEVCKRHGYACTRLDGQTPVSQRQQIVDGFNSKYSSDFIFLLSSK 627
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 628 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 687
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 688 QISKQGLSGAVV 699
>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
206040]
Length = 802
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 284/572 (49%), Gaps = 77/572 (13%)
Query: 125 PIIQVPASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAV 179
P++ P C L HQ EGVKF+YK + G I+ D+MGLGKT+Q I + +
Sbjct: 202 PVVIDPKIAKC-LRPHQIEGVKFMYKCVTGLVDEKAQGCIMADEMGLGKTLQCITLMWTL 260
Query: 180 FGKDESS-DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV----SIYHGPNR 234
+ S+ STI K +++CP+S+++NW E ++W N +I +
Sbjct: 261 LKQSPSAGKSTIQK---------AIVVCPASLVKNWANELTKWLGPNAINPFAIDGKAPK 311
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ + +L + V+I S+++ R++ L ++ DE HRLKN S
Sbjct: 312 EELKRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNADSNT 371
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A +LK R+ LTGT +QN + E + L + P LG+R FR+ ++ P+ G+
Sbjct: 372 FNALNDLKVSRRVILTGTPIQNDLTEYFALTSFANPDLLGSRLEFRKRFEIPILRGRDAD 431
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A E+ R DE L+ V+ K+L+RRT + + + K ++VVFC ++ Q Y
Sbjct: 432 ASEQDRRRGDECTSELLGVVNKFLIRRT-NDILSKYLPVKYEHVVFCNLAPFQLDLYNYF 490
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ P+IQ L L G S P L + L+++ NH +
Sbjct: 491 ITSPDIQAL------------------------LRGKGSQP----LKAINILKKLCNHPD 522
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
L+ LA + G + G ES D+K GKM+ L+++
Sbjct: 523 LL---------------NLADDLPGSEKCFPGDYVPKESRGRDRDIKPWYSGKMQVLDRM 567
Query: 525 MYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ DKI+L S LD+ E+ + Y RLDG+ N RQ LVD FN
Sbjct: 568 LAKIREDTNDKIVLISNYTSTLDLFERLCRDRQYGCLRLDGTMNVNKRQKLVDRFNDPNG 627
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
+ +FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 628 DEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 687
Query: 643 GSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 688 GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 719
>gi|350645258|emb|CCD60039.1| hypothetical protein Smp_130470 [Schistosoma mansoni]
Length = 3580
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 290/605 (47%), Gaps = 102/605 (16%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASI----- 133
+S ++D E Q+ + + + ++ PF P +D Y II+ S
Sbjct: 1105 RSLAYEDATWELSQDVDPTKVKEFYKRRYPPRNPFIP----RDNNYKIIRPDPSTWKPID 1160
Query: 134 -------NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
N +L ++Q EGV +L + + IL D+MGLGKT+Q++ FL +F
Sbjct: 1161 SNTVYKNNNKLRDYQVEGVNWLTFCWYHHRNCILADEMGLGKTVQSVTFLLEIF------ 1214
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN--RDMILE----- 239
K + +G LII P S + NW+ EF WS FNV IYHG + R MI E
Sbjct: 1215 --------KANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYHGSSVSRSMIQEYEMFY 1266
Query: 240 --------KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
+ + V++T+F+ +++W ++DEAHRLKN+K KL
Sbjct: 1267 RKRTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHWAAAVIDEAHRLKNKKCKLGEGLR 1326
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
L +R+ LTGT +QN + EL+ L +++ P F Y E LK
Sbjct: 1327 YLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEYGE-LK----------- 1374
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
+E+ + L VL+ +LRR KE+ + + KE+ VV ++++QK+ YR +++
Sbjct: 1375 ---TEEQVERLKTVLKPMMLRRLKED-VEKSLAPKEETVVEVELTNIQKKYYRAIME--- 1427
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
++ C T NL + +++L++ NH LI
Sbjct: 1428 ------RNFSFLCKGSSTNAP------NL-----------MNIMMELRKCCNHPFLI--- 1461
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
K +DA L+ + + + V + GK+ + KL+ +
Sbjct: 1462 ------KGAEDAILS------EFQANDNTLSEDDLTFRTMVYASGKLVLIHKLLPKLRAD 1509
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
G K+L+FS +R+LDILE +L+ +G+ F R+DG LRQ +D F+ P K VFL+ T
Sbjct: 1510 GHKVLIFSQMIRVLDILEDYLVHQGFQFERIDGRIHGPLRQEAIDRFSIDPDKFVFLLCT 1569
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGGLG+NL +A+ V+I+D +WNP DLQAQ R R GQ++ V V+RL++ + E ++
Sbjct: 1570 KAGGLGINLTAADVVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLITRNTYEREMFD 1629
Query: 652 RQVYK 656
R K
Sbjct: 1630 RASLK 1634
>gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni]
Length = 3580
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 290/605 (47%), Gaps = 102/605 (16%)
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASI----- 133
+S ++D E Q+ + + + ++ PF P +D Y II+ S
Sbjct: 1105 RSLAYEDATWELSQDVDPTKVKEFYKRRYPPRNPFIP----RDNNYKIIRPDPSTWKPID 1160
Query: 134 -------NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
N +L ++Q EGV +L + + IL D+MGLGKT+Q++ FL +F
Sbjct: 1161 SNTVYKNNNKLRDYQVEGVNWLTFCWYHHRNCILADEMGLGKTVQSVTFLLEIF------ 1214
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN--RDMILE----- 239
K + +G LII P S + NW+ EF WS FNV IYHG + R MI E
Sbjct: 1215 --------KANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYHGSSVSRSMIQEYEMFY 1266
Query: 240 --------KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
+ + V++T+F+ +++W ++DEAHRLKN+K KL
Sbjct: 1267 RKRTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHWAAAVIDEAHRLKNKKCKLGEGLR 1326
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
L +R+ LTGT +QN + EL+ L +++ P F Y E LK
Sbjct: 1327 YLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEYGE-LK----------- 1374
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
+E+ + L VL+ +LRR KE+ + + KE+ VV ++++QK+ YR +++
Sbjct: 1375 ---TEEQVERLKTVLKPMMLRRLKED-VEKSLAPKEETVVEVELTNIQKKYYRAIME--- 1427
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
++ C T NL + +++L++ NH LI
Sbjct: 1428 ------RNFSFLCKGSSTNAP------NL-----------MNIMMELRKCCNHPFLI--- 1461
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
K +DA L+ + + + V + GK+ + KL+ +
Sbjct: 1462 ------KGAEDAILS------EFQANDNTLSEDDLTFRTMVYASGKLVLIHKLLPKLRAD 1509
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
G K+L+FS +R+LDILE +L+ +G+ F R+DG LRQ +D F+ P K VFL+ T
Sbjct: 1510 GHKVLIFSQMIRVLDILEDYLVHQGFQFERIDGRIHGPLRQEAIDRFSIDPDKFVFLLCT 1569
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGGLG+NL +A+ V+I+D +WNP DLQAQ R R GQ++ V V+RL++ + E ++
Sbjct: 1570 KAGGLGINLTAADVVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLITRNTYEREMFD 1629
Query: 652 RQVYK 656
R K
Sbjct: 1630 RASLK 1634
>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
Length = 808
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 289/571 (50%), Gaps = 76/571 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + +N +G I+ D+MGLGKT+Q I+ +
Sbjct: 202 KVPVVIDPRLAKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLMWT 261
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPN 233
+ + E+ +T+ K +I CPS++++NW E +W + I
Sbjct: 262 LLKQSPEAGKTTVQK---------CVIACPSTLVRNWANELVKWLGPDAVIPFVIDGKAT 312
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
+ + +L+ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 313 KAELSSQLKQWAIASGRAIVRPVLIVSYETLRLNIEDLRDTPIGLLLCDEGHRLKNKESL 372
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ L R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 373 TWKELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKRFEIPILRGRDA 432
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
A + + DER L ++ K+++RRT + +L + K ++VVFC +S+ Q Y
Sbjct: 433 AASDEDRKKGDERLAELSTIVNKFIIRRTNDILSKYLPI-KYEHVVFCNLSEFQLNLYNY 491
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
LQ PEI+ L+ PL + K+L N P L+ L +
Sbjct: 492 FLQSPEIRSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLDLSRDLPGC 535
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E P+ PD + +D ++ S GKM L++++
Sbjct: 536 EQYFPDDYVPPDGRGRDRDIKSWY-------------------------SGKMMVLDRML 570
Query: 526 YSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN +
Sbjct: 571 ARIRQDTNDKIVLISNYTQTLDLFEKLCRARAYGCLRLDGTMNVNKRQKLVDKFNDPNGE 630
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G
Sbjct: 631 EFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 690
Query: 644 SLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
S+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 691 SIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 721
>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
Length = 853
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 282/551 (51%), Gaps = 77/551 (13%)
Query: 137 LLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLYK + K +G I+ D+MGLGKT+Q IA L T+L
Sbjct: 272 LRPHQIEGVKFLYKCVTGRIDKVANGCIMADEMGLGKTLQCIALLW-----------TLL 320
Query: 192 KDNKVDKKGYV---LIICPSSVIQNWEIEFSRW---STFNVSIYHGPN--RDMILEKLEA 243
K + + K + +I CPSS+++NW E +W I G + +++I L+
Sbjct: 321 KQSPLGGKPTIEKAIITCPSSLVKNWANELVKWLGKDAVTPFIVDGKSTKQELIEALLQW 380
Query: 244 CGVE-------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
V VLI S+++ R + L +++ DE HRLKN +S + A L R
Sbjct: 381 AHVRGRQITRPVLIVSYETLRSYVEYLKGAEVGLLLCDEGHRLKNSESLTFTALNSLDVR 440
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E ++L ++ PG LG+R+ FR+ Y+ P+ G+ E+ + D
Sbjct: 441 RRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNYEIPILRGRDADGSEKDKELGD 500
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ L +++ ++++RRT + + + K ++VVFC +S+ Q Y + PEI+
Sbjct: 501 AKLAELSSIVNRFIIRRT-NDILSKYLPVKYEHVVFCNLSEFQTALYSYFITSPEIR--- 556
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
K L + PL + K+L N P L+ + + E + P
Sbjct: 557 -KILRGAGSQPLKAIGILKKLCN------------HPDLLHITEDFEGCEKLFPQGFVPK 603
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKI 535
+ + +D + S++ GKM LE+++Y + DKI
Sbjct: 604 EHRGRDRHVDSSL-------------------------SGKMLVLERMLYRIKKETDDKI 638
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRA 593
+L S LD+ E+ +GY RLDG+ + RQ LVD+FN P K VFL+S++A
Sbjct: 639 VLISNYTSTLDLFEQVCRTRGYKALRLDGTMNVSKRQRLVDEFN-DPEKDAFVFLLSSKA 697
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++ RQ
Sbjct: 698 GGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQ 757
Query: 654 VYKQQLSNIAV 664
+KQ LS+ V
Sbjct: 758 SHKQSLSSCVV 768
>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
Length = 831
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 301/592 (50%), Gaps = 88/592 (14%)
Query: 120 KDGEYPIIQVPASINCRLLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIA 174
K+ + P++ P + L HQ EGVKFLYK + +N +G I+ D+MGLGKT+Q IA
Sbjct: 212 KEDKVPVVIDPV-LGKVLRPHQVEGVKFLYKCTTGAIVENAYGCIMADEMGLGKTLQCIA 270
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-----STFNVSIY 229
+ + + + +DK +I CPSS+++NW E +W + +S+
Sbjct: 271 LMHTLLKQSPRAQKPT-----IDK---AIIACPSSLVKNWGNELVKWLGKDGAPGILSVD 322
Query: 230 HGPNRDMILEKLE---ACGVE-----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
+ + ++E ++ A G V+I S+++ R + L +++ DE HRLKN
Sbjct: 323 NKGTKAELIESVKRWVAAGGRNVTQPVMIVSYETLRTLCAELMNCEIGLLLCDEGHRLKN 382
Query: 282 EKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH 341
S + A LK + R+ L+GT +QN + E ++L ++ P LG+R FR+ ++ +
Sbjct: 383 SDSLTFQALNGLKVQRRVILSGTPIQNDLSEYFSLLNFANPDYLGSRMEFRKNFELAILR 442
Query: 342 GQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKR 401
G+ A ++ ++ + + L + K+++RRT + +L + K ++VVFCT+S LQ
Sbjct: 443 GRDADATDKEKENSEAKLKELAERVSKFIIRRTNDLLSKYLPV-KYEHVVFCTLSPLQLA 501
Query: 402 AYRRLLQLPEIQCLINKDLPCSCGS-PLTQVECCKRLDN----------LDGCDSCPFCL 450
YR ++ PE Q L+ GS PL + K+L N L GCDS
Sbjct: 502 LYRHFIKSPETQRLLRGQ-----GSQPLKAINLLKKLCNHPELLNLPEDLPGCDS----- 551
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG-PDIDLVGGNAQNESFIGL 509
VLP E ++++G P + A++ G+
Sbjct: 552 VLP-----------------------------PEYGNSLYGGPKVSRAERGARDR---GM 579
Query: 510 SDVKSC---GKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS 565
+ C GK LE+ + + DKI+L S + LD+ EK K Y F RLDG+
Sbjct: 580 GEDVRCEWGGKFLVLERFLDRIKRETNDKIVLISNYTQTLDLFEKMCRSKRYGFFRLDGT 639
Query: 566 TPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDR 624
RQ LVD FN K+ VFL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R
Sbjct: 640 MSVVKRQKLVDQFNDPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALAR 699
Query: 625 SFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYFEG 675
+R GQK+ V+R +S G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 700 VWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSCVVDEKEDAERHFSA 751
>gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus]
Length = 911
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 275/537 (51%), Gaps = 48/537 (8%)
Query: 137 LLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + ++
Sbjct: 296 LRPHQKEGIIFLYECVMGMRMDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 355
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S++ NW EF +W + + I+ + E ++ VLI
Sbjct: 356 KK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFVQCMFYSVLI 407
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + + ++++I DE HRLKN K A + L RI LTGT +QN +
Sbjct: 408 ISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDL 467
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + L D+V PG LG+ +R+ Y+EP+ + +A E ++ + R L + ++
Sbjct: 468 QEFFALIDFVNPGILGSLSSYRKIYEEPIIVSREPSASEEEKKLGERRAAELTCLTGLFV 527
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 528 LRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRF---------------- 570
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
C + L +S P L C+ L+++ NH L+ +++ + + +++
Sbjct: 571 --CLQGLS-----ESSPHLL---CIGALKKLCNHPCLLFSTAKEKESSSSCNEDEERSLY 620
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDIL 548
+++ + F + GK++ L KL+ +K++L S + L+IL
Sbjct: 621 KGLLNVFPADYNPLLFTE----EESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL 676
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
++ R GY+ +RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + ++
Sbjct: 677 QEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLI 736
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 737 LYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVV 793
>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
Length = 805
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 289/578 (50%), Gaps = 78/578 (13%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
DGE+P +VP I+ +L + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q
Sbjct: 198 DGEHP--RVPVVIDPKLAKILRPHQVEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQ 255
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV---- 226
I+ + + + E+ STI K +++CP+S+++NW E +W N
Sbjct: 256 CISLMWTLLKQSPEAGKSTIQK---------AIVVCPASLVKNWANELVKWLGANAIHPF 306
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L + V+I S+++ R++ L ++ DE HR
Sbjct: 307 AIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHR 366
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S + A L R+ LTGT +QN + E ++L + P LGTR+ FR+ ++ P
Sbjct: 367 LKNGDSNTFNALNSLNVTRRVILTGTPIQNDLTEYFSLTSFANPNLLGTRQEFRKRFEIP 426
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L++V+ K+L+RRT + + + K ++VVFC ++
Sbjct: 427 ILRGRDADASEADRKKGDECTGELLSVVNKFLIRRT-NDILSKYLPVKYEHVVFCNLAPF 485
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y ++ P+IQ L+ PL + K+L N P L+ L
Sbjct: 486 QFDLYNYFIKSPDIQALLRG----KGSQPLKAINILKKLCN------------HPDLLNL 529
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
E P + + +D E+ S GKM
Sbjct: 530 SDDLPGSEGCCPEDFVPKESRGRDREVKSWY-------------------------SGKM 564
Query: 519 RALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
L++++ DKI+L S LD+ E+ + Y RLDG+ N RQ LVD
Sbjct: 565 AVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDR 624
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN + VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V
Sbjct: 625 FNDPNGDEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFV 684
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 685 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|393216995|gb|EJD02485.1| DNA repair protein, SNF2 family [Fomitiporia mediterranea MF3/22]
Length = 814
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 282/552 (51%), Gaps = 71/552 (12%)
Query: 137 LLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY+ +N++G I+ D+MGLGKT+Q IA + + + +
Sbjct: 222 LRPHQIEGVKFLYRCTTGMTIENQYGCIMADEMGLGKTLQCIALMYTLLKQSPRAVRPT- 280
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL------ 241
+DK +I CPSS+++NW E ++W + ++++ + ++EK+
Sbjct: 281 ----IDK---CIIACPSSLVRNWANELTKWLGPEAPGSLAVDGKGTKAELIEKVARWVAA 333
Query: 242 --EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ V+I S+++ R L+ +++ DE HRLKN S + A L + R+
Sbjct: 334 SGKTVTQPVMIVSYETLRTLSEYLANCTIGLLLCDEGHRLKNSDSLTFQALNALNVKRRV 393
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
L+GT +QN + E ++L ++ P LG++ FR+ ++ + G+ A ++ + +
Sbjct: 394 ILSGTPIQNDLSEYFSLLNFANPNYLGSKGDFRKNFENAIIRGRDADASDQVKAACENKL 453
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
+ L +++ +++RRT + +L + K ++VVFC +SD Q YR + PEI+ L
Sbjct: 454 KELGSMVTPFIIRRTNDLLSKYLPV-KYEHVVFCGLSDFQLALYRLFITSPEIKAL---- 508
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
L G +S P L + L+++ NH EL+ D P+
Sbjct: 509 --------------------LRGTNSQP----LKAINILKKLCNHPELL-----DLPNDL 539
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC---GKMRALEKLMYSWASK-GDKI 535
+ L F G Q G + C GK LE+ ++ ++ GDKI
Sbjct: 540 QGSEGLIPEGFV-------GAGQTARERGRNQGVRCDWGGKFLVLERFLHRIRTETGDKI 592
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK KGY RLDG+ + RQ LVD FN + VFL+S++AG
Sbjct: 593 VLISNYTQTLDLFEKLCRSKGYGCFRLDGTMTVSKRQKLVDQFNDPNRPEFVFLLSSKAG 652
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G++EE ++ RQ
Sbjct: 653 GCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQA 712
Query: 655 YKQQLSNIAVSG 666
KQ LS+ V
Sbjct: 713 QKQALSSAVVDA 724
>gi|367010464|ref|XP_003679733.1| hypothetical protein TDEL_0B03930 [Torulaspora delbrueckii]
gi|359747391|emb|CCE90522.1| hypothetical protein TDEL_0B03930 [Torulaspora delbrueckii]
Length = 1078
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 275/550 (50%), Gaps = 84/550 (15%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D Y P IN L +Q +G+ +L L++N GIL D+MGLGKT+QTIAFL +
Sbjct: 123 DIAYQFSDSPTFINGSLRSYQIQGLNWLISLHQNGLAGILADEMGLGKTLQTIAFLGYL- 181
Query: 181 GKDESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD--- 235
++K G L+I P S + NW E +RW+ N I G +
Sbjct: 182 -------------RYIEKVPGPFLVIAPKSTLNNWLREINRWTPEVNALILQGTKEERSE 228
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I ++L AC ++ I S++ S + +W+ +++DEAHR+KNE+S L E +
Sbjct: 229 IIRDRLLACDFDICIASYEIIIREKSYFKKFDWQYIVIDEAHRIKNEESMLSQVLREFSS 288
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNR+ +TGT +QN + EL+ L +++ P + F ++ + E
Sbjct: 289 RNRLLITGTPLQNNLHELWALLNFLLPDIFADSQDFDAWF-----------SSEATDEDQ 337
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D+ + L VL+ +LLRR K + L+ KE N V+ MS +QK+ Y+++L+
Sbjct: 338 DKIVKQLHTVLQPFLLRRIKNDVEKSLLPKKELN-VYVGMSKMQKKWYKQILE------- 389
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
KDL ++ E RL N+ +++L++ NH L
Sbjct: 390 --KDLDAVNAESGSK-ESKTRLLNI--------------VMQLRKCCNHPYLF------- 425
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
D + D LV +A K+ L+KL+ + +G ++
Sbjct: 426 ------DGAEPGPPYTTDEHLVYNSA---------------KLNVLDKLLKNLKEQGSRV 464
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAG 594
L+FS R+LDI+E + + Y + R+DGST R +D++NS SK +FL++TRAG
Sbjct: 465 LIFSQMSRVLDIMEDYCYFREYEYCRIDGSTAHEDRIKAIDEYNSPGSSKFIFLLTTRAG 524
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR ++ S+EE + R
Sbjct: 525 GLGINLTTADAVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKILERAT 584
Query: 655 YKQQLSNIAV 664
K +L + +
Sbjct: 585 QKLRLDQLVI 594
>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
Length = 857
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 279/545 (51%), Gaps = 61/545 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFG 181
I V + + +L EHQR G+ FLY+ N G IL D+MGLGKT+Q I + +
Sbjct: 268 ILVDSCLVAKLREHQRHGIVFLYECLMGLKVPNYFGAILADEMGLGKTLQCITLIWTMLK 327
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEK 240
K I + VLI+ PSS+ NWE EF +W + Y ++ +
Sbjct: 328 KGPYGKPIIKR---------VLIVTPSSLCNNWEKEFVKWLGRHRIFPYVIGGKNKPKDF 378
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
++ ++I S++ + + ++E+ +++++ DE HRLKN K E+ + RI
Sbjct: 379 IKYPRNSIMIISYEMFIKCHTEINEMTFDLIVCDEGHRLKNSNIKAAKMLNEINCKKRIV 438
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QN + E Y L D+V PG LGT ++ +Y+EP+ Q +A + + + +ER
Sbjct: 439 LTGTPIQNDLKEFYALIDFVNPGILGTPNEYKSYYEEPIIAAQYSSADDDVLSLGNERSA 498
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L + ++LRR+ ++ I + K + V+FC+++ QK Y + NK
Sbjct: 499 ELYKHTKSFILRRS-QKAINKYLPYKYEIVLFCSLTKKQKDLYSLI-----TDAWFNKI- 551
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
C + N+ L + L++I NH L +E +K
Sbjct: 552 ------------CLEDKSNIH----------LSIITALKKICNHPNLF----LNEEEKAL 585
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
D L+ + I ++E+F + CGK+ ++ LM + +K++L SY
Sbjct: 586 YDV-LSKVSYLSQI------KRDENF-----TEYCGKVTIVQTLMRNLKKTDEKLVLVSY 633
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLN 599
+ LD+LE + F RLDG+T S +R + + FN+ + + +V L+S +AGG+GLN
Sbjct: 634 YTQTLDLLETICNMERLKFLRLDGATSSTIRLKITEQFNTQTDNSKVLLLSAKAGGVGLN 693
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L A+R+V+FD +WNPA D+QA R +R GQKR+V ++RLL+ G++EE +Y RQ+ K L
Sbjct: 694 LPGASRLVLFDSDWNPASDMQAMARIWRDGQKRNVYIYRLLTTGTIEEKIYQRQISKANL 753
Query: 660 SNIAV 664
S V
Sbjct: 754 SETVV 758
>gi|297797399|ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
lyrata]
gi|297312419|gb|EFH42843.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
lyrata]
Length = 1097
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/579 (29%), Positives = 295/579 (50%), Gaps = 75/579 (12%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L HQR+G+K+L+ L+ GGILGDDMGLGKT+Q +FLA +F S
Sbjct: 376 LPGKIATMLYPHQRDGLKWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLF------HS 429
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGPN---RDMILEKLEAC 244
++K L++ P +++ +W E + ++ Y+G + R+ L +
Sbjct: 430 KLIK--------RALVVAPKTLLPHWMKELATVGLSKMTREYYGTSTKAREYDLHHI-LQ 480
Query: 245 GVEVLITSFDSYRIHGSIL------------SEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
G VL+T++D R + L + W+ +I+DE H +KN ++ + LE
Sbjct: 481 GKGVLLTTYDIVRNNTKALQGDDHYTDEDDEDGIKWDYMILDEGHLIKNPNTQRAKSLLE 540
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
+ + +RI ++GT +QN + EL+ LF++ PG LG + F++ Y+ + G A +R
Sbjct: 541 IPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQ 600
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIG-----HLMMGKEDNVVFCTMSDLQKRAYRRLL 407
RI ++L ++ + LRR K E G + K++ VV+ ++ Q++ Y
Sbjct: 601 RIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY---- 656
Query: 408 QLPEIQCLINKDLPCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ +N ++ S GSPL + K++ CD P L+ + + L
Sbjct: 657 -----EAFLNSEIVLSAFDGSPLAALTILKKI-----CDH-------PLLLTKRAAEDVL 699
Query: 466 ELIKP--NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEK 523
E + P + +R +A N + F +D SC K+ +
Sbjct: 700 EGMDSTLTPEEAGVAERLAMHIAD------------NVDTDDFQTKNDSISC-KLSFIMS 746
Query: 524 LMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
L+ + +G ++L+FS + +ML++++ L GYSF R+DG+T + R V++F
Sbjct: 747 LLDNLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHV 806
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+FL++++ GGLGL L A+RV++ DP WNP+ D Q+ DR++R GQ + VIV+RL+++
Sbjct: 807 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSA 866
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
++EE +Y +QVYK L A K + RYF QD +E
Sbjct: 867 TVEEKIYRKQVYKGGLFKTATEHKEQIRYF-SQQDLREL 904
>gi|429963291|gb|ELA42835.1| hypothetical protein VICG_00150 [Vittaforma corneae ATCC 50505]
Length = 810
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 306/618 (49%), Gaps = 106/618 (17%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAV-FGK 182
Y P + L ++Q EG+ +L K+++N IL D+MGLGKT+QTIAFL + F K
Sbjct: 39 YIFTYSPKYVRVTLRDYQIEGLNWLIKMHENGINCILADEMGLGKTLQTIAFLGYLKFVK 98
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEK- 240
DE K LI P S +QNW EFS++ V I+H ++ E
Sbjct: 99 DE--------------KNKHLIAVPKSCLQNWHDEFSKFIPEMKVKIFHTSKSEIKKESK 144
Query: 241 -LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
L + ++T+++ S L +VNW +I+DEAHRLKNE S+L ++R+
Sbjct: 145 VLIDKNYDAILTTYEMCLFAKSYLKDVNWSYIIIDEAHRLKNENSQLSKIVRLFNFKHRL 204
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
LTGT +QN I EL+ L +++ P E F E ++ AD+ +
Sbjct: 205 LLTGTPLQNNIHELWALLNFIVPDFFSNSEKF-----------------ENYVLNADKEE 247
Query: 360 ---QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ L VL+ + LRR K + +LM K N+ +C +S +Q+ Y+ +L+
Sbjct: 248 KSIEKLRNVLQLFFLRREKIDVEKNLMAKKYVNI-YCPLSGMQREWYKSILK-------- 298
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
KDL G L + G + +L +++L++ NH L +
Sbjct: 299 -KDL---SGIYLDR-----------GIKTT----LLNIVMQLKKCCNHPYLFE------- 332
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESF-IGLSDVKSCGKMRALEKLMYSWASKGDKI 535
A+ E F G + + GKM L+KL+ SKG ++
Sbjct: 333 -----------------------GAEPEPFETGEHLIYNSGKMIILDKLLSRLKSKGSRV 369
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAG 594
L+FS +MLDILE + + + YS+ R+DG T S R + ++ +N+ S K +FL++TRAG
Sbjct: 370 LIFSQMSQMLDILEDYAVFRDYSYCRIDGKTSSEDRTAAIEAYNALDSDKFLFLLTTRAG 429
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL +A+ V+IFD +WNP DLQAQDR+ R GQK+ V VFR ++ ++EE +Y R
Sbjct: 430 GLGINLYTADTVIIFDSDWNPQADLQAQDRAHRIGQKKQVHVFRFITDNTIEEGIYLRAQ 489
Query: 655 YKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQ 714
K +L +I + E + V + EL I + D+S N+ T +E ++G+
Sbjct: 490 QKLKLDDILIQK--EHKINHSVT-----ENELMDILSHGIDISQNVSTDMSLEEILKKGE 542
Query: 715 QQERHHCTN-QGFKGLET 731
+ R + Q FK +T
Sbjct: 543 DKTREFESRIQSFKIADT 560
>gi|348540018|ref|XP_003457485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Oreochromis niloticus]
Length = 2599
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 263/530 (49%), Gaps = 95/530 (17%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q EGV +L + N+ IL D+MGLGKTIQ+IA L+ V+
Sbjct: 926 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVYA--------------A 971
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG--------- 245
+G L+I P S I NWE EFS W+ N +YHG +R MI + C
Sbjct: 972 GVQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHGSLASRQMIQQYEMYCKDDKEHLIPG 1031
Query: 246 ---VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
+ LIT+F+ L E+ W VI+DEAHRLKN KL + L +++ LT
Sbjct: 1032 AYKFDALITTFEMVLSDCPELREIAWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLT 1091
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERKQH 361
GT +QN + EL++L ++ P + F R+F D LK +E+ Q
Sbjct: 1092 GTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGD--LK--------------TEEQVQK 1135
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ----LPEIQCLIN 417
L A+L+ +LRR KE+ +L K++ ++ ++D+QK+ YR +L+ + N
Sbjct: 1136 LQAILKPMMLRRLKEDVEKNL-APKQETIIEVELTDIQKKYYRAILERNFSFLSLGASSN 1194
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
++P + + +CC ++G + + +L+++ + L
Sbjct: 1195 SNVPNLLNTMMELRKCCNHPYLINGAEE-------KIVAELREVYDPL------------ 1235
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
PD L + ++S GK+ L+KL+ + G K+L+
Sbjct: 1236 -------------APDFHL------------QALIRSAGKLVLLDKLLPRLKAGGHKVLI 1270
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGL
Sbjct: 1271 FSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 1330
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
G+NL +A+ VIFD +WNP DLQAQ R R GQ + V V+RL++ S E
Sbjct: 1331 GINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1380
>gi|444730344|gb|ELW70731.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 1104
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 274/541 (50%), Gaps = 91/541 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 471 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 523
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 524 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 577
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 578 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 637
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 638 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 681
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 682 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 739
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 740 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 765
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 766 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 809
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 810 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 869
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 870 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 929
Query: 664 V 664
+
Sbjct: 930 I 930
>gi|356495839|ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
max]
Length = 894
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 290/574 (50%), Gaps = 60/574 (10%)
Query: 113 FEPLVL-------SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYK------NKHGGI 159
+PLVL + + I V + L HQREGV+F++ N HG I
Sbjct: 137 IDPLVLWHPQDSEDANANFTTITVDPLLVRYLRPHQREGVQFMFDCVSGLSTTPNIHGCI 196
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
L DDMGLGKT+Q+I L + + + K +I+ P+S++ NWE E
Sbjct: 197 LADDMGLGKTLQSITLLYTLLSQGFDGKPMVRK---------AIIVTPTSLVSNWEAEIK 247
Query: 220 RWSTFNVSIYH--GPNRDMILEKLE-----ACGVEVLITSFDSYRIHGSILSEVN-WEIV 271
+W V + R+ ++ ++ ++VLI S++++R+H S S + +++
Sbjct: 248 KWVGERVPLVALCESTREDVISGIDNFTSPKSNLQVLIVSYETFRMHSSKFSSTDSCDLL 307
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I DEAHRLKN+++ A L + RI L+GT +QN + E + + ++ PG LG HF
Sbjct: 308 ICDEAHRLKNDQTITNRALAALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDIAHF 367
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R +Y+ P+ G+ A ++ E+ L + +++LRRT HL K VV
Sbjct: 368 RRYYEAPIICGREPAATAEEKKLGAEQSAELSVNVNRFILRRTNALLSNHLP-PKIVEVV 426
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
C ++ LQ + + L IN PC P +QV KR + S +
Sbjct: 427 CCKLTPLQNKIIKTEL--------IN---PC----PQSQV---KRAITEELKQS----KI 464
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L + L+++ NH +LI R E F P+ ++ G + + + +
Sbjct: 465 LAYITALKKLCNHPKLIYDTIRSG-SPGTSGFEDCIRFFPPE--MLSGRSGSWTGGHGAW 521
Query: 512 VKSCGKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
V+ GKM L +L+ + D+I+L S + LD+ + + Y RLDGST +
Sbjct: 522 VELSGKMHVLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISK 581
Query: 571 RQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
RQ LV+ FN PSK VFL+S++AGG GLNL+ NR+V+FDP+WNPA D QA R +R
Sbjct: 582 RQKLVNCFND-PSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 640
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
GQK+ V ++R LSAG++EE VY RQ+ K+ L +
Sbjct: 641 GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKV 674
>gi|401422802|ref|XP_003875888.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1130
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 286/551 (51%), Gaps = 59/551 (10%)
Query: 133 INCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
I +L HQ GVKFL+ + HG IL D+MGLGKTIQT+A + + +
Sbjct: 431 IGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGH 490
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKL 241
T K L++ PSS+++NW EF +W F +S P D I+ +
Sbjct: 491 PTARK---------CLVVTPSSLVKNWCNEFDKWLGEGAVRHFAIS-ESTPKGDRIISRF 540
Query: 242 EACGVEVLITSFDSYRIHGSILSEV-NWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ G +VL+ S+D R + LS + + E+V+ DE HRLKN + K A L TRNR+
Sbjct: 541 DGDG-DVLVISYDQLRKYIDRLSGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRVI 599
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+GT +QN + E + + ++V PG LG R+ F ++EP+ G+ P+ + +R
Sbjct: 600 LSGTPIQNDLSEFHAMVNFVNPGILGNRDLFARVFEEPVSLGRDPECPDHLKSLGRDRAH 659
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE-IQCLINKD 419
+L + ++++LRRT+ +L K D VF + + Q+ AY++L + E +C
Sbjct: 660 YLSMLTQRFILRRTQSINESYLPP-KVDVTVFVRLGEKQELAYQKLADVVESAEC----- 713
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL-QQISNHL-----ELIKPNPR 473
+PL + ++L C + V L QI N + + +
Sbjct: 714 ------TPLVLISALRKL--------CNHMDLFHDAVHLSHQIGNSAGASAQQQQQQQQQ 759
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG-KMRALEKLMYSWASKG 532
+ ++R + A G + ++ + F S CG KM + ++ G
Sbjct: 760 QQAGRRRGRSSAAGESKGIPLSVL-----PKGFKPGSLNMDCGSKMHFVSLVLDELKRNG 814
Query: 533 --DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DK+++ S + LDI+ K ++ +LDGSTP RQ LVD FN S++ VFL+
Sbjct: 815 EHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGSQEVVFLL 874
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG+GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE +
Sbjct: 875 SSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGTIEEKI 934
Query: 650 YTRQVYKQQLS 660
Y RQV KQ LS
Sbjct: 935 YQRQVSKQGLS 945
>gi|342874224|gb|EGU76265.1| hypothetical protein FOXB_13234 [Fusarium oxysporum Fo5176]
Length = 1421
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 290/560 (51%), Gaps = 84/560 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + + +
Sbjct: 542 VGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQA------ 595
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF RW+ + + +Y GP R +K+ G +VL
Sbjct: 596 -------GPYLVIVPLSTLTNWNLEFERWAPSVSRIVYKGPPNARKQQQDKIRQGGFQVL 648
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 649 LTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSFTIQQYYHTRFRLILTGTPLQN 708
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + F E+++ P + GQ LT E+ + I + L
Sbjct: 709 NLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 763
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ + Y+ Q + + L S
Sbjct: 764 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQSKLYK--------QMVTHNRLVVS 814
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH
Sbjct: 815 DGK--GGKTGARGLSNM--------------IMQLRKLCNH------------------- 839
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYS 541
P + V N N I +D+ ++ GK L++++ + + G ++L+F
Sbjct: 840 --------PFVFDVVENVMNPLSIS-NDLLWRTAGKFELLDRILPKYQATGHRVLMFFQM 890
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
++DI+E +L K + + RLDG+T S+ R L+ +FN+ SK +FL+STRAGGLGLNL
Sbjct: 891 TAIMDIMEDYLRYKRFEYLRLDGTTKSDERSDLLREFNAPDSKYFMFLLSTRAGGLGLNL 950
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 951 QTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMD 1010
Query: 661 NIAV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1011 GKVIQAGRFDNKSSETDRDA 1030
>gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Mus
musculus]
Length = 1087
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 228 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 274
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 275 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 333
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 334 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 393
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 394 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 440
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 441 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 476
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 477 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 520
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 521 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 565
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 566 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 625
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 626 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 685
>gi|393911475|gb|EJD76323.1| associated with TFs and helicase family protein [Loa loa]
Length = 2724
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 273/541 (50%), Gaps = 92/541 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N RL E+Q EGV +L Y NK IL D+MGLGKT+QTI FL V+ D I
Sbjct: 1071 NNRLREYQFEGVNWLLYCYYNKQNCILADEMGLGKTVQTICFLQRVY------DYGI--- 1121
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG-PNRDMILEKLEAC-------- 244
G LI+ P S I NW+ EF W+ N +YHG + I+++ E C
Sbjct: 1122 -----HGPFLIVVPLSTIHNWQREFETWTDMNTIVYHGSASSRQIIQQTEFCYRPEELKG 1176
Query: 245 ------GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK-LYMACLELKTRN 297
+ LIT+F+ IL ++++++ I+DEAHRLKN K L L L +
Sbjct: 1177 GKRNIVKFDALITTFEMVVSDCDILKQISYQVCIIDEAHRLKNRNCKLLTSGLLSLTVEH 1236
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTGT +QN I ELY+L +++ P + F E + GQ T ++
Sbjct: 1237 RVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQF------GQCQT---------ED 1281
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ Q L +L+ +LRR KE+ + + KE+ ++ +S+ QK+ YR +L+
Sbjct: 1282 QVQRLQDILKPMMLRRLKED-VEKTLQPKEETIIEIQLSNTQKKYYRAILE--------- 1331
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ +L C ++ +++L++ NH LI
Sbjct: 1332 -----------------RNFSHL--CKGTSVPSLMNAMMELRKCCNHPFLI--------- 1363
Query: 478 KQRKDAELASAVFG-PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
++ LA G PD + + V+S GK+ + KL+ + G K+L
Sbjct: 1364 SGAEEQILAEVKTGHPDWS-------EDDVYQYALVQSSGKLVLIAKLLPKLHTDGHKVL 1416
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS VR+LDI+E+FLI + Y+F R+DG+ +LRQS +D F+ S + +FL+ TRAGG
Sbjct: 1417 IFSQMVRVLDIIEEFLIAQNYTFERIDGNVRGDLRQSAIDRFSKKDSDRFIFLLCTRAGG 1476
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL +A+ V+IFD +WNP DLQAQ R R GQ + V V+RL++ + E ++ +
Sbjct: 1477 LGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASL 1536
Query: 656 K 656
K
Sbjct: 1537 K 1537
>gi|171686770|ref|XP_001908326.1| hypothetical protein [Podospora anserina S mat+]
gi|170943346|emb|CAP68999.1| unnamed protein product [Podospora anserina S mat+]
Length = 1395
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 292/558 (52%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K +
Sbjct: 560 VGGKLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKHQN------ 613
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R + EK+ +VL
Sbjct: 614 -------GPYLVIVPLSTLTNWNLEFDKWAPSVSKIVYKGPPNTRKLQQEKIRRGEFQVL 666
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 667 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYSTRFRLILTGTPLQN 726
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + + F ++++ P + GQ LT E+ + I + L
Sbjct: 727 NLAELWAMLNFVLPNIFKSAKTFDDWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 781
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ R Y++++ +I L++
Sbjct: 782 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQARLYKQMVTHQKI--LVSDGKGGK 838
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH P DE + Q
Sbjct: 839 TG--------ARGLSNM--------------IMQLRKLCNH-----PFVFDEVENQMNPM 871
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+++ DL+ ++ GK L++++ + + G ++L+F
Sbjct: 872 SVSN-------DLLW--------------RTAGKFELLDRILPKYKATGHRVLMFFQMTA 910
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E FL +G + RLDG+T S R L+ DFN S +FL+STRAGGLGLNL +
Sbjct: 911 IMDIMEDFLRFRGIQYLRLDGTTKSEDRSDLLRDFNRPDSPYFMFLLSTRAGGLGLNLQT 970
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 971 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGK 1030
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1031 VIQAGRFDNKSSETDRDA 1048
>gi|389742023|gb|EIM83210.1| hypothetical protein STEHIDRAFT_101315 [Stereum hirsutum FP-91666
SS1]
Length = 1095
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 286/563 (50%), Gaps = 91/563 (16%)
Query: 114 EPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
E V D Y + P+ I+ + +Q +G+ ++ L+ N GIL D+MGLGKT+QTI
Sbjct: 167 EMAVDGNDQPYVFEESPSFISGTMRSYQVQGLNWMVSLHHNGLNGILADEMGLGKTLQTI 226
Query: 174 AFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIY 229
+FLA + ++ + G LI+ P S +QNW EFS+W ST +S
Sbjct: 227 SFLAYL-------------KHQTNTPGPHLIVVPKSTLQNWAREFSQWTPDVSTVVLSGS 273
Query: 230 HGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
++I +L +V ITS++ I S L + ++E +++DEAHR+KN S L
Sbjct: 274 KEERAELIATRLITQDFDVCITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQI 333
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD-EPLKHGQRLTAP 348
+R R+ +TGT +QN + EL+ L +++ P E F ++ D E H
Sbjct: 334 VRSFISRGRLLITGTPLQNNLKELFALLNFICP------EIFSDYGDLESFLHKDEEAGD 387
Query: 349 ERFIRIADERK-----QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY 403
ADE K + L +LR +LLRR K + +L+ KE N ++ +SD+Q++ Y
Sbjct: 388 ------ADEEKSKKVVEALHMILRPFLLRRVKSDVEKNLLPKKEIN-IYVGLSDMQRKWY 440
Query: 404 RRLLQLPEIQCLINKDLPCSCGSPLT-QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
R +L+ KD+ G LT + E RL N+ +++L++++
Sbjct: 441 RSVLE---------KDIDAVNG--LTGKKEGKTRLMNM--------------VMQLRKVT 475
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
H L D + D L V++CGKM L+
Sbjct: 476 CHPYLF-------------DGAEPGPPYTTDEHL---------------VQNCGKMVILD 507
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
KL+ S KG ++L+FS RMLDI+E + + + Y + R+DGST R +D++N
Sbjct: 508 KLLKSMKEKGSRVLIFSQMSRMLDIMEDYCLFRQYKYCRIDGSTAHEDRIVAIDEYNKPG 567
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
S++ +FL++TRAGGLG+NL SA+ VV++D +WNP DLQA DR+ R GQ + V VFR ++
Sbjct: 568 SEKFIFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFIT 627
Query: 642 AGSLEELVYTRQVYKQQLSNIAV 664
S+EE + R K +L + +
Sbjct: 628 EESVEERMLERAAQKLRLDQLVI 650
>gi|388854041|emb|CCF52385.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 865
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 301/591 (50%), Gaps = 78/591 (13%)
Query: 109 HTGPFEPLVLSKDGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGI 159
H E L L+K + +VP I+ RL + HQ EGVKFLY+ + +N +G I
Sbjct: 249 HKSLAEILGLNKAKSKEVEKVPVVIDPRLGKVLRPHQVEGVKFLYRCTTGLIVENAYGCI 308
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
+ D+MGLGKT+Q I + + + S I + +DK +I+CPSS+++NW E
Sbjct: 309 MADEMGLGKTLQCITLMWTLLKQ-----SPIAGKSTIDK---CIIVCPSSLVRNWANELI 360
Query: 220 RW----STFNVSIYHGPNRDMILEKLE--------ACGVEVLITSFDSYRIHGSILSEVN 267
+W + N+++ ++D ++E A V+I S+++ R L
Sbjct: 361 KWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGRAITQPVMIVSYETLRNLQEELGNTE 420
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
+++ DE HRLKN S + A ++K R R+ L+GT +QN + E + L ++ P LG+
Sbjct: 421 VGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQNDLSEYFALLNFANPELLGS 480
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
R FR+ ++ + G+ A E+ + A+E+ L A++ ++++RRT + +L + K
Sbjct: 481 RIDFRKNFEIAILKGRDSEATEKQQQEANEKLAQLSALVSRFIIRRTNDLLSKYLPV-KY 539
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
++VVFC M+ Q YR ++ PEI+ L L G S P
Sbjct: 540 EHVVFCKMAPFQLDLYRLFIRSPEIKKL------------------------LRGTGSQP 575
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L + L+++ NH +L S + P+ G ++ +
Sbjct: 576 ----LKAIGILKKLCNHPDL----------LDLPSDLDGSEQYFPE----GYTPRDRRHV 617
Query: 508 GLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGST 566
+ + GKM L++ + + A+ DKI+L S + LD+ E+ + RLDG+
Sbjct: 618 ---NPELSGKMMVLQRFLETIRATTNDKIVLISNYTQTLDVFERMCQANRWGMFRLDGTM 674
Query: 567 PSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRS 625
N RQ LVD FN K+ +FL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R
Sbjct: 675 TINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARV 734
Query: 626 FRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS-GKLEKRYFEG 675
+R GQK+ V+R ++ GS+EE + RQ +KQ LS+ V + R+F G
Sbjct: 735 WRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSG 785
>gi|354546892|emb|CCE43624.1| hypothetical protein CPAR2_212680 [Candida parapsilosis]
Length = 1022
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/551 (31%), Positives = 280/551 (50%), Gaps = 94/551 (17%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
+ + P +N L +Q +G+ +L LY+N GIL D+MGLGKT+QTI+FL +
Sbjct: 119 FEFTESPGYVNGELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQTISFLGYL---- 174
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN---RDMILE 239
+ K N G L+I P S + NW EF RW NV + G DMI
Sbjct: 175 ----RFMYKIN-----GPHLVIAPKSTLDNWYREFQRWIPDINVLVLQGDKDERSDMIKN 225
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ C +V++ S++ + + +WE +++DEAHR+KNE+S L ++NR+
Sbjct: 226 RVMTCDFDVIVASYEIVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRL 285
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY--DEPLKHGQRLTAPERFIRIADE 357
+TGT +QN + EL+ L +++ P + F E++ DE + G+ ++
Sbjct: 286 LITGTPLQNNLRELWALLNFILPDVFADTDSFDEWFQKDETSEDGEVIS----------- 334
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L VL+ +LLRR K + L+ KE N ++ M+ +QK Y+++L+
Sbjct: 335 ---QLHKVLKPFLLRRIKADVEKSLLPKKELN-IYTKMTPMQKNLYQKILE--------- 381
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL---IKPNPRD 474
KD+ G+ + E RL N+ +++L++ NH L ++P P
Sbjct: 382 KDIDAVNGA--NKKESKTRLLNI--------------VMQLRKCCNHPYLFDGVEPGP-- 423
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
+ D LV NAQ KM L+KL+ + ++G +
Sbjct: 424 --------------PYTTDEHLV-YNAQ--------------KMIILDKLLKKFKTEGSR 454
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
+L+FS RMLDILE + + + + R+DG T R + +D++N S++ VFL++TRA
Sbjct: 455 VLIFSQMSRMLDILEDYCYFREFPYCRIDGQTEHADRINAIDEYNKPGSEKFVFLLTTRA 514
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 515 GGLGINLTTADVVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERA 574
Query: 654 VYKQQLSNIAV 664
K +L + +
Sbjct: 575 TQKLRLDQLVI 585
>gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus]
gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=DNA-dependent ATPase SNF2L; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]
Length = 1046
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 233
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 234 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 292
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 293 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 352
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 353 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 399
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 400 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 435
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 436 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 479
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 480 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
>gi|366990683|ref|XP_003675109.1| hypothetical protein NCAS_0B06540 [Naumovozyma castellii CBS 4309]
gi|342300973|emb|CCC68738.1| hypothetical protein NCAS_0B06540 [Naumovozyma castellii CBS 4309]
Length = 1342
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 286/544 (52%), Gaps = 74/544 (13%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + +F +E D
Sbjct: 461 LKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLF--EEKKDP-------- 510
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PN-RDMILEKLEACGVEVLITSF 253
G L+I P S I NW +EF +W+ + N IY G PN R + ++ +VL+T++
Sbjct: 511 ---GPYLVIVPLSTITNWTLEFEKWAPSLNTVIYKGTPNQRRNLQHQVRIGNFDVLLTTY 567
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQNKIME 312
+ ++L++ W +I+DE HR+KN +SKL Y KTR+R+ LTGT +QN + E
Sbjct: 568 EYIIKDRALLAKHEWTHMIIDEGHRMKNAQSKLSYTITHYYKTRHRLILTGTPLQNNLPE 627
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKH---GQRLTAPERFIRIADERKQHLVAVLRKY 369
L+ L ++V P + + F ++++ P + G++L E + R L VLR +
Sbjct: 628 LWALLNFVLPKIFNSAKTFEDWFNTPFANTGTGEKLELTEEETLLVIRR---LHKVLRPF 684
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LLRR K+E + + K + VV C +S LQ++ Y ++L+ + L G+
Sbjct: 685 LLRRLKKE-VEKDLPDKVEKVVKCKLSGLQQQLYEQMLK--------HNALFLGEGTEGA 735
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
K L+N +++L++I NH P DE V
Sbjct: 736 TKSGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VEGV 766
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
P N + + + GK L +++ + + G ++L+F +++DI+E
Sbjct: 767 INP-------TRANSNLL----YRVSGKFELLNRVLPKFKAAGHRVLMFFQMTQVMDIME 815
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVI 608
FL K + RLDGST ++ R +++DFN+ S FL+STRAGGLGLNL +A+ V+I
Sbjct: 816 DFLRMKDLKYMRLDGSTKADDRTGMLNDFNAPDSDYFCFLLSTRAGGLGLNLQTADTVII 875
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGK 667
FD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + + +GK
Sbjct: 876 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 935
Query: 668 LEKR 671
+ +
Sbjct: 936 FDNK 939
>gi|367012103|ref|XP_003680552.1| hypothetical protein TDEL_0C04520 [Torulaspora delbrueckii]
gi|359748211|emb|CCE91341.1| hypothetical protein TDEL_0C04520 [Torulaspora delbrueckii]
Length = 1313
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 282/546 (51%), Gaps = 70/546 (12%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
I L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + ++
Sbjct: 451 IGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLY------------ 498
Query: 193 DNKVDKK-GYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PNRDMILE-KLEACGVEV 248
+V K+ G L+I P S I NW +EF +W+ + N IY G PN+ L+ ++ + +V
Sbjct: 499 --EVKKEPGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRRSLQFQVRSGNFDV 556
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQ 307
L+T+++ S+L++ +W +I+DE HR+KN +SKL Y TRNR+ LTGT +Q
Sbjct: 557 LLTTYEYIIKDRSVLAKPDWAHMIIDEGHRMKNAQSKLSYTITHYYHTRNRLILTGTPLQ 616
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ L ++V P + + F ++++ P + E + L VLR
Sbjct: 617 NNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLR 676
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+LLRR K+E + + K + V+ C +S LQ + Y ++L+ + L G+
Sbjct: 677 PFLLRRLKKE-VEKDLPDKVEKVIKCKLSGLQHQLYEQMLK--------HNALFVGAGTE 727
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
K L+N +++L++I NH P DE
Sbjct: 728 GATKGGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VE 758
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
V P +N + + GK L++++ + + G ++L+F +++DI
Sbjct: 759 GVINP-------TRENSPLL----YRVAGKFELLDRVLPKFRATGHRVLMFFQMTQVMDI 807
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRV 606
+E FL KG + RLDG T + R ++ DFN+ S FL+STRAGGLGLNL +A+ V
Sbjct: 808 MEDFLRMKGLKYMRLDGGTKTEDRTDMLKDFNAPNSDYFCFLLSTRAGGLGLNLQTADTV 867
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-S 665
+IFD +WNP QDLQAQDR+ R GQK V + RL++ ++EE++ R K + + +
Sbjct: 868 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDTVEEVILERATQKLDIDGKVIQA 927
Query: 666 GKLEKR 671
GK + +
Sbjct: 928 GKFDNK 933
>gi|367030403|ref|XP_003664485.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
gi|347011755|gb|AEO59240.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
Length = 1125
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 295/596 (49%), Gaps = 98/596 (16%)
Query: 85 DEEKEKEQEQEKFGRHQLG-----QFQFDHTGPFEPLVLSKDG---EYPIIQVPASINCR 136
D + E+E Q K G Q G + + + E L KDG E + P I
Sbjct: 126 DRQNEEEARQRKRGGRQGGATSERRRRTEAEEDAELLKDEKDGGSAETVFRESPPFIQGT 185
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
+ ++Q G+ +L L++N GIL D+MGLGKT+QTIAFL + + +
Sbjct: 186 MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYL-------------RHIM 232
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACGVEVLITS 252
G L+ P S + NW+ EF +W+ NV + G + +I ++L +V ITS
Sbjct: 233 GITGPHLVTVPKSTLDNWKREFEKWTPEVNVLVLQGAKEERHQLINDRLVDENFDVCITS 292
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ + L + WE +I+DEAHR+KNE+S L +RNR+ +TGT +QN + E
Sbjct: 293 YEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTPLQNNLHE 352
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L+ L +++ P G E F +++ GQ R D Q L VLR +LLR
Sbjct: 353 LWALLNFLLPDVFGDSEAFDQWF-----SGQD--------RDQDTVVQQLHRVLRPFLLR 399
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K + L+ KE N V+ MS++Q + Y+++L+ KD+ G+ + E
Sbjct: 400 RVKSDVEKSLLPKKEIN-VYIGMSEMQVKWYQKILE---------KDIDAVNGAG-GKRE 448
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAELASAV 489
RL N+ +++L++ NH E +P P D+
Sbjct: 449 SKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL--------- 485
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILE 549
+ + GKM L+KL+ +G ++L+FS R+LDILE
Sbjct: 486 ----------------------IYNAGKMVVLDKLLKRIQKQGSRVLIFSQMSRLLDILE 523
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLVSANRVVI 608
+ + +GY + R+DGST R + +D++N S K +FL++TRAGGLG+NL +A+ V++
Sbjct: 524 DYCVFRGYKYCRIDGSTAHEDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTTADIVIL 583
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L + +
Sbjct: 584 YDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVI 639
>gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus]
Length = 1032
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 233
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 234 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 292
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 293 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 352
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 353 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 399
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 400 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 435
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 436 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 479
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 480 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
>gi|358339518|dbj|GAA29438.2| DNA excision repair protein ERCC-6-like, partial [Clonorchis
sinensis]
Length = 1661
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 300/631 (47%), Gaps = 129/631 (20%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+++P ++ +L E+Q++GVK+L+ L+ GGIL DDMGLGKT+Q IAFL+ +F
Sbjct: 530 LRLPRALYEKLYEYQKDGVKWLWDLHTRAPGGILADDMGLGKTVQVIAFLSGLFISSS-- 587
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRDMILEKLE--- 242
K+ LI+ P SV+ WE E RW+ V ++H NR L L
Sbjct: 588 -----------KRLTALILMPVSVLVTWEAELKRWAPALRVVVFHDGNRSQRLRSLSMIQ 636
Query: 243 -------------ACGVEVLITSFDS---------YRIHGSILSEVNWEIVIVDEAHRLK 280
A G E LI F + + G + E W+ +I+DEAH++K
Sbjct: 637 RNGGIVLTTYGMVAAGAEDLIVDFHANPQFMSAKLSNLEGRMAPEFVWDYLILDEAHKIK 696
Query: 281 NEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPL 339
N +K A L + +R+ LTGT +QN ++EL++L++ G LG + F+ Y++P+
Sbjct: 697 NPSAKTTKAVLSIAAEHRVLLTGTAVQNNLLELWSLYNCTHSGRLLGRMQTFKNEYEKPI 756
Query: 340 KHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET-----------------IGHL 382
K + A Q L ++ Y LRRTKEE IG +
Sbjct: 757 KRAREKDASRAERAHGQLMAQSLRRIIDPYFLRRTKEEILPSGVDKKASVSPADPDIGLV 816
Query: 383 -----MMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRL 437
M K + V++ + ++Q+R+YR L+L +++ L+ + + SPL ++ K+L
Sbjct: 817 TPVEPMPKKTELVLWIYLREVQERSYRDFLELDQVKELL---IGTTRRSPLMELLILKKL 873
Query: 438 DNLDGCDSCPFCLVLPCLVKLQQISN-HLELIKPNPRDEPDKQRKDAELASAVFGPDIDL 496
CD P L+ Q ++ +LE+ PD++ L A
Sbjct: 874 -----CDH-------PRLLSPHQCASLNLEVTS-----VPDERYSKHSLPPAS------- 909
Query: 497 VGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-------ASKGDKILLFSYSVRMLDILE 549
V+ GK+ L LM S+ + K L+FS S+R LD+ E
Sbjct: 910 -------------QLVQESGKLTFLSLLMSSFLREKQPGSGTVPKTLIFSQSIRFLDMAE 956
Query: 550 KFLIR-----------KGYSFSRLDGS-TPSNLRQSLVDDFNSSPSKQVFLISTRAGGLG 597
K ++ +G+ RLDG T R ++ F PS V L++T+ GG+G
Sbjct: 957 KVILSINNRPETTSQFRGHRVLRLDGRLTKVEERLDVIRLFERDPSYTVMLLTTQVGGVG 1016
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
L L +A+RV+I DP+WNPA D QA DR++R GQK VIV+RLL+ G++EE +Y RQ++K
Sbjct: 1017 LTLTAASRVIILDPSWNPATDAQAVDRAYRIGQKSDVIVYRLLTCGTVEEKIYRRQIFKN 1076
Query: 658 QLSNIAVSGKLEK------RYFEGVQDCKEF 682
+ + K RYF QD +E
Sbjct: 1077 SVIRQTTTTGQNKADQDPYRYFTN-QDLREL 1106
>gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus]
Length = 1064
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 188 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 234
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 235 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 293
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 294 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 353
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 354 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 400
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 401 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 436
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 437 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 480
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 481 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 525
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 526 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 585
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 586 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 645
>gi|449281262|gb|EMC88383.1| Chromodomain-helicase-DNA-binding protein 2 [Columba livia]
Length = 1719
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 293/587 (49%), Gaps = 102/587 (17%)
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
S N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 476 GSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY---- 531
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KL 241
G L++ P S + +W+ EF W+ NV +Y G +R+MI E +
Sbjct: 532 ---------GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQS 582
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +
Sbjct: 583 KRLKFNALITTYEILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLI 642
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL++L ++ P E F E + + ++G Q
Sbjct: 643 TGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QS 686
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 687 LHKVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWIL-------------- 731
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
K L + F L +++L++ NH LIKP P++ +
Sbjct: 732 ---------TRNYKALSKGTRGSTSGF---LNIVMELKKCCNHCYLIKP-----PEENER 774
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ L E+ L ++S GK+ L+KL+ +G+++L+FS
Sbjct: 775 ENGL------------------ETLQSL--IRSSGKLILLDKLLTRLRDRGNRVLIFSQM 814
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNL 600
VRMLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL
Sbjct: 815 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 874
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SA+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L
Sbjct: 875 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 934
Query: 661 NIAV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
++ + +G+ G + F E FG +LF++L
Sbjct: 935 HLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 981
>gi|409082253|gb|EKM82611.1| hypothetical protein AGABI1DRAFT_118061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 820
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 296/570 (51%), Gaps = 69/570 (12%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGV+FLYK + N++G I+ D+MGLGKT+Q IA +
Sbjct: 214 KVPVVIDPRLSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMWT 273
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + ++ +I+CPSS+++NW E +W + +++ + +
Sbjct: 274 LLKQSPHAGKPTIEK--------CIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGK 325
Query: 235 DMILEKLE----ACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+L KL+ A G V +I S+++ R + L+ +++ DE HRLKN ++
Sbjct: 326 AELLPKLQRWVSARGRNVTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQT 385
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L + R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ + G+
Sbjct: 386 FQALTSLDVKRRVILTGTPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDAL 445
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + ++++ + L +++ K+++RRT + +L + K ++VVFC +SD Q YR
Sbjct: 446 ASDENKAQSEKKLKELGSLVMKFIIRRTNDLLSKYLPV-KYEHVVFCHLSDFQLSLYRLF 504
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ P+I+ L+ + PL + K+L N P L LP +K +
Sbjct: 505 ITSPDIKALLRG----TESQPLKAINLLKKLCN------HPDLLDLPSELKGSE-----N 549
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ P+ + + AV S G GK LE+ ++
Sbjct: 550 LLPPDYTGTKGGGGRGGDRNPAV--------------RSEWG-------GKFIVLERFLH 588
Query: 527 SW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
A DKI+L S + LD+ E+ K Y F RLDG N RQ LVD FN K+
Sbjct: 589 RIRAESNDKIVLISNYTQTLDLFERLCRNKKYGFFRLDGKMTINKRQKLVDQFNDPNGKE 648
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G+
Sbjct: 649 FIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGT 708
Query: 645 LEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
+EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 709 IEEKIFQRQANKQALSSAVVDEKEDTERHF 738
>gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
Length = 1061
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 280/543 (51%), Gaps = 79/543 (14%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P +N +L +Q +G+ +L +LY+NK GIL D+MGLGKT+QTI+FL +
Sbjct: 144 PGYVNGKLRPYQIQGLNWLVQLYENKLSGILADEMGLGKTLQTISFLGYL---------R 194
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACG 245
LK G L++ P S + NW EF RW+ ++ ++D +I ++L C
Sbjct: 195 YLKG----INGPHLVVVPKSTLDNWAREFKRWTPEVKTVLLQGDKDQRTTIIQDELMTCN 250
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+VLI+S++ S L + NW+ +++DEAHR+KNE+S L +++R+ +TGT
Sbjct: 251 FDVLISSYEIVIREKSSLRKFNWDYIVIDEAHRIKNEESLLSQIIRMFHSKSRLLITGTP 310
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P + F +++ + E+ Q L V
Sbjct: 311 LQNNLHELWALLNFILPDIFSDSDTFDQWFGRGGDGDENDDKSEK--NDQGSVVQQLHKV 368
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
L+ +LLRR K + L+ KE N V+ MSD+Q++ Y+++L+ KD+
Sbjct: 369 LQPFLLRRIKSDVEKSLLPKKEVN-VYVGMSDMQRQWYQKILE---------KDIDAVVS 418
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
S + E RL N+ +++L++ NH E +P P
Sbjct: 419 SS-GKKESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGP---------- 453
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
F D LV NAQ KM+ L+KL+ +G ++L+FS
Sbjct: 454 ------PFTTDEHLV-FNAQ--------------KMKVLDKLLKRKKEQGSRVLIFSQMS 492
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
RMLDILE + + Y + R+DG T + R +DD+N S K VFL++TRAGGLG+NL
Sbjct: 493 RMLDILEDYCNFREYGYCRIDGQTDHSDRIDAIDDYNRKDSDKFVFLLTTRAGGLGINLT 552
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V+++D +WNP DLQA DR+ R GQ + V V+RL++ ++EE V R K +L
Sbjct: 553 SADTVILYDSDWNPQADLQAMDRAHRIGQTKQVYVYRLVTENAIEEKVLERAQQKLRLDQ 612
Query: 662 IAV 664
+ +
Sbjct: 613 LVI 615
>gi|115727572|ref|XP_788696.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 2
[Strongylocentrotus purpuratus]
gi|390338037|ref|XP_003724706.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Strongylocentrotus purpuratus]
Length = 1019
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 269/550 (48%), Gaps = 104/550 (18%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N + ++Q G+ +L LY++ GIL D+MGLGKT+QTI+ L +
Sbjct: 134 NGEMRDYQVRGLNWLISLYEHGINGILADEMGLGKTLQTISLLGYM-------------- 179
Query: 194 NKVDKKGYV------LIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEA 243
K Y LIICP S + NW E RW ++ N+D I + +
Sbjct: 180 -----KHYRHIPSPHLIICPKSTLANWMAECERWCPSLRAVCLIGNQDQRSAFIRDVMMP 234
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+V ITS++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTG
Sbjct: 235 GEWDVCITSYEMAIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 294
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + EL+ L +++ P + E F ++ Q + L
Sbjct: 295 TPLQNNLHELWALLNFLLPDVFNSSEDFDAWFS-----TQDCLGDNSLV-------TRLH 342
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
AVLR +LLRR K E + ++ K++ ++ MS +Q+ Y ++L
Sbjct: 343 AVLRPFLLRRLKSE-VEKALLPKKETKMYVGMSIMQREWYTKILM--------------- 386
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPDKQR 480
K +D ++G ++ L+ L++ NH L +P P DK
Sbjct: 387 -----------KDIDVVNGAGKSDKMRLMNILMHLRKCGNHPYLFDGAEPGPPYTTDKHL 435
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
V++ GKM L+KL+ +G ++L+FS
Sbjct: 436 -------------------------------VENSGKMSVLDKLLPKLKEQGSRVLIFSQ 464
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
R+LDILE + + +G+++ RLDG TP RQ +++FN S++ VFL+STRAGGLG+N
Sbjct: 465 MTRLLDILEDYCVWRGHNYCRLDGQTPHAERQESINNFNMPDSEKFVFLLSTRAGGLGIN 524
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L +A+ VV++D +WNP DLQA DR+ R GQK+ V VFR +S ++EE + R K +L
Sbjct: 525 LATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKQVHVFRFISENTVEERIVERAEMKLRL 584
Query: 660 SNIAV-SGKL 668
NI + G+L
Sbjct: 585 DNIVIQQGRL 594
>gi|451845347|gb|EMD58660.1| hypothetical protein COCSADRAFT_264941 [Cochliobolus sativus
ND90Pr]
Length = 889
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 275/548 (50%), Gaps = 64/548 (11%)
Query: 137 LLEHQREGVKFLYKLYKN----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L +HQREGV+FLY+ G I+ D+MGLGKT+QTI L + ++ DS L
Sbjct: 250 LRDHQREGVQFLYECVMGMRCEGEGAIMADEMGLGKTLQTITLLWTLMKQNPIHDSPPLI 309
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMILEKLEACGVEVL 249
LI+CP+ ++ NW+ EF +W V + N+ I ++
Sbjct: 310 KK-------ALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNKK-IANFTMGKSYNIM 361
Query: 250 ITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
I ++ RI L + +IVI DE HRLK +K +A L T RI L+GT +QN
Sbjct: 362 IVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTASNKAMLAIQSLNTERRIILSGTPLQN 421
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ E Y D+V PG LG R F+ ++ P+ ++ A E + + R + LV++ +
Sbjct: 422 DLGEFYTAIDFVNPGLLGQRSAFKRSFELPIMRSRQPDASEAELEKGEARWKELVSLTSQ 481
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+++RRT E + + K +++VFC + Q YR +L GSP
Sbjct: 482 FMIRRT-AEVLSKYLPPKTEHIVFCRPTKGQAETYRAIL-----------------GSPT 523
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
++ L + D + L + L+++ N L+K D +E+ +
Sbjct: 524 FRLA----LGSTD--------IALQLINVLKKVCNSPSLLK----SSKDNDDTPSEMLQS 567
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS-WASKGDKILLFSYSVRMLDI 547
+ I L+ + S S K+R L+ L++S + + +KI++ S LD+
Sbjct: 568 I----IPLIPSKILSSS-------ASSAKLRLLDSLIHSIYTTTEEKIVIVSNYTTTLDM 616
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANR 605
+E+ L+ Y+F RLDGSTP++ RQSLV+ FN +P FL+S ++GG+GLNL+ A+R
Sbjct: 617 IERLLVSLSYTFLRLDGSTPASKRQSLVEKFNKTPKTTSFAFLLSAKSGGVGLNLIGASR 676
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVS 665
+V+FD +WNPA DLQA R R GQK V+R L G L+E +Y RQV K L+N V
Sbjct: 677 IVLFDIDWNPATDLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQVMKMGLANAVVD 736
Query: 666 GKLEKRYF 673
K F
Sbjct: 737 NKASASSF 744
>gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like,
partial [Ailuropoda melanoleuca]
Length = 1114
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 284/576 (49%), Gaps = 99/576 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRDMILEKLEACGVEVLITS 252
G LI+ P S + +W+ EF W+ N+ Y + I + + LIT+
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINIREY-----EWIHSQTKRLKFNALITT 582
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT +QN + E
Sbjct: 583 YEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKE 642
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L++L ++ P E F E + + ++G Q L VL +LLR
Sbjct: 643 LWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHKVLEPFLLR 686
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K++ + + K + ++ MS LQK+ Y+ +L + L + G
Sbjct: 687 RVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTSG------- 737
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGP 492
L +++L++ NH LIKP +E
Sbjct: 738 ------------------FLNIVMELKKCCNHCYLIKPPEENE----------------- 762
Query: 493 DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL 552
+N + LS ++S GK+ L+KL+ +G+++L+FS VRMLDIL ++L
Sbjct: 763 --------RENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 814
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVVIFDP 611
K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA+ VVIFD
Sbjct: 815 TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS 874
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-----SG 666
+WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++ + +G
Sbjct: 875 DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG 934
Query: 667 KLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ G + F E FG +LF++L
Sbjct: 935 RTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 970
>gi|449675767|ref|XP_002170465.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Hydra magnipapillata]
Length = 716
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 180/587 (30%), Positives = 297/587 (50%), Gaps = 76/587 (12%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V + L HQREGVKFLY K+ G I+ D+MGLGKT+Q I L +
Sbjct: 114 VVVDPQLTSVLRPHQREGVKFLYDCVVGNRIKDNFGCIMADEMGLGKTLQCITVLWTLLR 173
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMIL 238
+ S I K +I+ P+S+++NW+ E +W ++I G ++ I
Sbjct: 174 QSPSGKPEINK---------AIIVAPASLVKNWDKEIEKWLKGRVHTLAIDSG-SKSEID 223
Query: 239 EKLEA--------CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
+KL + +LI S++++R+H +L +VI DE HRLKN +++ Y A
Sbjct: 224 DKLSSFMSQQQVRAPTPILIISYETFRLHTDVLHRSPVGLVICDEGHRLKNLENQTYQAL 283
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
LKT+ RI L+GT +QN ++E ++L +V G LGT FR ++ P+ G+ E
Sbjct: 284 NLLKTKKRILLSGTPIQNDLLEYFSLVHFVNGGMLGTVSEFRRKFEAPILRGRDGAGSES 343
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+I +E+ L++++ K ++RRT + + K + +V C ++ LQ + Y+ +
Sbjct: 344 DQKIGEEKLAELLSIVSKCIIRRT-SAILSKYLPVKTEQIVMCKLTTLQSKLYKAFVNSK 402
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
+ + D + S L + ++++ NH ELI
Sbjct: 403 VARMQLQADAKLNASS-------------------------LAFINLIKKLCNHPELIY- 436
Query: 471 NPRDEPDKQRKDAELASAV---FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE-KLMY 526
DKQ+ + V F P+ + + + SD+ GKM+ L+ L
Sbjct: 437 ------DKQKLCEDNLQEVLNEFPPNFN---------TKVFASDLS--GKMQVLDFILAL 479
Query: 527 SWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ- 585
++ DK++L S + +D+ EK +GY + RLDGS R +VD FN S
Sbjct: 480 VKSTSNDKVVLVSNYTQTIDLFEKLSRLRGYQYVRLDGSMSIKKRMKVVDRFNDPNSNDF 539
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+F++S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V ++RLLS G++
Sbjct: 540 LFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKEVFIYRLLSTGTI 599
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKE-FQGELFGICN 691
EE + RQ +K+ LS+ V +++ + + KE F+ + IC+
Sbjct: 600 EEKILQRQTHKKALSSCVVDEEVDVERHFSLNELKELFKYDSETICD 646
>gi|410987472|ref|XP_004000025.1| PREDICTED: DNA repair and recombination protein RAD54B [Felis
catus]
Length = 911
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 279/538 (51%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 296 HLRPHQKEGILFLYECVMGMRVSGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 355
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW EF +W + + I+ + E +++ VL
Sbjct: 356 IKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFIKSPFYSVL 407
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + V ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 408 IISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQND 467
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ ++ +A E + ++R L + +
Sbjct: 468 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRQPSASEEEKELGEKRAAELTCLTGLF 527
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L SP
Sbjct: 528 ILRRT-QEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLG---DSP-- 581
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
+ C L L C+ PCL + N ++ + + + +++R E V
Sbjct: 582 HLICIGALKKL--CNH-------PCL-----LFNSIKGRECSSTWDENEERSLYEGLVNV 627
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
F D + + + + GK++ L KL+ +K++L S + L+I
Sbjct: 628 FPADYNPL-----------MFTEEESGKLQVLLKLLAVIRELRPTEKVVLVSNYTQTLNI 676
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+F+RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 677 LQEVCRRHGYAFTRLDGQTPVSQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHL 736
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 737 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVV 794
>gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus]
gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus]
Length = 1024
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 267/536 (49%), Gaps = 86/536 (16%)
Query: 139 EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDK 198
++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L + N +
Sbjct: 134 DYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYL-------------KNFRNN 180
Query: 199 KGYVLIICPSSVIQNWEIEFSRW--STFNVS-IYHGPNRDMILEKLEACG-VEVLITSFD 254
G ++I P S +QNW EF RW S V I R+ + + G +V ITS++
Sbjct: 181 PGPHIVIVPKSTLQNWVNEFGRWCPSLRAVCLIGDQETRNAFIRDVLMPGEWDVCITSYE 240
Query: 255 SYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELY 314
++ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + EL+
Sbjct: 241 MCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHELW 300
Query: 315 NLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRT 374
L +++ P + E F ++D I Q L VL+ +LLRR
Sbjct: 301 ALLNFLLPDIFNSAEDFDSWFD-----ANECIGDNTLI-------QRLHEVLKPFLLRRL 348
Query: 375 KEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECC 434
K E L+ KE + F +S +Q+ Y ++L
Sbjct: 349 KSEVEKRLLPKKEVKI-FVGLSKMQREWYTKIL--------------------------M 381
Query: 435 KRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDI 494
K +D ++G + L++L++ +NH L D + D
Sbjct: 382 KDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLF-------------DGAEPGPPYTTDW 428
Query: 495 DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR 554
LV ++ GKM LEKL+ +G ++L+FS RMLDILE +
Sbjct: 429 HLV---------------ENSGKMIILEKLLNKLQEQGSRVLIFSQMTRMLDILEDYCHW 473
Query: 555 KGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNW 613
+GY++ RLDG TP R ++D++N+ S++ +F++STRAGGLG+NL +A+ V+I+D +W
Sbjct: 474 RGYNYCRLDGQTPHEDRTKMIDEYNAEGSQKFIFMLSTRAGGLGINLATADVVIIYDSDW 533
Query: 614 NPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
NP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L + + G+L
Sbjct: 534 NPQMDLQAMDRAHRIGQKKQVRVFRLITENTIEEKIVERAEIKLKLDKLVIQQGRL 589
>gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis]
gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis]
Length = 897
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 279/556 (50%), Gaps = 63/556 (11%)
Query: 125 PIIQVPAS--INCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLA 177
PI+ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 267 PIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMGLGKTLQCISLIW 326
Query: 178 AVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM 236
+ + ++K LI+ P S+++NW EF +W T + ++
Sbjct: 327 TLIRQGPYGGKPVIKK--------ALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQDHK 378
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ E +++ VLI S++ + +++++VI DE HRLKN K A L
Sbjct: 379 VEEFMKSPLYSVLIISYEMLLRCLEQIQSLDFDVVICDEGHRLKNTSIKTTSALASLTCS 438
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RI L+GT +QN + E + L ++V P +LG+ +R+ ++EP+ + TA + +
Sbjct: 439 KRIILSGTPVQNDLQEFFALIEFVNPAALGSLSTYRKIFEEPIIRSREPTATTEEKNLGE 498
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ-CL 415
ER L + ++LRRT +E I + K +++VFC S Q YR+LL ++ CL
Sbjct: 499 ERAAELARLTGLFILRRT-QEVINKFLPPKIESIVFCRPSQFQLDLYRKLLNSRTVKSCL 557
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNP 472
L +S P L C+ L+++ NH L+
Sbjct: 558 ------------------------LGSGESSPH---LVCIGALKKLCNHPFLLFRTIQGK 590
Query: 473 RDEPDKQRKDA-ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--A 529
PD+ + E + VF D D G +ES GK+ L L+
Sbjct: 591 STNPDQDEHNLYESVAEVFPQDYD---GAKISES--------ESGKLLVLSNLLSRIREL 639
Query: 530 SKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFL 588
S ++++L S + L+IL+ + GYS +RLDG TP RQ +VD FNS S +FL
Sbjct: 640 SPSERVVLVSNYTQTLNILQDLCNQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSTDFIFL 699
Query: 589 ISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEEL 648
+S++AGG+GLNL+ A+ ++++D +WNPA D+QA R +R GQ+ V ++RLL+ GSLEE
Sbjct: 700 LSSKAGGVGLNLIGASHLILYDLDWNPANDIQAMARVWRDGQRHTVHIYRLLTTGSLEEK 759
Query: 649 VYTRQVYKQQLSNIAV 664
+Y RQ+ KQ LS V
Sbjct: 760 IYQRQISKQGLSGAVV 775
>gi|346327194|gb|EGX96790.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Cordyceps militaris CM01]
Length = 1418
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 304/594 (51%), Gaps = 101/594 (17%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + + +
Sbjct: 538 VGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQT------ 591
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + N +Y GP R EK+ +VL
Sbjct: 592 -------GPYLVIVPLSTLTNWNLEFEKWAPSINRIVYKGPPNTRKQHQEKIRQGRFQVL 644
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 645 LTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYNTRFRLILTGTPLQN 704
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + F E+++ P + GQ LT E+ + I + L
Sbjct: 705 NLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKIELTEEEQILVI-----RRLH 759
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ + Y++++ +I +
Sbjct: 760 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCQFSALQSKLYKQMVTHNKI----------A 808
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
+ L N+ +++L+++ NH
Sbjct: 809 VSDGKGGKAGARGLSNM--------------IMQLRKLCNH------------------- 835
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYS 541
VFG +++ N N I +D+ ++ GK L++++ + + G ++L+F
Sbjct: 836 ---PFVFG-EVE----NVMNPMSIS-NDILWRTAGKFELLDRVLPKYQATGHRVLMFFQM 886
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
++DI+E +L + + RLDG+T S+ R L+ +FN+ SK +FL+STRAGGLGLNL
Sbjct: 887 TAIMDIMEDYLRYRRMEYLRLDGTTKSDERSDLLHEFNAPDSKYFIFLLSTRAGGLGLNL 946
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 947 QTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMD 1006
Query: 661 NIAV-SGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIES--HEE 711
+ +G+ + + E +D + R L L T+E+ ES HEE
Sbjct: 1007 GKVIQAGRFDNKSSETDRDA------------MLRTL---LETAEMTESGEHEE 1045
>gi|432090998|gb|ELK24214.1| Chromodomain-helicase-DNA-binding protein 2 [Myotis davidii]
Length = 1889
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 288/581 (49%), Gaps = 102/581 (17%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 547 LRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY---------- 596
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGP--NRDMILE------KLEACGVE 247
G LI+ P S + +W+ EF W+ N+ +Y G +R+ I E + +
Sbjct: 597 ---GPFLIVVPLSTLTSWQREFEIWAPEINIVVYIGDLMSRNTIREYEWIHSQTKRLKFN 653
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT +Q
Sbjct: 654 ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 713
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++L ++ P E F E + + ++G Q L VL
Sbjct: 714 NSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHKVLE 757
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+LLRR K++ + + K + ++ MS LQK+ Y+ +L + L + G
Sbjct: 758 PFLLRRVKKD-VEKSLPAKVERILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTSG-- 813
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
L +++L++ NH LIKP +E
Sbjct: 814 -----------------------FLNIVMELKKCCNHCYLIKPPEENE------------ 838
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
+N I LS ++S GK+ L+KL+ +G+++L+FS VRMLDI
Sbjct: 839 -------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDI 885
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRV 606
L ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA+ V
Sbjct: 886 LAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTV 945
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-- 664
VIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++ +
Sbjct: 946 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQR 1005
Query: 665 ---SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+G+ G + F E FG +LF++L
Sbjct: 1006 MDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 1046
>gi|358373259|dbj|GAA89858.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Aspergillus kawachii IFO 4308]
Length = 1413
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 287/556 (51%), Gaps = 80/556 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +++
Sbjct: 529 VQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIERKKNN 588
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEA 243
G L+I P S + NW +EF +W+ + + +Y GP R +++
Sbjct: 589 -------------GPFLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRW 635
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLT 302
+VL+T+++ ILS++ W +IVDE HR+KN +SKL + T R R+ LT
Sbjct: 636 GNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 695
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADE 357
GT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ + I
Sbjct: 696 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI--- 752
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VLR +LLRR K++ + + K++ V+ C S LQ + YR Q + +
Sbjct: 753 --RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYR--------QLVTH 801
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ S G + L N+ L++L+++ NH
Sbjct: 802 NKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------- 832
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
VF P D + I ++ GK L++++ + + G ++L+
Sbjct: 833 ---------PFVFEPVEDQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLM 879
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGL
Sbjct: 880 FFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGL 939
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K
Sbjct: 940 GLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 999
Query: 657 QQLSNIAV-SGKLEKR 671
+ + +GK + +
Sbjct: 1000 LDMDGKVIQAGKFDNK 1015
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 289/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 168 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 214
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 215 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 274
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 275 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 334
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + + F ++D G Q+L + L AVL+ +LL
Sbjct: 335 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 381
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y R+L
Sbjct: 382 RRIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTRIL------------------------ 416
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 417 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 461
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D L+ + GKM L+KL+ +G ++LLFS R+LDILE +
Sbjct: 462 TDTHLITNS---------------GKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDY 506
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 507 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYD 566
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 567 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 626
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 627 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTEEDITTILERGEKK 672
>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
Length = 808
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 287/570 (50%), Gaps = 74/570 (12%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + +N +G I+ D+MGLGKT+Q I+ +
Sbjct: 202 KVPVVIDPRLSKILRPHQIEGVKFLYRCTTGMIDENANGCIMADEMGLGKTLQCISLMWT 261
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + + T ++ +I CPS++++NW E +W + I +
Sbjct: 262 LLKQSPEAGRTTVQK--------CVIACPSTLVRNWANELVKWLGPDAVTPFVIDGKATK 313
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+ +L+ + VLI S+++ R++ L + +++ DE HRLKN++S
Sbjct: 314 AELSSQLKQWAIASGRSIVRPVLIVSYETLRLNVEDLKDTPIGLLLCDEGHRLKNKESLT 373
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ L R+ L+GT +QN + E + L + P LG++ FR+ ++ P+ G+
Sbjct: 374 WKELNSLNVSRRVILSGTPIQNDLSEYFALVHFANPNLLGSQNEFRKKFEIPILRGRDAA 433
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + + DER L A++ K+++RRT + +L + K ++VVFC +S+ Q Y
Sbjct: 434 ASDEDRKKGDERLSELSAIVNKFIIRRTNDILSKYLPI-KYEHVVFCNLSEFQLNLYNHF 492
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L PEI+ L+ PL + K+L N P L+ L + E
Sbjct: 493 LSSPEIRSLLRG----KGSQPLKAIGLLKKLCN------------HPDLLDLARDLPGCE 536
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
P+ PD + +D ++ S GKM L++++
Sbjct: 537 QYFPDDYVPPDGRGRDRDIKSWY-------------------------SGKMMVLDRMLA 571
Query: 527 SW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
DKI+L S + LD+ EK + Y RLDG+ N RQ LVD FN ++
Sbjct: 572 RIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPNGEE 631
Query: 586 -VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGS 644
+FL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ GS
Sbjct: 632 FIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGS 691
Query: 645 LEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
+EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 692 IEEKIFQRQSHKQSLSSCVVDSAEDVERHF 721
>gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1058
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 325/660 (49%), Gaps = 81/660 (12%)
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G ++ +I L HQREG+++L+ L+ GGILGDDMGLGKT+Q +FLA +F
Sbjct: 352 GPKSTYKLSGTIAKMLYPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQICSFLAGLF- 410
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMI 237
S ++K L++ P +++ +W E S + Y G + RD
Sbjct: 411 -----HSKLIK--------RALVVAPKTLLSHWIKELSVVGLSAKTREYFGTSLKARDYE 457
Query: 238 LEK-LEACGVEVLITSFDSYRIHGSIL----------SEVN--WEIVIVDEAHRLKNEKS 284
L+ L+ G+ L+T++D R + L SE + W+ +I+DE H +KN +
Sbjct: 458 LQYILQDKGI--LLTTYDIVRNNSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPST 515
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
+ + LE+ + + I ++GT +QN + EL+ LF++ PG LG + F+E Y+ P+ G
Sbjct: 516 QRAKSLLEIPSAHCIVISGTPIQNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNE 575
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH------LMMGKEDNVVFCTMSDL 398
A +R RI + L ++ Y LRR K E + K + +V+ ++
Sbjct: 576 KNASDREKRIGSTVAKELRERIQPYFLRRMKNEVFKEDDATTAKLSRKNEIIVWLRLTAC 635
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q++ Y L+ + L GSPL + K++ CD P L+
Sbjct: 636 QRQLYEAFLRSEIV-------LSAFDGSPLAALTILKKI-----CDH-------PLLLTK 676
Query: 459 QQISNHLELIKP--NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
+ + LE ++ NP D ++ LA D D F D SC
Sbjct: 677 RAAEDLLEGMESMLNPEDAAVAEKLAMHLADVADRTDTD----------FQEKHDNISC- 725
Query: 517 KMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVD 576
K+ + L+ + +G +L+FS + +ML+++++ L+ GY F R+DG+T + R +V
Sbjct: 726 KISFILSLLDNLIPEGHNVLIFSQTRKMLNLIQESLVSNGYEFIRIDGTTKATDRTKIVS 785
Query: 577 DFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
DF +FL++++ GGLGL L A+RV++ DP WNP+ D Q+ DR++R GQ + V+V
Sbjct: 786 DFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQMKDVVV 845
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDL 696
+RL++ GS+EE +Y +Q++K L A K + RYF QD + ELF + ++
Sbjct: 846 YRLMTCGSVEEKIYRKQIFKGGLFRTATENKEQIRYFSQ-QDLR----ELFSLPKQGFNI 900
Query: 697 SDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLLSTGSKTRKSSDPE 756
S T + + HEE Q + K LET ++ ++LL + + T + + E
Sbjct: 901 S---LTQQQL--HEEHDSQHKMDEFLESHIKFLETQGIAGVSHHSLLFSKTATVQVAQEE 955
>gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Ailuropoda melanoleuca]
Length = 911
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 281/552 (50%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+PI+ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 282 FPIVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLI 341
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 342 WTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 393
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E ++ VLI S++ + V ++++I DE HRLKN K A + L
Sbjct: 394 KVEEFTKSPFYSVLIISYEMLLRSLDQVKNVKFDLLICDEGHRLKNSAIKTTTALISLSC 453
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI LTGT +QN + E + L D+V PG L + +R+ Y+EP+ ++ +A E +
Sbjct: 454 EKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEEEKELG 513
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
++R L + ++LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 514 EKRAAELTCLTGLFILRRT-QEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFC 572
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L SP L C+ L+++ NH L+ + +++
Sbjct: 573 LQGLLG---NSPH-----------------------LICIGALKKLCNHPCLLFNSIKEK 606
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D +++ +D+ + F+ + GK++ L KL+ +
Sbjct: 607 EYSSTWDGNEERSLYEGLVDVFPADYNPLMFME----EESGKLQVLMKLLAVIHELRPTE 662
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 663 KVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSK 722
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 723 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 782
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 783 QISKQDLSGAVV 794
>gi|383847118|ref|XP_003699202.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Megachile rotundata]
Length = 856
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 272/545 (49%), Gaps = 61/545 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V A + L +HQR G+ FLY+ N +G IL D+MGLGKT+Q I + +
Sbjct: 270 VSVDACLVNVLRQHQRYGIIFLYECIMGIKTSNYYGAILADEMGLGKTLQCITLVWTLLK 329
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEK 240
K S +LK VLI+ PSS+ NW EF W F+ + Y ++ + +
Sbjct: 330 KGPYG-SPVLKT--------VLIVTPSSLCNNWNKEFKHWLGFHRLCPYVVNAKNKLKDF 380
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ V+I S+D + ++N++++I DE HRLKN + K + + RI
Sbjct: 381 KKQARNSVVIISYDMLIRCEEEIEQINFDLIICDEGHRLKNNEIKAAKLLSNINCKRRIL 440
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
LTGT +QN + E + L ++V PG LG+ F+ +Y+ P+ + A + ER
Sbjct: 441 LTGTPIQNDLQEFFALVNFVNPGILGSNNEFKNYYENPIVASKCPHAAYSVASLGTERAT 500
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L R ++LRRT ++TI + K + VVFC +SD Q++ Y + NK +
Sbjct: 501 ELHEKTRSFILRRT-QDTINKYLPSKHELVVFCRLSDEQEKLYSLV-----TDTWFNKSV 554
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
+ P L + L++I NH +L N ++E
Sbjct: 555 LPNSNVPH-----------------------LTVITTLKKICNHPKLFY-NEKNE----- 585
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
F + + N S + CGK+ ++ LM + + +K++L SY
Sbjct: 586 ---------FWNN-SAINLNGTTNICKYTSREQYCGKISVVQTLMKNLKNTDEKLVLISY 635
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLN 599
+ LD+LE +G F RLDGSTP+ R +++ FNS + + ++FL+S +AGG+GLN
Sbjct: 636 YTQTLDLLETVCSTEGLHFLRLDGSTPATTRSKIIEQFNSKNHNSKIFLLSAKAGGVGLN 695
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L A+R+++FD +WNPA D QA R +R GQK+ V + RLL+ G++EE ++ RQV K L
Sbjct: 696 LFGASRLILFDSDWNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQVSKAGL 755
Query: 660 SNIAV 664
S V
Sbjct: 756 SETVV 760
>gi|146413953|ref|XP_001482947.1| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 281/548 (51%), Gaps = 87/548 (15%)
Query: 126 IIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
I + P I + L E+Q +G+ +L LY+N+ GIL D+MGLGKT+QTIAFL +
Sbjct: 110 ITESPLYIKDGTLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTIAFLGYL----- 164
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEAC 244
+K+ +D G +II P S + NW EF+RW+ ++ N+D E ++ C
Sbjct: 165 ----RYIKN--ID--GPFIIIVPKSTLDNWRREFARWTPEVKAVVLQGNKDDRAEFIKNC 216
Query: 245 ----GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+VLITSF+ S L + W+ ++VDEAHR+KNE S L ++NR+
Sbjct: 217 LLQADFDVLITSFEMVMREKSQLKKFRWQYIVVDEAHRIKNEDSSLSQIIRLFYSKNRLL 276
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
+TGT +QN + EL+ L +++ P G E F E+++ G + + D+ Q
Sbjct: 277 ITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFES---QGSKEEGNQ------DKVVQ 327
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L VL +LLRR K + L+ E N V+C M+++Q R Y++LL+ KD+
Sbjct: 328 QLHKVLSPFLLRRVKSDVETSLLPKIETN-VYCGMTEMQIRWYKKLLE---------KDI 377
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI---KPNPRDEPD 477
G + + E RL N+ +++L++ NH L +P P
Sbjct: 378 DAVNGV-VGKREGKTRLLNI--------------VMQLRKCCNHPYLFDGAEPGP----- 417
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D LA + GKM L+K++ + +G ++L+
Sbjct: 418 PYTTDEHLAY--------------------------NSGKMIILDKMLKKFREQGSRVLI 451
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP-SKQVFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +D +N+ K +FL++TRAGGL
Sbjct: 452 FSQMSRLLDILEDYCYLRDYEYCRIDGSTAHEDRIEAIDLYNAPDLDKFIFLLTTRAGGL 511
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ V+++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K
Sbjct: 512 GINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQK 571
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 572 LRLDQLVI 579
>gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus]
Length = 1046
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 275/540 (50%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 233
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 234 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 292
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 293 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 352
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 353 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 399
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 400 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 435
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L+ L++ NH L D +
Sbjct: 436 ---MKDIDVLNSSGKMDKMRLLNILMHLRKCCNHPYLF-------------DGAEPGPPY 479
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 480 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
Length = 806
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 280/553 (50%), Gaps = 82/553 (14%)
Query: 137 LLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLY+ + G I+ D+MGLGKT+Q IA L T+L
Sbjct: 217 LRPHQVEGVKFLYRCTTGLTAPDAQGCIMADEMGLGKTLQCIALLW-----------TLL 265
Query: 192 KDNKVDKKGYV---LIICPSSVIQNWEIEFSRW----STFNVSIYH-GPNRDMILEKLEA 243
K + + K V +I+CPSS++ NW EF++W + +++ H G +I + +
Sbjct: 266 KQSPIPGKPTVEKCIIVCPSSLVPNWANEFTKWLGTGAVGCMAVDHKGTKEQLISDVKQW 325
Query: 244 CGVE-------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
C V+I S+++ R ++ ++++DE HR+KN +S + A E+ +
Sbjct: 326 CAASGRSVTQPVMIVSYETLRNLTEVIGRAQVGLMMLDEGHRMKNSESMTFKALTEIHCK 385
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ L+GT +QN + E ++L ++ P LG + FR+ ++ + G+ A ++ ++++
Sbjct: 386 RRVILSGTPIQNDLSEYFSLLNFANPDYLGNKNEFRKNFENIILRGRDALATDKEKQMSE 445
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
E+ + L + K+++RRT + + + K ++VVF +S LQ Y+ ++ PE Q L
Sbjct: 446 EKLKELNMAVSKFIIRRT-NDILSKFLPVKYEHVVFTALSPLQLDLYKFFIESPETQAL- 503
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G S P L + L+++ NH LI P
Sbjct: 504 -----------------------LKGKASQP----LKAIGILKKLCNHPNLISP------ 530
Query: 477 DKQRKDAELASAVFGPDIDLV----GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
KD S V P+ ++ N ++ G K MR +E++ +
Sbjct: 531 ----KDDIPGSKVLLPEENIAERLDKKRPANPAWSG----KMMVLMRFIERMR---KNSD 579
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIST 591
DKI+L S + LD+LEK + F RLDG+ R LVD FN S++ +FL+S+
Sbjct: 580 DKIVLVSNYTQTLDLLEKLFAALRWGFMRLDGTMAVKKRGKLVDRFNDPESREFIFLLSS 639
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
+AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R + G+LEE V
Sbjct: 640 KAGGCGLNLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFIGTGTLEEQVLM 699
Query: 652 RQVYKQQLSNIAV 664
RQ YKQ LS V
Sbjct: 700 RQAYKQSLSACVV 712
>gi|134083941|emb|CAK43037.1| unnamed protein product [Aspergillus niger]
Length = 1418
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 287/556 (51%), Gaps = 80/556 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +++
Sbjct: 534 VQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIERKKNN 593
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEA 243
G L+I P S + NW +EF +W+ + + +Y GP R +++
Sbjct: 594 -------------GPFLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRW 640
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLT 302
+VL+T+++ ILS++ W +IVDE HR+KN +SKL + T R R+ LT
Sbjct: 641 GNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 700
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADE 357
GT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ + I
Sbjct: 701 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI--- 757
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VLR +LLRR K++ + + K++ V+ C S LQ + YR Q + +
Sbjct: 758 --RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYR--------QLVTH 806
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ S G + L N+ L++L+++ NH
Sbjct: 807 NKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------- 837
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
VF P D + I ++ GK L++++ + + G ++L+
Sbjct: 838 ---------PFVFEPVEDQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLM 884
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGL
Sbjct: 885 FFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGL 944
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K
Sbjct: 945 GLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 1004
Query: 657 QQLSNIAV-SGKLEKR 671
+ + +GK + +
Sbjct: 1005 LDMDGKVIQAGKFDNK 1020
>gi|351713467|gb|EHB16386.1| DNA repair and recombination protein RAD54B, partial
[Heterocephalus glaber]
Length = 903
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 283/561 (50%), Gaps = 73/561 (13%)
Query: 124 YPIIQV---PASINCRLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAF 175
+P++ V P ++ L HQ+EG+ FLY+ ++G IL D+M LGKT+Q I+
Sbjct: 281 FPLVDVVIDPHVVH-HLRPHQKEGIIFLYECVMGMRMNGRYGAILADEMCLGKTLQCISL 339
Query: 176 LAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNR 234
+ + + +++ + LI+ P S++ NW EF +W T + I+
Sbjct: 340 IWTLQCQGPYGGKPVIRKS--------LIVTPGSLVNNWRKEFKKWLGTERIKIFTVDQD 391
Query: 235 DMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ E +++ VLI S++ + + ++++I DE HRLKN K A + L
Sbjct: 392 HKVEEFIKSVFYSVLIISYEMLLRSLEQIKNIKFDLLICDEGHRLKNSAIKTTTALISLS 451
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
RI LTGT +QN + E + L D+V PG LG+ +R+ Y+EP+ + +A E +
Sbjct: 452 CEKRIILTGTPIQNDLQEFFALIDFVNPGVLGSLASYRKIYEEPIVMSREPSASEEEKEL 511
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
+ R L V ++LRRT +E I + K +NV+FC + LQ Y++LL I+
Sbjct: 512 GERRAAELTRVTGLFILRRT-QEVINKYLPPKIENVLFCRPATLQIELYKKLLNSQAIRF 570
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
+ L ++ P L C+ L+++ NH L
Sbjct: 571 CLQGSL-----------------------ENSPH---LICIGALKKLCNHPCL------- 597
Query: 475 EPDKQRKDAELASAVFGPDI-DLVGGNAQNESFIGLSDV-------KSCGKMRALEKLMY 526
L +++ G D GN + + +D K K++ L KL+
Sbjct: 598 ----------LFNSIKGKDCSSTCDGNEEKSLYEEKTDYNPLVFMEKDYSKLQVLAKLLA 647
Query: 527 SWAS--KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK 584
+K++L S+ + L+IL+ R GY+++RLDG TP + RQ +VD+FNS S
Sbjct: 648 VIHELRPTEKVVLVSHYTQTLNILQDVCKRYGYAYARLDGQTPISQRQQIVDNFNSKYSS 707
Query: 585 Q-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+FL+S++AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G
Sbjct: 708 DFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHAVHIYRLLTTG 767
Query: 644 SLEELVYTRQVYKQQLSNIAV 664
++EE +Y RQ+ KQ LS V
Sbjct: 768 TIEEKIYQRQISKQALSGAVV 788
>gi|405964762|gb|EKC30211.1| UPF0505 protein C16orf62-like protein [Crassostrea gigas]
Length = 1826
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 286/550 (52%), Gaps = 63/550 (11%)
Query: 133 INCRLLEHQREGVKFLYKL---YKN--KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++ L HQREGV FLY+ ++N G IL DDMGLGKT+Q I+ + ++ +
Sbjct: 238 LSVHLRPHQREGVTFLYECVMGFRNLSGRGAILADDMGLGKTLQCISLIWTLYKQGPYGG 297
Query: 188 STILKDNKVDKKGYVLIICPSSVIQ---NWEIEFSRW-STFNVSIYHGPNRDMILEKLEA 243
++K LII P S+++ NW +E +W T + + + + I E +
Sbjct: 298 KPVIKR--------ALIITPGSLVKASTNWFLEIKKWLGTERLKAFAVSSDNRIEEFVNT 349
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
++I S++ + L + ++I+I DE HRLKN K + T R+ LTG
Sbjct: 350 SIYPIVIISYEMFVRVYEQLQSLQFDIIICDEGHRLKNNNIKTTSLIASMPTPRRVVLTG 409
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E +++ ++ PG LG+ F+ ++ P+ ++ +A I + ER L
Sbjct: 410 TPIQNDLQEFFSIVEFCNPGLLGSSGSFKRVFENPIVASRQPSASPEDIELGAERGSELS 469
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
+ + ++LRR++E I +L K + V+FC S LQ Y ++LQ +
Sbjct: 470 RITKLFVLRRSQEINIKYLP-PKCEVVLFCKPSALQLSLYSQMLQGKLFRS--------- 519
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI--KPNPRDE-PDKQR 480
C R D L C+ L+++ NH LI K + +E PD
Sbjct: 520 ----------CLRSDGATH---------LVCIGALKKLCNHPSLIFTKASQAEECPDDIE 560
Query: 481 KDAELA--SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
+ + + S++F PD +A++ GK++ L +++ +KI++
Sbjct: 561 EGSVYSGLSSLFPPDYQEKIYSAEH-----------AGKLKVLSEILIQIHKDSEKIVIV 609
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLG 597
S + LDIL++F GY + RLDG T +N+RQ +V FNS ++VFL+S++AGG+G
Sbjct: 610 SNHTKTLDILQQFCSNCGYGYLRLDGQTSTNIRQEIVTKFNSKHCLEKVFLLSSKAGGVG 669
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL+ A+R++++D +WNPA DLQA R +R GQKR + ++RLL+ G++EE +Y RQ+ KQ
Sbjct: 670 LNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKRKIYIYRLLTTGTIEEKIYQRQISKQ 729
Query: 658 QLSNIAVSGK 667
LS + K
Sbjct: 730 GLSGAVMDLK 739
>gi|374108456|gb|AEY97363.1| FAER375Cp [Ashbya gossypii FDAG1]
Length = 1288
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 283/547 (51%), Gaps = 72/547 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + ++ + K
Sbjct: 453 VGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLY--------EVKK 504
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PNRDMILEKLEACG-VEVL 249
D+ G L+I P S I NW +EF +W+ + IY G PN+ L+ G +VL
Sbjct: 505 DS-----GPFLVIVPLSTITNWTLEFEKWAPSLTTVIYKGTPNQRRSLQHQVRIGDFDVL 559
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ S+L++ W +I+DE HR+KN +SKL Y KTR+R+ LTGT +QN
Sbjct: 560 LTTYEYIIKDRSLLAKHEWSHMIIDEGHRMKNAQSKLSYTLTHYYKTRHRLILTGTPLQN 619
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQRLTAPERFIRIADERKQHLVAVL 366
+ EL+ L ++V P + + F E+++ P + GQ + R+ H VL
Sbjct: 620 NLPELWALLNFVLPKIFNSSKTFDEWFNTPFSNTGGQEKLELTEEEALLVIRRLH--KVL 677
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
R +LLRR K+E + + K + VV C +S LQ + Y+++L+ + L G+
Sbjct: 678 RPFLLRRLKKE-VEKDLPDKVEKVVKCKLSGLQHQLYQQMLK--------HNALFVGAGT 728
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
K L+N +++L++I NH
Sbjct: 729 EGATKGGIKGLNN--------------KIMQLRKICNH---------------------- 752
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF +V N S + + GK L++++ + + G ++L+F +++D
Sbjct: 753 PFVFDEVEGVVNPTRTNSSLL----YRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMD 808
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL K + RLDG+T + R +++ FN+ S FL+STRAGGLGLNL +A+
Sbjct: 809 IMEDFLQMKNLKYMRLDGATKAEERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADT 868
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 869 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 928
Query: 665 SGKLEKR 671
+GK + +
Sbjct: 929 AGKFDNK 935
>gi|345306756|ref|XP_001509678.2| PREDICTED: probable global transcription activator SNF2L1-like
[Ornithorhynchus anatinus]
Length = 1011
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 270/539 (50%), Gaps = 88/539 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 136 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 182
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 183 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 242
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 243 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 302
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + + F ++D G Q+L + L AVL+ +LL
Sbjct: 303 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 349
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y R+L
Sbjct: 350 RRIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTRIL------------------------ 384
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 385 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 429
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D LV + GKM AL+KL+ +G ++L+FS R+LDILE +
Sbjct: 430 TDTHLVN---------------NSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDY 474
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 475 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYD 534
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
+WNP DLQA DR+ R GQK+ V VFRL++ ++E+ + R K +L +I + G+L
Sbjct: 535 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQQGRL 593
>gi|350634028|gb|EHA22392.1| hypothetical protein ASPNIDRAFT_51044 [Aspergillus niger ATCC 1015]
Length = 1412
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 287/556 (51%), Gaps = 80/556 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +++
Sbjct: 528 VQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIERKKNN 587
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEA 243
G L+I P S + NW +EF +W+ + + +Y GP R +++
Sbjct: 588 -------------GPFLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRW 634
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLT 302
+VL+T+++ ILS++ W +IVDE HR+KN +SKL + T R R+ LT
Sbjct: 635 GNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 694
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADE 357
GT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ + I
Sbjct: 695 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI--- 751
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VLR +LLRR K++ + + K++ V+ C S LQ + YR Q + +
Sbjct: 752 --RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYR--------QLVTH 800
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ S G + L N+ L++L+++ NH
Sbjct: 801 NKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------- 831
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
VF P D + I ++ GK L++++ + + G ++L+
Sbjct: 832 ---------PFVFEPVEDQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLM 878
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGL
Sbjct: 879 FFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGL 938
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K
Sbjct: 939 GLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 998
Query: 657 QQLSNIAV-SGKLEKR 671
+ + +GK + +
Sbjct: 999 LDMDGKVIQAGKFDNK 1014
>gi|317036939|ref|XP_001398370.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus
niger CBS 513.88]
Length = 1422
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 287/556 (51%), Gaps = 80/556 (14%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +++
Sbjct: 538 VQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIERKKNN 597
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEA 243
G L+I P S + NW +EF +W+ + + +Y GP R +++
Sbjct: 598 -------------GPFLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRW 644
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLT 302
+VL+T+++ ILS++ W +IVDE HR+KN +SKL + T R R+ LT
Sbjct: 645 GNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILT 704
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADE 357
GT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ + I
Sbjct: 705 GTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI--- 761
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VLR +LLRR K++ + + K++ V+ C S LQ + YR Q + +
Sbjct: 762 --RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYR--------QLVTH 810
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ S G + L N+ L++L+++ NH
Sbjct: 811 NKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------- 841
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
VF P D + I ++ GK L++++ + + G ++L+
Sbjct: 842 ---------PFVFEPVEDQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLM 888
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGL
Sbjct: 889 FFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPDSEYFCFLLSTRAGGL 948
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K
Sbjct: 949 GLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFK 1008
Query: 657 QQLSNIAV-SGKLEKR 671
+ + +GK + +
Sbjct: 1009 LDMDGKVIQAGKFDNK 1024
>gi|396082326|gb|AFN83936.1| SNF2 DNA/RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 828
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 311/634 (49%), Gaps = 114/634 (17%)
Query: 112 PFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQ 171
P EP Y + P I L ++Q EG+ +L +++N IL D+MGLGKT+Q
Sbjct: 40 PIEP--------YTFVSSPRFILHELKDYQIEGLNWLINMHENSINCILADEMGLGKTLQ 91
Query: 172 TIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYH 230
TIAFL + + + +KK + LI+ P S + NW+ EF ++ + V +++
Sbjct: 92 TIAFLGYI------------RYVRKEKKKH-LIVLPKSTLANWKREFKKFMPNYKVRVFY 138
Query: 231 GPNRDMI--LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
++M E++ + + +T+++ +IL+ VNW +I+DEAHR+KNE S L
Sbjct: 139 SSRKEMRKEAEEIMSSRWDACLTTYEMCINAKNILNTVNWSYIIIDEAHRIKNEHSLLSK 198
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
+R+ +TGT +QN + EL+ L +++ P E F
Sbjct: 199 IVRIFSCDHRLLITGTPLQNNVHELWALLNFIVPEIFNDAEKF----------------- 241
Query: 349 ERFIRIADERK----QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
ER++ DE + + +VL+ + LRR K + L K N+ + +S +Q+ YR
Sbjct: 242 ERYVMNIDEGDGEAIKRIRSVLQLFFLRREKIDVEKGLPPKKIINL-YSKLSAMQREWYR 300
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH 464
LL+ +DL SPL G P +++ +++L++ NH
Sbjct: 301 MLLK---------RDL-----SPL-------------GNTRDPKGMLMNVVMQLRKCCNH 333
Query: 465 LELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKL 524
L P EP+ D + +++ GKM L+KL
Sbjct: 334 PYLF---PDAEPEPYTNDKHI--------------------------IENSGKMMMLDKL 364
Query: 525 MYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS- 583
+ ++ +KG ++L+FS MLDILE + + KGY + R+DGST R +D FN+ S
Sbjct: 365 LANFKAKGSRVLIFSQMSMMLDILEDYAVFKGYKYCRIDGSTSYRERTEAIDAFNAEGSD 424
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
K +FL++TRAGGLG+NL +A+ VV+FD +WNP DLQAQDR+ R GQK+ V+VFRL+S
Sbjct: 425 KFIFLLTTRAGGLGINLSTADTVVLFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISEN 484
Query: 644 SLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGIC----NLFRDLSDN 699
++EE + R + K +L +I + G+ + + Q EL I + D +
Sbjct: 485 TVEERIVYRSLQKLRLDDILLQGRYHR-------NSTVSQSELIDILANGMEIGEDEGKD 537
Query: 700 LFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI 733
+II EE+ ++ C + GL T+I
Sbjct: 538 ESIDDIIRRGEEKTREMNMRLCDFKISDGLNTNI 571
>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
Length = 852
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 286/578 (49%), Gaps = 67/578 (11%)
Query: 113 FEPLVLSK-DG--EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKH-----------GG 158
FEPLVL + DG + I V + L HQREGV+F+++ G
Sbjct: 124 FEPLVLWQPDGNEDGATIVVDPIVAKFLRPHQREGVQFMFECVTGLREFSKAGDAAWSGC 183
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
IL DDMGLGKT+Q+I L + + + + + K+ ++I+ P+S++ NWE E
Sbjct: 184 ILADDMGLGKTLQSITLLWTLLRQG-------FQGSPIAKR--IIIVTPTSLVSNWESEI 234
Query: 219 SRWSTFNVSIYH--GPNRDMILEKLEAC-----GVEVLITSFDSYRIH-GSILSEVNWEI 270
+W S+ +R +L+ + + ++LI S++++R+H G E ++
Sbjct: 235 KKWLGGRASVIAICEASRAEVLQDVASFLSPRNAFQILIISYETFRLHAGKFQKEGACDL 294
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
+I DEAHRLKN+ + A L+ R+ L+GT MQN + E Y + ++ PG LG
Sbjct: 295 LICDEAHRLKNDHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGDVAA 354
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNV 390
FR +Y P+ G+ A E ++ ER L + +++LRRT HL K V
Sbjct: 355 FRRYYQNPILRGREPEATEEARKLGLERSAELSEKVNQFILRRTNALLSNHLP-PKIVEV 413
Query: 391 VFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL 450
V C +++LQ+ Y + ++ + D
Sbjct: 414 VCCKLTNLQRELYTHFIHSKNVRLALQ--------------------------DKAKRAR 447
Query: 451 VLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLS 510
VL + L+++ +H +LI R + E F ++ G + S++ LS
Sbjct: 448 VLASITALKKLCSHPKLIYDTVR-AGGSEAAGFENCMQFFPKEMHTGRGTPSDGSWVKLS 506
Query: 511 DVKSCGKMRALEKLMYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSN 569
GKM L +L+ + K D+I+L S + LD+ + + Y + RLDGST
Sbjct: 507 -----GKMFVLARLLENLRKKTNDRIVLVSNYTQTLDLFAQLCRERNYPYVRLDGSTSIG 561
Query: 570 LRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
RQ LV FN S ++ FL+S++AGG GLNL+ NR+V+FDP+WNPA D QA R +R
Sbjct: 562 KRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 621
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
GQK+ V ++R L+ G++EE VY RQ+ K+ L + +SG
Sbjct: 622 GQKKRVYIYRFLATGTIEEKVYQRQISKEGLQKV-ISG 658
>gi|45190977|ref|NP_985231.1| AER375Cp [Ashbya gossypii ATCC 10895]
gi|44984045|gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 283/547 (51%), Gaps = 72/547 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + ++ + K
Sbjct: 453 VGGTLKEYQIRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLY--------EVKK 504
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PNRDMILEKLEACG-VEVL 249
D+ G L+I P S I NW +EF +W+ + IY G PN+ L+ G +VL
Sbjct: 505 DS-----GPFLVIVPLSTITNWTLEFEKWAPSLTTVIYKGTPNQRRSLQHQVRIGDFDVL 559
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ S+L++ W +I+DE HR+KN +SKL Y KTR+R+ LTGT +QN
Sbjct: 560 LTTYEYIIKDRSLLAKHEWSHMIIDEGHRMKNAQSKLSYTLTHYYKTRHRLILTGTPLQN 619
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQRLTAPERFIRIADERKQHLVAVL 366
+ EL+ L ++V P + + F E+++ P + GQ + R+ H VL
Sbjct: 620 NLPELWALLNFVLPKIFNSSKTFDEWFNTPFSNTGGQEKLELTEEEALLVIRRLH--KVL 677
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
R +LLRR K+E + + K + VV C +S LQ + Y+++L+ + L G+
Sbjct: 678 RPFLLRRLKKE-VEKDLPDKVEKVVKCKLSGLQHQLYQQMLK--------HNALFVGAGT 728
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
K L+N +++L++I NH
Sbjct: 729 EGATKGGIKGLNN--------------KIMQLRKICNH---------------------- 752
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF +V N S + + GK L++++ + + G ++L+F +++D
Sbjct: 753 PFVFDEVEGVVNPTRTNSSLL----YRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMD 808
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL K + RLDG+T + R +++ FN+ S FL+STRAGGLGLNL +A+
Sbjct: 809 IMEDFLQMKNLKYMRLDGATKAEERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADT 868
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 869 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 928
Query: 665 SGKLEKR 671
+GK + +
Sbjct: 929 AGKFDNK 935
>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
Length = 807
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 286/568 (50%), Gaps = 71/568 (12%)
Query: 120 KDGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTI 170
K EYP +VP I+ +L + HQ EGVKFLY+ + HG I+ D+MGLGKT+
Sbjct: 196 KPKEYP--EVPVVIDPKLAKILRPHQVEGVKFLYRATTGLINPKAHGCIMADEMGLGKTL 253
Query: 171 QTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
Q IA L + + TI K +++CPSS+++NW EF +W V + +
Sbjct: 254 QCIALLWTLLKQSPQGKGTISK---------AIVVCPSSLVRNWAAEFVKWLGEGVVVPY 304
Query: 231 GPNRDMILEKL--------EACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+ +L EA G +V LI S+D+ R +++ +++ DE H+
Sbjct: 305 AVDGSQKPAELTAGLRQWAEAEGRKVTRPVLIISYDTLRRQVGAIADSEVGLLLADEGHK 364
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S+ + A +L + R+ L+GT +QN ++E ++L ++ PG LGT+ FR+ Y+ P
Sbjct: 365 LKNGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSLLNFSNPGLLGTKGEFRKNYEIP 424
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ ++ + A+ + + +++ ++RRT + +L + K ++VVFC ++
Sbjct: 425 ILKGRDADGTDKDVEKAEAKLLEMASIVSPLIIRRTNDILSKYLPV-KYEHVVFCNLAPF 483
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
QK Y + E + L+ + + L + K+L N P L+KL
Sbjct: 484 QKSLYVQFRTSKEARSLLKGEKSSEGTTTLNAIGILKKLCN------------HPDLLKL 531
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+ P+ PD++ G+ + + S K
Sbjct: 532 PDEIEGCRKVFPDDYAPPDER-------------------GSRDRDIYPHFS-----AKF 567
Query: 519 RALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
LE+++ S A DKI++ S LD++EK ++ Y RLDG+ N R LV
Sbjct: 568 LILERMLRSINAETNDKIVIISNYTATLDLIEKMCRQRRYGCLRLDGTMNINKRAKLVTQ 627
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN ++ +FL+S++AGG GLNL+ ANR+++ DP+WNPA D QA R +R GQK+ V
Sbjct: 628 FNDPEGQEFIFLLSSKAGGCGLNLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFV 687
Query: 637 FRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+RL++ G++EE ++ RQ KQ LS V
Sbjct: 688 YRLIATGTIEEKIFQRQSMKQSLSTCVV 715
>gi|83764570|dbj|BAE54714.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1113
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 284/573 (49%), Gaps = 91/573 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P ++ + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 179 PPFVHGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 228
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ D G L+ P S + NW+ EF +W+ NV + G + +I E+L
Sbjct: 229 ---RHVCDITGPHLVAVPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKLINERLLDED 285
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 286 FDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRVFHSRNRLLITGTP 345
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ D Q L V
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQESD-------------QDTVVQQLHRV 392
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MS++Q + Y+++L+ KD+ G
Sbjct: 393 LRPFLLRRVKSDVEKSLLPKKEVN-LYVPMSEMQVKWYQKILE---------KDIDAVNG 442
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 443 AA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 485
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 486 -----------------------------VYNAGKMSILDKLLARMQKQGSRVLIFSQMS 516
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + Y++ R+DG+T R + +D++N S K VFL++TRAGGLG+NL
Sbjct: 517 RVLDILEDYCVFREYNYCRIDGTTAHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLT 576
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+VFR ++ ++EE V R K +L
Sbjct: 577 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQ 636
Query: 662 IAVSGKLEKRYFEGVQDCKEFQGEL-FGICNLF 693
+ + ++ + +E G + G N+F
Sbjct: 637 LVIQQGRAQQQTKNAASKEELLGMIQHGAANVF 669
>gi|85083489|ref|XP_957128.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora crassa OR74A]
gi|28918214|gb|EAA27892.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora crassa OR74A]
Length = 1455
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 292/558 (52%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K +
Sbjct: 508 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKQ-------- 559
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF +W+ I Y GP R + EK+ +VL
Sbjct: 560 -----QNGPYLVIVPLSTLTNWNLEFDKWAPSVAKIVYKGPPNTRKLQQEKIRRGEFQVL 614
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 615 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQN 674
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+++ ++V P + + F E+++ P + GQ LT E+ + I R+ H
Sbjct: 675 NLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVI---RRLH-- 729
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ+R Y++++ +I L++
Sbjct: 730 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQQRLYKQMVTHQKI--LVSDGKGGK 786
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH P DE + Q
Sbjct: 787 TG--------ARGLSNM--------------IMQLRKLCNH-----PFVFDEVENQMNPT 819
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ DL+ ++ GK L++++ + + G ++L+F
Sbjct: 820 NTSN-------DLLW--------------RTAGKFELLDRVLPKYKATGHRVLMFFQMTA 858
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E FL +G + RLDG+T + R L+ FN+ S +FL+STRAGGLGLNL +
Sbjct: 859 IMDIMEDFLRFRGIQYLRLDGTTKAEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT 918
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 919 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGK 978
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 979 VIQAGRFDNKSSETDRDA 996
>gi|344272964|ref|XP_003408298.1| PREDICTED: DNA repair and recombination protein RAD54B [Loxodonta
africana]
Length = 883
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 274/546 (50%), Gaps = 62/546 (11%)
Query: 135 CRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
C L HQ+ GV FLY+ + G IL D+MGLGKT+Q I+ + + +
Sbjct: 267 CHLRPHQKGGVIFLYECVMGMRVDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKP 326
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEV 248
++K LI+ P S++ NW EF +W + + I+ + E + + V
Sbjct: 327 VIKK--------TLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQDHKVEEFIRSPLYSV 378
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
LI S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 379 LIISYEMLLRSLDQIKNIRFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQN 438
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + R L +
Sbjct: 439 DLQEFFALIDFVNPGILGSLSSYRKVYEEPIIISREPSASEEEKNLGVRRAAELTRLTGL 498
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
++LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 499 FILRRT-QEVINKYLPPKIENVVFCQPGALQIELYRKLLNSKAVRFCLQGLL-------- 549
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI-------KPNPRDEPDKQRK 481
++ P L C+ L+++ NH L+ + +P + +++R
Sbjct: 550 ---------------ENSPH---LICIGALKKLCNHPCLLFRSIKEKECSPTCDENEERS 591
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM--YSWASKGDKILLFS 539
E VF D + + + K GK++ L KL+ +K++L S
Sbjct: 592 LYEGLINVFPDDYNPL-----------MFTEKESGKLQVLSKLLEVIHELRPSEKVVLVS 640
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LDIL++ R GY+ +RLDG TP + RQ +VD FNS S +FL+S++AGG+GL
Sbjct: 641 NYTKTLDILQEVCKRHGYAHTRLDGQTPISQRQHIVDGFNSKYSSDFIFLLSSKAGGVGL 700
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ
Sbjct: 701 NLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQG 760
Query: 659 LSNIAV 664
LS +
Sbjct: 761 LSGAVM 766
>gi|317138160|ref|XP_001816716.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus oryzae
RIB40]
gi|391870029|gb|EIT79217.1| chromatin remodeling complex WSTF-ISWI, small subunit [Aspergillus
oryzae 3.042]
Length = 1122
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 284/573 (49%), Gaps = 91/573 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P ++ + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 188 PPFVHGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYL---------- 237
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ D G L+ P S + NW+ EF +W+ NV + G + +I E+L
Sbjct: 238 ---RHVCDITGPHLVAVPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKLINERLLDED 294
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 295 FDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRVFHSRNRLLITGTP 354
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ D Q L V
Sbjct: 355 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQESD-------------QDTVVQQLHRV 401
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MS++Q + Y+++L+ KD+ G
Sbjct: 402 LRPFLLRRVKSDVEKSLLPKKEVN-LYVPMSEMQVKWYQKILE---------KDIDAVNG 451
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 452 AA-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 494
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 495 -----------------------------VYNAGKMSILDKLLARMQKQGSRVLIFSQMS 525
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGGLGLNLV 601
R+LDILE + + + Y++ R+DG+T R + +D++N S K VFL++TRAGGLG+NL
Sbjct: 526 RVLDILEDYCVFREYNYCRIDGTTAHEDRIAAIDEYNKPGSDKFVFLLTTRAGGLGINLT 585
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ VV++D +WNP DLQA DR+ R GQ + V+VFR ++ ++EE V R K +L
Sbjct: 586 TADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQ 645
Query: 662 IAVSGKLEKRYFEGVQDCKEFQGEL-FGICNLF 693
+ + ++ + +E G + G N+F
Sbjct: 646 LVIQQGRAQQQTKNAASKEELLGMIQHGAANVF 678
>gi|355733595|gb|AES11080.1| RAD26L hypothetical protein [Mustela putorius furo]
Length = 494
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 213/357 (59%), Gaps = 9/357 (2%)
Query: 354 IADERK--QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
+A RK Q L + + LRRTK I + KED +V+C+++D QK Y+ +L+ +
Sbjct: 1 LATGRKAMQRLAKKMSGWFLRRTKA-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETKD 59
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
+ ++ PCSC S + CC + N G L L LQ+++NH+ L++
Sbjct: 60 MTLILQSSEPCSCSSGRKRRNCCYKT-NSHG--ETVKTLYFSYLAVLQKVANHVALLQST 116
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
+ ++ + VF D V +++ +F LSD K GKM+ L++L+
Sbjct: 117 GTSK-HQETLIKRICDQVFSKFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKN 174
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIST 591
DKILLFS+S ++LD+L+++ + G + RLDGST S R +V +FNS+ + L+ST
Sbjct: 175 KDKILLFSFSTKLLDVLQQYCMAAGLEYRRLDGSTKSEERLKIVKEFNSTQDVNICLVST 234
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
AGGLGLN V AN VV+FDP WNPA DLQA DR++R GQ R V VFRL+S G++EE++Y
Sbjct: 235 MAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYL 294
Query: 652 RQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 295 RQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVYNLFKLRSQGSCLTKDILE 351
>gi|356511188|ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 938
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 318/645 (49%), Gaps = 81/645 (12%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMG 165
+ DH P ++ G ++ A I L HQREG+K+L+ L+ GGILGDDMG
Sbjct: 230 ELDHFEPENDGSITLTGPRSTYKLQARIANMLYPHQREGLKWLWSLHCLGKGGILGDDMG 289
Query: 166 LGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TF 224
LGKT+Q FLA +F S +++ LI+ P +++ +W E S +
Sbjct: 290 LGKTMQMCGFLAGLF------HSRLIR--------RALIVAPKTLLPHWIKELSAVGLSE 335
Query: 225 NVSIYHGPNRDMILEKLEACGVE--VLITSFDSYRIHGSIL------------SEVNWEI 270
Y G + + +L+ + VL+T++D R + L V W+
Sbjct: 336 KTREYFGTSTKLREYELQYILQDKGVLLTTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDY 395
Query: 271 VIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREH 330
+I+DE H +KN ++ + LE+ + + I ++GT +QN + EL+ LF++ P LG E
Sbjct: 396 MILDEGHLIKNPSTQRAKSLLEIPSAHCIIISGTPLQNNLKELWALFNFCCPELLGDHEW 455
Query: 331 FREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH-------LM 383
F+E ++ P+ G A R R+ + L + Y LRR K E +
Sbjct: 456 FKERFENPILRGNDKHASYREKRVGSSVAKELRDCIHPYFLRRLKSEIFNQDDEKTTTKL 515
Query: 384 MGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGC 443
K++ +V+ ++ +Q+ Y L + I+ GSPL + K++ C
Sbjct: 516 SQKQEIIVWLRLTSVQRHLYEAFLNSKIVLSAID-------GSPLAAITILKKI-----C 563
Query: 444 DSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQN 503
D P L+ + LE I + E +A +A + D+ G
Sbjct: 564 DH-------PHLLTKRAAEGVLEGIDSMLKPE------EANVAEKLAMHIADVAG----K 606
Query: 504 ESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLD 563
+ F DV SC K+ + L+ + +G +L+FS + +ML+++E+ L+ +GY F R+D
Sbjct: 607 DKFKDKQDV-SC-KISFIMSLLDNLIPEGHCVLIFSQTRKMLNLIEECLVSEGYDFLRID 664
Query: 564 GSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQD 623
G+T ++ R +V+DF +FL++++ GGLGL L A+RV++ DP+WNP+ D Q+ D
Sbjct: 665 GTTKASDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLTRADRVIVVDPSWNPSTDNQSVD 724
Query: 624 RSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQ 683
R++R GQK+ V+V+RL++ G++EE +Y +QVYK L IA K + RYF Q
Sbjct: 725 RAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKIATEHKEQIRYFS--------Q 776
Query: 684 GELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKG 728
+L G+ +L ++ D + + + ++ +R H + FK
Sbjct: 777 QDLRGLFSLPKEGFD------VSVTQRQLNEEHDRQHTVDDSFKA 815
>gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca]
Length = 810
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 281/552 (50%), Gaps = 50/552 (9%)
Query: 124 YPIIQV--PASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFL 176
+PI+ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 181 FPIVDVVIDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLI 240
Query: 177 AAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD 235
+ + ++K LI+ P S++ NW EF +W + + I+
Sbjct: 241 WTLQCQGPYGGKPVIKKT--------LIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDH 292
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+ E ++ VLI S++ + V ++++I DE HRLKN K A + L
Sbjct: 293 KVEEFTKSPFYSVLIISYEMLLRSLDQVKNVKFDLLICDEGHRLKNSAIKTTTALISLSC 352
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RI LTGT +QN + E + L D+V PG L + +R+ Y+EP+ ++ +A E +
Sbjct: 353 EKRIILTGTPVQNDLQEFFALIDFVNPGILSSLSSYRKIYEEPIIISRQPSASEEEKELG 412
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
++R L + ++LRRT +E I + K +NVVFC LQ YR+LL ++
Sbjct: 413 EKRAAELTCLTGLFILRRT-QEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFC 471
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ L SP L C+ L+++ NH L+ + +++
Sbjct: 472 LQGLLG---NSPH-----------------------LICIGALKKLCNHPCLLFNSIKEK 505
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGD 533
D +++ +D+ + F+ + GK++ L KL+ +
Sbjct: 506 EYSSTWDGNEERSLYEGLVDVFPADYNPLMFME----EESGKLQVLMKLLAVIHELRPTE 561
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
K++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++
Sbjct: 562 KVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSK 621
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y R
Sbjct: 622 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQR 681
Query: 653 QVYKQQLSNIAV 664
Q+ KQ LS V
Sbjct: 682 QISKQDLSGAVV 693
>gi|83764905|dbj|BAE55049.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1417
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 290/561 (51%), Gaps = 86/561 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E P I V + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 528 EQPTILVGGT----LKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEK 583
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE 239
+++ G L+I P S + NW +EF +W+ + +Y GP R +
Sbjct: 584 KKNN-------------GPFLVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQ 630
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNR 298
++ +VL+T+++ ILS+V W +IVDE HR+KN +SKL + T R R
Sbjct: 631 QIRWGNFQVLLTTYEYIIKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYR 690
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIR 353
+ LTGT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ +
Sbjct: 691 LILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLV 750
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
I + L VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q
Sbjct: 751 I-----RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYK--------Q 796
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ + + S G + L N+ L++L+++ NH
Sbjct: 797 LVTHNKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH--------- 831
Query: 474 DEPDKQRKDAELASAVFGPDIDLVG-GNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
VF P D + G N+ ++ GK L++++ + + G
Sbjct: 832 -------------PFVFEPVEDQMNPGRGTNDLLW-----RTSGKFELLDRILPKFRATG 873
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLIST 591
++L+F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+ST
Sbjct: 874 HRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAENSEYFCFLLST 933
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE +
Sbjct: 934 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILE 993
Query: 652 RQVYKQQLSNIAV-SGKLEKR 671
R +K + + +GK + +
Sbjct: 994 RAQFKLDMDGKVIQAGKFDNK 1014
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 289/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 107 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 153
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 154 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 213
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 214 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 273
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + + F ++D G Q+L + L AVL+ +LL
Sbjct: 274 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFLL 320
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + +S +Q+ Y R+L
Sbjct: 321 RRIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTRIL------------------------ 355
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 356 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 400
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D L+ + GKM L+KL+ +G ++LLFS R+LDILE +
Sbjct: 401 TDTHLIT---------------NSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDY 445
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 446 CMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYD 505
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 506 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 565
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 566 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTEEDITTILERGEKK 611
>gi|345780848|ref|XP_532592.3| PREDICTED: DNA repair and recombination protein RAD54-like [Canis
lupus familiaris]
Length = 747
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 282/546 (51%), Gaps = 70/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 153 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLIWTLLRQSPECKPEID 212
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEAC----G 245
K +++ PSS+++NW E +W + G ++D I +KLE G
Sbjct: 213 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 263
Query: 246 VEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V V LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 264 VRVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL-QLPEIQCLINKDL 420
L +++ + L+RRT + + + K + VV C ++ LQ Y+R L Q + L +
Sbjct: 384 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRFLKQAKPAEELREGKM 442
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S S +T L+++ NH LI +E D
Sbjct: 443 TVSSLSSITL---------------------------LKKLCNHPALIYDKCVEEED--- 472
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFS 539
E A +F P Q LS GKM L+ ++ S+ DK++L S
Sbjct: 473 -GFEGALEIFPPTYSAKALEPQ------LS-----GKMLVLDYILAVTRSRSSDKVVLVS 520
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ EK + Y + RLDG+ R +V+ FN+ S VF++S++AGG GL
Sbjct: 521 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGL 580
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+
Sbjct: 581 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 640
Query: 659 LSNIAV 664
LS+ V
Sbjct: 641 LSSCVV 646
>gi|391863236|gb|EIT72547.1| superfamily II DNA/RNA helicase [Aspergillus oryzae 3.042]
Length = 1422
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 290/561 (51%), Gaps = 86/561 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E P I V + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 533 EQPTILVGGT----LKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEK 588
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE 239
+++ G L+I P S + NW +EF +W+ + +Y GP R +
Sbjct: 589 KKNN-------------GPFLVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQ 635
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNR 298
++ +VL+T+++ ILS+V W +IVDE HR+KN +SKL + T R R
Sbjct: 636 QIRWGNFQVLLTTYEYIIKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYR 695
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIR 353
+ LTGT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ +
Sbjct: 696 LILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLV 755
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
I + L VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q
Sbjct: 756 I-----RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYK--------Q 801
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ + + S G + L N+ L++L+++ NH
Sbjct: 802 LVTHNKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH--------- 836
Query: 474 DEPDKQRKDAELASAVFGPDIDLVG-GNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
VF P D + G N+ ++ GK L++++ + + G
Sbjct: 837 -------------PFVFEPVEDQMNPGRGTNDLLW-----RTSGKFELLDRILPKFRATG 878
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLIST 591
++L+F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+ST
Sbjct: 879 HRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAENSEYFCFLLST 938
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE +
Sbjct: 939 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILE 998
Query: 652 RQVYKQQLSNIAV-SGKLEKR 671
R +K + + +GK + +
Sbjct: 999 RAQFKLDMDGKVIQAGKFDNK 1019
>gi|317138645|ref|XP_001817051.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus
oryzae RIB40]
Length = 1422
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 290/561 (51%), Gaps = 86/561 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E P I V + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 533 EQPTILVGGT----LKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEK 588
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE 239
+++ G L+I P S + NW +EF +W+ + +Y GP R +
Sbjct: 589 KKNN-------------GPFLVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQ 635
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNR 298
++ +VL+T+++ ILS+V W +IVDE HR+KN +SKL + T R R
Sbjct: 636 QIRWGNFQVLLTTYEYIIKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYR 695
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIR 353
+ LTGT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ +
Sbjct: 696 LILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLV 755
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
I + L VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q
Sbjct: 756 I-----RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYK--------Q 801
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ + + S G + L N+ L++L+++ NH
Sbjct: 802 LVTHNKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH--------- 836
Query: 474 DEPDKQRKDAELASAVFGPDIDLVG-GNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
VF P D + G N+ ++ GK L++++ + + G
Sbjct: 837 -------------PFVFEPVEDQMNPGRGTNDLLW-----RTSGKFELLDRILPKFRATG 878
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLIST 591
++L+F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+ST
Sbjct: 879 HRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAENSEYFCFLLST 938
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE +
Sbjct: 939 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILE 998
Query: 652 RQVYKQQLSNIAV-SGKLEKR 671
R +K + + +GK + +
Sbjct: 999 RAQFKLDMDGKVIQAGKFDNK 1019
>gi|336469381|gb|EGO57543.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora tetrasperma FGSC 2508]
gi|350290984|gb|EGZ72198.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Neurospora tetrasperma FGSC 2509]
Length = 1454
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 292/558 (52%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K +
Sbjct: 507 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKQ-------- 558
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF +W+ I Y GP R + EK+ +VL
Sbjct: 559 -----QNGPYLVIVPLSTLTNWNLEFDKWAPSVAKIVYKGPPNTRKLQQEKIRRGEFQVL 613
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 614 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQN 673
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+++ ++V P + + F E+++ P + GQ LT E+ + I R+ H
Sbjct: 674 NLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVI---RRLH-- 728
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ+R Y++++ +I L++
Sbjct: 729 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQQRLYKQMVTHQKI--LVSDGKGGK 785
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH P DE + Q
Sbjct: 786 TG--------ARGLSNM--------------IMQLRKLCNH-----PFVFDEVENQMNPT 818
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ DL+ ++ GK L++++ + + G ++L+F
Sbjct: 819 NTSN-------DLLW--------------RTAGKFELLDRVLPKYKATGHRVLMFFQMTA 857
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E FL +G + RLDG+T + R L+ FN+ S +FL+STRAGGLGLNL +
Sbjct: 858 IMDIMEDFLRFRGIQYLRLDGTTKAEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT 917
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 918 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGK 977
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 978 VIQAGRFDNKSSETDRDA 995
>gi|453083597|gb|EMF11642.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1439
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 287/559 (51%), Gaps = 84/559 (15%)
Query: 126 IIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDES 185
I Q + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 558 IAQSTNLVGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKR- 616
Query: 186 SDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLE 242
+ G L+I P S + NW EF RW+ + N +Y GP R +++
Sbjct: 617 ------------QHGPYLVIVPLSTLTNWNSEFERWAPSVNRIVYKGPPAQRKNFQQQIR 664
Query: 243 ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGL 301
+VL+T+++ ILS++ W +IVDE HR+KN +SKL + TR RI L
Sbjct: 665 YGNFQVLLTTYEFIIKDRPILSKIKWLHMIVDEGHRMKNAQSKLSSTISQYYHTRYRIIL 724
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHG-----QRLTAPERFIRIAD 356
TGT +QN + EL+ + ++V P + + F E+++ P + LT E + I
Sbjct: 725 TGTPLQNNLTELWAMLNFVLPNIFKSAKSFDEWFNTPFANTGGGDKMELTEEESILVI-- 782
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
+ L VLR +LLRR K++ + + K++ V+ C +S LQ + Y++L+ I
Sbjct: 783 ---RRLHKVLRPFLLRRLKKD-VEKDLPDKQERVIKCNLSALQAKLYKQLMLHNRI---- 834
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL--VLPCLVKLQQISNHLELIKPNPRD 474
N+ G D + + L++L+++ NH P +
Sbjct: 835 ----------------------NVIGADGKKTGMRGLSNMLMQLRKLCNH-----PFVFE 867
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
E + Q ++ + DL+ ++ GK L++++ + + G +
Sbjct: 868 EVEDQMNPQKMTN-------DLIW--------------RTAGKFELLDRVLPKFKATGHR 906
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRA 593
+LLF ++++I+E FL +G + RLDGST ++ R L+ FN+ S+ FL+STRA
Sbjct: 907 VLLFFQMTQIMNIMEDFLRFRGIKYLRLDGSTKADDRSELLKLFNAPDSEYFCFLLSTRA 966
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLGLNL +A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R
Sbjct: 967 GGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERA 1026
Query: 654 VYKQQLSNIAV-SGKLEKR 671
YK + + +GK + +
Sbjct: 1027 QYKLDMDGKVIQAGKFDNK 1045
>gi|395512148|ref|XP_003760306.1| PREDICTED: DNA repair and recombination protein RAD54B [Sarcophilus
harrisii]
Length = 912
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 276/538 (51%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + I
Sbjct: 297 HLRPHQKEGIVFLYECVMGMRMNGRFGAILADEMGLGKTLQCISLVWTLLRQGLYGGKPI 356
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + ++ I + + + VL
Sbjct: 357 IKKT--------LIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQDHKIEDFVNSPLYSVL 408
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+ S++ + + ++++I DE HRLKN K A + L R+ LTGT +QN
Sbjct: 409 VISYEMLLRCLDQIKNIKFDLLICDEGHRLKNSSIKTTTALVGLSCEKRVILTGTPIQND 468
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E Y L ++V PG LG+ +R+ Y+EP+ + +A E ++ ++R L + +
Sbjct: 469 LQEFYALIEFVNPGILGSLSSYRKIYEEPIIASREPSATEEEKKLGEKRAAELTRLTGLF 528
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 529 ILRRT-QEVINKYLPPKIENVVFCRPGRLQIELYRKLLDSQAVRFCLQGVL--------- 578
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D E
Sbjct: 579 --------------ENSPH---LICIGALKKLCNHPCLLFKSLKEKECNSSSD-EYEEYN 620
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM--YSWASKGDKILLFSYSVRMLDI 547
F L+ + + + S+ S GK+ L KL+ S +K++L S + L+I
Sbjct: 621 FSE--SLIDAYPADYNPLTFSETDS-GKLHVLTKLLAVIHELSPSEKVVLVSNYTQTLNI 677
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+ SRLDG TP RQ +VD FNS S VFL+S++AGG+GLNL+ + +
Sbjct: 678 LQEVCKRHGYNCSRLDGQTPVVQRQQIVDGFNSKHSSDFVFLLSSKAGGVGLNLIGGSHL 737
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 738 ILYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVV 795
>gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex]
Length = 4355
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 280/549 (51%), Gaps = 96/549 (17%)
Query: 128 QVPASINCRLL-EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ P +N L E+Q EG+ +L + N IL D+MGLGKTIQ++AF+ +V
Sbjct: 1691 ESPVYLNGNTLREYQLEGLNWLSFSWFNGRNCILADEMGLGKTIQSLAFVESV------- 1743
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEK---- 240
+++ +G L+I P S I NW+ EF W+ N+ +YHG P+R M+ E
Sbjct: 1744 -------HRLGIRGPFLVIAPLSTIPNWQREFETWTNLNIIVYHGSNPSRTMLQEYEFHY 1796
Query: 241 --------LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE 292
E VLIT+F+ L EV W + ++DEAHRLKN+ KL
Sbjct: 1797 KDSKGNQIKEMYKFNVLITTFEMIISDCMELREVPWRLCVIDEAHRLKNKNCKLLEGLRL 1856
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERF 351
L+ +R+ L+GT +QN I ELY+L +++ P + E F R+F D LK
Sbjct: 1857 LQMEHRVLLSGTPLQNNISELYSLLNFLEPAQFASSEDFTRDFGD--LK----------- 1903
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP- 410
+D++ Q L A+L+ +LRR KE+ + + KE+ +V ++++QK+ YR +L+
Sbjct: 1904 ---SDDQVQKLQALLKPMMLRRLKED-VEKSLAPKEETIVEVELTNMQKKYYRGILERNF 1959
Query: 411 --EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
+ N ++P + + +CC L+G + +QI +++
Sbjct: 1960 SFLTKGTTNANVPNLMNTMMELRKCCIHPYLLNGAE--------------EQIQYEMKV- 2004
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
S PD+ +++ I +S GK+ ++KL+
Sbjct: 2005 ------------------SHTSDPDL-------HHKALI-----QSSGKLVLVDKLLPKL 2034
Query: 529 ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VF 587
+ G ++L+FS VR LDILE +LI + Y + RLDG N+RQ+ +D + S + VF
Sbjct: 2035 KADGHRVLIFSQMVRCLDILEDYLIYRKYPYERLDGRIRGNMRQAAIDRYCKPDSDRFVF 2094
Query: 588 LISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEE 647
L+ T+AGGLG+NL +A+ V+I+D +WNP DLQAQ R R GQK+ V ++RLL+ + E
Sbjct: 2095 LLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQKKMVKIYRLLTRNTYER 2154
Query: 648 LVYTRQVYK 656
++ + K
Sbjct: 2155 EMFDKASLK 2163
>gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1905
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 188/625 (30%), Positives = 298/625 (47%), Gaps = 102/625 (16%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFG 181
+ V I+ L HQR GV+FLY + +G IL D MGLGKT+ T+ L +
Sbjct: 852 VVVDPFISKHLRPHQRRGVQFLYDCVTGQRHQFGNGCILADQMGLGKTVMTLTTLWTLLK 911
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRD 235
+ + T K +I+ P+ ++ NW+ E RW F ++ N
Sbjct: 912 QSPTGQPTCKK---------AIIVTPAGLVGNWKREIKRWFGAERLKPFTLNDSVSKNTK 962
Query: 236 MILEKLEACGVE-VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+LE V VLI S+D RI SIL ++ +++ DE HRLKN +S+ + +K
Sbjct: 963 QMLEDFNTSTVNPVLIISYDQCRIFSSILCTMSCGVLVCDEGHRLKNMESQTTQSIASIK 1022
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
T+ +I L+GT +QN ++E Y++ D+ PGSLGT F++ Y P+ G+ + E
Sbjct: 1023 TKAKIILSGTPIQNDLIEFYSMVDFCNPGSLGTLSQFKKDYANPIIRGREDSTKEGI--- 1079
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
+ L + ++LRR K + + K +VVFC +S+ QK+ YR +
Sbjct: 1080 --AKAMQLSKITSSFILRR-KSNVLEEYLPTKTIHVVFCRLSEFQKKLYRAV-------- 1128
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCL--VLPCLVKLQQISNHLELIKPNP 472
LDN +G DS L + L+Q+ N+ LIK
Sbjct: 1129 ----------------------LDN-NGVDSIIAGKQNALTTMTTLKQLCNYPSLIK--- 1162
Query: 473 RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
D+ K D+ + D D GKM +E+L+ + S G
Sbjct: 1163 SDDYSKYFTDSNDTTT----PTDF--------------DASQSGKMEFVEQLLITLKSLG 1204
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN--SSPSKQVFLIS 590
D+ +L S + LD+ E L + R+DG + RQ VD FN S+ + VFL+S
Sbjct: 1205 DRAVLVSNYTQTLDVFELLLKKLSIQSYRIDGQVKATERQDRVDKFNDPSNKTHTVFLLS 1264
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
++AGG+GLNL+ AN +V++DP+WNPA D+QA +R +R GQ + V ++RLL+AG++EE ++
Sbjct: 1265 SKAGGVGLNLIGANHIVLYDPDWNPAIDIQAMERVWREGQTKPVSIYRLLTAGTIEEKIH 1324
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGI---------------CNLFRD 695
RQ+ K+ LSN V +K ++E E ++F + C +
Sbjct: 1325 QRQIIKESLSNSVV----DKSHYEKSTFTNEELKDIFSLNDTTQCETHDLLTCKCGIVSG 1380
Query: 696 LSDNLFTSEIIESHEEQGQQQERHH 720
+ L S ++ S E++ Q Q+ H
Sbjct: 1381 STTKLNGSSLVASKEKKEQLQQISH 1405
>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Geomyces destructans 20631-21]
Length = 810
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 296/580 (51%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYKLYKN-----KHGGILGDDMGLGKTIQ 171
+GE P +VP I+ RL + HQ EGVKF+YK +G I+ D+MGLGKT+Q
Sbjct: 203 EGERP--KVPVVIDPRLAKVLRPHQIEGVKFMYKCVTGMIDDRANGCIMADEMGLGKTLQ 260
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
I + + + ++ TI K V+I CPSS++QNW E +W +
Sbjct: 261 CITLMWTLLKQSTDAGKPTIQK---------VIIACPSSLVQNWANELVKWLGKGAIVPF 311
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + ++L + V+I S+++ R++ L +++ DE HR
Sbjct: 312 AIDGKASKEELTQQLRQWAIASGRAVTRPVIIVSYETLRLNVDELKNTQIGLMLCDEGHR 371
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S+ + A L R+ L+GT +QN + E ++L + P LGTR FR+ Y+ P
Sbjct: 372 LKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSLVSFANPDLLGTRLEFRKKYELP 431
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ ++ D+ + L+ V+ K+++RRT + +L + K ++VVFC ++
Sbjct: 432 ILKGRDAAGTDKDRERGDDCLRELLGVVNKFIIRRTNDILSKYLPV-KYEHVVFCGLAPF 490
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y + PEI+ L L G S P L + L
Sbjct: 491 QLDLYNYFITSPEIKAL------------------------LRGKGSQP----LKAIGML 522
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ + D P ++ E D V +A+ DVK G
Sbjct: 523 KKLCNHPDLLNLS-DDLPGCEQYFPE----------DYVPKDARGRD----RDVKPWYSG 567
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM+ L++++ DKI+L S + LDI +K +GY RLDG+ + RQ LV
Sbjct: 568 KMQVLDRMLARIRQDTNDKIVLISNYTQTLDIFDKLCRSRGYGSLRLDGTMNVSKRQKLV 627
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 628 DKFNDPDGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 687
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 688 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 727
>gi|332238364|ref|XP_003268366.1| PREDICTED: DNA repair and recombination protein RAD54B [Nomascus
leucogenys]
Length = 911
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 274/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>gi|119498495|ref|XP_001266005.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181]
gi|119414169|gb|EAW24108.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181]
Length = 1405
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 285/550 (51%), Gaps = 80/550 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K +++
Sbjct: 524 VGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNN------ 577
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R +++ +VL
Sbjct: 578 -------GPFLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNARKQQQQQIRWGNFQVL 630
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLTGTIMQN 308
+T+++ +LS++ W +IVDE HR+KN +SKL + T R R+ LTGT +QN
Sbjct: 631 LTTYEYIIKDRPVLSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQN 690
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ L+ E+ + I + L
Sbjct: 691 NLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI-----RRLH 745
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ R Y+ Q + + + S
Sbjct: 746 KVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQARLYK--------QLVTHNKMVVS 796
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH
Sbjct: 797 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------------- 821
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
VF P D + I ++ GK L++++ + + G ++L+F +
Sbjct: 822 ---PFVFEPVEDQMNPGRGTNDLIW----RTAGKFELLDRILPKFRATGHRVLMFFQMTQ 874
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
+++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGLGLNL +
Sbjct: 875 IMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQT 934
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 935 ADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGK 994
Query: 663 AV-SGKLEKR 671
+ +GK + +
Sbjct: 995 VIQAGKFDNK 1004
>gi|395502487|ref|XP_003755611.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sarcophilus
harrisii]
Length = 1823
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 292/591 (49%), Gaps = 105/591 (17%)
Query: 130 PASI---NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
PA I N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 468 PAYIGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY 527
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE---- 239
G L++ P S + +W+ EF W+ NV +Y G +R+ I E
Sbjct: 528 -------------GPFLVVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWI 574
Query: 240 --KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +
Sbjct: 575 HSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNH 634
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL++L ++ P E + +F D+ HG + +
Sbjct: 635 RLLITGTPLQNSLKELWSLLHFIMPEKF---EFWEDFEDD---HG----------KGREN 678
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
Q L VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 679 GYQSLHKVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSVLQKQYYKWIL---------- 727
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ L L +++L++ NH LIKP +E
Sbjct: 728 ----------------TRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENE-- 769
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+N I LS ++S GK+ L+KL+ +G+++L+
Sbjct: 770 -----------------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 806
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
FS VRMLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGL
Sbjct: 807 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 866
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K
Sbjct: 867 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKK 926
Query: 657 QQLSNIAV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
L ++ + +G+ G + F E FG +LF++L
Sbjct: 927 MVLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 977
>gi|449018816|dbj|BAM82218.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a [Cyanidioschyzon merolae strain
10D]
Length = 1107
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 308/631 (48%), Gaps = 122/631 (19%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P I + +Q EG+ +L +L+++ GIL D+MGLGKT+QTIA LA +
Sbjct: 143 PPGIRGTMRPYQIEGLNWLVRLHQHGINGILADEMGLGKTLQTIALLAFL---------- 192
Query: 190 ILKDNKVDK--KGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRD--------MIL 238
KV K +G L+I P S + NW +EF ++ F V +HG + +I+
Sbjct: 193 -----KVYKGIRGPHLVIAPKSTLGNWNLEFEKFCPDFRVVRFHGDQEERARVAASQLIV 247
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
+ + C +TS++ + ++L + +W +I+DEAHR+KNE S L ++NR
Sbjct: 248 NRFDVC-----VTSYEIAILEKAVLRKFHWRYLIIDEAHRIKNENSVLSQVVRMYNSQNR 302
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P + E F ++ E ++ A +R
Sbjct: 303 LLITGTPLQNNLHELWALLNFLLPDVFSSSEDFDAWF-EQVEGTTEEDAKAEMVR----- 356
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L AVLR +LLRR K E + + K++ +VF ++ +Q YR LL+ K
Sbjct: 357 --QLHAVLRPFLLRRLKSE-VARELPPKKERIVFVRLTKMQHELYRSLLK---------K 404
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
D+ G G D +L L++L++ NH L +
Sbjct: 405 DVDAISGQ---------------GGDRAR---LLNILMQLRKCCNHPYLFE--------- 437
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
V +D G + S K ++RA +G ++L+F
Sbjct: 438 ---------GVEDRTLDPFGEHVVQNSAKLALLDKLLPRLRA----------EGHRVLIF 478
Query: 539 SYSVRMLDILEKFLIR--KGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAGG 595
S RMLDILE + +GY + R+DGST S R+ ++++FN+ S K +FL+STRAGG
Sbjct: 479 SQMTRMLDILEDYCCEQMRGYPYCRIDGSTDSETRERMIEEFNAEGSDKFIFLLSTRAGG 538
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL SA+ V+++D +WNP DLQA DR+ R GQKR V V RL+ ++EE + R +
Sbjct: 539 LGINLASADTVILYDSDWNPQVDLQAMDRAHRIGQKRPVTVLRLICESTVEERILRRALM 598
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEFQGEL-----FGICNLFR---------DLSDNL- 700
K ++ N+ + + R EG + +GE+ FG + FR DL + L
Sbjct: 599 KLKIDNMVIQ---QGRLVEGQKALA--RGEVLDMIRFGADSFFRADAQDFKDEDLDEILQ 653
Query: 701 ----FTSEIIESHEEQGQQQERHHCTNQGFK 727
T E+ ES EE+ +++ +H FK
Sbjct: 654 RAEAKTKEVTESMEEEARKRSQHGLNLMDFK 684
>gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix
jacchus]
Length = 910
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 275/538 (51%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 296 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 355
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 356 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSVFYSVL 407
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
+ S++ + ++ ++I+I DE HRLKN K A + L RI LTGT +QN
Sbjct: 408 VISYEMLLRSLDQIKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRIILTGTPIQND 467
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 468 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 527
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 528 ILRRT-QEIINKYLPPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLL--------- 577
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 578 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 620
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ ++++L S + L+I
Sbjct: 621 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTERVVLVSNYTQTLNI 676
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 677 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 736
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 737 ILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 794
>gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi]
gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi]
Length = 2707
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 271/540 (50%), Gaps = 90/540 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N RL E+Q EGV +L Y NK IL D+MGLGKT+QTI FL V+ D I
Sbjct: 1051 NNRLREYQFEGVNWLLYCYYNKQNCILADEMGLGKTVQTICFLQRVY------DYGI--- 1101
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILE------------ 239
G LI+ P S I NW+ EF W+ N +YHG +R +I +
Sbjct: 1102 -----HGPFLIVVPLSTIHNWQREFETWTDMNTIVYHGSAASRQIIQQTEFYYRPEELKG 1156
Query: 240 -KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK-LYMACLELKTRN 297
K + LIT+F+ +L ++N+++ I+DEAHRLKN K L L L +
Sbjct: 1157 GKRNVVKFDALITTFEMVVSDCDVLKQINYQVCIIDEAHRLKNRNCKLLTSGLLSLTAEH 1216
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTGT +QN I ELY+L +++ P + F E + GQ T ++
Sbjct: 1217 RVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQF------GQCQT---------ED 1261
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ Q L +L+ +LRR KE+ + + KE+ ++ +S+ QK+ YR +L+
Sbjct: 1262 QVQRLQDILKPMMLRRLKED-VEKTLQPKEETIIEIQLSNTQKKYYRAILE--------- 1311
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ +L C ++ +++L++ NH LI
Sbjct: 1312 -----------------RNFSHL--CKGTSVPSLMNAMMELRKCCNHPFLIS-------- 1344
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ ++ + V D + + V+S GK+ + KL+ + G K+L+
Sbjct: 1345 --GAEEQILAEVKAGHPDWSEDDIYQHAL-----VQSSGKLVLIAKLLPKLRTDGHKVLI 1397
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS VR+LDI+E+FL+ + Y+F R+DG+ +LRQS +D F+ S + +FL+ TRAGGL
Sbjct: 1398 FSQMVRVLDIIEEFLVAQNYTFERIDGNVRGDLRQSAIDRFSKKDSDRFIFLLCTRAGGL 1457
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ V+IFD +WNP DLQAQ R R GQ + V V+RL++ + E ++ + K
Sbjct: 1458 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLK 1517
>gi|449541690|gb|EMD32673.1| hypothetical protein CERSUDRAFT_118698 [Ceriporiopsis subvermispora
B]
Length = 1101
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 316/632 (50%), Gaps = 106/632 (16%)
Query: 117 VLSKDGE-YPII--QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTI 173
++ DG+ P + + P+ IN + +Q +G+ ++ L+ N GIL D+MGLGKT+QTI
Sbjct: 177 AMAADGDDQPFVFEESPSFINGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTI 236
Query: 174 AFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN 233
+FL + LK + + G LI+ P S +QNW EF +W++ + ++ +
Sbjct: 237 SFL------------SYLKHYR-NIPGPHLIVVPKSTLQNWSREFEKWTSDSNTVLLTGS 283
Query: 234 RD----MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
R+ +I +L + +VLITS++ I S L + ++E +++DEAHR+KN S L
Sbjct: 284 REERAEIIANRLISQDFDVLITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQI 343
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
+R R+ +TGT +QN + EL+ L +++ P F + G+
Sbjct: 344 VRSFTSRGRLLITGTPLQNSLKELFALLNFICPEIFSDYADLDSFLHKDEAEGE------ 397
Query: 350 RFIRIADERK-----QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYR 404
AD+ K + L +LR +LLRR K + +L+ KE N+ + ++++Q++ YR
Sbjct: 398 -----ADDEKSKKVVEALHKILRPFLLRRVKSDVEKNLLPKKEINI-YVGLAEMQRKWYR 451
Query: 405 RLLQLPEIQCLINKDLPCSCGSPLT-QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISN 463
+L+ KD+ G LT + E RL N+ +++L++++
Sbjct: 452 SVLE---------KDIDAVNG--LTGKKEGKTRLMNM--------------VMQLRKVTC 486
Query: 464 HLELI---KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRA 520
H L +P P D+ V++ GKM
Sbjct: 487 HPYLFDGAEPGPPYTTDEHL-------------------------------VENSGKMVI 515
Query: 521 LEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS 580
L+KL+ S +KG ++L+FS RMLDILE + + +GY + R+DG T + R +D++N
Sbjct: 516 LDKLLQSMKAKGSRVLIFSQMSRMLDILEDYCLFRGYKYCRIDGGTAHDDRIVAIDEYNK 575
Query: 581 SPS-KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRL 639
S K +FL++TRAGGLG+NL +A+ VV++D +WNP DLQA DR+ R GQ + V VFR
Sbjct: 576 PDSDKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRF 635
Query: 640 LSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYFEGVQDCKEFQGE-LFGICNLFRDLS 697
++ GS+EE + R K +L + + G+ + ++ E I N DL
Sbjct: 636 ITEGSVEERMLERAAQKLRLDQLVIQQGRTQSTKAANKEELLEMIAHGAENIVNSNEDLL 695
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGL 729
N EII+ E + Q+ N ++GL
Sbjct: 696 INDHIDEIIQRGEARTQE------LNSKYEGL 721
>gi|367005456|ref|XP_003687460.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
gi|357525764|emb|CCE65026.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
Length = 1075
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 278/550 (50%), Gaps = 84/550 (15%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVF 180
D E+ + P+ ++ L +Q +G+ +L LYK+ GIL D+MGLGKT+QTIAFL +
Sbjct: 108 DVEFQFRESPSYVDGTLRPYQIQGINWLISLYKSGLSGILADEMGLGKTLQTIAFLGYL- 166
Query: 181 GKDESSDSTILKDNKVDKK-GYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD--- 235
++KK G L+I P S + NW E ++W+ N I G +
Sbjct: 167 -------------RYIEKKPGPYLVIAPKSTLNNWLREINKWTPEVNAFILQGDKEERAG 213
Query: 236 MILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT 295
+I +KL C +++++S++ S +++WE +++DEAHR+KNE+S L E K+
Sbjct: 214 LIQKKLVGCDFDIVVSSYEIIIREKSAFRKIDWEYIVIDEAHRIKNEESMLSQVLREFKS 273
Query: 296 RNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIA 355
RNR+ +TGT +QN + EL+ L +++ P + F +++ +
Sbjct: 274 RNRMLITGTPLQNNLHELWALLNFLLPDIFSNAQDFDDWFSNEGSEDDQ----------- 322
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
D+ + L VL+ +LLRR K E L+ KE NV + MS +QK+ Y+++
Sbjct: 323 DKVVKQLHTVLQPFLLRRIKSEVETSLLPKKELNV-YVGMSTMQKKWYKQI--------- 372
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ KD+ S + E RL N+ +++L++ NH L
Sbjct: 373 LEKDIDAVNASSGNK-ESKTRLLNI--------------VMQLRKCCNHPYLF------- 410
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
D + D LV +A+ + L +G ++
Sbjct: 411 ------DGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKFK---------------EEGSRV 449
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS-KQVFLISTRAG 594
L+FS R+LDI+E + + Y++ R+DGST R +DD+N+ S K +FL++TRAG
Sbjct: 450 LIFSQMSRLLDIMEDYCYFRNYNYCRIDGSTAHEDRIQAIDDYNAPDSDKFLFLLTTRAG 509
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL SA+ V++FD +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R
Sbjct: 510 GLGINLTSADVVILFDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKIIERAT 569
Query: 655 YKQQLSNIAV 664
K +L + +
Sbjct: 570 QKLRLDKLVI 579
>gi|310792871|gb|EFQ28332.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1119
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/543 (31%), Positives = 277/543 (51%), Gaps = 90/543 (16%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
PA I ++ ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 175 PAFIKGQMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL---------- 224
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEACG 245
+ + G ++I P S + NW+ EF +W+ NV + G + +I ++L
Sbjct: 225 ---RHIMGITGPHIVIVPKSTLDNWKREFEKWTPEVNVLVLQGAKEERNALINDRLVNED 281
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V ITS++ S L + WE +I+DEAHR+KNE+S L +RNR+ +TGT
Sbjct: 282 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRVFNSRNRLLITGTP 341
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P G E F +++ G+ + D Q L V
Sbjct: 342 LQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----GRE--------QDQDTVVQQLHRV 388
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
LR +LLRR K + L+ KE N ++ MSD+Q + Y+++L+ KD+ G
Sbjct: 389 LRPFLLRRVKSDVEKSLLPKKEVN-LYLGMSDMQVKWYQKILE---------KDIDAVNG 438
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 439 AN-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEHL-- 481
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
V + GKM L+KL+ +G ++L+FS
Sbjct: 482 -----------------------------VYNAGKMVVLDKLLARMQKQGSRVLIFSQMS 512
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
R+LDILE + + + Y + R+DG T R + +D++N S++ +FL++TRAGGLG+NL
Sbjct: 513 RLLDILEDYCVFREYKYCRIDGGTAHEDRIAAIDEYNKPGSEKFIFLLTTRAGGLGINLT 572
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ VV++D +WNP DLQA DR+ R GQ + V+V+R ++ ++EE V R K +L
Sbjct: 573 SADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQ 632
Query: 662 IAV 664
+ +
Sbjct: 633 LVI 635
>gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B isoform 1 [Homo
sapiens]
gi|51316548|sp|Q9Y620.1|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens]
gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens]
gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens]
gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct]
Length = 910
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 274/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>gi|403295789|ref|XP_003938808.1| PREDICTED: DNA repair and recombination protein RAD54B [Saimiri
boliviensis boliviensis]
Length = 910
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 285/559 (50%), Gaps = 51/559 (9%)
Query: 117 VLSKDGEYPIIQVPAS--INCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKT 169
V +K+G P++ V + L HQ+EG+ FLY+ + G IL D+MGLGKT
Sbjct: 276 VFNKNG-LPLVDVVIDPYVVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKT 334
Query: 170 IQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSI 228
+Q I+ + + + ++K LI+ P S++ NW+ EF +W + + I
Sbjct: 335 LQCISLIWTLQCQGPYGGKPVIKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKI 386
Query: 229 YHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYM 288
+ + + +++ VL+ S++ + ++ ++I+I DE HRLKN K
Sbjct: 387 FTVDQEHKVEDFIKSVFYSVLVISYEMLLRSLDQIKDIKFDILICDEGHRLKNSAIKTTT 446
Query: 289 ACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP 348
A + L RI LTGT +QN + E + L D+V PG LG+ +R+ Y+EP+ + +A
Sbjct: 447 ALISLSCDKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSAS 506
Query: 349 ERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ 408
E + + R L + ++LRRT +E I + K +NVVFC LQ YR+LL
Sbjct: 507 EEEKELGERRAAELTCLTGLFILRRT-QEIINKYLPPKIENVVFCRPVALQIELYRKLLN 565
Query: 409 LPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI 468
++ + L ++ P L C+ L+++ NH L+
Sbjct: 566 SQVVRFCLQGLL-----------------------ENSPH---LICIGALKKLCNHPCLL 599
Query: 469 KPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW 528
+ +++ D +++ + + + F K GK++ L KL+
Sbjct: 600 FNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVI 655
Query: 529 AS--KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ- 585
++++L S + L+IL++ R GY+++RLDG TP + RQ +VD FNS S
Sbjct: 656 HELRPTERVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVF 715
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+FL+S++AGG+GLNL+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++
Sbjct: 716 IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTI 775
Query: 646 EELVYTRQVYKQQLSNIAV 664
EE +Y RQ+ KQ L V
Sbjct: 776 EEKIYQRQISKQGLCGAVV 794
>gi|448513927|ref|XP_003867021.1| Isw1 protein [Candida orthopsilosis Co 90-125]
gi|380351359|emb|CCG21583.1| Isw1 protein [Candida orthopsilosis Co 90-125]
Length = 1026
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 305/620 (49%), Gaps = 111/620 (17%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
+ + P +N L +Q +G+ +L LY+N GIL D+MGLGKT+QTI+FL +
Sbjct: 119 FEFTESPGYVNGELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQTISFLGYL---- 174
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN---RDMILE 239
+ K N G L+I P S + NW EF RW NV + G D+I
Sbjct: 175 ----RFMYKIN-----GPHLVIAPKSTLDNWYREFQRWIPDINVLVLQGDKDERSDLIKN 225
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
++ C +V++ S++ + + +WE +++DEAHR+KNE+S L ++NR+
Sbjct: 226 RVMTCDFDVIVASYEIVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRL 285
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY--DEPLKHGQRLTAPERFIRIADE 357
+TGT +QN + EL+ L +++ P + F E++ DE + + +
Sbjct: 286 LITGTPLQNNLRELWALLNFILPDVFADNDSFDEWFQKDETSEEDGEVIS---------- 335
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
L VL+ +LLRR K + L+ KE N ++ M+ +QK Y+++L+
Sbjct: 336 ---QLHKVLKPFLLRRIKADVEKSLLPKKELN-IYTKMTTMQKNLYQKILE--------- 382
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL---IKPNPRD 474
KD+ G+ + E RL N+ +++L++ NH L ++P P
Sbjct: 383 KDIDAVNGA--NKKESKTRLLNI--------------VMQLRKCCNHPYLFDGVEPGP-- 424
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
+ D LV NAQ KM L+KL+ + ++G +
Sbjct: 425 --------------PYTTDEHLV-YNAQ--------------KMIILDKLLKKFKAEGSR 455
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
+L+FS RMLDILE + + Y + R+DG T R + +D++N S++ VFL++TRA
Sbjct: 456 VLIFSQMSRMLDILEDYCYFREYPYCRIDGQTEHADRINAIDEYNKPGSEKFVFLLTTRA 515
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GGLG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 516 GGLGINLTTADVVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERA 575
Query: 654 VYKQQLSNIAV-SGKLEKRYFEGVQDCKEF-QGEL-----FGICNLFRDLSD-------- 698
K +L + + G+ +G Q K + EL FG ++F+ D
Sbjct: 576 AQKLRLDQLVIQQGRNNTVGLDGQQSGKAASKNELLDMIQFGAADVFKKGQDQDQEQGGE 635
Query: 699 ---NLFTSEIIESHEEQGQQ 715
+L E+++ EE+ Q+
Sbjct: 636 QGQDLDIDELLKHSEEKTQE 655
>gi|238503544|ref|XP_002383005.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357]
gi|220690476|gb|EED46825.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357]
Length = 1095
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/561 (32%), Positives = 289/561 (51%), Gaps = 86/561 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E P I V + L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 268 EQPTILVGGT----LKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEK 323
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE 239
+++ G L+I P S + NW +EF +W+ + +Y GP R +
Sbjct: 324 KKNN-------------GPFLVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNARKQQQQ 370
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNR 298
++ +VL+T+++ ILS+V W +IVDE HR+KN +SKL + T R R
Sbjct: 371 QIRWGNFQVLLTTYEYIIKDRPILSKVKWNHMIVDEGHRMKNTQSKLSSTLSQYYTSRYR 430
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIR 353
+ LTGT +QN + EL+ L ++V P + + F E+++ P + GQ L+ E+ +
Sbjct: 431 LILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLV 490
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
I + L VLR +LLRR K++ L K++ V+ C S LQ + Y+ Q
Sbjct: 491 I-----RRLHKVLRPFLLRRLKKDVEKDL-PDKQERVIKCRFSALQAKLYK--------Q 536
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
+ + + S G + L N+ L++L+++ NH
Sbjct: 537 LVTHNKMAVSDGK--GGKTGMRGLSNM--------------LMQLRKLCNH--------- 571
Query: 474 DEPDKQRKDAELASAVFGPDIDLVG-GNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG 532
VF P D + G N+ ++ GK L++++ + + G
Sbjct: 572 -------------PFVFEPVEDQMNPGRGTNDLLW-----RTSGKFELLDRILPKFRATG 613
Query: 533 DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLIST 591
++L+F ++++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+ST
Sbjct: 614 HRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAENSEYFCFLLST 673
Query: 592 RAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYT 651
RAGGLGLNL SA+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE +
Sbjct: 674 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILE 733
Query: 652 RQVYKQQLSNIAV-SGKLEKR 671
R +K + + +GK + +
Sbjct: 734 RAQFKLDMDGKVIQAGKFDNK 754
>gi|426360251|ref|XP_004047361.1| PREDICTED: DNA repair and recombination protein RAD54B [Gorilla
gorilla gorilla]
Length = 915
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 274/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 300 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 359
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 360 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 411
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 412 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 471
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 472 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 531
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 532 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 581
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 582 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 624
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 625 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 680
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 681 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 740
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 741 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 798
>gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
Length = 1017
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 305/609 (50%), Gaps = 95/609 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P ++ +L +Q +G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 125 PGYVHGQLRPYQIQGLNWLISLHENNLSGILADEMGLGKTLQTISFLGYL--------RF 176
Query: 190 ILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN---RDMILEKLEACG 245
I N G L+I P S + NW+ EF+RW V + G D+I K+ C
Sbjct: 177 IRGIN-----GPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERADLIKNKVMTCD 231
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+V+I+S++ + L + +W+ +I+DEAHR+KNE+S L ++NR+ +TGT
Sbjct: 232 FDVIISSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 291
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL+ L +++ P E F E++ K E D+ L V
Sbjct: 292 LQNNLRELWALLNFIVPDVFAENESFDEWFQ---KDSNNENGGE------DQVVSQLHKV 342
Query: 366 LRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCG 425
L+ +LLRR K + L+ KE N V+ MS +QK Y+++L+ KD+ G
Sbjct: 343 LKPFLLRRIKADVEKSLLPKKELN-VYVKMSPMQKNLYQKILE---------KDIDAVNG 392
Query: 426 SPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKD 482
+ + E RL N+ +++L++ NH E ++P P D+
Sbjct: 393 AN-GKKESKTRLLNI--------------VMQLRKCCNHPYLFEGVEPGPPYTTDEH--- 434
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF N+Q KM L++L+ + +G ++L+FS
Sbjct: 435 -----LVF---------NSQ--------------KMLILDQLLKKFQQEGSRVLIFSQMS 466
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
RMLDILE + + Y + R+DG T + R + +D++N S++ +FL++TRAGGLG+NL
Sbjct: 467 RMLDILEDYCYFREYQYCRIDGQTEHSDRINAIDEYNKPGSEKFIFLLTTRAGGLGINLT 526
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
SA+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R K +L
Sbjct: 527 SADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQ 586
Query: 662 IAVSGKLEKRYFEGVQDCKEF-QGEL-----FGICNLFRDL---SDNLFTSEIIESHEEQ 712
+ + +G Q K + EL FG ++F+ +++ +I++ EE+
Sbjct: 587 LVIQQGRNTGGLDGQQSSKAASKNELLDMIQFGAADMFQKTDGEGESIDIEQILKLSEEK 646
Query: 713 GQQQERHHC 721
Q+ + +
Sbjct: 647 TQELNKKYA 655
>gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 290/587 (49%), Gaps = 89/587 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 155 LRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLG------------YLKHYR- 201
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPN-RDMILEKLEACG-VEVLITS 252
+ G +++ P S + NW EF RW S V + N R + + G +V +TS
Sbjct: 202 NIPGPHMVLVPKSTLHNWMNEFKRWIPSLCAVCLIGDKNARAAFIRDVMMPGEWDVCVTS 261
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 262 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 321
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYLL 371
L+ L +++ P + E F ++D G Q+L + L AVL+ +LL
Sbjct: 322 LWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLV-------------ERLHAVLKPFLL 368
Query: 372 RRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQV 431
RR K E L KE + + + +Q+ Y ++L
Sbjct: 369 RRIKAEVEKSLPPKKEVKI-YLGLGKMQREWYTKIL------------------------ 403
Query: 432 ECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFG 491
K +D L+ +L L++L++ NH L D +
Sbjct: 404 --MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYT 448
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKF 551
D LV + GKM L+KL+ + +G ++L+FS R+LDILE +
Sbjct: 449 TDTHLV---------------YNSGKMVVLDKLLPKFKEQGSRVLIFSQMTRVLDILEDY 493
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFD 610
+ +GY + RLDG TP R++ ++ FNS + SK +F++STRAGGLG+NL +A+ V+++D
Sbjct: 494 CMWRGYEYCRLDGQTPHEQREAAIETFNSPNSSKFIFMLSTRAGGLGINLATADVVILYD 553
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLE 669
+WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 554 SDWNPQVDLQAMDRAHRIGQKKTVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 613
Query: 670 KRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F D+ T E I + E+G+++
Sbjct: 614 DQQSNKLAKDEMLQMIRHGATHVFAS-KDSELTDEDITTILERGERK 659
>gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 840
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 202/707 (28%), Positives = 332/707 (46%), Gaps = 95/707 (13%)
Query: 13 KPCSNFPSNFSQSSSVSQESSNDTLI-----IPRRPPKSSLAQQLQRLGETYNFSLPQQN 67
KP FS + S++ S L+ + RPP + + L E + L +
Sbjct: 101 KPFDQITRRFSLPTMRSKDGSIVPLVPTGASLGTRPPAKIIPRPLHDPMEDHAIVL--YD 158
Query: 68 PETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPII 127
P + E+ E KEK +++ K + H + L ++ + +
Sbjct: 159 PTIDDRETDEERQERLKQEAKEKAEQEAK---EKTAGLYNPHKSLKKLLGETEKDKAKVD 215
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGVKFLY+ + +N++G I+ D+MGLGKT+Q IA +
Sbjct: 216 KVPVVIDPRLSKVLRPHQVEGVKFLYRCTTGMVEENQYGCIMADEMGLGKTLQCIALMWT 275
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNR 234
+ + ++ +I CPSS+++NW E ++W + ++I +
Sbjct: 276 LLKQSPHPGRPTIEK--------CIIACPSSLVKNWANELTKWLGKDTVTPLAIDGKGGK 327
Query: 235 DMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
+LEK+ V+I S+++ R L+ +++ DE HRLKN +S
Sbjct: 328 AELLEKVARWVAARGRNVTQPVMIVSYETLRTLTVYLAGCKIGLLLCDEGHRLKNSESLT 387
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ A L R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ + G+
Sbjct: 388 FQALNSLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSD 447
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + ++ + + L ++ K+++RRT + +L + K + VVFC +SD Q YR
Sbjct: 448 ASDAVKAASEAKLKELGGLVMKFIIRRTNDLLSKYLPV-KYEQVVFCGLSDFQLALYRLF 506
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ PEI+ L L G +S P L + L+++ NH E
Sbjct: 507 ITSPEIKAL------------------------LRGTESQP----LKAINILKKLCNHPE 538
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ D P + L F G + +G+ GK LE+L++
Sbjct: 539 LL-----DLPKDLKGSDHLIPEGFVGAGQQQQGRGAGRN-VGVR-CDWSGKFLVLERLVH 591
Query: 527 S------------------WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
S DKI+L S + LD+ EK L K Y + RLDG+
Sbjct: 592 SVRAGPSVTEPSNRFLHQIHTQTNDKIVLISNYTQTLDLFEKLLRSKKYGYFRLDGTMSI 651
Query: 569 NLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
RQ LVD FN K+ +FL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R
Sbjct: 652 TKRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWR 711
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
GQK+ V+R +S G++EE ++ RQ KQ LS+ V K + +R+F
Sbjct: 712 DGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVDEKEDTERHF 758
>gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480]
gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480]
Length = 960
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 228/744 (30%), Positives = 344/744 (46%), Gaps = 110/744 (14%)
Query: 39 IPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFG 98
+P+ K SL +T N S PQ K P++ S V K +
Sbjct: 215 VPKSGTKISLNDLKDASKKTLNVSAPQSAATNNSFKNPLKNSTVM----PLKPNGELPTP 270
Query: 99 RHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASI-----NCRLLEHQREGVKFLYKLYK 153
RH D T P ++ D P QV + L EHQREGVKFLY+
Sbjct: 271 RH-------DPTLPGAVVMKRPDSVPPGKQVVDVVVDPILGKHLREHQREGVKFLYECVM 323
Query: 154 -----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPS 208
N G IL D+MGLGKT+QTIA + + ++ I V KK LI+CP
Sbjct: 324 GLRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNP-----IYGSQPVIKK--ALIVCPV 376
Query: 209 SVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC-GVEVLITSFDSYR-IHGSILSE 265
++I NW+ EF +W + + ++ + L V+I ++ R + +
Sbjct: 377 TLINNWKKEFKKWLGSDRIGVFVADGKSTRLSDFTMGRSYSVMIIGYERLRSVQEQLTKG 436
Query: 266 VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSL 325
+IV+ DE HRLK ++K A L T R+ L+GT +QN++ E + + D+V P L
Sbjct: 437 SAIDIVVADEGHRLKTVQNKCAQAIQSLNTTRRVILSGTPIQNELSEFFAMVDFVNPALL 496
Query: 326 GTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMG 385
GT + F + ++ P+ ++ AP++ I R + L + ++LRRT + HL
Sbjct: 497 GTFKSFMKEFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLPP- 555
Query: 386 KEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDS 445
K + ++FC + QK YR +L SPL Q
Sbjct: 556 KTEYILFCNPTSAQKNLYRHVL-----------------ASPLFQ--------------- 583
Query: 446 CPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNES 505
+++ + + L I P+ E D + +D +++ + ++ +
Sbjct: 584 --------SVLRNSESALQLITILKKPKLEDDGKGEDTSMSAFI----------SSLPHN 625
Query: 506 FIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDG 564
S GK+R L++L+Y+ +K +K++L S L++L L F RLDG
Sbjct: 626 LHRCLSAGSSGKIRVLDQLLYNLRNKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDG 685
Query: 565 STPSNLRQSLVDDFN-SSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQ 622
STP+ RQ+LVDDFN SSPS FL+S +AGG GLNL+ A+R+V+FD +WNPA DLQA
Sbjct: 686 STPATKRQALVDDFNRSSPSACFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATDLQAM 745
Query: 623 DRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
R R GQKRH ++RLL G +EE ++ RQV K L++ + K +F
Sbjct: 746 ARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMDQKGGIAHFS-------- 797
Query: 683 QGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGF--KGLETHIVSSKD-- 738
Q EL +LFR L S ++HE G Q C QG K +E S +
Sbjct: 798 QEEL---KDLFR-----LDESSQCQTHELLGCQ-----CGGQGVMSKEVENENEPSDEIF 844
Query: 739 SNTLLSTGSKTRKSSDPEMARTSK 762
S++L + +SSD EM+ T K
Sbjct: 845 SDSLSEDEDDSVESSDDEMSDTPK 868
>gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens]
Length = 910
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 274/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>gi|402593631|gb|EJW87558.1| helicase [Wuchereria bancrofti]
Length = 2673
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 271/540 (50%), Gaps = 90/540 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N RL E+Q EGV +L Y NK IL D+MGLGKT+QTI FL V+ D I
Sbjct: 1001 NNRLREYQFEGVNWLLYCYYNKQNCILADEMGLGKTVQTICFLQRVY------DYGI--- 1051
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILE------------ 239
G LI+ P S I NW+ EF W+ N +YHG +R +I +
Sbjct: 1052 -----HGPFLIVVPLSTIHNWQREFETWTDMNTIVYHGSAASRQIIQQTEFYYRPEELKG 1106
Query: 240 -KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK-LYMACLELKTRN 297
K + LIT+F+ +L ++N+++ I+DEAHRLKN K L L L +
Sbjct: 1107 GKRNIVKFDALITTFEMVVSDCDVLKQINYQVCIIDEAHRLKNRNCKLLTSGLLSLTAEH 1166
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ LTGT +QN I ELY+L +++ P + F E + GQ T ++
Sbjct: 1167 RVLLTGTPLQNNIEELYSLLNFLEPEQFYSSSAFLEQF------GQCQT---------ED 1211
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ Q L +L+ +LRR KE+ + + KE+ ++ +S+ QK+ YR +L+
Sbjct: 1212 QVQRLQDILKPMMLRRLKED-VEKTLQPKEETIIEIQLSNTQKKYYRAILE--------- 1261
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ +L C ++ +++L++ NH LI
Sbjct: 1262 -----------------RNFSHL--CKGTSVPSLMNAMMELRKCCNHPFLIS-------- 1294
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+ ++ + V D + + V+S GK+ + KL+ + G K+L+
Sbjct: 1295 --GAEEQILAEVKAGHPDWSEDDIYQHAL-----VQSSGKLVLIAKLLPKLRTDGHKVLI 1347
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS VR+LDI+E+FL+ + Y+F R+DG+ +LRQS +D F+ S + +FL+ TRAGGL
Sbjct: 1348 FSQMVRVLDIIEEFLVAQNYTFERIDGNVRGDLRQSAIDRFSKKDSDRFIFLLCTRAGGL 1407
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL +A+ V+IFD +WNP DLQAQ R R GQ + V V+RL++ + E ++ + K
Sbjct: 1408 GINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLK 1467
>gi|422295061|gb|EKU22360.1| hypothetical protein NGA_0429000 [Nannochloropsis gaditana CCMP526]
Length = 1192
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 320/631 (50%), Gaps = 124/631 (19%)
Query: 121 DGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLA--A 178
+ + + Q P+ + +L +Q EG+ ++ +L N GIL D+MGLGKT+Q+I+ LA A
Sbjct: 251 EAHFLLAQPPSIKHGQLRPYQLEGLNWMIRLQDNGINGILADEMGLGKTLQSISVLAYNA 310
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---R 234
F ++ G LI+ P S + NW EF +W + V +HG
Sbjct: 311 EF---------------LNTTGPHLILVPKSTLSNWCNEFRKWCPSLRVLRFHGSKDERA 355
Query: 235 DMILEKLEACGVE----VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
D+I E+L + G E VL+T+++ + LS+ W+ +I+DEAHRLKNE S+
Sbjct: 356 DLIAERL-SPGTERDWDVLLTTYEICNLEKGALSKFAWQYLIIDEAHRLKNEASQFSQTV 414
Query: 291 LELKTRNRIGLTGTIMQ------------------NKIMELYNLFDWVAPGSLGTREHFR 332
LKT +R+ +TGT +Q N + EL+ L +++ P + + F
Sbjct: 415 RMLKTAHRLLITGTPLQSTRSPTLLPPFFSPSPPQNNLHELWALLNFLLPDVFSSSDQFD 474
Query: 333 EFYDEPLKHGQRLTAPERFIRIAD-ERKQHLVA----VLRKYLLRRTKEETIGHLMMGKE 387
++++ + I D E+KQ L+ +LR ++LRR K + + + K
Sbjct: 475 DWFN---------------LEIDDAEQKQRLITQLHKILRPFMLRRLKAD-VEKSLPKKT 518
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ +VFC M Q+ Y+++L+ +DL GS ++
Sbjct: 519 ETLVFCEMMPTQRDTYKKILE---------RDLSVIAGS-----------------ETAG 552
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
VL +++L++ NH L + V +D +G +
Sbjct: 553 RTAVLNLVMQLRKACNHPYLF------------------TGVEDRTLDPLGDHV------ 588
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTP 567
+K+CGKM L+KL+ KG ++L+F RMLDILE F+ +G+S+ R+DG+T
Sbjct: 589 ----IKNCGKMYLLDKLLKKLKEKGHRVLVFCQMTRMLDILEDFMYMRGHSYCRIDGNTS 644
Query: 568 SNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
R++L+D +N+ + SK FL+STRAGGLG+NL +A+ V+++D +WNP DLQAQDR+
Sbjct: 645 YEERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQADLQAQDRAH 704
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYFEGVQDCKEFQGE 685
R GQKR V ++RL++ G++EE + R K +L + V G+L+ + + + + +
Sbjct: 705 RIGQKRPVNIYRLVTQGTIEEKIVERAQKKLKLDAMVVQQGRLQDK--DKMSKDELLEAL 762
Query: 686 LFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
FG +FR DN T E I+ E+G+++
Sbjct: 763 RFGADVIFRS-KDNNITDEDIDLILERGRKR 792
>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
Length = 817
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 198/633 (31%), Positives = 306/633 (48%), Gaps = 83/633 (13%)
Query: 86 EEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCRLLE---- 139
EE ++E + K + + + H E L +SK D VP I+ RL +
Sbjct: 177 EEPKQESDDNKENKEPATKKRKVHKSLAEILGISKYKDDASKHPNVPVVIDPRLAKILRP 236
Query: 140 HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQ EGVKFLY+ + G I+ D+MGLGKT+Q IA + + + TI K
Sbjct: 237 HQVEGVKFLYRCTSGLIDPKAKGCIMADEMGLGKTLQCIALMWTLLKQSPRGRKTISK-- 294
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV---------SIYHGPNRDMILEKLEACG 245
+I+CPSS+++NW E +W V S+ + D + + A G
Sbjct: 295 -------CIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSVKNSEIGDSLKQWSVASG 347
Query: 246 VEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V LI S+++ R H LS +++ DE HRLKN S + A EL+ R+ L
Sbjct: 348 RNVVRPVLIISYETLRRHVDKLSGTEVGLMLADEGHRLKNGDSLTFNALNELRCERRVIL 407
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E ++L ++ P LGTR FR Y+ + G+ A ++ D++
Sbjct: 408 SGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRRNYENDILRGRDADASDKERESGDKKLNE 467
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L ++ ++++RRT + +L + K ++V+F +S LQ + Y + PEI+ L L
Sbjct: 468 LTTLVSRFIIRRTNDILSKYLPI-KYEHVIFVNLSPLQTKLYNFFITSPEIKKL----LK 522
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
PL + K+L N P L LP + + EL+ P D K+R+
Sbjct: 523 GHGSQPLKAIGLLKKLCN------HPNLLNLP-----EDLDGCQELM---PDDYDYKKRE 568
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSY 540
S GK LE+ +Y + GDKI+L S
Sbjct: 569 VQTWLS----------------------------GKFSILERFLYKLHHETGDKIVLISN 600
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD++E+ K Y RLDG+ N RQ LVD FN K+ +FL+S++AGG G+N
Sbjct: 601 YTQTLDLIERMCRVKRYGNLRLDGTMNINKRQKLVDRFNDPDGKEFIFLLSSKAGGCGIN 660
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+ DP+WNPA D QA R +R GQK+ ++R +S G++EE ++ RQ K L
Sbjct: 661 LIGANRLVLIDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSL 720
Query: 660 SNIAVSGKLE-KRYFEGVQDCKEFQGELFGICN 691
S+ V K++ +R F + FQ E +C+
Sbjct: 721 SSCVVDEKVDVERLFSADNLKQLFQFESNTVCD 753
>gi|361129897|gb|EHL01773.1| putative Chromatin structure-remodeling complex subunit snf21 [Glarea
lozoyensis 74030]
Length = 1375
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 281/534 (52%), Gaps = 79/534 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ L T L
Sbjct: 542 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLL------------TYLI 589
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGP--NRDMILEKLEACGVEVL 249
+ K +KG L+I P S + NW +EF +W+ V I Y GP R ++L +VL
Sbjct: 590 EVK-KQKGPFLVIVPLSTLTNWNLEFDKWAPSIVKIVYKGPPMARKNQQQQLRYGNFQVL 648
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 649 LTTYEYIIKDRPVLSKIKWIHMIIDEGHRMKNASSKLSATLTQYYATRYRLILTGTPLQN 708
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ LT E+ + I R+ H
Sbjct: 709 NLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQILVI---RRLH-- 763
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ R Y++L+ NK
Sbjct: 764 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSSLQTRLYKQLVTH-------NK---LV 812
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH P DE + Q
Sbjct: 813 VGDGKGGKTAARGLSNM--------------IMQLRKLCNH-----PFVFDEVENQMNPL 853
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ DL+ ++ GK L++++ + + G ++L+F
Sbjct: 854 NTSN-------DLLW--------------RTAGKFELLDRVLPKYKATGHRVLMFFQMTA 892
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E +L +G F RLDG+T S+ R L+ FN+ S+ +FL+STRAGGLGLNL +
Sbjct: 893 IMDIMEDYLRYRGIKFMRLDGTTKSDDRSELLKLFNAPDSEYFIFLLSTRAGGLGLNLQT 952
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K
Sbjct: 953 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKFK 1006
>gi|334314376|ref|XP_001365054.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Monodelphis
domestica]
Length = 1975
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 292/591 (49%), Gaps = 105/591 (17%)
Query: 130 PASI---NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
PA I N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 620 PAYIGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLF 679
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE---- 239
G L++ P S + +W+ EF W+ NV +Y G +R+ I E
Sbjct: 680 -------------GPFLVVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWI 726
Query: 240 --KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+ + LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +
Sbjct: 727 HSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNH 786
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL++L ++ P E + +F D+ HG + +
Sbjct: 787 RLLITGTPLQNSLKELWSLLHFIMPEKF---EFWEDFEDD---HG----------KGREN 830
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
Q L VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 831 GYQSLHKVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSVLQKQYYKWIL---------- 879
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
+ L L +++L++ NH LIKP +E
Sbjct: 880 ----------------TRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENE-- 921
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
+N I LS ++S GK+ L+KL+ +G+++L+
Sbjct: 922 -----------------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLI 958
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGL 596
FS VRMLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGL
Sbjct: 959 FSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGL 1018
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K
Sbjct: 1019 GINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKK 1078
Query: 657 QQLSNIAV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
L ++ + +G+ G + F E FG +LF++L
Sbjct: 1079 MVLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 1129
>gi|156846474|ref|XP_001646124.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156116797|gb|EDO18266.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 1385
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 284/547 (51%), Gaps = 72/547 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQ+I+ + ++ + +
Sbjct: 501 VGGTLKEYQIKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKET------ 554
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PNRDMILE-KLEACGVEVL 249
G L+I P S I NW +EF +W+ + IY G PN+ +L+ ++ + +VL
Sbjct: 555 -------GPFLVIVPLSTITNWTLEFEKWAPSLTTIIYKGTPNQRKVLQNQIRSGKFDVL 607
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ S+LS+ +W +I+DE HR+KN +SKL Y +TRNR+ LTGT +QN
Sbjct: 608 LTTYEYIIKDRSLLSKYDWAHMIIDEGHRMKNAQSKLSYTIQHYYRTRNRLILTGTPLQN 667
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQRLTAPERFIRIADERKQHLVAVL 366
+ EL+ L ++V P + + F E+++ P + GQ + R+ H VL
Sbjct: 668 NLPELWALLNFVLPKIFNSAKTFDEWFNTPFANTGGQEKLELTEEEALLIIRRLH--KVL 725
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
R +LLRR K+E + + K + VV C +S LQ + Y+++L + L G+
Sbjct: 726 RPFLLRRLKKE-VEKDLPDKIEKVVKCKLSGLQHQLYQQMLN--------HNALFVGAGT 776
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
K L+N +++L++I NH
Sbjct: 777 EGATKGGIKGLNN--------------KIMQLRKICNH---------------------- 800
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF +V N + + + GK L++++ + + G ++L+F +++D
Sbjct: 801 PFVFDEVEGVVNPTRGNSTLL----YRVSGKFELLDRVLPKFKASGHRVLIFFQMTQVMD 856
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL + + RLDG+T + R ++ FN+ S FL+STRAGGLGLNL +A+
Sbjct: 857 IMEDFLRMRDLKYMRLDGATKAEDRTDMLKVFNAPNSDYFCFLLSTRAGGLGLNLQTADT 916
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 917 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 976
Query: 665 SGKLEKR 671
+GK + +
Sbjct: 977 AGKFDNK 983
>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
gloeosporioides Nara gc5]
Length = 806
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 334/689 (48%), Gaps = 106/689 (15%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKS--------SLAQQLQRLGETYNFSLPQQNPETRRE 73
F ++ S+ + N P RPP + +A+ L + FS+ +P
Sbjct: 104 FRKAFSIPLINKNSAAFNPNRPPPTLGLRTGAVFVAKPLH--DPSGEFSIVLYDPTVD-- 159
Query: 74 KAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSK--DGEYPIIQVPA 131
+K V + +E+++E E EK + H E L + K +GE+P +VP
Sbjct: 160 ----DKPKVPEKKEEQREPEPEKIDAPLV------HKSLSEILGIKKKVEGEHP--RVPV 207
Query: 132 SINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
I+ RL + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I L + +
Sbjct: 208 VIDPRLAKVLRPHQIEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQ 267
Query: 183 D-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMI 237
++ STI K ++ CPSS+++NW E +W + +I +++ +
Sbjct: 268 SPDAGKSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEEL 318
Query: 238 LEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA 289
+L + V+I S+++ R++ L +++ DE HRLKN S+ + A
Sbjct: 319 TRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSA 378
Query: 290 CLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPE 349
L R+ L+GT +QN + E + L + P LG+R FR+ ++ P+ G+ A E
Sbjct: 379 LNNLNVTRRVILSGTPIQNDLSEYFALISFANPDLLGSRLEFRKRFELPILRGRDADASE 438
Query: 350 RFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQL 409
+ DE L+ ++ K+++RRT + +L + K ++VVFC ++ Q Y +
Sbjct: 439 ADRKKGDECLSELLGIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFITS 497
Query: 410 PEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIK 469
P IQ L L G S P L + L+++ NH +L+
Sbjct: 498 PSIQAL------------------------LRGKGSQP----LKAINILKKLCNHPDLLN 529
Query: 470 PNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYS 527
D P + E D V A+ D+K GKM+ L++++
Sbjct: 530 LG-DDLPGSENCYPE----------DYVPKEARGRD----RDIKPWYSGKMQVLDRMLAR 574
Query: 528 W-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ- 585
DKI+L S LD+ EK + Y RLDG+ N RQ LVD FN+ ++
Sbjct: 575 IRQDTNDKIVLISNYTSTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPEGEEF 634
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++
Sbjct: 635 VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTI 694
Query: 646 EELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 695 EEKIFQRQSHKQSLSSCVVDSAEDVERHF 723
>gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus]
Length = 755
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 282/545 (51%), Gaps = 68/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 161 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEID 220
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 221 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 271
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L TR R+ +
Sbjct: 272 ARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTRRRVLI 331
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT + F++ ++ P+ + A E ++ +ER +
Sbjct: 332 SGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQLGEERLRE 391
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L V+ + L+RRT + + + K + VV C ++ LQ Y+R L+
Sbjct: 392 LTGVVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQ------------ 438
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
P ++ K + + L+++ NH LI +E D
Sbjct: 439 ---AKPAEELHEGKMSVSSLSSIT-----------SLKKLCNHPALIYDKCVEEED---- 480
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFSY 540
E A +F P G N++ + + GKM L+ ++ S+ DK++L S
Sbjct: 481 GFEGALDIFPP-----GYNSKA------IEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 529
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ EK + Y + RLDG+ R +V+ FNS S VF++S++AGG GLN
Sbjct: 530 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLN 589
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+ L
Sbjct: 590 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 649
Query: 660 SNIAV 664
S+ V
Sbjct: 650 SSCVV 654
>gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis]
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]
Length = 895
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 278/551 (50%), Gaps = 53/551 (9%)
Query: 125 PIIQVPAS--INCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLA 177
PI+ V + L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ +
Sbjct: 265 PIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMGLGKTLQCISLIW 324
Query: 178 AVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM 236
+ + ++K LI+ P S+++NW EF +W T + ++
Sbjct: 325 TLLRQGPYGAKPVIK--------RALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQDHK 376
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
+ E + + VLI S++ + +++++VI DE HRLKN K + L
Sbjct: 377 VEEFVNSPLYSVLIISYEMLLRCLEQIESLDFDLVICDEGHRLKNTSIKTTTSLTSLTCS 436
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
RI L+GT +QN + E + L ++V P LG+ +R+ ++EP+ + TA + +
Sbjct: 437 KRIILSGTPVQNDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIVRSREPTATPEEKNLGE 496
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ-CL 415
ER L + ++LRRT +E I + K +N+VFC S Q YRRLL ++ CL
Sbjct: 497 ERAAELARLTGLFILRRT-QEVINKFLPPKIENIVFCQPSQFQLDLYRRLLNSRAVKSCL 555
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDE 475
+ G + C L L C+ PCL+ I+ +
Sbjct: 556 LGN------GENSPHLVCIGALKKL--CNH-------PCLL--------FRTIQEKSTNP 592
Query: 476 PDKQRKDAELASAVFGPDIDLVGGN-AQNESFIGLSDVKSCGKMRALEKLMYSWASKGDK 534
+ E + +F D D G +++ES L K +R L S ++
Sbjct: 593 DQGEHSLYESIAELFPQDYD--GAKISESESGKLLVLSKLLSGIREL--------SPSER 642
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRA 593
++L S+ + L+IL+ ++ GYS +RLDG TP RQ +VD FNS S +FL+S++A
Sbjct: 643 VVLVSHYTQTLNILQALCVQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSSDFIFLLSSKA 702
Query: 594 GGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQ 653
GG+GLNL+ A+ ++++D +WNPA D+QA R +R GQ+R V ++RLL+ GSLEE +Y RQ
Sbjct: 703 GGVGLNLIGASHLILYDIDWNPANDIQAMARVWRDGQRRTVHIYRLLTTGSLEEKIYQRQ 762
Query: 654 VYKQQLSNIAV 664
+ KQ LS V
Sbjct: 763 ISKQGLSGAVV 773
>gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Pongo abelii]
Length = 910
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 273/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E ++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFTKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTYDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>gi|22328039|ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis thaliana]
gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana]
gi|22655364|gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana]
gi|332010436|gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana]
Length = 1090
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 295/577 (51%), Gaps = 71/577 (12%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L HQREG+ +L+ L+ GGILGDDMGLGKT+Q +FLA +F S
Sbjct: 369 LPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLF------HS 422
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGPN---RDMILEKLEAC 244
++K L++ P +++ +W E + ++ Y+G + R+ L +
Sbjct: 423 KLIK--------RALVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHI-LQ 473
Query: 245 GVEVLITSFDSYRIHGSILSEVN------------WEIVIVDEAHRLKNEKSKLYMACLE 292
G +L+T++D R + L + W+ +I+DE H +KN ++ + LE
Sbjct: 474 GKGILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLE 533
Query: 293 LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFI 352
+ + +RI ++GT +QN + EL+ LF++ PG LG + F++ Y+ + G A +R
Sbjct: 534 IPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQ 593
Query: 353 RIADERKQHLVAVLRKYLLRRTKEETIG-----HLMMGKEDNVVFCTMSDLQKRAYRRLL 407
RI ++L ++ + LRR K E G + K++ VV+ ++ Q++ Y
Sbjct: 594 RIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLY---- 649
Query: 408 QLPEIQCLINKDLPCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ +N ++ S GSPL + K++ CD P L+ + + L
Sbjct: 650 -----EAFLNSEIVLSAFDGSPLAALTILKKI-----CDH-------PLLLTKRAAEDVL 692
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM 525
E + E +A +A + + N + F +D SC K+ + L+
Sbjct: 693 EGMDSTLTQE------EAGVAERLAMH----IADNVDTDDFQTKNDSISC-KLSFIMSLL 741
Query: 526 YSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ 585
+ +G ++L+FS + +ML++++ L GYSF R+DG+T + R V++F
Sbjct: 742 ENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP 801
Query: 586 VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSL 645
+FL++++ GGLGL L A+RV++ DP WNP+ D Q+ DR++R GQ + VIV+RL+++ ++
Sbjct: 802 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATV 861
Query: 646 EELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEF 682
EE +Y +QVYK L A K + RYF QD +E
Sbjct: 862 EEKIYRKQVYKGGLFKTATEHKEQIRYF-SQQDLREL 897
>gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 961
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 207/666 (31%), Positives = 321/666 (48%), Gaps = 71/666 (10%)
Query: 19 PSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVE 78
P + S+ SV + + +I RR + + + + + N + P+ R K P++
Sbjct: 199 PISVSRIGSVRKPDATKPAVIGRR---VEVREAEEAVKKVLNVAAPKSIATNSRFKNPLK 255
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+ +V K ++ + ++Q G P + KD + + V + L
Sbjct: 256 EDSVL--PSKPNKEVTPRHDQNQPGAIVMKR-----PESVPKDKQIVDVVVDPLLGKHLR 308
Query: 139 EHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
EHQREGVKFLY+ N G IL D+MGLGKT+QTIA L + ++ I
Sbjct: 309 EHQREGVKFLYECVMGMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNP-----IYGA 363
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE-ACGVEVLIT 251
+ V KK LI+CP ++I+NW+ EF +W + ++ + M L V+I
Sbjct: 364 SPVVKKA--LIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMII 421
Query: 252 SFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
++ R + + +IVI DE HRLK ++K A L T RI L+GT +QN +
Sbjct: 422 GYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDL 481
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + + D+V PG LGT + F + ++ P+ ++ A ++ I + R + L + K++
Sbjct: 482 SEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFI 541
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT + HL K + ++FC + Q YR ++ P Q + + S L
Sbjct: 542 LRRTADILSKHL-PPKTEYILFCNPTPAQANIYRHVIASPIFQSALG-----NSESALQL 595
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
+ K+L C+S P L L L LI P P+ R F
Sbjct: 596 ITILKKL-----CNS-PSLLTLKVLKDENPNCTISSLISTLP---PNLLRH--------F 638
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILE 549
P S GK+R L++L+++ ++ +KI+L S L++L
Sbjct: 639 SP--------------------ASSGKIRVLDQLLHNLHSTTSEKIVLVSNYTSTLNLLA 678
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVV 607
L + RLDGSTP++ RQ LVDDFN S SK FL+S +AGG+GLNL A+R+V
Sbjct: 679 ALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLNLTGASRLV 738
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FD +WNPA D+QA R R GQKRH ++R+L G LEE ++ RQV K LS+ + K
Sbjct: 739 LFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGLSDSVMDQK 798
Query: 668 LEKRYF 673
+F
Sbjct: 799 NSVAHF 804
>gi|226706292|sp|B0R0I6.2|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
Length = 2511
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 262/531 (49%), Gaps = 95/531 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IA L+ +F S
Sbjct: 846 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSP-------- 897
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
+II P S I NWE EFS W+ N +YHG +R MI + C
Sbjct: 898 ------FMIIAPLSTITNWEREFSNWTDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIP 951
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E++W V++DEAHRLKN KL + L+ +++ L
Sbjct: 952 GAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLL 1011
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTR-EHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + E REF D LK +E+ Q
Sbjct: 1012 TGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD--LK--------------TEEQVQ 1055
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ----LPEIQCLI 416
L ++L+ +LRR KE+ +L K++ ++ ++D+QK+ YR +L+ +
Sbjct: 1056 KLQSILKPMMLRRLKEDVEKNL-APKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQ 1114
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
N ++P + + +CC + G + + +S E+ P
Sbjct: 1115 NSNVPNLLNTMMELRKCCNHPYLITGAEE-------------KIVSELREVYDP------ 1155
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
PD L + V+S GK+ L+KL+ + G K+L
Sbjct: 1156 -------------LAPDFHL------------QALVRSAGKLVLLDKLLPRLKAGGHKVL 1190
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGG
Sbjct: 1191 IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 1250
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
LG+NL +A+ VIFD +WNP DLQAQ R R GQ + V V+RL++ S E
Sbjct: 1251 LGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1301
>gi|449471687|ref|XP_002197759.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Taeniopygia
guttata]
Length = 1794
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 290/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 444 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 496
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G L++ P S + +W+ EF W+ NV +Y G +R+MI E + +
Sbjct: 497 ------GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRL 550
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VD+AHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 551 KFNALITTYEILLKDKTVLGSINWAFLGVDQAHRLKNDDSLLYKTLIDFKSNHRLLITGT 610
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 611 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 654
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 655 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWIL----------------- 696
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
+ L L +++L++ NH LIKP P++ ++
Sbjct: 697 ---------TRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKP-----PEENERENG 742
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
L E+ L ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 743 L------------------ETLQSL--IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 782
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 783 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 842
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 843 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 902
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 903 IQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 946
>gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1024
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/584 (30%), Positives = 292/584 (50%), Gaps = 93/584 (15%)
Query: 124 YPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD 183
+ + P ++ +L +Q +G+ +L LY+N GIL D+MGLGKT+QTI+FL +
Sbjct: 120 FEFTESPGYVDGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISFLGYL---- 175
Query: 184 ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN---RDMILE 239
+ N G L+I P S + NW+ EF+RW V + G ++I
Sbjct: 176 ----RYMRGIN-----GPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDKDERAELIKS 226
Query: 240 KLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
K+ C +++I S++ S L + +WE +++DEAHR+KNE+S L ++NR+
Sbjct: 227 KVMQCEFDIIIASYEIVIREKSTLKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRL 286
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK 359
+TGT +QN + EL+ L +++ P E F E++ K Q ++ I
Sbjct: 287 LITGTPLQNNLRELWALLNFILPDVFADNESFDEWFQ---KEDQEEEDQDKVI------- 336
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L VL+ +LLRR K + L+ KE N V+ M+ +QK Y+++L+ KD
Sbjct: 337 SQLHKVLKPFLLRRIKADVEKSLLPKKELN-VYVKMAPMQKNLYKKILE---------KD 386
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEP 476
+ GS + E RL N+ +++L++ NH E ++P P
Sbjct: 387 IDAVNGSN-GKKESKTRLLNI--------------VMQLRKCCNHPYLFEGMEPGPPYTT 431
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
D+ VF N+Q KM L++++ + +G ++L
Sbjct: 432 DEH--------LVF---------NSQ--------------KMLILDQMLKKFQQEGSRVL 460
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS RMLDILE + + Y + R+DG T + R + +D++N S++ VFL++TRAGG
Sbjct: 461 IFSQMSRMLDILEDYCYFREYQYCRIDGQTEHSDRINAIDEYNKPGSEKFVFLLTTRAGG 520
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
LG+NL +A+ V++FD +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 521 LGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEKVLERATQ 580
Query: 656 KQQLSNIAVSGKLEKRYFEGVQDCKEF-QGEL-----FGICNLF 693
K +L + + +G Q K + EL FG ++F
Sbjct: 581 KLRLDQLVIQQGRNTGGLDGQQSSKAASKNELLDLIQFGAADMF 624
>gi|121712712|ref|XP_001273967.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1]
gi|119402120|gb|EAW12541.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1]
Length = 1379
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 287/551 (52%), Gaps = 82/551 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q G++++ LY N GIL D+MGLGKTIQTI+ + + K +++
Sbjct: 528 VGGKLKEYQIRGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIEKKKNN------ 581
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R +++ +VL
Sbjct: 582 -------GPFLVIVPLSTLTNWNLEFDKWAPSVSKVVYKGPPNARKQQQQQIRWGNFQVL 634
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLTGTIMQN 308
+T+++ ILS++ W +IVDE HR+KN +SKL + T R R+ LTGT +QN
Sbjct: 635 LTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQN 694
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ L+ E+ + I + L
Sbjct: 695 NLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI-----RRLH 749
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q + + + S
Sbjct: 750 KVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYK--------QLVTHNKMVVS 800
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH
Sbjct: 801 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------------- 825
Query: 484 ELASAVFGPDIDLVG-GNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
VF P D + G A N+ ++ GK L++++ + + G ++L+F
Sbjct: 826 ---PFVFEPVEDQMNPGRATNDLIW-----RTAGKFELLDRILPKFRATGHRVLMFFQMT 877
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLV 601
++++I+E FL +G + RLDGST S+ R L+ FN+ S FL+STRAGGLGLNL
Sbjct: 878 QIMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPGSDYFCFLLSTRAGGLGLNLQ 937
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 938 TADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDG 997
Query: 662 IAV-SGKLEKR 671
+ +GK + +
Sbjct: 998 KVIQAGKFDNK 1008
>gi|396466336|ref|XP_003837669.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
gi|312214231|emb|CBX94225.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
Length = 938
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 268/550 (48%), Gaps = 67/550 (12%)
Query: 137 LLEHQREGVKFLYKLYKN----KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L +HQREGVKFLY+ G I+ D+MGLGKT+QTIA + T+LK
Sbjct: 292 LRDHQREGVKFLYECVMGMRCEGEGAIMADEMGLGKTLQTIALIW-----------TLLK 340
Query: 193 DNKVDKKGYV----LIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVE 247
N + V LI+CP+ ++ NW+ EF +W + ++ + +
Sbjct: 341 QNPIHGSSPVVNKALIVCPAGLVDNWKREFRKWLGNERIGLFSCHKDRKVTDFTMGKAYN 400
Query: 248 VLITSFDSYRIHGSILSEVNW-EIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
V+I ++ R+ L + +IVI DE HRLK +K +A L T R+ L+GT +
Sbjct: 401 VMIVGYEMLRVVQEDLKKAGGIDIVIADEGHRLKTANNKAMLAIQSLSTERRVILSGTPL 460
Query: 307 QNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVL 366
QN + E Y D+V PG LG R F+ ++ P+ ++ A E + + R + LV++
Sbjct: 461 QNDLGEFYTAIDFVNPGLLGQRSAFKRTFEAPIMRSRQPDATESELEKGEARWKELVSLT 520
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
++++RRT + + K +++VFC + Q AYR +L P +
Sbjct: 521 SQFMIRRT-ANVLAKYLPPKTEHIVFCKPTRAQAEAYRNILTSPIFSAALGN-------- 571
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
N D + L + L+++ N L+K + ++ +
Sbjct: 572 -----------GNSD--------MALQLINVLKKVCNSPSLLKSSTDND--------DTP 604
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-KILLFSYSVRML 545
SA+ + L+ N S S K+R L+ L++ + D KI++ S L
Sbjct: 605 SALLQTLLPLIPPQILNSS-------ASSTKLRLLDSLVHRIHTTTDEKIVIVSNYTTTL 657
Query: 546 DILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSA 603
D++E+ L Y++ RLDGSTP+ RQ LV+ FN+S FL+S ++GG+G+NL+ A
Sbjct: 658 DMIERLLTSLSYTYLRLDGSTPAAKRQPLVNKFNTSSKSTAFAFLLSAKSGGVGINLIGA 717
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+R+V+F+ +WNPA DLQA R R GQK ++R L G L+E +Y RQV K L+
Sbjct: 718 SRIVLFECDWNPATDLQAMARIHREGQKLPCKIYRFLIKGGLDEKIYQRQVSKMGLAGAV 777
Query: 664 VSGKLEKRYF 673
V K F
Sbjct: 778 VDNKASASSF 787
>gi|225431683|ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
gi|296088517|emb|CBI37508.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 189/650 (29%), Positives = 316/650 (48%), Gaps = 88/650 (13%)
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G ++P I L HQR+G+K+L+ L+ GGILGDDMGLGKT+Q FLA +F
Sbjct: 315 GPRSTYKLPGKIAKMLYPHQRDGLKWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLF- 373
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP---NRDMI 237
S +L+ +++ P +++ +W E S + Y+G R
Sbjct: 374 -----HSCLLR--------RAVVVAPKTLLSHWIKELSAVGLSEKTREYYGTCTKTRQYE 420
Query: 238 LEK-LEACGVEVLITSFDSYRIHGSIL------------SEVNWEIVIVDEAHRLKNEKS 284
L+ L+ GV L+T++D R + L + W+ +I+DE H +KN +
Sbjct: 421 LQYVLQDKGV--LLTTYDIVRNNSKSLCGGNYFHDKRSEDDFTWDYMILDEGHLIKNPST 478
Query: 285 KLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQR 344
+ + +E+ +RI ++GT +QN + EL+ LF + P LG + F+ Y+ P+ G
Sbjct: 479 QRAKSLMEIPCAHRIVVSGTPIQNNLKELWALFSFCCPELLGDKNWFKVKYESPILRGND 538
Query: 345 LTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGH-------LMMGKEDNVVFCTMSD 397
A +R I+ + L ++ Y LRR K E + K + +V+ ++
Sbjct: 539 KNASDREKHISSRVAKELRERIQPYFLRRLKNEVFHEDDASETAKLSKKNEIIVWLRLTS 598
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSC--GSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
Q++ Y + +N ++ S GSPL + K++ CD P L
Sbjct: 599 CQRQLY---------EAFLNSEIVLSAFDGSPLAAITILKKI-----CDH-------PLL 637
Query: 456 VKLQQISNHLELIKP--NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
+ + + + LE + N D + LA+A + + F+ +D
Sbjct: 638 LTKRAVEDVLEGMDSMLNQEDLGMASKLAMHLATAY------------ERDDFLEKNDNV 685
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQS 573
S KM + L+ + +G +L+FS + +ML+++E+ LI GY F R+DG+T +N R
Sbjct: 686 SS-KMSFILALLDTLIPEGHNVLIFSQTRKMLNLIEELLISNGYKFLRIDGTTKANDRVK 744
Query: 574 LVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
+V+DF +FL++++ GGLGL L A+RV++ DP WNP+ D Q+ DR++R GQ +
Sbjct: 745 IVNDFQDGVGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKD 804
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLF 693
VIV+RL++ G++EE +Y +Q++K L A K + RYF QD + ELF +
Sbjct: 805 VIVYRLMTCGTIEEKIYRKQIFKGGLFRTATEHKEQTRYF-SQQDLQ----ELFSLPKHG 859
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIVSSKDSNTLL 743
D+S T + + HEE Q + K LET ++ + LL
Sbjct: 860 FDVS---VTQQQL--HEEHDHQHNMDESLKEHIKFLETQGIAGVSHHNLL 904
>gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio]
Length = 2549
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 262/531 (49%), Gaps = 95/531 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IA L+ +F S
Sbjct: 884 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSP-------- 935
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
+II P S I NWE EFS W+ N +YHG +R MI + C
Sbjct: 936 ------FMIIAPLSTITNWEREFSNWTDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIP 989
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E++W V++DEAHRLKN KL + L+ +++ L
Sbjct: 990 GAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLL 1049
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTR-EHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + E REF D LK +E+ Q
Sbjct: 1050 TGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD--LK--------------TEEQVQ 1093
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ----LPEIQCLI 416
L ++L+ +LRR KE+ +L K++ ++ ++D+QK+ YR +L+ +
Sbjct: 1094 KLQSILKPMMLRRLKEDVEKNL-APKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQ 1152
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
N ++P + + +CC + G + + +S E+ P
Sbjct: 1153 NSNVPNLLNTMMELRKCCNHPYLITGAEE-------------KIVSELREVYDP------ 1193
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
PD L + V+S GK+ L+KL+ + G K+L
Sbjct: 1194 -------------LAPDFHL------------QALVRSAGKLVLLDKLLPRLKAGGHKVL 1228
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGG
Sbjct: 1229 IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 1288
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
LG+NL +A+ VIFD +WNP DLQAQ R R GQ + V V+RL++ S E
Sbjct: 1289 LGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1339
>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
impatiens]
Length = 748
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 280/548 (51%), Gaps = 63/548 (11%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ K +G I+ D+MGLGKT+Q I L + + +
Sbjct: 151 CNILRPHQREGVKFMYECVTGKRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 210
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA--- 243
I K +I+ PSS+++NW E +W V G N+ I KL
Sbjct: 211 LIEK---------AIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKTDIDTKLTGFMK 261
Query: 244 -----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y A + LK + R
Sbjct: 262 TYGRRCINPILIISYETFRLHAQVLHQDEVGLVLCDEGHRLKNSENQTYQALINLKAKRR 321
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT + FR+ ++ P+ GQ A + ++A ER
Sbjct: 322 VLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTERKLAQER 381
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
LV+++ K L+RRT +L + K + VV M LQ Y +Q ++ + +
Sbjct: 382 LAELVSIVNKCLIRRTSALLSKYLPL-KYELVVCIRMGKLQTDLYNSFIQSDSVRKSMEE 440
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ S K+ + L + L+++ H +L+ ++ D
Sbjct: 441 NSANS-----------KKGKSFS---------TLAAITLLKKLCCHPDLVYDKILEKSDG 480
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILL 537
A+L + + E LS GK+ L+ L+ S + DKI+L
Sbjct: 481 FENAAKLMPPNY----------STKEIMPELS-----GKLMVLDCLLASIKTTTNDKIVL 525
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK ++ Y++ RLDG+ R +V+ FN S +F++S++AGG
Sbjct: 526 VSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFMLSSKAGGC 585
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++R L G++EE ++ RQ +K
Sbjct: 586 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEKIFQRQAHK 645
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 646 KALSSTVV 653
>gi|115438260|ref|XP_001218021.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Aspergillus terreus NIH2624]
gi|114188836|gb|EAU30536.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Aspergillus terreus NIH2624]
Length = 1418
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 283/550 (51%), Gaps = 80/550 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQTI+ + + K +++
Sbjct: 538 VGGTLKEYQIRGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYIIEKKKNN------ 591
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + +Y GP R +++ +VL
Sbjct: 592 -------GPFLVIVPLSTLTNWNLEFEKWAPAVSRVVYKGPPNARKQQQQQIRWGNFQVL 644
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIGLTGTIMQN 308
+T+++ +LS+V W +IVDE HR+KN +SKL + T R R+ LTGT +QN
Sbjct: 645 LTTYEYIIKDRPVLSKVKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGTPLQN 704
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ L+ E+ + I + L
Sbjct: 705 NLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMELSEEEQLLVI-----RRLH 759
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ + YR Q + + + S
Sbjct: 760 KVLRPFLLRRLKKD-VEKDLPDKQERVIKCRFSALQAKLYR--------QLMTHNKMVVS 810
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH
Sbjct: 811 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH------------------- 835
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
VF P D + + ++ GK L++++ + + G ++L+F +
Sbjct: 836 ---PFVFEPVEDQMNPTRATNDLLW----RTAGKFELLDRILPKFRATGHRVLMFFQMTQ 888
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
+++I+E FL +G + RLDGST S+ R L+ FN+ S+ FL+STRAGGLGLNL S
Sbjct: 889 IMNIMEDFLRLRGLKYLRLDGSTKSDDRSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQS 948
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+IFD +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R +K +
Sbjct: 949 ADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSIEEKILERAQFKLDMDGK 1008
Query: 663 AV-SGKLEKR 671
+ +GK + +
Sbjct: 1009 VIQAGKFDNK 1018
>gi|378755038|gb|EHY65065.1| chromatin structure-remodeling complex subunit snf21 [Nematocida
sp. 1 ERTm2]
Length = 992
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 285/576 (49%), Gaps = 89/576 (15%)
Query: 106 QFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL-EHQREGVKFLYKLYKNKHGGILGDDM 164
Q D+ FE SK+ I + P S++ LL E+Q +GV+++ LY N GIL D+M
Sbjct: 294 QEDNMDYFEAAHSSKE---LIKEQPRSVSYGLLREYQLKGVEWMVSLYNNNLNGILADEM 350
Query: 165 GLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-T 223
GLGKT+Q I F+ + K + +D L+I P S NW+ EFSRW+ +
Sbjct: 351 GLGKTVQAIVFICYILEKKQETDP-------------FLVIVPLSTFSNWQSEFSRWAPS 397
Query: 224 FNVSIYHG-PNRDMILEKLEACG-VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKN 281
V Y G P L+K + G +VL+T+F+ + LS+ NW IVDE HR+KN
Sbjct: 398 IRVLSYKGDPTHRKDLKKETSEGKYDVLLTTFEYIIKDKNFLSKTNWLYTIVDEGHRMKN 457
Query: 282 EKSKLYMACLEL----KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
S+L C+ + K+R R+ LTGT +QN + EL++L ++V P + F E+++
Sbjct: 458 SGSRL---CVVMNTYYKSRYRLLLTGTPLQNSLPELWSLLNFVLPKIFCSGGSFDEWFNA 514
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
PL H + ++ H VLR +LLRR K++ L K + ++ C MS
Sbjct: 515 PLMHVGEKIELNEEEELLIIKRLH--KVLRPFLLRRLKKDVEAGL-PDKVETIIKCGMSH 571
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
LQ+ Y + + L + + K+L+N +++
Sbjct: 572 LQRSLYNEV-----------------RSTTLKKNDSVKKLNN--------------TIMQ 600
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGK 517
L++I NH VF D V N + K GK
Sbjct: 601 LRKICNH----------------------PFVFDAVEDFVNPLKINNELL----YKVSGK 634
Query: 518 MRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDD 577
L +++Y + G K+L+F +++ I+E L+ +G+ + RLDG+ S R SL+
Sbjct: 635 FELLRRMLYKLRATGHKVLMFFQMTQIMTIMEDMLVMEGFKYLRLDGAVKSEERASLISS 694
Query: 578 FNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 636
FN S VFL+STRAGGLGLNL A+ V+IFD +WNP D QAQDR+ R GQ + V +
Sbjct: 695 FNDPTSGYPVFLLSTRAGGLGLNLQIADTVIIFDSDWNPHADQQAQDRAHRIGQTKEVRI 754
Query: 637 FRLLSAGSLEELVYTRQVYKQQL-SNIAVSGKLEKR 671
+RL++A ++EE + + +K + I +G+ + R
Sbjct: 755 YRLITADTVEEYILEKANHKLHVDEKIIQAGRFDNR 790
>gi|347835078|emb|CCD49650.1| similar to SNF2-family ATP dependent chromatin remodeling factor
snf21 [Botryotinia fuckeliana]
Length = 1419
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 283/558 (50%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ L + + K
Sbjct: 538 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLLTYLI--------EVKK 589
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
N G L+I P S + NW +EF +W+ +Y GP R L +VL
Sbjct: 590 QN-----GPFLVIVPLSTLTNWTLEFEKWAPAIGKIVYKGPPNTRKQQQNHLRYGNFQVL 644
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN +SKL + TR R+ LTGT +QN
Sbjct: 645 LTTYEYIIKDRPILSKIKWVHMIIDEGHRMKNSQSKLSATLTQYYTTRYRLILTGTPLQN 704
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ LT E+ + I R+ H
Sbjct: 705 NLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQILVI---RRLH-- 759
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ R Y+ Q + + L S
Sbjct: 760 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQARLYK--------QMVTHNKLVVS 810
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH + +
Sbjct: 811 DGK--GGKTGARGLSNM--------------IMQLRKLCNHPFVFRE------------- 841
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
V +I S +S GK L++++ + + G ++L+F
Sbjct: 842 -------------VEDQMNPTGYINDSLWRSAGKFELLDRILPKYQATGHRVLMFFQMTA 888
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
++DI+ +FL +G F RLDG+T S+ R L+ +FN+ S+ FL+STRAGGLGLNL +
Sbjct: 889 IMDIMGEFLDYRGIKFMRLDGTTKSDDRSLLLKEFNAPNSEYFCFLLSTRAGGLGLNLQT 948
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 949 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKFKLDMDGK 1008
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1009 VIQAGRFDNKSSETDRDA 1026
>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
Length = 805
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 292/580 (50%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
DGE+P +VP I+ +L + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q
Sbjct: 198 DGEHP--RVPVVIDPKLAKILRPHQVEGVKFMYRCVTGLIDEKANGCIMADEMGLGKTLQ 255
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV---- 226
I+ + + + ++ TI K +++CP+S+++NW E +W N
Sbjct: 256 CISLMWTLLKQSPDAGKPTIQK---------AIVVCPASLVKNWANELVKWLGPNAINPF 306
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L + V+I S+++ R++ L ++ DE HR
Sbjct: 307 AIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHR 366
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S + A L R+ LTGT +QN + E ++L + P LGTR FR+ Y+ P
Sbjct: 367 LKNSDSNTFNALNSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIP 426
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L+ V+ K+L+RRT + +L + K ++VVFC ++
Sbjct: 427 ILRGRDADASEEDRKKGDECTAALLNVVNKFLIRRTNDILSKYLPV-KYEHVVFCNLAPF 485
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y ++ P+IQ L L G S P L + L
Sbjct: 486 QFDLYNYFIKSPDIQAL------------------------LRGKGSQP----LKAINIL 517
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ +A + G + ES ++KS G
Sbjct: 518 KKLCNHPDLL---------------NMADDLPGSEQCFPDDYVPKESRGRDREIKSWYSG 562
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM L++++ DKI+L S LD+ E+ + Y RLDG+ N RQ LV
Sbjct: 563 KMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFERMCRSRQYGCLRLDGTMNVNKRQKLV 622
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN + VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 623 DRFNDPEGDEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 682
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 683 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 722
>gi|114620949|ref|XP_001142757.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Pan troglodytes]
gi|410225608|gb|JAA10023.1| RAD54 homolog B [Pan troglodytes]
gi|410256892|gb|JAA16413.1| RAD54 homolog B [Pan troglodytes]
gi|410338389|gb|JAA38141.1| RAD54 homolog B [Pan troglodytes]
Length = 910
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 273/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLYKNKH-----GGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGSCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio
anubis]
Length = 908
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 274/544 (50%), Gaps = 61/544 (11%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NV+FC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL----IKPNPRDEPDKQRKDAEL 485
++ P L C+ L+++ NH L IK DK + +
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLY 619
Query: 486 AS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYS 541
+VF D + + L K GK++ L KL+ +K++L S
Sbjct: 620 KGLLSVFPADYNPL-----------LFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNY 668
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL
Sbjct: 669 TQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL 728
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L
Sbjct: 729 IGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 788
Query: 661 NIAV 664
V
Sbjct: 789 GAVV 792
>gi|340905259|gb|EGS17627.1| WD40 repeat-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2313
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 291/558 (52%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K +
Sbjct: 1359 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKK-------- 1410
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF +W+ + +Y GP R M EK+ +VL
Sbjct: 1411 -----QNGPYLVIVPLSTLTNWNLEFEKWAPSVTKVVYKGPPNARKMQQEKIRQGKFQVL 1465
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 1466 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYTTRFRLILTGTPLQN 1525
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ + ++V P + + F E+++ P + GQ LT E+ + I + L
Sbjct: 1526 NLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 1580
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ R Y++++ +I +++
Sbjct: 1581 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQARLYKQMVTHQKI--IVSDGKGGK 1637
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G+ + L N+ +++L+++ NH P DE + Q
Sbjct: 1638 TGA--------RGLSNM--------------IMQLRKLCNH-----PFVFDEVENQM--- 1667
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
N QN S L ++ GK L++++ + + G ++L+F
Sbjct: 1668 ----------------NPQNISNDLL--WRTAGKFELLDRILPKYKATGHRVLMFFQMTA 1709
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E +L +G + RLDG+T S R L+ FN+ S +FL+STRAGGLGLNL +
Sbjct: 1710 IMDIMEDYLRYRGLHYLRLDGTTKSEDRSELLKLFNAPDSPYFMFLLSTRAGGLGLNLQT 1769
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R +K +
Sbjct: 1770 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERARFKLDMDGK 1829
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1830 VIQAGRFDNKSSETDRDA 1847
>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
Length = 908
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 274/544 (50%), Gaps = 61/544 (11%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NV+FC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL----IKPNPRDEPDKQRKDAEL 485
++ P L C+ L+++ NH L IK DK + +
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLY 619
Query: 486 AS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYS 541
+VF D + + L K GK++ L KL+ +K++L S
Sbjct: 620 KGLLSVFPADYNPL-----------LFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNY 668
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL
Sbjct: 669 TQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL 728
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L
Sbjct: 729 IGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 788
Query: 661 NIAV 664
V
Sbjct: 789 GAVV 792
>gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Meleagris gallopavo]
Length = 1837
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/587 (30%), Positives = 291/587 (49%), Gaps = 102/587 (17%)
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
S N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 GSENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY---- 536
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KL 241
G L++ P S + +W+ EF W+ NV +Y G +R+MI E +
Sbjct: 537 ---------GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQS 587
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+++ ++L ++W + VDEAHRLKN+ S LY ++ K+ +R+ +
Sbjct: 588 KRLKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLI 647
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL++L ++ P E F E + + ++G Q
Sbjct: 648 TGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QS 691
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 692 LHKVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWIL-------------- 736
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
+ L L +++L++ NH LIKP P++ +
Sbjct: 737 ------------TRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKP-----PEENER 779
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ + E+ L ++S GK+ L+KL+ +G+++L+FS
Sbjct: 780 ENGI------------------ETLQSL--IRSSGKLILLDKLLTRLRDRGNRVLIFSQM 819
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNL 600
VRMLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL
Sbjct: 820 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 879
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SA+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L
Sbjct: 880 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 939
Query: 661 NIAV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
++ + +G+ G + F E FG +LF++L
Sbjct: 940 HLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 986
>gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B isoform 3 [Homo
sapiens]
gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens]
Length = 726
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 272/534 (50%), Gaps = 48/534 (8%)
Query: 140 HQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + ++K
Sbjct: 115 HQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKT 174
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLITSF 253
LI+ P S++ NW+ EF +W + + I+ + E +++ VLI S+
Sbjct: 175 --------LIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISY 226
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
+ + + ++++I DE HRLKN K A + L RI LTGT +QN + E
Sbjct: 227 EMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEF 286
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + ++LRR
Sbjct: 287 FALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRR 346
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
T +E I + K +NVVFC LQ YR+LL ++ + L SP
Sbjct: 347 T-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLE---NSPH----- 397
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
L C+ L+++ NH L+ + +++ D +++
Sbjct: 398 ------------------LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGL 439
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDILEKF 551
+ + + F K GK++ L KL+ +K++L S + L+IL++
Sbjct: 440 LSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEV 495
Query: 552 LIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRVVIFD 610
R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + ++++D
Sbjct: 496 CKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYD 555
Query: 611 PNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 556 IDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 609
>gi|363737795|ref|XP_413879.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Gallus gallus]
Length = 1837
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 293/587 (49%), Gaps = 102/587 (17%)
Query: 131 ASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
S N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 GSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY---- 536
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KL 241
G L++ P S + +W+ EF W+ NV +Y G +R+MI E +
Sbjct: 537 ---------GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQS 587
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+++ ++L ++W + VDEAHRLKN+ S LY ++ K+ +R+ +
Sbjct: 588 KRLKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLI 647
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL++L ++ P E F E + + ++G Q
Sbjct: 648 TGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QS 691
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L
Sbjct: 692 LHKVLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWIL-------------- 736
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
K L + F L +++L++ NH LIKP P++ +
Sbjct: 737 ---------TRNYKALSKGTRGSTSGF---LNIVMELKKCCNHCYLIKP-----PEENER 779
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
+ + E+ L ++S GK+ L+KL+ +G+++L+FS
Sbjct: 780 ENGI------------------ETLQSL--IRSSGKLILLDKLLTRLRDRGNRVLIFSQM 819
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNL 600
VRMLDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL
Sbjct: 820 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 879
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
SA+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L
Sbjct: 880 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 939
Query: 661 NIAV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
++ + +G+ G + F E FG +LF++L
Sbjct: 940 HLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKEL 986
>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Macaca mulatta]
Length = 908
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 274/544 (50%), Gaps = 61/544 (11%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NV+FC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL----IKPNPRDEPDKQRKDAEL 485
++ P L C+ L+++ NH L IK DK + +
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLY 619
Query: 486 AS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYS 541
+VF D + + L K GK++ L KL+ +K++L S
Sbjct: 620 KGLLSVFPADYNPL-----------LFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNY 668
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL
Sbjct: 669 TQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL 728
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L
Sbjct: 729 IGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 788
Query: 661 NIAV 664
V
Sbjct: 789 GAVV 792
>gi|384485216|gb|EIE77396.1| hypothetical protein RO3G_02100 [Rhizopus delemar RA 99-880]
Length = 1147
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 289/554 (52%), Gaps = 81/554 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N+ GIL D+MGLGKTIQTI+ + + + + +
Sbjct: 516 VGGKLKEYQVKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITYLIERKKQN------ 569
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS-IYHGP---NRDMILEKLEACGVEV 248
G LII P S + NW +EF +W+ ++ +Y GP +D+ +++ +V
Sbjct: 570 -------GPFLIIVPLSTLTNWALEFEKWAPSVITVVYKGPPDVRKDIQKRQIKHRDFQV 622
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQ 307
LIT+FD +L ++ W+ +I+DE HR+KN +SKL + + R R+ LTGT +Q
Sbjct: 623 LITTFDYIIKDRPVLCKIKWQYMIIDEGHRMKNTQSKLTLVLRQYYSARYRLILTGTPLQ 682
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEP-----LKHGQRLTAPERFIRIADERKQHL 362
N + EL+ L +++ P + + F E+++ P ++ L E+ + I + L
Sbjct: 683 NNLPELWALLNFILPKIFNSVKSFEEWFNTPFNNQGVQDKVELNEEEQLLII-----KRL 737
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
VLR +LLRR K++ L K + ++ C +S LQ + Y Q+ + L +
Sbjct: 738 HKVLRPFLLRRLKKDVESEL-PDKVETIIKCKLSALQLKLY---YQMKKYGILYGSN--S 791
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+ G K L+N +++L++I NH P +E ++
Sbjct: 792 NNGKT-----SIKGLNN--------------TIMQLRKICNH-----PFVFEEVERVVNP 827
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
+L++ + + GK L++++ + G ++L+F
Sbjct: 828 YKLSNELL---------------------YRVSGKFDLLDRILPKLRATGHRVLIFFQMT 866
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
+++DI+E F I +G+ RLDGST S+ R +L+ FN+ S +FL+STRAGGLGLNL
Sbjct: 867 QIMDIMEDFCIYRGFRHLRLDGSTKSDDRSNLLKQFNAPDSPYFIFLLSTRAGGLGLNLQ 926
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V+IFD +WNP QDLQAQDR+ R GQ + V +FRL++ S+EE + R YK +
Sbjct: 927 TADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIFRLITEDSIEENILARAQYKLDIDG 986
Query: 662 IAV-SGKLEKRYFE 674
+ +GK + R E
Sbjct: 987 KVIQAGKFDHRSTE 1000
>gi|154299240|ref|XP_001550040.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10]
Length = 1433
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 282/558 (50%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ L + + K
Sbjct: 538 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLLTYLI--------EVKK 589
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
N G L+I P S + NW +EF +W+ +Y GP R L +VL
Sbjct: 590 QN-----GPFLVIVPLSTLTNWTLEFEKWAPAIGKIVYKGPPNTRKQQQNHLRYGNFQVL 644
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ ILS++ W +I+DE HR+KN +SKL + TR R+ LTGT +QN
Sbjct: 645 LTTYEYIIKDRPILSKIKWVHMIIDEGHRMKNSQSKLSATLTQYYTTRYRLILTGTPLQN 704
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ LT E+ + I + L
Sbjct: 705 NLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQILVI-----RRLH 759
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ R Y+ Q + + L S
Sbjct: 760 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQARLYK--------QMVTHNKLVVS 810
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH + +
Sbjct: 811 DGK--GGKTGARGLSNM--------------IMQLRKLCNHPFVFRE------------- 841
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
V +I S +S GK L++++ + + G ++L+F
Sbjct: 842 -------------VEDQMNPTGYINDSLWRSAGKFELLDRILPKYQATGHRVLMFFQMTA 888
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
++DI+ +FL +G F RLDG+T S+ R L+ +FN+ S+ FL+STRAGGLGLNL +
Sbjct: 889 IMDIMGEFLDYRGIKFMRLDGTTKSDDRSLLLKEFNAPNSEYFCFLLSTRAGGLGLNLQT 948
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 949 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERAKFKLDMDGK 1008
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1009 VIQAGRFDNKSSETDRDA 1026
>gi|336263296|ref|XP_003346428.1| STH1 protein [Sordaria macrospora k-hell]
gi|380089940|emb|CCC12251.1| putative STH1 protein [Sordaria macrospora k-hell]
Length = 1486
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 295/558 (52%), Gaps = 80/558 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + + +
Sbjct: 536 VGGQLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKQ-------- 587
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
+ G L+I P S + NW +EF +W+ + + +Y GP R + +++ +VL
Sbjct: 588 -----QNGPYLVIVPLSTLTNWNLEFDKWAPSVSKIVYKGPPNTRKLHQDRIRRGDFQVL 642
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ +LS++ W +I+DE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 643 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQFYSTRFRLILTGTPLQN 702
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+++ ++V P + + F E+++ P + GQ LT E+ + I R+ H
Sbjct: 703 NLAELWSMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVI---RRLH-- 757
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K + V+ C S LQ+R Y++++ +I L++
Sbjct: 758 KVLRPFLLRRLKKD-VEKDLPDKTEKVIKCKFSALQQRLYKQMVTHQKI--LVSDGKGGK 814
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ +++L+++ NH P DE + Q
Sbjct: 815 TG--------ARGLSNM--------------IMQLRKLCNH-----PFVFDEVENQMNPT 847
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
++ DL+ ++ GK L++++ + + G ++L+F
Sbjct: 848 NTSN-------DLLW--------------RTAGKFELLDRVLPKYKATGHRVLMFFQMTA 886
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
++DI+E FL +G + RLDG+T S R L+ FN+ S +FL+STRAGGLGLNL +
Sbjct: 887 IMDIMEDFLRFRGIQYLRLDGTTKSEDRSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT 946
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+S+ S+EE + R +K +
Sbjct: 947 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGK 1006
Query: 663 AV-SGKLEKRYFEGVQDC 679
+ +G+ + + E +D
Sbjct: 1007 VIQAGRFDNKSSETDRDA 1024
>gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
Length = 816
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 285/560 (50%), Gaps = 72/560 (12%)
Query: 137 LLEHQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQ EGVKFLYK L +N++G I+ D+MGLGKT+Q IA L T+L
Sbjct: 224 LRPHQVEGVKFLYKCTTGMLVENQYGCIMADEMGLGKTLQCIALLW-----------TLL 272
Query: 192 KDNKVDKKGYV---LIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKL--- 241
K + K + +I CPSS+++NW E +W + ++I + +LE++
Sbjct: 273 KQSPHPGKPSIEKCIIACPSSLVKNWANELVKWLGKDAVTPLAIDGKGGKAELLERVGRW 332
Query: 242 -EACGVEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTR 296
A G V +I S+++ R L+ +++ DE HRLKN +S + A L
Sbjct: 333 VAARGRNVTQPVMIVSYETLRTLTVHLAHCKIGLLLCDEGHRLKNSESLTFQALNGLDVN 392
Query: 297 NRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIAD 356
R+ LTGT +QN + E ++L ++ P LG++ FR+ ++ + G+ A + ++
Sbjct: 393 RRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDSLASDGVKAESE 452
Query: 357 ERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLI 416
++ + L ++ K+++RRT + +L + K + VVFC +S+ Q YR + PEI+ L
Sbjct: 453 KKLKELGNLVTKFIIRRTNDLLSKYLPV-KYEQVVFCGLSEFQLSLYRLFIVSPEIKAL- 510
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
L G S P L + L+++ NH EL+ D P
Sbjct: 511 -----------------------LRGTTSQP----LKAINILKKLCNHPELL-----DLP 538
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKI 535
D + L F G ++ GK LE+ ++ ++ DKI
Sbjct: 539 DDLKGCDHLIPEGFSSTAARSRGKGGKQTV----RCDWGGKFLVLERFLHQIKTQTTDKI 594
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK K Y F RLDGS RQ LVD FN K+ +FL+S++AG
Sbjct: 595 VLISNYTQTLDLFEKLCRSKKYGFFRLDGSMTIVKRQKLVDQFNDPDGKEFIFLLSSKAG 654
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +S G++EE ++ RQ
Sbjct: 655 GCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQA 714
Query: 655 YKQQLSNIAVSGKLE-KRYF 673
KQ LS+ V K + +R+F
Sbjct: 715 NKQALSSAVVDEKEDAERHF 734
>gi|348579584|ref|XP_003475559.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cavia
porcellus]
Length = 1674
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 289/585 (49%), Gaps = 103/585 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 462 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 514
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 515 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 568
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 569 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 628
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 629 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 672
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 673 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 730
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 731 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 756
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 757 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 800
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 801 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 860
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQK-RHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
+ VVIFD +WNP DLQAQ R+ R GQ+ R V ++RL++ G++EE + R K L ++
Sbjct: 861 DTVVIFDSDWNPQNDLQAQARAHRIGQRSRLVNIYRLVTKGTVEEEIIERAKKKMVLDHL 920
Query: 663 AV-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 921 VIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 965
>gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis]
gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis]
Length = 756
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 284/556 (51%), Gaps = 71/556 (12%)
Query: 135 CRLLE-HQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C++L HQREGVKFLY + +G I+ D+MGLGKT+Q I + + + S+
Sbjct: 149 CKVLRPHQREGVKFLYDCTTGARIQGSYGCIMADEMGLGKTLQCITLIWTLLRQGPSAQP 208
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA--- 243
+ K V+I+ PSS+++NW E +W + N ++D I LE
Sbjct: 209 IVSK---------VIIVAPSSLVKNWYNELYKWLGNRINALAIDSGSKDEIDRNLERYMS 259
Query: 244 -----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
VLI S++++R+H + L + +VI DE HRLKN +S+ Y A +L R
Sbjct: 260 QQGSRTPTPVLIISYETFRLHAAALHNGSVGLVICDEGHRLKNLESQTYQALNKLNATRR 319
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT F+ ++ P+ G+ A + + ER
Sbjct: 320 VLLSGTPIQNDLLEYFSLVHFVNQGILGTVSEFKRKFETPILRGRDADATDAEHKKGIER 379
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L +++ K ++RRT +L + K + VV C ++ LQ Y+RL+ ++ + +
Sbjct: 380 LTELASLVNKCIIRRTAAILSKYLPI-KVEQVVCCRLTALQTAIYKRLIHSKALKIKLAE 438
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
S G P G + + L+++ NH ELI + E +
Sbjct: 439 G---SKGKP-------------GGVSTSSLGFI----TSLKKLCNHPELIYEKAQMEDEG 478
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILL 537
E+ F DL N Q E LS GKM+ L+ ++ + A+ DK++L
Sbjct: 479 FEGVLEM----FPQKFDL--KNVQPE----LS-----GKMQVLDYILAVTKATSDDKVVL 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK ++ Y RLDGS RQ +VD FN +F++S++AGG
Sbjct: 524 VSNYTQTLDLFEKLCRQRRYQHVRLDGSMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGC 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR--------HVIVFRLLSAGSLEEL 648
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V ++RLLS G++EE
Sbjct: 584 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKKAIFDLLLQVFIYRLLSTGTIEEK 643
Query: 649 VYTRQVYKQQLSNIAV 664
++ RQ +K+ LS+ V
Sbjct: 644 IFQRQAHKKALSSCVV 659
>gi|403339166|gb|EJY68833.1| hypothetical protein OXYTRI_10550 [Oxytricha trifallax]
Length = 992
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 278/539 (51%), Gaps = 93/539 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L+ HQ + + ++ LY GIL DDMGLGKTIQ I+ + ++ + K
Sbjct: 87 KLMPHQIDSLNWMITLYDLGLNGILADDMGLGKTIQAISMMVYLY-----------QYKK 135
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN----RDMILEKLEACGVEVLIT 251
V +G LII P S I NW EF +W+ F + P ++++ E+++ V +T
Sbjct: 136 V--QGPHLIITPKSTISNWMKEFEKWAPFLKVVNLIPTMEHRKEILKEQMQPGTFNVCVT 193
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
+++ I L + +W + DEAH+LKN +K+ + +L RNRI +TGT +QN +
Sbjct: 194 TYEGVNICSGALQKYDWHYQVYDEAHKLKNIDAKISLTSRKLSCRNRILMTGTPLQNNLR 253
Query: 312 ELYNLFDWVAPGSLGTREHFREFY--DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
EL+ + +++ P G+ + F +++ ++P GQ++T + Q L +LR +
Sbjct: 254 ELFGILNYLMPEIFGSEDDFNDWFCIEDP-SVGQKMTI---------DSIQKLHKILRPF 303
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
LLRR K++ L E NV M+ +Q Y +LL+ I
Sbjct: 304 LLRRVKKDLEVKLPDKIEINVK-INMTKMQLELYEQLLKTTSI----------------- 345
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL---IKPNPRDEPDKQRKDAELA 486
+N + F L L++L++ NH L I+P +E
Sbjct: 346 -------FNNKNTTVKTYFNL----LMQLRKACNHPYLFDGIEPEGAEE----------- 383
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
+G I V +CGKMR L+KL+ +S+ +++L+FS +LD
Sbjct: 384 ---YGEHI-----------------VDNCGKMRFLDKLLKKISSQKEQVLIFSQFTSVLD 423
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
I+E + + +G+ F RLDG+T R+ ++ +F + S+ +FL+ST+AGGLGLNL+SAN
Sbjct: 424 IIEDYCLMRGFQFCRLDGTTDLEERERMITEFTAPNSELFIFLLSTKAGGLGLNLMSANH 483
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
VVI+D +WNP DLQA DR++R GQK+ V ++RL++ S+EE + RQ K +L + +
Sbjct: 484 VVIYDSDWNPQVDLQAMDRAYRIGQKKDVFIYRLITKPSIEEKIIERQAIKLKLDQVII 542
>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
Length = 831
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 336/684 (49%), Gaps = 94/684 (13%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ SV + N T P RPP + +Q G + + P +P E A V
Sbjct: 106 FRKAFSVPLINKNTTAYNPNRPPPTLGLRQ----GAVF-VAKPLHDPCD--EFAIVLYDP 158
Query: 82 VFDDEEKEKEQEQ---EKFGRHQLGQFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCR 136
DD+ K+ E +K H E L + K +GE+P +VP I+ R
Sbjct: 159 TVDDKPKDTAPEAIEEKKEEPEVKVDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDPR 216
Query: 137 LLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESS 186
L + HQ EGV+F+Y+ + + +G I+ D+MGLGKT+Q I L + + ++
Sbjct: 217 LAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAG 276
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE 242
STI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 277 KSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 327
Query: 243 ACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 328 QWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLN 387
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
R+ L+GT +QN + E + L + P LGTR FR+ ++ P+ G+ A E +
Sbjct: 388 VSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERKR 447
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
DE L+A++ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ
Sbjct: 448 GDECLVELLAIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFVASPDIQA 506
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
L L G S P L + L+++ NH +L+ + D
Sbjct: 507 L------------------------LRGKGSQP----LKAINILKKLCNHPDLLDLSA-D 537
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASK 531
P ++ + P+ D V A+ DVK GKM+ L++++ A
Sbjct: 538 LPGCEQ---------YWPE-DYVPKEARGRD----RDVKPWYSGKMQVLDRMLARIRADT 583
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIS 590
DKI+L S + LD+ E+ + Y RLDG+ N RQ LVD FN + VFL+S
Sbjct: 584 NDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGDEFVFLLS 643
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++
Sbjct: 644 SKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIF 703
Query: 651 TRQVYKQQLSNIAV-SGKLEKRYF 673
RQ +KQ LS+ V S + +R+F
Sbjct: 704 QRQSHKQSLSSCVVDSAEDVERHF 727
>gi|348526954|ref|XP_003450984.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oreochromis niloticus]
Length = 1210
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 300/599 (50%), Gaps = 73/599 (12%)
Query: 87 EKEKEQEQEKFGRH---QLGQFQFDHTGPFEPLVLSKDGEYPIIQV--PASINCRLLEHQ 141
E + E+EQ + RH G + +K G P++ V + L HQ
Sbjct: 553 ETKPEEEQTRRPRHDPLAPGALVMPRPSANHQWLNNKSG-LPVVDVVLDPHLTTHLRPHQ 611
Query: 142 REGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
R+G+ FLY+ +G IL D+MGLGKT+Q++A + + + K
Sbjct: 612 RDGLLFLYECVMGMRAAGCYGAILADEMGLGKTLQSVALSWTLLKQGPYGGRPVAKR--- 668
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW------STFNVSIYHGPNRDMILEKLEACGVEVLI 250
VL++ P S++QNW EF++W S F V H + +L L + VL+
Sbjct: 669 -----VLVVTPGSLVQNWAAEFNKWLGRERISVFTVDQDHRIEQ-FVLSPLHS----VLV 718
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + +V++ ++I DE HRLKN K A L+ R+ LTGT +QN +
Sbjct: 719 ISYEMLLRCLEQVQKVDFGLIICDEGHRLKNSNIKTSSALSSLECNRRVILTGTPVQNDL 778
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E Y + ++V G LG+ +R+ Y+EP+ ++ + E + +ER L + ++
Sbjct: 779 QEFYAIIEFVNSGILGSSTAYRKVYEEPILRSRQPSCTEEERVLGEERAAELSRLTGMFI 838
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + + D +FC S LQ+ Y+ LL + C GS T
Sbjct: 839 LRRT-QEIINRYLPPRLDWTLFCEPSSLQRELYKHLLCHRVFRA-------CLQGSTQTH 890
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA-ELASAV 489
L C+ L+++ NH L+ +R DA + S++
Sbjct: 891 TH-------------------LACITALKKLCNHPGLLHIT------VKRTDAGSVESSL 925
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYS---WASKGDKILLFSYSVRMLD 546
+ DL + + F + GK+ L L+ + +S +++ +Y+ + LD
Sbjct: 926 YEGLADLFPESYSSGGFT----IADSGKLLVLSDLLAAIRQLSSSDRVVVVSNYT-QTLD 980
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANR 605
+L+ + GY+F RLDG+TP+N RQ LVD FNS S+ +FL+S++AGG+GLNL+ A+
Sbjct: 981 LLQDLCVHMGYTFCRLDGNTPTNQRQRLVDSFNSPYSQNFLFLLSSKAGGVGLNLIGASH 1040
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+V++D +WNPA D+QA R +R GQK+ V ++RLL+AG++EE ++ RQV KQ LS V
Sbjct: 1041 LVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVV 1099
>gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio]
Length = 1174
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 184/621 (29%), Positives = 300/621 (48%), Gaps = 71/621 (11%)
Query: 64 PQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLG-----------QFQFDHTGP 112
P P ++ P K D E +K + ++ + G Q+Q++ +G
Sbjct: 486 PAYRPVSKSFTKPALKGGALTDSELDKPICKPRYDPNAPGALVMPRPTADHQWQYNKSG- 544
Query: 113 FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLG 167
PLV + + + L HQ+EGV FLY+ + G IL D+MGLG
Sbjct: 545 -APLV--------DVVIDPHLTNHLRPHQKEGVVFLYECLMGMRLAGRCGAILADEMGLG 595
Query: 168 KTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNV 226
KT+Q + L + + ++K L++CP S+++NW EF++W +
Sbjct: 596 KTLQCVCVLWTLLRQGPYGGRPVMKR--------ALVVCPGSLVKNWAAEFNKWLGRERI 647
Query: 227 SIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL 286
S+Y + + + + VL+ S++ L E+++ ++I DE HRLKN K
Sbjct: 648 SVYTVDQDHRVEDFVSSPLCSVLVISYEMLLRSVDRLKELDFGVLICDEGHRLKNSNIKT 707
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
A L R+ LTGT +QN + E Y++ ++V PG LGT +R+ Y+EP+ ++ +
Sbjct: 708 AGALTALSCTRRLILTGTPVQNDLQEFYSIIEFVNPGILGTSAAYRKIYEEPILRSRQPS 767
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
E I +ER L + + LRRT +E I + + + VFC ++LQ R YR L
Sbjct: 768 CTEEERCIGEERAAELFRLTGVFTLRRT-QEIINQYLSERIEWTVFCKPTELQIRLYRVL 826
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
L I+ +C L G + L C+ L+++ NH
Sbjct: 827 LSTRPIR---------AC---------------LSGSHTYTHSPHLVCINALKKLCNHPA 862
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMY 526
L+ + R +E A ++ ++ + E G GK+ L L+
Sbjct: 863 LLY-----NTLQVRMCSEKADEMYEGEVKEL---FPEEYSTGAFSTADSGKLLVLTDLLS 914
Query: 527 S--WASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSS-PS 583
+ ++ D+++L S + LD+L+ + GY + RLDG TP RQ +VD FNS S
Sbjct: 915 AIQHVNRTDRVVLVSNHTQTLDLLQDVCDQIGYKWCRLDGQTPVGQRQKIVDSFNSPHSS 974
Query: 584 KQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAG 643
+ L+S++AGG+GLNL+ A+ +V++D +WNPA D+QA R +R GQK+ V ++R L+ G
Sbjct: 975 SFLLLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTG 1034
Query: 644 SLEELVYTRQVYKQQLSNIAV 664
S+EE +Y RQV KQ LS V
Sbjct: 1035 SIEEKIYQRQVSKQGLSGTVV 1055
>gi|366996032|ref|XP_003677779.1| hypothetical protein NCAS_0H01200 [Naumovozyma castellii CBS 4309]
gi|342303649|emb|CCC71430.1| hypothetical protein NCAS_0H01200 [Naumovozyma castellii CBS 4309]
Length = 1065
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 278/542 (51%), Gaps = 86/542 (15%)
Query: 130 PASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
P IN L +Q +G+ +L L+K+K GIL D+MGLGKT+QTI+FL +
Sbjct: 125 PGFINGTLRNYQIQGLNWLVSLHKSKLAGILADEMGLGKTLQTISFLGYL---------- 174
Query: 190 ILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MILEKLEAC 244
V+K G L+I P S + NW E ++W+ N I G + ++ +KL AC
Sbjct: 175 ----RYVEKIPGPFLVIAPKSTLNNWLREINKWTPEVNAFILQGDKEERAQLVKDKLLAC 230
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
++++ S++ S +++W+ +I+DEAHR+KNE+S L E + NR+ +TGT
Sbjct: 231 DFDIVVASYEIIIREKSAFRKIDWQYIIIDEAHRIKNEESLLSQVLREFTSSNRLLITGT 290
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYD-EPLKHGQRLTAPERFIRIADERKQHLV 363
+QN + EL+ L +++ P + F +++ E + Q E+ ++ L
Sbjct: 291 PLQNNLHELWALLNFLLPDIFSDSQDFDDWFSSETTEEDQ-----EKVVK-------QLH 338
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VL+ +LLRR K + L+ +E N+ + MS++QK+ Y+++L+ KD+
Sbjct: 339 TVLQPFLLRRLKNDVETSLLPKQELNL-YVGMSNMQKKWYKQILE---------KDIDAV 388
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
GS + + E RL N+ +++L++ NH L D
Sbjct: 389 NGSNVNK-ESKTRLLNI--------------VMQLRKCCNHPYLF-------------DG 420
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ D LV +A+ + L +G ++L+FS R
Sbjct: 421 AEPGPPYTTDEHLVYNSAKLKVLDKLLKKM---------------KEEGSRVLIFSQMSR 465
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVS 602
+LDILE + +GY + R+DGST R +D++N SK+ +FL++TRAGGLG+NL S
Sbjct: 466 VLDILEDYCFFRGYEYCRIDGSTDHEDRIRAIDEYNEPGSKKFIFLLTTRAGGLGINLTS 525
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
AN VV+FD +WNP DLQA DR+ R GQKR V VFRL++ S+EE + R K +L +
Sbjct: 526 ANIVVLFDSDWNPQADLQAMDRAHRIGQKRQVKVFRLVTDNSVEEKILERATQKLRLDQL 585
Query: 663 AV 664
+
Sbjct: 586 VI 587
>gi|355779828|gb|EHH64304.1| DNA repair and recombination protein RAD54B [Macaca fascicularis]
Length = 908
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 273/544 (50%), Gaps = 61/544 (11%)
Query: 136 RLLEHQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGCLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NV+FC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL----IKPNPRDEPDKQRKDAEL 485
++ P L C+ L+++ NH L IK DK + +
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLY 619
Query: 486 AS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYS 541
+VF D + + L K GK++ L KL+ +K++L S
Sbjct: 620 KGLLSVFPADYNPL-----------LFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNY 668
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ L+IL++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL
Sbjct: 669 TQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL 728
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ + ++++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L
Sbjct: 729 IGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 788
Query: 661 NIAV 664
V
Sbjct: 789 GAVV 792
>gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis]
Length = 1109
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 186/635 (29%), Positives = 310/635 (48%), Gaps = 87/635 (13%)
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G ++P+ I L HQR+G+K+L+ L+ GGILGDDMGLGKT+Q FLA +F
Sbjct: 386 GPRSTFELPSKIATMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLF- 444
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRDMILEK 240
S ++K L++ P +++ +W E + + Y G + +
Sbjct: 445 -----HSRLIK--------RALVVAPKTLLAHWIKELAAVGLSRKTREYFGTSLKARQYE 491
Query: 241 LEACGVE--VLITSFDSYRIHGSIL----------SE--VNWEIVIVDEAHRLKNEKSKL 286
L+ + +L+T++D R + L SE W+ +I+DE H +KN ++
Sbjct: 492 LQYILQDKGILLTTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIKNPSTQR 551
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ LE+ + +RI ++GT +QN + EL+ LF++ P LG F++ Y+ P+ G
Sbjct: 552 AKSLLEIPSAHRIIISGTPIQNNLKELWTLFNFSCPNLLGDYNGFKKKYEHPILRGNEKN 611
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGH------LMMGKEDNVVFCTMSDLQK 400
A R + + L ++ Y LRR K E + K + +V+ ++ Q+
Sbjct: 612 ASAREKHVGSTIAKELRERIQPYFLRRLKNEVFKEDDLTTATLSKKNEMIVWLRLTSCQR 671
Query: 401 RAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQ 460
YR LQ + L GSPL + K++ CD P L +
Sbjct: 672 ELYRAFLQSELV-------LSAFDGSPLAALTILKKI-----CDH-PLLLTKRAA---ED 715
Query: 461 ISNHLELIKPNPRDEPDKQRKDAELAS--AVFGPDIDLVGGNAQNESFIGLSDVKSCGKM 518
+ ++ I P +DA LA A+ D+ A+ F D SC K+
Sbjct: 716 VLEGMDFISP----------EDAGLAEKLALHVADV------AEKAEFQEKHDNISC-KI 758
Query: 519 RALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDF 578
+ L+ + +G +L+FS S +ML++++ L GY F R+DG+T ++ R +V+DF
Sbjct: 759 SFIMSLLDNLIPEGHNVLIFSQSRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDF 818
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+FL++++ GGLGL L A+RV++ DP WNP+ D Q+ DR++R GQ++ V+V+R
Sbjct: 819 QEGVGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLVYR 878
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD 698
L++ G++EE +Y +Q++K L A K + RYF QD + ELF + D+S
Sbjct: 879 LMTCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYF-SQQDLR----ELFSLPKQGFDIS- 932
Query: 699 NLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHI 733
L ++ E H+ Q + E LETH+
Sbjct: 933 -LTQQQLHEEHDHQHKMDE----------SLETHV 956
>gi|334350211|ref|XP_001373609.2| PREDICTED: probable global transcription activator SNF2L1
[Monodelphis domestica]
Length = 1153
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 267/538 (49%), Gaps = 86/538 (15%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ ++ LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 169 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 215
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLITS 252
+ G +++ P S + NW EF RW ++ ++D I + + +V +TS
Sbjct: 216 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMPGEWDVCVTS 275
Query: 253 FDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIME 312
++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN + E
Sbjct: 276 YEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHE 335
Query: 313 LYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLR 372
L+ L +++ P + + F ++D G + L AVL+ +LLR
Sbjct: 336 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDHKLV------------ERLHAVLKPFLLR 383
Query: 373 RTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVE 432
R K E L KE + + +S +Q+ Y R+L
Sbjct: 384 RIKAEVEKSLPPKKEVKI-YLGLSKMQREWYTRILM------------------------ 418
Query: 433 CCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGP 492
K +D L+ +L L++L++ NH L D +
Sbjct: 419 --KDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPYTT 463
Query: 493 DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFL 552
D LV + GKM AL+KL+ +G ++L+FS R+LDILE +
Sbjct: 464 DTHLVNNS---------------GKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDYC 508
Query: 553 IRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIFDP 611
+ +GY + RLDG TP R+ +D FN+ + +K +F++STRAGGLG+NL +A+ V+++D
Sbjct: 509 MWRGYEYCRLDGQTPHEEREEAIDTFNAPNSTKFIFMLSTRAGGLGINLATADVVILYDS 568
Query: 612 NWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
+WNP DLQA DR+ R GQK+ V VFRL++ ++E+ + R K +L +I + G+L
Sbjct: 569 DWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQQGRL 626
>gi|295674669|ref|XP_002797880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280530|gb|EEH36096.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 1332
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 287/550 (52%), Gaps = 80/550 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K + +
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQN------ 486
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R + + +VL
Sbjct: 487 -------GPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVL 539
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS+V W +IVDE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 540 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 599
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+NL ++V P + + F E+++ P + GQ LT E+ + I + L
Sbjct: 600 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVI-----RRLH 654
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q + + L S
Sbjct: 655 KVLRPFLLRRLKKD-VEKDLPEKQERVIKCRFSALQAKLYK--------QLVTHNKLVVS 705
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH + + DE
Sbjct: 706 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH-PFVFESVEDE-------- 740
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ G A N+ ++ GK L++++ + + G ++L+F +
Sbjct: 741 ------------MNPGRATNDLIW-----RTAGKFELLDRILPKFKASGHRVLMFFQMTQ 783
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
+++I+E FL +G + RLDGST S+ R L+ +FN+ S+ FL+STRAGGLGLNL +
Sbjct: 784 IMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT 843
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R +K +
Sbjct: 844 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGK 903
Query: 663 AV-SGKLEKR 671
+ +GK + +
Sbjct: 904 VIQAGKFDNK 913
>gi|378732337|gb|EHY58796.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 1120
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 301/610 (49%), Gaps = 95/610 (15%)
Query: 67 NPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDG---E 123
NP+ R A +++ N ++EEK K+ K G +G+ + + E L K G +
Sbjct: 124 NPKIREVMAEIDRQNA-EEEEKAKKGVSRKGGAAAIGKRKTEQEEDAELLRDEKRGTASQ 182
Query: 124 YPIIQVPASI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
+ PA I + ++Q G+ +L L++N GIL D+MGLGKT+QTI+FL +
Sbjct: 183 TVFRESPAFIKGGEMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYL--- 239
Query: 183 DESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MIL 238
+ KG LII P S + NW EF +W+ +V + G + +I
Sbjct: 240 ----------RHICGIKGPHLIIVPKSTLDNWAREFKKWTPDVDVLVLQGAKDERHALIN 289
Query: 239 EKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
++L +V ITS++ + L + WE +IVDEAHR+KNE+S L +RNR
Sbjct: 290 DRLVDEKFDVCITSYEMILREKAHLKKFAWEYIIVDEAHRIKNEESSLAQIIRVFSSRNR 349
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ +TGT +QN + EL+ L +++ P G E F ++ + D
Sbjct: 350 LLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDSWFSNQNED-------------QDTV 396
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L VLR +LLRR K + L+ KE N ++ MS++Q R Y+++L+ K
Sbjct: 397 VQQLHRVLRPFLLRRVKSDVEKSLLPKKELN-LYVGMSEMQVRWYKKILE---------K 446
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDE 475
D+ G+ + E RL N+ +++L++ NH E +P P
Sbjct: 447 DIDAVNGAG-GKRESKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYT 491
Query: 476 PDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKI 535
D+ V + GKM L+K++ +G ++
Sbjct: 492 TDEHL-------------------------------VYNSGKMIILDKILKRMKEEGSRV 520
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
L+FS R+LDILE + + +G+ + R+DG T R + +D++N S++ VFL++TRAG
Sbjct: 521 LIFSQMSRVLDILEDYCVFRGHQYCRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAG 580
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
GLG+NL +A+ V+++D +WNP DLQA DR+ R GQ + V VFR ++ ++EE V R
Sbjct: 581 GLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVKVFRFVTENAIEEKVLERAA 640
Query: 655 YKQQLSNIAV 664
K +L + +
Sbjct: 641 QKLRLDQLVI 650
>gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca]
Length = 716
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 281/546 (51%), Gaps = 70/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 123 LRPHQREGVKFLWECVTSRRVPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECRPEID 182
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 183 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 233
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 234 ARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 293
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 294 SGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 353
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL-QLPEIQCLINKDL 420
L +++ + L+RRT + + + K + VV C ++ LQ Y+R L Q + L +
Sbjct: 354 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKM 412
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S S +T L+++ NH LI +E D
Sbjct: 413 SVSSLSSITL---------------------------LKKLCNHPALIYDKCVEEED--- 442
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFS 539
E A +F P G + LS GKM L+ ++ S+ DK++L S
Sbjct: 443 -GFEGALEIFPP------GYSSKALEPQLS-----GKMLVLDYILAVTRSRSSDKVVLVS 490
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ EK + Y + RLDG+ R +V+ FN+ S VF++S++AGG GL
Sbjct: 491 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGL 550
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+
Sbjct: 551 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 610
Query: 659 LSNIAV 664
LS+ V
Sbjct: 611 LSSCVV 616
>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
terrestris]
Length = 746
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 283/548 (51%), Gaps = 63/548 (11%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ K +G I+ D+MGLGKT+Q I L + + +
Sbjct: 149 CNILRPHQREGVKFMYECVTGKRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 208
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA--- 243
I K +I+ PSS+++NW E +W V G N+ I KL
Sbjct: 209 LIEK---------AIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKVDIDTKLTGFMK 259
Query: 244 -----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y A + LK + R
Sbjct: 260 TYGRRCINPILIISYETFRLHAQVLHQDEVGLVLCDEGHRLKNSENQTYQALINLKAKRR 319
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT + FR+ ++ P+ GQ A + ++A ER
Sbjct: 320 VLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTERKLAQER 379
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
LV+++ K L+RRT +L + K + VV M LQ Y +Q ++ + +
Sbjct: 380 LAELVSIVNKCLIRRTSALLSKYLPL-KYELVVCIRMGKLQTDLYNSFIQSDSVRKSMEE 438
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ S K+ + L + L+++ H +L+ D+ +
Sbjct: 439 NSANS-----------KKGKSFS---------TLAAITLLKKLCCHPDLV----YDKILE 474
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILL 537
+ E A+ + P+ + E LS GK+ L+ L+ S + DKI+L
Sbjct: 475 KSDGFENAAKLMPPNYN------TKEIMPELS-----GKLMVLDCLLASIKTTTNDKIVL 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ EK ++ Y++ RLDG+ R +V+ FN S +F++S++AGG
Sbjct: 524 VSNYTQTLDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFMLSSKAGGC 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++R L G++EE ++ RQ +K
Sbjct: 584 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEKIFQRQAHK 643
Query: 657 QQLSNIAV 664
+ LS+ V
Sbjct: 644 KALSSTVV 651
>gi|380024032|ref|XP_003695811.1| PREDICTED: DNA repair and recombination protein RAD54-like [Apis
florea]
Length = 716
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 285/550 (51%), Gaps = 71/550 (12%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ K +G I+ D+MGLGKT+Q I L + + +
Sbjct: 123 CNILRPHQREGVKFMYECVTGKRIEGAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKP 182
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKL----- 241
I K +I+ PSS+++NW E +W + G N+ I KL
Sbjct: 183 LIDK---------AIIVAPSSLVKNWYNEIFKWLKNRIQPLAIDGGNKTDIDTKLIGFMK 233
Query: 242 ---EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H IL + +++ DE HRLKN +++ Y A + LK + R
Sbjct: 234 TYGRKCVNPILIISYETFRLHAHILHQDEVGLILCDEGHRLKNSENQTYQALINLKAKRR 293
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
I L+GT +QN ++E ++L +V G LGT + FR+ ++ P+ GQ A + ++A ER
Sbjct: 294 ILLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTERKLAQER 353
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
+ LVA++ K L+RRT +L + K + VV M +Q Y+ +Q I+ + +
Sbjct: 354 LKELVAIVNKCLIRRTSALLSKYLPL-KYELVVCIKMGKVQTDLYKNFIQSDSIKKSMEE 412
Query: 419 DLPCSCGSPLTQVECCK--RLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
+L E CK + ++L L + L+++ NH +L+ ++
Sbjct: 413 NL-----------ENCKKGKRESLS---------TLSAITLLKKLCNHPDLVYEKILEKS 452
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKI 535
D A+L + + + E LS GK+ L+ L+ S + DKI
Sbjct: 453 DGFENAAKLMPSNY----------STKEILPELS-----GKLMVLDCLLASIKTTTNDKI 497
Query: 536 LLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAG 594
+L S + LD+ EK ++ Y++ RLDG+ R +V+ FN S S +F++S++AG
Sbjct: 498 VLVSNYTQTLDLFEKLCYKRCYNYVRLDGTMTIKKRSKVVERFNDSNSNDFIFMLSSKAG 557
Query: 595 GLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQV 654
G GLNL+ ANR+++FDP+WNPA D QA R +R GQK+ G++EE ++ RQ
Sbjct: 558 GCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQA 611
Query: 655 YKQQLSNIAV 664
+K+ LS+ V
Sbjct: 612 HKKALSSTVV 621
>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
2508]
gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma
FGSC 2509]
Length = 835
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 299/580 (51%), Gaps = 82/580 (14%)
Query: 121 DGEYPIIQVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQ 171
+GE+P +VP I+ RL + HQ EGV+F+Y+ + + +G I+ D+MGLGKT+Q
Sbjct: 207 EGEHP--RVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQ 264
Query: 172 TIAFLAAVFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNV 226
I L + + ++ STI K ++ CPSS+++NW E +W +
Sbjct: 265 CITLLWTLLKQSPDAGKSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPF 315
Query: 227 SIYHGPNRDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHR 278
+I +++ + +L + V+I S+++ R++ L +++ DE HR
Sbjct: 316 AIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHR 375
Query: 279 LKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEP 338
LKN S+ + A L R+ L+GT +QN + E + L + P LGTR FR+ ++ P
Sbjct: 376 LKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKRFEIP 435
Query: 339 LKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDL 398
+ G+ A E + DE L+A++ K+++RRT + +L + K ++VVFC ++
Sbjct: 436 ILRGRDADASEAERKRGDECLVELLAIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPF 494
Query: 399 QKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKL 458
Q Y + P+IQ L L G S P L + L
Sbjct: 495 QLDLYNYFVASPDIQAL------------------------LRGKGSQP----LKAINIL 526
Query: 459 QQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CG 516
+++ NH +L+ + D P ++ + P+ D V A+ DVK G
Sbjct: 527 KKLCNHPDLLDLSA-DLPGCEQ---------YWPE-DYVPKEARGRD----RDVKPWYSG 571
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
KM+ L++++ A DKI+L S + LD+ E+ + Y RLDG+ N RQ LV
Sbjct: 572 KMQVLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLV 631
Query: 576 DDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
D FN + VFL+S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+
Sbjct: 632 DKFNDPEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDC 691
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
V+R ++ G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 692 FVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 731
>gi|344287342|ref|XP_003415412.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Loxodonta africana]
Length = 794
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 180/577 (31%), Positives = 296/577 (51%), Gaps = 76/577 (13%)
Query: 113 FEPLVLSKDGEY-------PIIQVPASINCRLLE-HQREGVKFLYKLYKNK-----HGGI 159
+EP +LS + P+ V I ++L HQREGVKFL++ ++ +G I
Sbjct: 168 YEPPLLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSYGCI 227
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
+ D+MGLGKT+Q I + + + I K +++ PSS+++NW E
Sbjct: 228 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDK---------AVVVSPSSLVKNWYNEVG 278
Query: 220 RWSTFNVS--IYHGPNRDMILEKLEA--------CGVEVLITSFDSYRIHGSILSEVNWE 269
+W + G ++D I +KLE +LI S++++R+H +L + +
Sbjct: 279 KWLGGRIQPLAIDGGSKDEIDQKLERFMNQRGARVPSPILIISYETFRLHVGVLQKGSVG 338
Query: 270 IVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTRE 329
+VI DE HRLKN +++ Y A L T R+ ++GT +QN ++E ++L +V G LGT
Sbjct: 339 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAH 398
Query: 330 HFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDN 389
F++ ++ P+ G+ A E + +ER + L++++ + L+RRT + + + K +
Sbjct: 399 EFKKHFELPILKGRDAAASEADRHLGEERLRELISIVNRCLIRRT-SDILSKYLPVKIEQ 457
Query: 390 VVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFC 449
VV C ++ LQ Y+R L+ Q + + L C++
Sbjct: 458 VVCCRLTPLQMELYKRFLR---------------------QAKPAEEL-----CEAKMSV 491
Query: 450 LVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGL 509
L + L+++ NH LI +E D E A +F P G + L
Sbjct: 492 SSLSSITSLKKLCNHPALIYDKCVEEED----GFEGALDIFPP------GYSSKALEPQL 541
Query: 510 SDVKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPS 568
S GKM L+ ++ S+ DK++L S + LD+ EK + Y + RLDG+
Sbjct: 542 S-----GKMLVLDYILAVTRSRSNDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSI 596
Query: 569 NLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFR 627
R +V+ FNS S VF++S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R
Sbjct: 597 KKRAKVVERFNSLSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR 656
Query: 628 FGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
GQK+ ++RLLSAG++EE ++ RQ +K+ LS+ V
Sbjct: 657 DGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVV 693
>gi|358058721|dbj|GAA95684.1| hypothetical protein E5Q_02341 [Mixia osmundae IAM 14324]
Length = 2010
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 283/550 (51%), Gaps = 70/550 (12%)
Query: 135 CRLLE-HQREGVKFLYKL---YKNKHGG-ILGDDMGLGKTIQTIAFLAAVFGKDESSDST 189
C+ L HQ+EG++F+Y+ +K++ G IL D+MGLGKT+Q+I + T
Sbjct: 510 CKHLRPHQKEGIQFMYECVMGFKSEGTGCILADEMGLGKTVQSIGLIW-----------T 558
Query: 190 ILKDNKVDKKGYV----LIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEAC 244
+LK G V LI+CP ++++NW EFS+W + ++ + I ++
Sbjct: 559 LLKQTPYATSGSVIGRALIVCPVTLVKNWSREFSKWLGRERIGVFTADAKSNIKSFTKSK 618
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEI--VIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
VLI ++ R L + + I +I DE HRLK+ +K A L R+ LT
Sbjct: 619 TYAVLIIGYERLRTVVEDLEKCSPPIGVIICDEGHRLKSAGAKTTQALRALSAEKRVILT 678
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + EL+ + D++ PG+L + F++ ++ P+ + A + R L
Sbjct: 679 GTPIQNDLSELHTMVDFIIPGALDSYATFKKCFEVPILKSREPHASSEVRGLGQARSDQL 738
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
++ R ++LRRT E I + K++ V+F + LQ R Y+++L+ P ++ + +
Sbjct: 739 ASIARSFVLRRTS-EVIAQFLPPKQEYVLFVRPTQLQIRLYKKILETPAVRAIFSG---- 793
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
G+ L + K+L C+S P L+ Q H+ KD
Sbjct: 794 KGGNHLVLISALKKL-----CNS-------PGLLVKQLDQQHV---------------KD 826
Query: 483 AELASAVFGPDIDLVGGNAQNE--SFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFS 539
AE D V + E S + ++DV GK AL L+ S K +K++L S
Sbjct: 827 AE----------DEVTESIAEELPSGLDVNDVHLSGKALALANLLESIKEKTEEKVVLVS 876
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLG 597
+ L+ILE F + Y + RLDG+T RQ +V+ FN + K +FL+S+++GG G
Sbjct: 877 NFTQTLNILEAFCKTRRYGYCRLDGATAQKARQGIVETFNRASQKAQFIFLLSSKSGGAG 936
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQ 657
LNL+ A+R+V+FD +WNP+ DLQA R R GQKR ++RLL+ G+L+E ++ RQ+ KQ
Sbjct: 937 LNLIGASRLVLFDSDWNPSNDLQAMARIHRDGQKRPCHIYRLLATGTLDEKIFQRQIIKQ 996
Query: 658 QLSNIAVSGK 667
L+ + G+
Sbjct: 997 GLAGSLMQGE 1006
>gi|340720108|ref|XP_003398485.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Bombus terrestris]
Length = 824
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 265/532 (49%), Gaps = 63/532 (11%)
Query: 140 HQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQR G+ FLY+ N G IL D+MGLGKT+Q I + + K ILK
Sbjct: 234 HQRHGIVFLYECIMGLKISNYFGAILADEMGLGKTLQCITIIWTLLKKGPYG-YPILK-- 290
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWSTFN-VSIYHGPNRDMILEKLEACGVEVLITSF 253
Y+LI+ PS + +W EF W F+ +S Y ++ + + V+I S+
Sbjct: 291 ------YILIVTPSCLCNSWNKEFKHWLGFHRISPYVVDAKNKTKDFKKHIRNSVMIISY 344
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
D + E+ + ++I DE HRLKN K LK + RI LTGT +QN + E
Sbjct: 345 DMLTRCEQEVEEIPFNLIICDEGHRLKNNDIKAAKILHNLKCKRRIILTGTPIQNNLQEF 404
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ L D+V P LG+ F+ +Y++P+ Q TAP+ + + ER L + ++LRR
Sbjct: 405 FTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHVVSLGTERANELREKTKCFILRR 464
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
T +ETI + K + +VFC +S Q+ Y ++ NK+ + S LT
Sbjct: 465 T-QETINKYLPSKHELIVFCRLSIEQQDLYSQV-----TDSWFNKNPSNNNISHLT---- 514
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPD 493
+ L++I NH EL N + E +F D
Sbjct: 515 --------------------VITALKKICNHPELFY-NEKTE-------------LFCID 540
Query: 494 IDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLI 553
G + + + GK+ ++ L+ + +K++L SY + LDILE
Sbjct: 541 ---SKGIHKTSNIKDSTKTVYYGKISIVQTLLRNXKKTEEKLVLVSYYTQTLDILETVCN 597
Query: 554 RKGYSFSRLDGSTPSNLRQSLVDDFNSS-PSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
R+G F RLDGST SN R +++ FNS+ + +VFL+S +AGG+GLNL A+R+++FD +
Sbjct: 598 REGLQFLRLDGSTTSNTRSKIIERFNSTNDNSKVFLLSAKAGGVGLNLPGASRLILFDSD 657
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
WNPA D QA R +R GQK+ V + RLL+ G++EE ++ RQ+ K L+ V
Sbjct: 658 WNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVV 709
>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
Length = 834
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 335/684 (48%), Gaps = 94/684 (13%)
Query: 22 FSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSN 81
F ++ SV + N T P RPP + +Q G + + P +P E A V
Sbjct: 110 FRKAFSVPLINKNTTAYNPNRPPPTLGLRQ----GAVF-VAKPLHDPCD--EFAIVLYDP 162
Query: 82 VFDDEEKEKEQEQ---EKFGRHQLGQFQFDHTGPFEPLVLSK--DGEYPIIQVPASINCR 136
DD+ K+ E +K H E L + K +GE+P +VP I+ R
Sbjct: 163 TVDDKPKDTAPEAIEEKKEEPEVKVDAPLVHKSLAEILGIKKKVEGEHP--RVPVVIDPR 220
Query: 137 LLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKD-ESS 186
L + HQ EGV+F+Y+ + + +G I+ D+MGLGKT+Q I L + + ++
Sbjct: 221 LAKVLRPHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAG 280
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW----STFNVSIYHGPNRDMILEKLE 242
STI K ++ CPSS+++NW E +W + +I +++ + +L
Sbjct: 281 KSTIQK---------AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLR 331
Query: 243 ACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELK 294
+ V+I S+++ R++ L +++ DE HRLKN S+ + A L
Sbjct: 332 QWAIASGRSVTRPVIIVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLN 391
Query: 295 TRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRI 354
R+ L+GT +QN + E + L P LGTR FR+ ++ P+ G+ A E +
Sbjct: 392 VSRRVILSGTPIQNDLSEYFALITVANPDLLGTRLEFRKRFEIPILRGRHADASEAERKR 451
Query: 355 ADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQC 414
DE L+A++ K+++RRT + +L + K ++VVFC ++ Q Y + P+IQ
Sbjct: 452 GDECLVELLAIVNKFIIRRTNDILSKYLPV-KYEHVVFCNLAPFQLDLYNYFVASPDIQA 510
Query: 415 LINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRD 474
L L G S P L + L+++ NH +L+ + D
Sbjct: 511 L------------------------LRGKGSQP----LKAINILKKLCNHPDLLDLSA-D 541
Query: 475 EPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKLMYSW-ASK 531
P ++ + P+ D V A+ DVK GKM+ L++++ A
Sbjct: 542 LPGCEQ---------YWPE-DYVPKEARGRD----RDVKPWYSGKMQVLDRMLARIRADT 587
Query: 532 GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLIS 590
DKI+L S + LD+ E+ + Y RLDG+ N RQ LVD FN + VFL+S
Sbjct: 588 NDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGDEFVFLLS 647
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++
Sbjct: 648 SKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIF 707
Query: 651 TRQVYKQQLSNIAV-SGKLEKRYF 673
RQ +KQ LS+ V S + +R+F
Sbjct: 708 QRQSHKQSLSSCVVDSAEDVERHF 731
>gi|403215942|emb|CCK70440.1| hypothetical protein KNAG_0E01780 [Kazachstania naganishii CBS
8797]
Length = 1359
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 274/529 (51%), Gaps = 67/529 (12%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + T L
Sbjct: 461 VGGTLKEYQIRGLEWMVSLYNNNLNGILADEMGLGKTIQSISLI------------TYLY 508
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHG-PNRDMILE-KLEACGVEVL 249
+ K D+ Y L+I P S I NW +EF +W N IY G PN+ L+ +++ +VL
Sbjct: 509 EMKQDRGPY-LVIVPLSTIANWTLEFEKWGPGLNTIIYKGTPNQRRTLQHQVKTGNFDVL 567
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ S+L + W +I+DE HR+KN +SKL KTRNR+ LTGT +QN
Sbjct: 568 LTTYEYIIKDRSLLCKHEWAHMIIDEGHRMKNAQSKLSFTIQHYYKTRNRLILTGTPLQN 627
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ L ++V P + + F ++++ P + E + L VLR
Sbjct: 628 NLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLVIRRLHKVLRP 687
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+LLRR K+E + + K + V+ C +S LQ++ Y ++L+ + L G+
Sbjct: 688 FLLRRLKKE-VEKDLPDKVEKVIKCHLSGLQQQLYGQMLK--------HNALFVGEGTEG 738
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
K L+N +++L++I NH P DE
Sbjct: 739 ATKSGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VEG 769
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
V P + +N + + GK L++++ + + G ++L+F +++DI+
Sbjct: 770 VINP-------SRENSDLL----YRVAGKFELLDRVLPKFKATGHRVLIFFQMTQVMDIM 818
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRVV 607
E FL K + RLDGST + R ++ +FN+ S FL+STRAGGLGLNL +A+ V+
Sbjct: 819 EDFLRLKNLKYMRLDGSTKAEDRTGMLKEFNAPDSDYFCFLLSTRAGGLGLNLQTADTVI 878
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K
Sbjct: 879 IFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQK 927
>gi|226290625|gb|EEH46109.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb18]
Length = 1332
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 287/550 (52%), Gaps = 80/550 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K + +
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQN------ 486
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R + + +VL
Sbjct: 487 -------GPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVL 539
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS+V W +IVDE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 540 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 599
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+NL ++V P + + F E+++ P + GQ LT E+ + I + L
Sbjct: 600 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVI-----RRLH 654
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q + + L S
Sbjct: 655 KVLRPFLLRRLKKD-VEKDLPEKQERVIKCRFSALQAKLYK--------QLVTHNKLVVS 705
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH + + DE
Sbjct: 706 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH-PFVFESVEDE-------- 740
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ G A N+ ++ GK L++++ + + G ++L+F +
Sbjct: 741 ------------MNPGRATNDLIW-----RTAGKFELLDRILPKFKASGHRVLMFFQMTQ 783
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
+++I+E FL +G + RLDGST S+ R L+ +FN+ S+ FL+STRAGGLGLNL +
Sbjct: 784 IMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT 843
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R +K +
Sbjct: 844 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGK 903
Query: 663 AV-SGKLEKR 671
+ +GK + +
Sbjct: 904 VIQAGKFDNK 913
>gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb03]
Length = 1391
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 287/550 (52%), Gaps = 80/550 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K + +
Sbjct: 492 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQN------ 545
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW +EF +W+ + + +Y GP R + + +VL
Sbjct: 546 -------GPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRKQQQQAIRWGNFQVL 598
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS+V W +IVDE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 599 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 658
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+NL ++V P + + F E+++ P + GQ LT E+ + I + L
Sbjct: 659 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVI-----RRLH 713
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C S LQ + Y+ Q + + L S
Sbjct: 714 KVLRPFLLRRLKKD-VEKDLPEKQERVIKCRFSALQAKLYK--------QLVTHNKLVVS 764
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH + + DE
Sbjct: 765 DGK--GGKTGMRGLSNM--------------LMQLRKLCNH-PFVFESVEDE-------- 799
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+ G A N+ ++ GK L++++ + + G ++L+F +
Sbjct: 800 ------------MNPGRATNDLIW-----RTAGKFELLDRILPKFKASGHRVLMFFQMTQ 842
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVS 602
+++I+E FL +G + RLDGST S+ R L+ +FN+ S+ FL+STRAGGLGLNL +
Sbjct: 843 IMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT 902
Query: 603 ANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
A+ V+I+D +WNP QDLQAQDR+ R GQK V + RL+++ S+EE + R +K +
Sbjct: 903 ADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGK 962
Query: 663 AV-SGKLEKR 671
+ +GK + +
Sbjct: 963 VIQAGKFDNK 972
>gi|383848072|ref|XP_003699676.1| PREDICTED: DNA repair and recombination protein RAD54 [Megachile
rotundata]
Length = 760
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 278/549 (50%), Gaps = 71/549 (12%)
Query: 135 CRLLE-HQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
C +L HQREGVKF+Y+ + +G I+ D+MGLGKT+Q I + + + +
Sbjct: 169 CNILRPHQREGVKFMYECVTGQRIEGAYGCIMADEMGLGKTLQCITLMWTLLKQGPEAKP 228
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA--- 243
I K +I+ PSS+++NW E +W V G N+ I KL
Sbjct: 229 LIEK---------AIIVAPSSLVKNWYNEIFKWLKNRVQPLAIDGGNKADIDAKLTGFMK 279
Query: 244 -----CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
C +LI S++++R+H +L + +V+ DE HRLKN +++ Y A + LK + R
Sbjct: 280 TYGRRCANPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSENQTYQALMNLKAKRR 339
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN ++E ++L +V G LGT + FR+ ++ P+ GQ A + ++A ER
Sbjct: 340 VLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPILRGQDAAATDTERKLAQER 399
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
LV ++ K L+RRT +L + K + VV M LQ Y+ +Q I+ +
Sbjct: 400 LSELVTLVNKCLIRRTSALLSKYLPL-KHELVVCIKMGKLQTDLYKNFIQSDSIKKSME- 457
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+N DG L + L+++ NH +L+ E
Sbjct: 458 -------------------ENSDGSKKGKSLSALSAITLLKKLCNHPDLVY-----EKIL 493
Query: 479 QRKDA-ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKIL 536
Q+ D E A+ + P+ + E LS GK+ L+ L+ S + DKI+
Sbjct: 494 QQSDGFENAAKLMPPNY------STKEILPELS-----GKLMVLDCLLASIKTTTKDKIV 542
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
L S + LD+ EK ++ Y++ RLDG+ R +VD FN S +F++S++AGG
Sbjct: 543 LVSNYTQTLDLFEKLCHKRSYNYVRLDGTMTIKKRSKVVDKFNDENSNDFIFMLSSKAGG 602
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVY 655
GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ G++EE ++ RQ +
Sbjct: 603 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQAH 656
Query: 656 KQQLSNIAV 664
K+ LS+ V
Sbjct: 657 KKALSSTVV 665
>gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Ailuropoda melanoleuca]
Length = 838
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 281/546 (51%), Gaps = 70/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 244 LRPHQREGVKFLWECVTSRRVPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECRPEID 303
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 304 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 354
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 355 ARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 414
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 415 SGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 474
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL-QLPEIQCLINKDL 420
L +++ + L+RRT + + + K + VV C ++ LQ Y+R L Q + L +
Sbjct: 475 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKM 533
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S S +T L+++ NH LI +E D
Sbjct: 534 SVSSLSSITL---------------------------LKKLCNHPALIYDKCVEEED--- 563
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK-GDKILLFS 539
E A +F P G + LS GKM L+ ++ S+ DK++L S
Sbjct: 564 -GFEGALEIFPP------GYSSKALEPQLS-----GKMLVLDYILAVTRSRSSDKVVLVS 611
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ EK + Y + RLDG+ R +V+ FN+ S VF++S++AGG GL
Sbjct: 612 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGL 671
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+
Sbjct: 672 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 731
Query: 659 LSNIAV 664
LS+ V
Sbjct: 732 LSSCVV 737
>gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa]
gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa]
Length = 755
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 282/555 (50%), Gaps = 66/555 (11%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFG 181
I V ++ L HQREGVKF+Y + HG I+ D+MGLGKT+Q I + +
Sbjct: 132 IVVDPMLSAILRPHQREGVKFMYDCVTGVRIPSAHGCIMADEMGLGKTLQCITLMWTLLR 191
Query: 182 KDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILE 239
+ + T+ K +I+CPSS+++NW+ E +W N +D I
Sbjct: 192 QGPDAKPTLNK---------AVIVCPSSLVKNWDKEIRKWLGGRVNALPVDSGGKDEIDR 242
Query: 240 KLEA--------CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
LE C VLI S++++R+H SIL + ++I DE HRLKN ++ Y A
Sbjct: 243 NLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHRLKNSDNQTYQALF 302
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
LK R+ ++GT +QN ++E Y+L ++V PG LGT F+ ++ + G+ A +
Sbjct: 303 GLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENIILRGRDADATDAQ 362
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
D + +++ + ++RRT +L + K + ++ C +++LQ++ YR+L+
Sbjct: 363 REKGDAALTEMSSIVSRCVIRRTSALLTKYLPV-KYELIICCKLTELQEKLYRQLIS--- 418
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
S G E D + G L + L+++ NH +LI
Sbjct: 419 ---------TFSMGGKQKVTEG----DKITG-------TALSFITNLKKLCNHPQLI--- 455
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-AS 530
++ K+ + E +F + G +F GKM+ L+ L+ + +
Sbjct: 456 -FNKCQKKEEGFEGCLKLFPGEF----GRKFEPAF--------SGKMKVLDYLLAATRTT 502
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DK +L S + +D + + Y + RLDG+ R LV+ FN S + VFL+
Sbjct: 503 TNDKFVLVSNYTQTIDAFVELCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPKSVEYVFLL 562
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG GLNL+ ANR+++FDP+WNPA D QA R +R GQ+++ ++RLL++GS+EE +
Sbjct: 563 SSKAGGCGLNLIGANRLIMFDPDWNPANDDQAMARVWRDGQRKNCFIYRLLASGSIEEKM 622
Query: 650 YTRQVYKQQLSNIAV 664
+ RQ +K+ LS+ +
Sbjct: 623 FQRQAHKKALSSCVI 637
>gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 961
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 320/666 (48%), Gaps = 71/666 (10%)
Query: 19 PSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVE 78
P + S+ SV + + +I RR + + + + + N + P+ R K P++
Sbjct: 199 PISVSRIGSVRKPDATKPAVIGRR---VEVREAEEAVKKVLNVAAPKSIATNSRFKNPLK 255
Query: 79 KSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLL 138
+ +V K ++ + +Q G P + KD + + V + L
Sbjct: 256 EDSVL--PSKPNKEVTPRHDPNQPGAIVMKR-----PESVPKDKQIVDVVVDPLLGKHLR 308
Query: 139 EHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
EHQREGVKFLY+ N G IL D+MGLGKT+QTIA L + ++ I
Sbjct: 309 EHQREGVKFLYECVMGMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNP-----IYGA 363
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLE-ACGVEVLIT 251
+ V KK LI+CP ++I+NW+ EF +W + ++ + M L V+I
Sbjct: 364 SPVVKKA--LIVCPVTLIKNWQKEFRKWLGNDRLGVFVADGKHMRLTDFTMGMSYNVMII 421
Query: 252 SFDSYR-IHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
++ R + + +IVI DE HRLK ++K A L T RI L+GT +QN +
Sbjct: 422 GYERLRTVQEELAKGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDL 481
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E + + D+V PG LGT + F + ++ P+ ++ A ++ I + R + L + K++
Sbjct: 482 SEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFI 541
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT + HL K + ++FC + Q YR ++ P Q + + S L
Sbjct: 542 LRRTADILSKHL-PPKTEYILFCNPTPAQANIYRHVIASPIFQSALG-----NSESALQL 595
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
+ K+L C+S P L L L LI P P+ R F
Sbjct: 596 ITILKKL-----CNS-PSLLTLKVLKDENPNCTISSLISTLP---PNLLRH--------F 638
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYSVRMLDILE 549
P S GK+R L++L+++ ++ +KI+L S L++L
Sbjct: 639 SP--------------------ASSGKIRVLDQLLHNLHSTTSEKIVLVSNYTSTLNLLA 678
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVV 607
L + RLDGSTP++ RQ LVDDFN S SK FL+S +AGG+GLNL A+R+V
Sbjct: 679 ALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAKAGGIGLNLTGASRLV 738
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
+FD +WNPA D+QA R R GQKRH ++R+L G LEE ++ RQV K L++ + K
Sbjct: 739 LFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKLGLADSVMDQK 798
Query: 668 LEKRYF 673
+F
Sbjct: 799 NSVAHF 804
>gi|427792539|gb|JAA61721.1| Putative chromodomain-helicase dna-binding protein, partial
[Rhipicephalus pulchellus]
Length = 1710
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 275/547 (50%), Gaps = 64/547 (11%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
Q +N +L E+Q +G+++L LY N GIL D+MGLGKTIQTIA + + K +
Sbjct: 881 QATLMVNGKLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAVITYLMEKKRIN- 939
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHG-PN-RDMILEKLEAC 244
G LII P S + NW +EF RW+ V + Y G PN R + ++L +
Sbjct: 940 ------------GPYLIIVPLSTLSNWMLEFDRWAPSVVKVAYKGSPNLRRQLSQQLRSS 987
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLY-MACLELKTRNRIGLTG 303
VLIT+++ ++L+++ W+ +I+DE HR+KN KL + +R+ LTG
Sbjct: 988 KFNVLITTYEYVIKDKAVLAKIRWKYMIIDEGHRMKNHHCKLTQILNTHYSAPHRLLLTG 1047
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLK-HGQRLTAPERFIRIADERKQHL 362
T +QNK+ EL+ L +++ P + F ++++ P G+++ E + R L
Sbjct: 1048 TPLQNKLPELWALLNFLLPSIFKSCNTFEQWFNAPFATTGEKVELNEEETILIIRR---L 1104
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
VLR +LLRR K+E L K + VV C MS LQ+ YR + K +
Sbjct: 1105 HKVLRPFLLRRLKKEVESQL-PEKVEYVVKCDMSALQRLLYRHMQ---------TKGVLL 1154
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+ GS + ++ +++L++I NH + + E
Sbjct: 1155 TDGSEKDKKGKGG------------TKTLMNTIMQLRKICNHPFMFQ---HIEEAYAEHI 1199
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
S V GPD+ + GK L++++ SK ++LLF
Sbjct: 1200 GCTGSIVQGPDL-----------------YRVSGKFELLDRILPKLRSKQHRVLLFCQMT 1242
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
++ I+E +L +GY + RLDG+T + R L++ FN+ S +FL+STRAGGLGLNL
Sbjct: 1243 TLMTIMEDYLTYRGYRYLRLDGTTKAEDRGQLLEMFNAKDSPYFIFLLSTRAGGLGLNLQ 1302
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V+IFD +WNP QDLQAQDR+ R GQK V V RL++ S+EE + YK L
Sbjct: 1303 AADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLVTVNSVEERILAAAKYKLNLDE 1362
Query: 662 IAVSGKL 668
+ +
Sbjct: 1363 KVIQAGM 1369
>gi|255718303|ref|XP_002555432.1| KLTH0G09196p [Lachancea thermotolerans]
gi|238936816|emb|CAR24995.1| KLTH0G09196p [Lachancea thermotolerans CBS 6340]
Length = 1308
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 283/547 (51%), Gaps = 72/547 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + T LK
Sbjct: 457 VGGTLKEYQVRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLI------------TYLK 504
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PN-RDMILEKLEACGVEVL 249
+ K + G L+I P S I NW +EF +W+ + +Y G PN R + ++ EVL
Sbjct: 505 EAK-SEPGPFLVIVPLSTITNWTLEFEKWAPSLATVVYKGTPNQRKSMQHQIRTGNFEVL 563
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ S+L++ +W +I+DE HR+KN +SKL + +TRNR+ LTGT +QN
Sbjct: 564 LTTYEYIIKDRSLLAKHDWSHMIIDEGHRMKNAQSKLSFTLTRYYRTRNRLILTGTPLQN 623
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQRLTAPERFIRIADERKQHLVAVL 366
+ EL+ L ++V P + + F E+++ P + GQ + R+ H VL
Sbjct: 624 NLPELWALLNFVLPKIFNSAKTFDEWFNTPFANTGGQEKLELTEEETLLVIRRLH--KVL 681
Query: 367 RKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGS 426
R +LLRR K+E + + K + VV C +S LQ + Y+++L+ + L G+
Sbjct: 682 RPFLLRRLKKE-VEKDLPDKVEKVVKCKLSGLQHQLYQQMLK--------HNALFFGAGT 732
Query: 427 PLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELA 486
K L+N +++L++I NH
Sbjct: 733 EGATKGGIKGLNN--------------KIMQLRKICNH---------------------- 756
Query: 487 SAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
VF ++ N + + GK L++++ + + G ++L+F +++D
Sbjct: 757 PFVFDEVEGIINPTRGNSPLL----YRVAGKFELLDRILPKFKATGHRVLMFFQMTQVMD 812
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL + + RLDG+T + R ++ FN+ S+ FL+STRAGGLGLNL +A+
Sbjct: 813 IMEDFLRMRDLKYLRLDGATKTEERTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADT 872
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 873 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERALQKLDIDGKVIQ 932
Query: 665 SGKLEKR 671
+GK + +
Sbjct: 933 AGKFDNK 939
>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 937
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 181/573 (31%), Positives = 284/573 (49%), Gaps = 80/573 (13%)
Query: 113 FEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGG------ILGDDMGL 166
++P + + P++ P ++ +L HQR+GV+F++ GG IL DDMGL
Sbjct: 270 YQPRDMLSENNIPVVVDPI-LSAKLRPHQRQGVQFMFDCLLGFRGGYKGNGCILADDMGL 328
Query: 167 GKTIQTIAFLAAVFGKDESSDSTILKD--NKVDKKGYVLIICPSSVIQNWEIEFSRW--- 221
GK+IQ IA L T+LK N + +I+ PSS++ NW E +W
Sbjct: 329 GKSIQAIAILW-----------TLLKQGPNGLPTAERAVIVAPSSLVGNWCKELKKWLGE 377
Query: 222 ----STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIH-GSILSEVNWEIVIVDEA 276
S +G R L +LE +VL+ S+D RI+ I+ + +VI DE
Sbjct: 378 GIKPVAIGGSTKYGRAR---LAELELGTKDVLVISYDQLRIYCEEIIKISSIGLVICDEG 434
Query: 277 HRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYD 336
HRLKN + K A + T R+ L+GT +QN + E + + ++V PG L F+ YD
Sbjct: 435 HRLKNPEIKTTKAVSMIPTPRRVILSGTPIQNDLNEFFAMVNFVNPGVLKNMSTFQNVYD 494
Query: 337 EPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMS 396
P+ + A + R+ ER L + ++++LRRT + +L K + VF +S
Sbjct: 495 APILASRNPDASDEDKRLGRERSAELTRLTQQFILRRTAAVNVQYLPK-KIEYTVFIKLS 553
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
LQ + Y+ L+ + Q N S PL + K+L N CP + LP
Sbjct: 554 PLQHKIYKHLVDTIKNQQFGN----FSGALPL--ITTLKKLTN------CPELIYLPDKE 601
Query: 457 KLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCG 516
Q+++ + + P E VF P + G
Sbjct: 602 DPTQVNDSVLKLFPK------------EWNPKVFQP--------------------QYSG 629
Query: 517 KMRALEKLMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLV 575
K++ ++KL+ + D++++ S + L +L + +GY F +LDGST + RQ +V
Sbjct: 630 KLQFVDKLLAGIRKTSKDRVVIISNYTQTLTVLAGMMRTRGYEFFQLDGSTSVDNRQKMV 689
Query: 576 DDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRH 633
D FN PS+ VFL+S++AGG+GLNL+ AN +V++DP+WNPA DLQA R +R GQK+
Sbjct: 690 DLFND-PSRNEFVFLLSSKAGGVGLNLIGANHLVLYDPDWNPANDLQAMARVWREGQKKV 748
Query: 634 VIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSG 666
V ++R LS G++EE ++ RQ+ K LS V G
Sbjct: 749 VSIYRTLSTGTIEEKIFQRQITKMALSTSVVEG 781
>gi|320164135|gb|EFW41034.1| smarca2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1466
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 286/581 (49%), Gaps = 63/581 (10%)
Query: 101 QLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASIN-CRLLEHQREGVKFLYKLYKNKHGGI 159
++ + +H G L+ + PI + P + +L E+Q +G+++L LY N GI
Sbjct: 537 EVNAYAAEHQGDKSSFSLAHNIREPITEQPTMLEFGKLKEYQLKGLEWLVSLYNNNLNGI 596
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
L D+MGLGKTIQTI+ +A + K + G L++ P SV+ NW++EF
Sbjct: 597 LADEMGLGKTIQTISLIAYLIEKKQ-------------MMGPYLVVVPLSVLSNWQLEFE 643
Query: 220 RWSTFNVS-IYHG--PNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEA 276
RW+ V +Y G R + + VL+T++D ++LS V W+ VIVDE
Sbjct: 644 RWAPSIVKHVYKGSPAARRALHPIIRGGKFNVLLTTYDYIVRDKNVLSRVAWKYVIVDEG 703
Query: 277 HRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
HR+KN KL + NR+ L+GT +QN + E++ L +++ P + ++F +++
Sbjct: 704 HRVKNHSGKLNTVLTQYFPAPNRLLLSGTPLQNNLPEMWALLNFLLPTIFNSVDNFEQWF 763
Query: 336 DEPLKHGQ---RLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVF 392
+ P + L+ E + I R+ H +LR +LLRR K E L K + VV
Sbjct: 764 NAPFANTTEKVELSGEESILII---RRLH--KILRPFLLRRLKREVESQL-PDKVEYVVK 817
Query: 393 CTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVL 452
C MS LQK Y ++ + +D S L Q R ++
Sbjct: 818 CGMSQLQKTMY-SFVKRKGVLLTSAQDTDPSAAKKLQQKPTGVR-------------VLA 863
Query: 453 PCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L++L++I NH L + R S G GG S + V
Sbjct: 864 HTLMQLRKICNHPFLFETLERG-----------VSRHMG-----FGGAIITGSLV----V 903
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
++ GK ++L+ G ++LLFS + L ILE + + RLDG+T + R
Sbjct: 904 RASGKFEMFDRLLTKLHRTGHRVLLFSQMTQCLTILEDYCNYNNILYLRLDGNTKPDERA 963
Query: 573 SLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQK 631
L+ FN+ S +FL+STRAGGLGLNL +A+ VVIFD +WNP QDLQAQDR+ R GQK
Sbjct: 964 ELLTKFNAPNSPYNLFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQK 1023
Query: 632 RHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKLEKR 671
V V R ++A S+EE + +K + + +GK +++
Sbjct: 1024 NEVRVIRFVTADSVEERMLAAAQFKLDMDKKVIQAGKFDQK 1064
>gi|449301382|gb|EMC97393.1| hypothetical protein BAUCODRAFT_68199 [Baudoinia compniacensis UAMH
10762]
Length = 1411
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 289/551 (52%), Gaps = 82/551 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
I L E+Q +G++++ LY N GIL D+MGLGKTIQTI+ + + K
Sbjct: 540 IGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQF------ 593
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILEKLEACGVEVL 249
G L+I P S + NW EF +W+ + +Y GP R +++ +VL
Sbjct: 594 -------GPYLVIVPLSTLTNWNSEFEKWAPSVKRIVYKGPPNQRKNQQQQIRYGDFQVL 646
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLEL-KTRNRIGLTGTIMQN 308
+T+++ +LS+V W +IVDE HR+KN SKL + TR R+ LTGT +QN
Sbjct: 647 LTTYEFIIKDRPVLSKVKWLHMIVDEGHRMKNAGSKLSSTITQYYHTRYRLILTGTPLQN 706
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ L E+ + I + L
Sbjct: 707 NLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDNMSLNEEEQLLVI-----RRLH 761
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ + + K++ V+ C MS LQ + Y++L+ +I ++N D
Sbjct: 762 KVLRPFLLRRLKKD-VEKDLPDKQERVIKCNMSALQAKLYKQLVTHNKI--MVNDDKGRK 818
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
G + L N+ L++L+++ NH P +E ++Q A
Sbjct: 819 TG--------MRGLSNM--------------LMQLRKLCNH-----PFVFEEVEEQMNPA 851
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVR 543
+L + DL+ ++ GK L++++ + G ++L+F +
Sbjct: 852 KLTN-------DLIW--------------RTAGKFELLDRILPKFEKTGHRVLMFFQMTQ 890
Query: 544 MLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVF--LISTRAGGLGLNLV 601
+++I+E ++ + + RLDGST ++ R L+ FN+ P+ +F L+STRAGGLGLNL
Sbjct: 891 IMNIMEDYMRLRNMKYLRLDGSTKADDRSDLLKVFNA-PNSDIFCFLLSTRAGGLGLNLQ 949
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
+A+ V+IFD +WNP QDLQAQDR+ R GQK V + RL++ GS+EE + R +K +
Sbjct: 950 TADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITTGSVEEKILERAQFKLDMDG 1009
Query: 662 IAV-SGKLEKR 671
+ +GK + +
Sbjct: 1010 KVIQAGKFDNK 1020
>gi|194381160|dbj|BAG64148.1| unnamed protein product [Homo sapiens]
Length = 863
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 226/413 (54%), Gaps = 51/413 (12%)
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
+S +W VI+DE H+++N + + +AC + +T +RI L+G+ MQN + EL++LFD++ P
Sbjct: 5 ISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFP 64
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LGT F E + P+ G A ++ A + L + YLLRR K + L
Sbjct: 65 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 124
Query: 383 MM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
+ K + V+FC ++D Q + Y+ + E+ ++N ++ G
Sbjct: 125 SLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSG---------------- 168
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
L+ L++I NH +L P++ K D EL FG
Sbjct: 169 -------------LIALRKICNHPDLFSGGPKNL--KGLPDDELEEDQFGY--------- 204
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
K GKM +E L+ W +G ++LLFS S +MLDILE FL + Y++ +
Sbjct: 205 ----------WKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLK 254
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
+DG+T RQ L+ +N S VFL++TR GGLG+NL ANRVVI+DP+WNP+ D QA
Sbjct: 255 MDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 314
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 315 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFK 367
>gi|323454552|gb|EGB10422.1| hypothetical protein AURANDRAFT_10276, partial [Aureococcus
anophagefferens]
Length = 505
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 170/567 (29%), Positives = 276/567 (48%), Gaps = 77/567 (13%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+ + A+ RL HQR V +L+ L+ GGI+GD+MGLGKT Q AFL A+
Sbjct: 6 LWIRATTQRRLFPHQRRAVSWLWALHGEGCGGIVGDEMGLGKTAQVGAFLGALADGPRGP 65
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACG 245
D + D LI+ P++++ +W E W+ V + H ++ E
Sbjct: 66 D-------RFDVCRSALILAPTTMLSHWVRELHAWAPRARVVVLH--RSSARFDEAETPS 116
Query: 246 VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
+ + S+D+ L V W ++DE +L+N S++ C L+T R+ L+GT
Sbjct: 117 CVLCVASYDAVHRLADALLAVPWSYAVLDEGQKLRNPDSRVTQLCKRLRTPRRLLLSGTP 176
Query: 306 MQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
+QN + EL++LFD+ PG LGT + F + +P++ G A +++A L +
Sbjct: 177 VQNSLRELWSLFDFAVPGRLGTLKAFDQELAQPIRAGGFAGARPAQVQLAYRCAVALRDL 236
Query: 366 LRKYLLRRTKEETI-----GHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
++ YLLRRTK G + K ++V+ C +S Q YR +L +++
Sbjct: 237 IQPYLLRRTKAALTAAGDSGVALPPKTEHVLLCALSQDQIDLYRHVLDGDDVR------- 289
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
K L G + F + L++I NH +L +
Sbjct: 290 --------------KALAGDGGQQATAF----RAIAALRKICNHPDLYGGP---PEGEPP 328
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
A +S + D LV AQ G ++L+FS
Sbjct: 329 GAASRSSKLAALDAVLVRWKAQ-----------------------------GHRVLVFSQ 359
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNL 600
++ MLD+LE ++ +G+ + R+DG T RQ+ D FN+S + L++TR GG+GL+L
Sbjct: 360 TIAMLDVLEALVVARGWRYGRMDGGTAPAARQATADAFNASSKTFLMLLTTRTGGVGLSL 419
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
V A+RVV++DP+WNP D QA++RS+R GQ + V ++RL+ AG++EE +Y RQ++KQ L+
Sbjct: 420 VGADRVVLYDPDWNPQTDAQARERSWRLGQTKPVTIYRLVCAGTIEEKIYHRQIFKQALT 479
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGELF 687
N +S ++R F + GELF
Sbjct: 480 NKVLSDAKQRRLFS-----QSELGELF 501
>gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina
98AG31]
Length = 823
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 300/612 (49%), Gaps = 101/612 (16%)
Query: 86 EEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLV----LSKDGEY-PIIQVPASINCRLLE- 139
EE E+E + KF Q GP + L +++ GE PI +VP ++ RL +
Sbjct: 188 EEVEQELARLKFEEEQ-------RKGPHKSLAALLGIAQKGETKPIKKVPVVLDPRLTKT 240
Query: 140 ---HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
HQ EGVKFLY+ + K HG I+ D+MGLGKT+Q I L T+L
Sbjct: 241 LRPHQVEGVKFLYRCTTGMVEKGVHGCIMADEMGLGKTLQCITLLW-----------TLL 289
Query: 192 KDNKVDKKGYV---LIICPSSVIQNWEIEFSRWSTFNVSIYHGPN------------RDM 236
K + + K + ++ CPSS+++NW E +W + + R
Sbjct: 290 KQSPIPGKPAINKAIVACPSSLVKNWANELDKWLGAGALVPLAVDGKQSKADLLKSVRQW 349
Query: 237 ILEKLEACGVEVLITSFDSYRIHGSILSEVNWE---IVIVDEAHRLKNEKSKLYMACLEL 293
+L V+I S+++ R GS++ E+ +++ DE HRLKN +++ Y A +
Sbjct: 350 VLADGRRVSQPVMIVSYETLR--GSLVEELGTAPIGLLLCDEGHRLKNAENQTYAALNSI 407
Query: 294 KTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIR 353
K R+ LTGT +QN + E + L ++ P LG R FR+ Y+ P+ G+ + + +
Sbjct: 408 KCEKRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKNYELPILRGRDSDSSQSEVT 467
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
+A+ + + L ++K+++RRT + +L + K ++VVFC S Q+ YR + P+++
Sbjct: 468 LAETKLKELTTKVQKFIIRRTNDLLSKYLPV-KYEHVVFCAPSTFQRDLYRHFINSPDLK 526
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
L+ G C L L L+++ NH +L+
Sbjct: 527 KLLR-----GVG-----------------------CQPLKMLGILRKLCNHPDLL----- 553
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
+L + G + G +S + + GKM LE++ D
Sbjct: 554 ----------DLHQDIPGSEKCFPEGYTSKDSR-APARPELSGKMVVLERIR---TQTTD 599
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
KI+L S + LD++EK + + RLDG+ RQ LVD FN+ K+ +FL+S++
Sbjct: 600 KIVLISNFTQTLDVMEKMCRERRWGCLRLDGTMQITKRQKLVDRFNNPEGKEFIFLLSSK 659
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R + GS+EE V+ R
Sbjct: 660 AGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKECFVYRFILTGSVEEKVFQR 719
Query: 653 QVYKQQLSNIAV 664
Q K +LS V
Sbjct: 720 QSQKMKLSASVV 731
>gi|410057731|ref|XP_003954270.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan troglodytes]
Length = 863
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 226/413 (54%), Gaps = 51/413 (12%)
Query: 263 LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAP 322
+S +W VI+DE H+++N + + +AC + +T +RI L+G+ MQN + EL++LFD++ P
Sbjct: 5 ISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFP 64
Query: 323 GSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHL 382
G LGT F E + P+ G A ++ A + L + YLLRR K + L
Sbjct: 65 GKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSL 124
Query: 383 MM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLD 441
+ K + V+FC ++D Q + Y+ + E+ ++N ++ G
Sbjct: 125 SLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSG---------------- 168
Query: 442 GCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNA 501
L+ L++I NH +L P++ K D EL FG
Sbjct: 169 -------------LIALRKICNHPDLFSGGPKNL--KGLPDDELEEDQFGY--------- 204
Query: 502 QNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSR 561
K GKM +E L+ W +G ++LLFS S +MLDILE FL + Y++ +
Sbjct: 205 ----------WKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLK 254
Query: 562 LDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQA 621
+DG+T RQ L+ +N S VFL++TR GGLG+NL ANRVVI+DP+WNP+ D QA
Sbjct: 255 MDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 314
Query: 622 QDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 315 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFK 367
>gi|354465712|ref|XP_003495321.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Cricetulus griseus]
gi|344238589|gb|EGV94692.1| Chromodomain-helicase-DNA-binding protein 2 [Cricetulus griseus]
Length = 1827
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 287/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSSHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIK +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKAPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N + S ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF+++
Sbjct: 940 IQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEI 983
>gi|148692894|gb|EDL24841.1| mCG6355 [Mus musculus]
Length = 1330
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 248/487 (50%), Gaps = 73/487 (14%)
Query: 195 KVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEKLEACGVEV 248
K + G +I+CP++V+ W EF + W F V++ H ++ ++ + C V
Sbjct: 482 KFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRDIVYCH-GV 540
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
LITS+ R+ +S +W VI+DE H+++N + + +AC QN
Sbjct: 541 LITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLAC---------------KQN 585
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL++LFD++ PG LGT F E + P+ G A ++ A + L +
Sbjct: 586 NLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINP 645
Query: 369 YLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
YLLRR K + L + K + V+FC ++D Q + Y+ + + ++N + G
Sbjct: 646 YLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSG-- 703
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
LV L++I NH +L P++
Sbjct: 704 ---------------------------LVALRKICNHPDLFSGGPKN------------- 723
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
GP D + + E F + GKM +E L+ W +G ++LLFS S +ML I
Sbjct: 724 -ASGPPEDEL----EEEQF---GHWRRSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHI 775
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
LE FL YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+NL ANRV+
Sbjct: 776 LEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLTGANRVI 835
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+N +
Sbjct: 836 IYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 895
Query: 668 LEKRYFE 674
++R+F+
Sbjct: 896 KQRRFFK 902
>gi|400599277|gb|EJP66981.1| SNF2 family domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1654
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 275/575 (47%), Gaps = 64/575 (11%)
Query: 119 SKDGEYPIIQVPASINCRLLEHQREGVKFLY----KLYKNKHGGILGDDMGLGKTIQTIA 174
SK + I + I+ R+ EHQ EGV+FL+ + + G +L MGLGKT+QTI
Sbjct: 753 SKANDQGFIYIHPEISSRIKEHQIEGVRFLWNHIVRDSSERQGCLLAHTMGLGKTMQTIT 812
Query: 175 FLAAVFGKDESSDSTILKDNKVDKKGY-VLIICPSSVIQNWEIEFSRWS-------TFNV 226
FL A+ S D T+ D + + VL++CPS +++NW+ EF W+ F V
Sbjct: 813 FLVALRESALSDDLTVRDQIPQDLRDWKVLVLCPSGLVENWKDEFLIWAPKHLMEAIFTV 872
Query: 227 SIYHGPNRDMILEKLEACGVEVLITSFDSYRIH-----------GSILSEVNWEIVIVDE 275
H P + + K A +LI ++ ++ IL E N +VI DE
Sbjct: 873 EAVHSPLQRVENAKEWAVRGGILIIGYNMFKSEFRKGNEKTVTVDRILVE-NARVVIADE 931
Query: 276 AHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFY 335
AH LKN K+K+ +LKT RI LTG+ + N + E Y + +WVAP LG + FR+ Y
Sbjct: 932 AHSLKNPKTKITQVASDLKTSTRIALTGSPLANNVEEYYAMINWVAPNFLGPLQEFRDMY 991
Query: 336 DEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTM 395
P+ G + R A + Q L + R T + + + KE+ V+
Sbjct: 992 ATPIHQGLYNDSTPYEKRKAIKLLQVLKTTAAPKVHRATMKSCLKDELPPKEEFVISVPP 1051
Query: 396 SDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL 455
+++Q++ Y +Q + G + Q
Sbjct: 1052 TEIQRKLYDLYMQATH-----------NSGDKVEQ------------------------- 1075
Query: 456 VKLQQISNHLELIKPNP---RDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDV 512
L + NHL LI +P R + R+ E+ V +D + S GL V
Sbjct: 1076 ATLFGVLNHLALICAHPAVYRKHVIELRRKGEMGKDVARFPMDTIPQIMNMTSDPGLGRV 1135
Query: 513 KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQ 572
+ K+ L K++ + GDK+L+FS S+ LD L K + F RLDGST + RQ
Sbjct: 1136 ELSYKVELLNKILDQSSRMGDKVLVFSQSIPTLDYLAKLFGSQKRRFCRLDGSTQISKRQ 1195
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
+V FN S++V+LIST AGG+GLN+ ANRVVIFD +NP D QA R++R GQ +
Sbjct: 1196 DMVKSFNKG-SEEVYLISTNAGGVGLNIFGANRVVIFDFKYNPVSDQQAIGRAYRIGQTK 1254
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
V V+R + AGS E+ + + V+K QL++ V K
Sbjct: 1255 PVFVYRFVVAGSFEDDLQNKAVFKMQLASRVVDQK 1289
>gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
Length = 999
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 208/663 (31%), Positives = 319/663 (48%), Gaps = 83/663 (12%)
Query: 18 FPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQ-LQRLGE--TYNFSLPQQNPETRREK 74
+P + SS+S S + I R PP++ + ++ Q GE N + P+ +
Sbjct: 194 YPRDSGPMSSISSAISTNGTI--RLPPRTKIKRENGQNEGEKRPLNIAAPRSYATKNAFR 251
Query: 75 APVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPF-----EPLVLSKDGEYPIIQV 129
P+++S V E RH D T P P ++ K + + +
Sbjct: 252 NPLKESTVL----VEISPSGNPVPRH-------DPTAPGAVIMKRPTLVPKGKQVVDVVL 300
Query: 130 PASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
+ L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++
Sbjct: 301 DPLLGKHLREHQREGVKFLYECVMGMRAFNGEGAILADEMGLGKTLQTIALIWTLLKQNP 360
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLE 242
I + V KK LI+CP ++I NW EF +W + ++ R + +
Sbjct: 361 -----IYEAQPVVKKA--LIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTRLTDFTM 413
Query: 243 ACGVEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+I ++ R LS+ +IVI DE HR++ ++K A L T RI L
Sbjct: 414 GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSRRIIL 473
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + D+V PG LGT + F + ++ P+ ++ A ++ I + R +
Sbjct: 474 SGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEARSEE 533
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++LRRT + + + K + V+FC + QK YR +L P Q
Sbjct: 534 LANLTSLFILRRT-ADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQ-------- 584
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
S L E +L + L+++ N L+ P DE
Sbjct: 585 ----SALGNSESALQL-----------------ITILKKLCNSPSLLNPRNCDETPNSTL 623
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSY 540
A ++S P+I LS S GK+R L++L+++ + +K++L S
Sbjct: 624 SALVSS--LPPNI-----------LRHLSP-SSSGKIRVLDQLLHNIRHTTSEKVVLISN 669
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGL 598
LD+L L F RLDGSTP++ RQ LVDDFN S S V FL+S +AGG GL
Sbjct: 670 YTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGL 729
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ A+R+V+FD +WNPA D+QA R R GQKRH ++RLL G+LEE ++ RQV K
Sbjct: 730 NLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIG 789
Query: 659 LSN 661
L++
Sbjct: 790 LAD 792
>gi|409045739|gb|EKM55219.1| hypothetical protein PHACADRAFT_173301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 799
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 288/572 (50%), Gaps = 81/572 (14%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
+VP I+ RL + HQ EGV+F++K + ++++G I+ D+MGLGKT+Q + +
Sbjct: 201 KVPVVIDPRLGKVLRPHQIEGVQFMFKATTGMIVEHQYGCIMADEMGLGKTLQCLTLMWT 260
Query: 179 VFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPN-- 233
+ + + + + V+I CP+S+++NW E +W + G +
Sbjct: 261 LLKQSPHAGRSTAE--------RVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGTDNL 312
Query: 234 ----RDMILEKLEACGVEVLITSFDSYRIHGSI---LSEVNWEIVIVDEAHRLKNEKSKL 286
R + + C VLITS++ R G + E+ +++ DE HRLKN +SK
Sbjct: 313 GKARRWIEQPRGRNCTNPVLITSYEYLRTLGESYPSICEMEIGLLLCDEGHRLKNTESKT 372
Query: 287 YMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLT 346
+ LK + R+ LTGT +QN + E ++L + P LGTR FR+ ++ + G+
Sbjct: 373 WQVLSTLKAKRRVILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKNFENAIIRGRDAD 432
Query: 347 APERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRL 406
A + ++++ + L A++ K+++RRT + +L + K ++VVFC MSD+Q+ Y
Sbjct: 433 ASDAVREKSEQKLKDLAALVSKFIIRRTNDLLSKYLPV-KYEHVVFCHMSDIQRDMYCHF 491
Query: 407 LQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLE 466
+ P+ + +L PL + K+L N P L+ + + + H E
Sbjct: 492 VDHPQTKT----ELRGKEAKPLVAINILKKLVNH------------PELLPIGKETKHAE 535
Query: 467 LIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEKL 524
+KDAE + + DV + GK LE+
Sbjct: 536 W----------DNKKDAEKE--------------------MEMRDVHTEWSGKFLVLERF 565
Query: 525 MYSWASK-GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPS 583
+ + DKI+L S LD+ EK L K Y + RLDG RQ +VD FN+
Sbjct: 566 LDKMRQETNDKIVLISNYTSTLDVFEKLLRAKRYGYFRLDGKMNVKKRQEVVDKFNNPEV 625
Query: 584 KQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSA 642
+ VFL+S++AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R +
Sbjct: 626 PEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKECFVYRFICT 685
Query: 643 GSLEELVYTRQVYKQQLSNIAVSGKLE-KRYF 673
G++EE V+ RQ KQ LS+ V K + +R+F
Sbjct: 686 GTIEEKVFQRQAQKQSLSSAVVDEKEDVERFF 717
>gi|332808861|ref|XP_513146.3| PREDICTED: DNA repair and recombination protein RAD54-like isoform
2 [Pan troglodytes]
Length = 747
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 281/545 (51%), Gaps = 68/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 153 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEID 212
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 213 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 263
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 264 ARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L +++ + L+RRT + + + K + VV C ++ LQ Y+R
Sbjct: 384 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRF--------------- 427
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
L Q + + L +S L + L+++ NH LI +E D
Sbjct: 428 ------LRQAKPAEEL-----LESKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDG--- 473
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSY 540
F +DL +++ + + GKM L+ ++ S+ DK++L S
Sbjct: 474 --------FVGALDLFPPGYSSKAL----EPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ EK + Y + RLDG+ R +V+ FNS S VF++S++AGG GLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 660 SNIAV 664
S+ V
Sbjct: 642 SSCVV 646
>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
Length = 819
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 289/573 (50%), Gaps = 80/573 (13%)
Query: 128 QVPASINCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAA 178
QVP ++ +L + HQ EGVKF+Y+ + + +G I+ D+MGLGKT+Q I +
Sbjct: 159 QVPVVLDPKLAKILRPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLMWT 218
Query: 179 VFGKD-ESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNV----SIYHGPN 233
+ + E+ TI K +++CP+S+++NW E ++W N +I +
Sbjct: 219 LLKQSPEAGKPTIQK---------AIVVCPASLVKNWANELTKWLGANAITPFAIDGKAS 269
Query: 234 RDMILEKLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSK 285
++ + +L + V+I S+++ R++ L ++ DE HRLKN S
Sbjct: 270 KEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSN 329
Query: 286 LYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRL 345
+ A L R+ LTGT +QN + E ++L + P LG+R FR+ ++ P+ G+
Sbjct: 330 TFNALNSLDVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDA 389
Query: 346 TAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRR 405
A E + DE L+ ++ K+L+RRT + +L + K ++VVFC++S Q Y
Sbjct: 390 DASESDRQRGDECTAELLGIVNKFLIRRTNDILSKYLPV-KYEHVVFCSISPFQASLYNY 448
Query: 406 LLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHL 465
+ P+IQ L L G S P L + L+++ NH
Sbjct: 449 FITSPDIQAL------------------------LRGKGSQP----LKAINILKKLCNHP 480
Query: 466 ELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKS--CGKMRALEK 523
+L+ N D D + F P+ ++ DV+ GKM L++
Sbjct: 481 DLL--NLSD-------DLPGSECCFPPEYTPKEARGRDR------DVRPEYSGKMMVLDR 525
Query: 524 LMYSW-ASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSP 582
++ DKI+L S LD+ E+ + Y RLDG+ N RQ LVD FN
Sbjct: 526 MLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPN 585
Query: 583 SKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLS 641
++ VFL+S++AGG G+NL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R ++
Sbjct: 586 GEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 645
Query: 642 AGSLEELVYTRQVYKQQLSNIAV-SGKLEKRYF 673
G++EE ++ RQ +KQ LS+ V S + +R+F
Sbjct: 646 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHF 678
>gi|426329478|ref|XP_004025767.1| PREDICTED: DNA repair and recombination protein RAD54-like [Gorilla
gorilla gorilla]
Length = 747
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 284/545 (52%), Gaps = 68/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 153 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEID 212
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 213 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 263
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 264 ARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L +++ + L+RRT + + + K + VV C ++ LQ Y+R
Sbjct: 384 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRF--------------- 427
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
L Q + + L L+G S L + L+++ NH LI +E D
Sbjct: 428 ------LRQAKPAEEL--LEGKMSV---SSLSSITSLKKLCNHPALIHDKCVEEEDG--- 473
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSY 540
F +DL +++ + + GKM L+ ++ S+ DK++L S
Sbjct: 474 --------FVGALDLFPPGYSSKAL----EPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLN 599
+ LD+ EK + Y + RLDG+ R +V+ FNS S S VF++S++AGG GLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSSDFVFMLSSKAGGCGLN 581
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 660 SNIAV 664
S+ V
Sbjct: 642 SSCVV 646
>gi|410261060|gb|JAA18496.1| RAD54-like [Pan troglodytes]
gi|410351929|gb|JAA42568.1| RAD54-like [Pan troglodytes]
Length = 747
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 283/545 (51%), Gaps = 68/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 153 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEID 212
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 213 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 263
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 264 ARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L +++ + L+RRT + + + K + VV C ++ LQ Y+R
Sbjct: 384 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRF--------------- 427
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
L Q + + L L+G S L + L+++ NH LI +E D
Sbjct: 428 ------LRQAKPAEEL--LEGKMSV---SSLSSITSLKKLCNHPALIHDKCVEEEDG--- 473
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSY 540
F +DL +++ + + GKM L+ ++ S+ DK++L S
Sbjct: 474 --------FVGALDLFPPGYSSKAL----EPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ EK + Y + RLDG+ R +V+ FNS S VF++S++AGG GLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+ L
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 660 SNIAV 664
S+ V
Sbjct: 642 SSCVV 646
>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Komagataella pastoris CBS 7435]
Length = 838
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 299/615 (48%), Gaps = 85/615 (13%)
Query: 84 DDEEKEKEQEQEKFGRHQLGQFQFDHT------GPFEPLVLSKDG----EYPIIQVPASI 133
+D+ KEQE+ + R + Q + E L ++KDG +YP VP I
Sbjct: 182 EDDRLRKEQEELEMERKKAEQITNKNKRIKPGKSLAEILGIAKDGSSLKKYP--NVPVVI 239
Query: 134 NCRLLE----HQREGVKFLYK-----LYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
+ +L + HQ GVKFL++ + + G I+ D+MGLGKT+Q IA L + +
Sbjct: 240 DPKLAKILRPHQISGVKFLFRCTSGLVDASAKGCIMADEMGLGKTLQCIALLWTLLRQSP 299
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNR--DMILE 239
TI K +++CPSS+++NW EF +W T G + I
Sbjct: 300 RGTKTIEK---------AIVVCPSSLVKNWANEFDKWLGKGTLTPLAIDGKSAKGSTISS 350
Query: 240 KLEACGVE--------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACL 291
+L + VLI S+++ R + L +++ DE HRLKN S + A
Sbjct: 351 QLSQWAMATGRNIVRPVLIVSYETLRRNVESLKGTKVGLMLADEGHRLKNGDSLTFTALN 410
Query: 292 ELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERF 351
L R+ L+GT +QN + E ++L + PG LGTR FR+ Y+ P+ G+ A ++
Sbjct: 411 SLDCERRVILSGTPIQNDLSEYFSLLTFANPGLLGTRNEFRKNYENPILRGRDSLADDKE 470
Query: 352 IRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPE 411
D++ + L ++ ++++RRT + +L + K + V+FC +S+ QK Y+R
Sbjct: 471 REKGDQKLKELTEIVARFIIRRTNDILSKYLPV-KYEYVIFCNLSETQKSLYQRFTASKS 529
Query: 412 IQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPN 471
I L+ K++ S L + L+++ H PN
Sbjct: 530 ISKLV-KEVGGGAQS-------------------------LQSIGLLKKLCTH-----PN 558
Query: 472 PRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASK 531
+ P+ D E + D D GN +N V K L++ +Y +
Sbjct: 559 LLNLPE----DIEGCENLLPDDYDYGHGNRRNREV----QVWHSSKFLILQRFLYKINKE 610
Query: 532 -GDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
DKI++ S + LD++EK I Y RLDG+ N RQ LVD FN+ K+ VFL+
Sbjct: 611 TNDKIVIISNYTQTLDLIEKLCISSRYGSLRLDGTMNINKRQKLVDKFNNPEGKEFVFLL 670
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
S++AGG G+NL+ ANR+++ DP+WNPA D QA R +R GQ ++ ++R ++ GS+EE +
Sbjct: 671 SSKAGGCGINLIGANRLILVDPDWNPASDQQALARVWRDGQTKNCFIYRFIATGSIEEKI 730
Query: 650 YTRQVYKQQLSNIAV 664
+ RQ K QLS+ V
Sbjct: 731 FQRQSAKLQLSSCVV 745
>gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3]
Length = 989
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 208/663 (31%), Positives = 319/663 (48%), Gaps = 83/663 (12%)
Query: 18 FPSNFSQSSSVSQESSNDTLIIPRRPPKSSLAQQ-LQRLGE--TYNFSLPQQNPETRREK 74
+P + SS+S S + I R PP++ + ++ Q GE N + P+ +
Sbjct: 194 YPRDSGPMSSISSAISTNGTI--RLPPRTKIKRENGQNEGEKRPLNIAAPRSFATKNAFR 251
Query: 75 APVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPF-----EPLVLSKDGEYPIIQV 129
P+++S V E RH D T P P ++ K + + +
Sbjct: 252 NPLKESTVL----VEISPSGNPVPRH-------DPTAPGAVIMKRPTLVPKGKQVVDVVL 300
Query: 130 PASINCRLLEHQREGVKFLYKLYK-----NKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
+ L EHQREGVKFLY+ N G IL D+MGLGKT+QTIA + + ++
Sbjct: 301 DPLLGKHLREHQREGVKFLYECVMGMRAFNGEGAILADEMGLGKTLQTIALIWTLLKQNP 360
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG-PNRDMILEKLE 242
I + V KK LI+CP ++I NW EF +W + ++ R + +
Sbjct: 361 -----IYEAQPVVKKA--LIVCPVTLIDNWRKEFRKWLGNERIGVFVADAKRTRLTDFTM 413
Query: 243 ACGVEVLITSFDSYRIHGSILSE-VNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+I ++ R LS+ +IVI DE HR++ ++K A L T RI L
Sbjct: 414 GKSYSVMIIGYERLRTVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSRRIIL 473
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN + E + + D+V PG LGT + F + ++ P+ ++ A ++ I + R +
Sbjct: 474 SGTPIQNDLTEFFAMVDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEARSEE 533
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L + ++LRRT + + + K + V+FC + QK YR +L P Q
Sbjct: 534 LANLTSLFILRRT-ADILSEYLPPKTEYVLFCNPTSSQKNIYRHVLTSPVFQ-------- 584
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
S L E +L + L+++ N L+ P DE
Sbjct: 585 ----SALGNSESALQL-----------------ITILKKLCNSPSLLNPRNCDETPNSTL 623
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSY 540
A ++S P+I LS S GK+R L++L+++ + +K++L S
Sbjct: 624 SALVSS--LPPNI-----------LRHLSP-SSSGKIRVLDQLLHNIRHTTSEKVVLISN 669
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGL 598
LD+L L F RLDGSTP++ RQ LVDDFN S S V FL+S +AGG GL
Sbjct: 670 YTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKAGGTGL 729
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ A+R+V+FD +WNPA D+QA R R GQKRH ++RLL G+LEE ++ RQV K
Sbjct: 730 NLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQVTKIG 789
Query: 659 LSN 661
L++
Sbjct: 790 LAD 792
>gi|157822125|ref|NP_001100766.1| DNA excision repair protein ERCC-6 [Rattus norvegicus]
gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 (predicted) [Rattus norvegicus]
Length = 1325
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 249/487 (51%), Gaps = 73/487 (14%)
Query: 195 KVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYH-----GPNRDMILEKLEACGVEV 248
K + G LI+CP++V+ W EF + W F V+I H ++ ++ + C V
Sbjct: 481 KFEGLGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIVHCH-GV 539
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
LITS+ R+ +S +W VI+DE H+++N + + +AC QN
Sbjct: 540 LITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLAC---------------KQN 584
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL++LFD+ PG LGT F E + P+ G A ++ A + L +
Sbjct: 585 NLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINP 644
Query: 369 YLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
YLLRR K + L + K + V+FC ++D Q + Y+ + + ++N + G
Sbjct: 645 YLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSG-- 702
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
LV L++I NH +L P++ S
Sbjct: 703 ---------------------------LVALRKICNHPDLFSGGPKN-----------TS 724
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
A+ P+ L + E F K GKM +E L+ W +G ++LLFS S +ML I
Sbjct: 725 AL--PEDGL-----EEEQF---GYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLHI 774
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVV 607
LE FL YS+ ++DG+T RQ L+ +N S VFL++TR GGLG+NL ANRV+
Sbjct: 775 LEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLTGANRVI 834
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGK 667
I+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L+N +
Sbjct: 835 IYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDP 894
Query: 668 LEKRYFE 674
++R+F+
Sbjct: 895 KQRRFFK 901
>gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis]
Length = 644
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 272/536 (50%), Gaps = 53/536 (9%)
Query: 140 HQREGVKFLYKL-----YKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + ++K
Sbjct: 35 HQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKT 94
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLITSF 253
LI+ P S++ NW+ EF +W + + I+ + E +++ VLI S+
Sbjct: 95 --------LIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVLIISY 146
Query: 254 DSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMEL 313
+ + + ++++I DE HRLKN K A + L RI LTGT +QN + E
Sbjct: 147 EMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEF 206
Query: 314 YNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRR 373
+ L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + ++LRR
Sbjct: 207 FALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRR 266
Query: 374 TKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVEC 433
T +E I + K +NV+FC LQ YR+LL ++ + L SP + C
Sbjct: 267 T-QEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLLE---NSP--HLIC 320
Query: 434 CKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS--AVFG 491
L L C+ PCL+ IK DK + + +VF
Sbjct: 321 IGALKKL--CNH-------PCLL--------FNSIKEKECSTCDKNEEKSLYKGLLSVFP 363
Query: 492 PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDILE 549
D + + L K GK++ L KL+ +K++L S + L++L+
Sbjct: 364 ADYNPL-----------LFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNVLQ 412
Query: 550 KFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVI 608
+ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +++
Sbjct: 413 EVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLIL 472
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 473 YDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 528
>gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Xenopus (Silurana) tropicalis]
Length = 1809
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 288/580 (49%), Gaps = 103/580 (17%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F +L
Sbjct: 487 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLF------HLHLLY---- 536
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEACGVE 247
G L++ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 537 ---GPFLLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEWVHQQSKKMKFN 593
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
L+T+++ ++LS +NW + VDEAHRLKN+ S LY +E K+ R+ +TGT +Q
Sbjct: 594 ALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPLQ 653
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL++L ++ P E F + +HG + D Q L VL
Sbjct: 654 NSLKELWSLLHFIMPEKFECWEDFED------QHG----------KGRDNGYQSLHKVLE 697
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+LLRR K++ + + K + ++ M +QK+ YR +L
Sbjct: 698 PFLLRRVKKD-VEKSLPAKVEQILRVEMCVMQKQYYRWIL-------------------- 736
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELAS 487
+ L L +++L++ NH LIKP +E +K+ + L S
Sbjct: 737 ------TRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKP---EETEKESRLDSLQS 787
Query: 488 AVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDI 547
+ +S GK+ L+KL+ +G+++L+FS VRMLDI
Sbjct: 788 LI-----------------------RSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDI 824
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANRV 606
L ++L K Y F RLDGS LR+ +D FN+ S+ FL+STRAGGLG+NL SA+ V
Sbjct: 825 LAEYLAIKHYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV 884
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-- 664
VIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++ +
Sbjct: 885 VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQR 944
Query: 665 ---SGKLEKRYFEGVQDCKEF-QGEL-----FGICNLFRD 695
+G+ G +C F + EL FG +LF++
Sbjct: 945 MDTTGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKE 984
>gi|388851778|emb|CCF54584.1| probable SNF2-component of SWI/SNF global transcription activator
complex [Ustilago hordei]
Length = 1518
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 279/543 (51%), Gaps = 86/543 (15%)
Query: 126 IIQVPASINCRLL-EHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDE 184
I Q P ++ L ++Q +G++++ LY N+ GIL D+MGLGKTIQTI+ +
Sbjct: 593 ITQQPTILSGGTLKDYQMKGLQWMISLYNNRLNGILADEMGLGKTIQTISLI-------- 644
Query: 185 SSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PN-RDMILEKL 241
T L + K + G L+I P S + NW EF++W+ T + IY G PN R + +L
Sbjct: 645 ----TYLMEFK-KQNGPFLVIVPLSTLTNWVNEFNKWAPTVSTLIYKGTPNVRKQLTGRL 699
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKT-RNRIG 300
+ +VL+T+++ +L ++ W +I+DE HR+KN +SKL + + T R R+
Sbjct: 700 RSMNFQVLLTTYEYIIKDKHLLGKIKWVHMIIDEGHRMKNTQSKLTITLTQFYTSRYRLL 759
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKH-----GQRLTAPERFIRIA 355
LTGT +QN + EL+ L ++V P + + F E+++ P + G L E + I
Sbjct: 760 LTGTPLQNNLPELWALLNFVLPRIFNSVKSFDEWFNAPFSNTGNEGGMMLNEEEALLVI- 818
Query: 356 DERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCL 415
+ L VLR +LLRR K++ L K + V+ C MS LQ + Y+++ + I L
Sbjct: 819 ----KRLHKVLRPFLLRRLKKDVASEL-PDKVEKVIKCKMSSLQSKLYQQMKKHKMI--L 871
Query: 416 INKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLEL-----IKP 470
+D G P + + L N +++L++I NH + +
Sbjct: 872 SGEDHGTKKGKP----QGIRGLQN--------------AIMQLRKICNHPYVFEQVEVAI 913
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
NP E GPD+ + GK L++L+ +
Sbjct: 914 NPTKET--------------GPDL-----------------YRVSGKFELLDRLLPKLFA 942
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLI 589
++L+F ++DI+E FL +G+ + RLDG T + R L+ FN+ S VF++
Sbjct: 943 TKHRVLIFFQMTAIMDIMEDFLRYRGFKYLRLDGGTKPDDRSELLKLFNAPGSDYFVFIL 1002
Query: 590 STRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELV 649
STRAGGLGLNL SA+ V+I+D +WNP QDLQAQDR+ R GQK V + RL++ S+EE +
Sbjct: 1003 STRAGGLGLNLQSADTVIIYDSDWNPHQDLQAQDRAHRIGQKMEVRILRLVTEKSVEETI 1062
Query: 650 YTR 652
R
Sbjct: 1063 LAR 1065
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,723,426,431
Number of Sequences: 23463169
Number of extensions: 592868118
Number of successful extensions: 1852293
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13661
Number of HSP's successfully gapped in prelim test: 2325
Number of HSP's that attempted gapping in prelim test: 1773863
Number of HSP's gapped (non-prelim): 41557
length of query: 875
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 723
effective length of database: 8,792,793,679
effective search space: 6357189829917
effective search space used: 6357189829917
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)