BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044036
(875 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JIM3|RAD26_MOUSE Putative DNA repair and recombination protein RAD26-like OS=Mus
musculus GN=Rad26l PE=2 SV=2
Length = 699
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/658 (38%), Positives = 384/658 (58%), Gaps = 33/658 (5%)
Query: 62 SLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKD 121
++P Q + + +S +FDD++ EK ++ FQ LS+D
Sbjct: 62 TIPLQRLQEVKSTKDYSRSLIFDDKDLEKPYFPDRKIPSLASAFQ-----------LSED 110
Query: 122 GEYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFG 181
G+ +P +IN L ++QREG +FLY+ Y G ILGDDMGLGKTIQ I+FLAAV
Sbjct: 111 GD----SIPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLH 166
Query: 182 KDESSDST-------ILKDNK----VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYH 230
K + + +LK K K LI+ P SV+ NW+ E W F V++ H
Sbjct: 167 KKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLH 226
Query: 231 GPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC 290
G +D L +L+ E+ +T++++ R+ L+ + W +IVDEAHR+KN K+++
Sbjct: 227 GSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVM 286
Query: 291 LELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPER 350
+K + RIGLTGT++QN + EL+ + DW PG LG+R HF++ + +P++HGQR TA +R
Sbjct: 287 KAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKR 346
Query: 351 FIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLP 410
+ + L + + LRRTK G L KED +V+C+++D QK Y+ +L+
Sbjct: 347 ELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLP-KKEDRMVYCSLTDFQKAVYQTVLETE 405
Query: 411 EIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKP 470
++ ++ PC+CGS + +CC + N G CL L LQ+++NH+ L++
Sbjct: 406 DVALILTSSQPCTCGSGQKRRKCCYK-TNSRGDTVRTLCLSY--LTVLQKVANHVALLQA 462
Query: 471 NPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS 530
+ ++ + VF D V +++ +F LSD K GKM+ L++L+ +
Sbjct: 463 ASTSK-HQETVIKRICDRVFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHFRK 520
Query: 531 KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLIS 590
+ DK+LLFS+S ++LD+L+++ + G + RLDGST S R +V +FNSS + L+S
Sbjct: 521 QRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVS 580
Query: 591 TRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVY 650
T AGGLGLN V AN V++FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y
Sbjct: 581 TMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMY 640
Query: 651 TRQVYKQQLSNIAVSGKLEKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
RQVYKQQL + V + KRYFE VQ KE +GELFG+ NLF+ S + T +I+E
Sbjct: 641 LRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILE 698
>sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo
sapiens GN=RAD26L PE=1 SV=1
Length = 712
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/640 (38%), Positives = 370/640 (57%), Gaps = 36/640 (5%)
Query: 82 VFDDEEKEKEQ-EQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEH 140
+FDDE+ EK KF + LS +G+ +P +IN L ++
Sbjct: 94 IFDDEDLEKPYFPNRKFPSSSVA------------FKLSDNGD----SIPYTINRYLRDY 137
Query: 141 QREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDST-------ILKD 193
QREG +FLY Y + G ILGDDMGLGKT+Q I+FLAAV K + + +L+
Sbjct: 138 QREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPEFLLRS 197
Query: 194 NKVD-----KKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRDMILEKLEACGVEV 248
K + K LI+ P SV+ NW+ E W F V++ HG +D L +++ E+
Sbjct: 198 MKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCEI 257
Query: 249 LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQN 308
+T++++ R+ L+ + W VIVDEAHR+KN K+++ LK RIGLTGTI+QN
Sbjct: 258 ALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQN 317
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ + DW PG LG+ +F++ + +P++HGQR TA +R + + Q L +
Sbjct: 318 NMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSG 377
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+ LRRTK I + KED +V+C+++D QK Y+ +L+ ++ ++ PC+C S
Sbjct: 378 WFLRRTKT-LIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQ 436
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
+ CC + ++ L L L LQ+++NH+ L++ + ++ +
Sbjct: 437 KRRNCCYKTNSHGETVKT---LYLSYLTVLQKVANHVALLQAASTSK-QQETLIKRICDQ 492
Query: 489 VFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDIL 548
VF D V +++ +F LSD K GKM+ L++L+ DK+LLFS+S ++LD+L
Sbjct: 493 VFSRFPDFVQ-KSKDAAFETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVL 551
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVI 608
+++ + G + RLDGST S R +V +FNS+ + L+ST AGGLGLN V AN VV+
Sbjct: 552 QQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGANVVVL 611
Query: 609 FDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKL 668
FDP WNPA DLQA DR++R GQ R V V RL+S G++EE++Y RQ+YKQQL + V +
Sbjct: 612 FDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSEN 671
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSD-NLFTSEIIE 707
KRYFE VQ KE QGELFGI NLF+ S + T +I+E
Sbjct: 672 AKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKDILE 711
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1
SV=1
Length = 1493
Score = 329 bits (843), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 306/555 (55%), Gaps = 61/555 (10%)
Query: 127 IQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
+VP + +L ++Q+ GV++L++L+ + GGILGD+MGLGKTIQ IAFLA G S
Sbjct: 497 FKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA---GLSYSK 553
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPN-----RDMILEK 240
T + + + G +I+CP++V+ W EF + W F V+I H ++ ++
Sbjct: 554 IRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRD 613
Query: 241 LEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
+ C +LITS+ R+ +S +W VI+DE H+++N + + +AC + +T +RI
Sbjct: 614 VAHCH-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRII 672
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
L+G+ MQN + EL++LFD++ PG LGT F E + P+ G A ++ A +
Sbjct: 673 LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC 732
Query: 361 HLVAVLRKYLLRRTKEETIGHLMM-GKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
L + YLLRR K + L + K + V+FC ++D Q + Y+ + E+ ++N +
Sbjct: 733 VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE 792
Query: 420 LPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQ 479
+ G L+ L++I NH +L P++ K
Sbjct: 793 MQIFSG-----------------------------LIALRKICNHPDLFSGGPKNL--KG 821
Query: 480 RKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFS 539
D EL FG K GKM +E L+ W +G ++LLFS
Sbjct: 822 LPDDELEEDQFGY-------------------WKRSGKMIVVESLLKIWHKQGQRVLLFS 862
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLN 599
S +MLDILE FL + Y++ ++DG+T RQ L+ +N S VFL++TR GGLG+N
Sbjct: 863 QSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVN 922
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L ANRVVI+DP+WNP+ D QA++R++R GQK+ V V+RLL+AG++EE +Y RQ++KQ L
Sbjct: 923 LTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFL 982
Query: 660 SNIAVSGKLEKRYFE 674
+N + ++R+F+
Sbjct: 983 TNRVLKDPKQRRFFK 997
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 306/602 (50%), Gaps = 131/602 (21%)
Query: 128 QVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSD 187
++P I L +Q+ V++LY+LY+ GGI+GD+MGLGKTIQ IAF+AA+
Sbjct: 288 KIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH------H 341
Query: 188 STILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-------------------------- 221
S +L G VLI+CP++V++ W EF W
Sbjct: 342 SGLLT-------GPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDE 394
Query: 222 ------------STFNVSIYHGPNR-----------DMILEKLEACGVEVLITSFDSYRI 258
S F+ + R D +++K+ G +LIT++ RI
Sbjct: 395 NDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG-HILITTYVGLRI 453
Query: 259 HGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFD 318
H L +V W+ ++DE H+++N S++ + C +LKT NRI L+GT +QN + EL++LFD
Sbjct: 454 HSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFD 513
Query: 319 WVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEET 378
++ PG LGT F++ + P+ G A ++ + L ++ YLLRR K +
Sbjct: 514 FIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADV 573
Query: 379 IGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLD 438
L KE V+FC ++ Q+ Y L S L Q++ KR
Sbjct: 574 AKDLPQKKE-MVLFCKLTKYQRSKYLEFLH----------------SSDLNQIQNGKRN- 615
Query: 439 NLDGCDSCPFCLVLPCLVKLQQISNHLELI-KPNPRDEPDKQRKDAELASAVFGPDIDLV 497
VL + L++I NH +L+ + R PD +G
Sbjct: 616 ------------VLFGIDILRKICNHPDLLDRDTKRHNPD------------YG------ 645
Query: 498 GGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGY 557
D K GKM+ +++L+ W +G K LLF+ S +MLDILE+F+ K
Sbjct: 646 -------------DPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDP 692
Query: 558 SFS-----RLDGSTPSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPN 612
S R+DG+T RQSLVD FN+ S VFL++TR GGLG+NL ANR++IFDP+
Sbjct: 693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPD 751
Query: 613 WNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRY 672
WNP+ D+QA++R++R GQKR V ++RL+ GS+EE +Y RQ++KQ L+N ++ +KR+
Sbjct: 752 WNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRF 811
Query: 673 FE 674
F+
Sbjct: 812 FK 813
>sp|Q9UR24|RHP26_SCHPO DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp26 PE=4 SV=1
Length = 973
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 297/588 (50%), Gaps = 114/588 (19%)
Query: 129 VPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
+P I L +Q V++L++LY + GGI+GD+MGLGKTIQ ++FL S
Sbjct: 269 IPGDIRPHLFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFL-----------S 317
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEF-SRWSTFNVSIYHGPNRDM----------- 236
++ K K LI+CP+++++ W EF + W+ V + H
Sbjct: 318 SLHHSGKFQKPA--LIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYES 375
Query: 237 -----------------------------ILEKLEACGVEVLITSFDSYRIHGSILSEVN 267
++E + G +LIT++ RI+G ++
Sbjct: 376 DASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRG-HILITTYAGLRIYGDLILPRE 434
Query: 268 WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGT 327
W ++DE H+++N S++ ++C +++T NRI L+GT +QN + EL+NLFD+V PG LGT
Sbjct: 435 WGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGT 494
Query: 328 REHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKE 387
F+ + P+ G A ++ A + L ++ YLLRR K + L K
Sbjct: 495 LPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPK-KS 553
Query: 388 DNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCP 447
+ V+FC ++ LQ++AY+ LQ GS + ++ KR L G D
Sbjct: 554 EQVLFCKLTPLQRKAYQDFLQ----------------GSDMQKILNGKR-QMLYGIDI-- 594
Query: 448 FCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFI 507
L++I NH PD ++ L +
Sbjct: 595 ----------LRKICNH-----------PDLVTREYLLHKEDYN---------------- 617
Query: 508 GLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIR-KGYSFSRLDGST 566
D + GK++ + L+ W +G + LLFS + +MLDILE L + R+DGST
Sbjct: 618 -YGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGST 676
Query: 567 PSNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSF 626
LRQ LVD+FN + VFL++TR GGLG+NL A+RV++FDP+WNP+ D QA++R++
Sbjct: 677 SIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAW 736
Query: 627 RFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEKRYFE 674
R GQK+ V+V+RL++AG++EE +Y RQ++KQ L+N + ++R+F+
Sbjct: 737 RLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRRFFK 784
>sp|A6QQR4|ERC6L_BOVIN DNA excision repair protein ERCC-6-like OS=Bos taurus GN=ERCC6L
PE=2 SV=1
Length = 1242
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 321/643 (49%), Gaps = 112/643 (17%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L E+Q+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLYEYQKEGIAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--- 247
+VL+I P+S+I W EF +W+ V +HGP++D L C ++
Sbjct: 146 --------NHVLLIMPTSLISTWLREFVKWTPGMRVKTFHGPSKDERTRNL--CRIQQRN 195
Query: 248 -VLITSFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+IT++ + LS +N W+ VI+DEAH++K+ +K + + NRI L
Sbjct: 196 GVIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIPASNRILL 255
Query: 302 TGTIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++LFD+ GS LGT F+ Y+ P+ + A + + +
Sbjct: 256 TGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALGFKISE 315
Query: 361 HLVAVLRKYLLRRTKEET------------------IGHL-----MMGKEDNVVFCTMSD 397
+L+A+++ Y LRRTKEE +G + + K D +++ +
Sbjct: 316 NLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVP 375
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVK 457
LQ+ YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 376 LQEEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACGL- 424
Query: 458 LQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIG-LSD---VK 513
L +A F ++ G ++ + I +SD ++
Sbjct: 425 -------------------------LNLGAAKFSVQDEIEGEDSSDVDHIDQISDDTLME 459
Query: 514 SCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQ 572
GKM L L+ +G + L+FS S R+L+I+E+ L + + R+DG+ + R+
Sbjct: 460 ESGKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLKNRHFKILRIDGTITHLVERE 519
Query: 573 SLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKR 632
+ F + VFL++T+ GG+GL L +A+RVVIFDP+WNPA D QA DR +R GQK
Sbjct: 520 KRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKE 579
Query: 633 HVIVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICN 691
+V+V+RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 580 NVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSK-QELRE---------- 628
Query: 692 LFRDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E ++ Q Q Q H + K L+ HI
Sbjct: 629 --------LFTIEDFQNSATQLQLQSLHAAQRRSDKNLDEHIA 663
>sp|A2BGR3|ERC6L_DANRE DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l
PE=1 SV=1
Length = 1451
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 316/641 (49%), Gaps = 110/641 (17%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L +HQ+EGV FLY LY++ + GGIL DDMGLGKTIQ I+FL+ ++
Sbjct: 104 KLYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMY-------------- 149
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN---RDMILEKLEACGVEVLI 250
+ + L++ P+S+I+NW EF++W+ V +HG + R+ LE+++ G V+I
Sbjct: 150 DAELANHTLLVMPTSLIKNWVREFAKWTPGMRVKEFHGSSKTERNRNLERIQRKG-GVII 208
Query: 251 TSF----DSYRIHGSI-LSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTI 305
T++ ++Y GS E W+ VI+DEAH++K +K + + +NR+ LTGT
Sbjct: 209 TTYQMLINNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTP 268
Query: 306 MQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + E++ LFD+ GS LGT + F+ Y+ P+ + A + Q+L
Sbjct: 269 VQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRISQNLTD 328
Query: 365 VLRKYLLRRTKEETIGH----------------------------LMMGKEDNVVFCTMS 396
+++ Y LRRTK + + K D +V+ +S
Sbjct: 329 IIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIVWTYLS 388
Query: 397 DLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLV 456
+Q+ Y + + L +I K+L + SPL ++ K+L CD P L ++
Sbjct: 389 SVQEDIYNKFISLDQI-----KELLTTTRSPLAELTVLKKL-----CDH-PRLLSQRAVI 437
Query: 457 KLQ-QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSC 515
+L + + EL+ + E SAV D N + + I +
Sbjct: 438 QLGLERGSDSELVHSD------------ESESAVSQID------NISDHTLI-----EES 474
Query: 516 GKMRALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGS-TPSNLRQSL 574
GK++ + LM +G + L+FS S +MLDI+E+ L + + RLDG+ T R+
Sbjct: 475 GKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTVTQLAEREKR 534
Query: 575 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHV 634
+ F + +FL++T+ GG+G+ L ANRVVIFDP+WNPA D QA DR++R GQ +V
Sbjct: 535 ISLFQTDKRYTIFLLTTQVGGVGITLTGANRVVIFDPSWNPATDAQAVDRAYRIGQTENV 594
Query: 635 IVFRLLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLF 693
I++RL++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 595 IIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYF-SKQELRE------------ 641
Query: 694 RDLSDNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LF E S Q Q Q H + + L+ HI
Sbjct: 642 ------LFKLEDTRSSSTQQQLQAMHAQSRRSDTSLDHHIA 676
>sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L
PE=1 SV=1
Length = 1250
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 197/637 (30%), Positives = 318/637 (49%), Gaps = 102/637 (16%)
Query: 133 INCRLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
++ +L EHQ+EG+ FLY LY++ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV 145
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--V 248
+VL+I P+++I W EF +W+ V +HGP++D L V
Sbjct: 146 --------NHVLLIMPTNLINTWVKEFIKWTPGMRVKTFHGPSKDERTRNLNRIQQRNGV 197
Query: 249 LITSFDSYRIHGSILS-----EVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
+IT++ + LS E W+ VI+DEAH++K +K + + NR+ LTG
Sbjct: 198 IITTYQMLINNWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRLLLTG 257
Query: 304 TIMQNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
T +QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L
Sbjct: 258 TPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENL 317
Query: 363 VAVLRKYLLRRTKE---------------------ETIGHL--MMGKEDNVVFCTMSDLQ 399
+A+++ Y LRRTKE + I + + K D +++ + LQ
Sbjct: 318 MAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLIIWIRLVPLQ 377
Query: 400 KRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQ 459
+ YR+ + L I K+L SPL ++ K+L + S C CL+ L
Sbjct: 378 EEIYRKFVSLDHI-----KELLMETRSPLAELGVLKKLCDHPRLLSARAC----CLLNLG 428
Query: 460 QISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMR 519
S + + +D+ PD+D + + + ++ GKM
Sbjct: 429 TFSA-----------QDGNEGEDS--------PDVDHI------DQVTDDTLMEESGKMI 463
Query: 520 ALEKLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL-RQSLVDDF 578
L L+ +G + L+FS S ++L+I+E+ L + + R+DG+ L R+ ++ F
Sbjct: 464 FLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLF 523
Query: 579 NSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFR 638
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+R
Sbjct: 524 QQNKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYR 583
Query: 639 LLSAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNLFRDLS 697
L++ G++EE +Y RQV+K L K RYF Q+ +E
Sbjct: 584 LITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSK-QELRE---------------- 626
Query: 698 DNLFTSEIIESHEEQGQQQERHHCTNQGFKGLETHIV 734
LFT E +++ Q Q Q H + L+ HI
Sbjct: 627 --LFTIEDLQNSVTQLQLQSLHAAQRKSDIKLDEHIA 661
>sp|Q8BHK9|ERC6L_MOUSE DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l
PE=1 SV=1
Length = 1240
Score = 272 bits (695), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 304/593 (51%), Gaps = 88/593 (14%)
Query: 136 RLLEHQREGVKFLYKLYKN-KHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDN 194
+L EHQ+EG+ FLY LYK+ + GGIL DDMGLGKT+Q IAFL+ +F D++++
Sbjct: 96 KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMF------DASLV--- 146
Query: 195 KVDKKGYVLIICPSSVIQNWEIEFSRWST-FNVSIYHGPNRDMILEKLEACGVE--VLIT 251
+VL+I P+++I W EF++W+ V +HG ++ L V+IT
Sbjct: 147 -----NHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSKSERTRSLTRIQQRNGVVIT 201
Query: 252 SFDSYRIHGSILSEVN-----WEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIM 306
++ + L+ N W+ VI+DEAH++K+ +K + + NR+ LTGT +
Sbjct: 202 TYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKSAVCARAIPASNRLLLTGTPV 261
Query: 307 QNKIMELYNLFDWVAPGS-LGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAV 365
QN + EL++LFD+ GS LGT + F+ Y+ P+ + A + + ++L+ +
Sbjct: 262 QNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISENLMEI 321
Query: 366 LRKYLLRRTKEET-----------IGH------------LMMGKEDNVVFCTMSDLQKRA 402
++ Y LRRTKEE +G + K D +V+ + LQ+
Sbjct: 322 IKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPLQEEI 381
Query: 403 YRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQIS 462
YR+ + L I K+L SPL ++ K+L CD C +
Sbjct: 382 YRKFVSLDHI-----KELLMETRSPLAELGVLKKL-----CDHPRLLSARACRLL----- 426
Query: 463 NHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALE 522
+L + +DE ++Q + + S PD L ++ GKM L
Sbjct: 427 -NLGTATFSAQDE-NEQEDVSNMNSIDHLPDKTL---------------IQESGKMIFLM 469
Query: 523 KLMYSWASKGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL--RQSLVDDFNS 580
L+ +G + L+FS S+++L+I+E+ L K + R+DG T ++L R+ + F
Sbjct: 470 SLLERLQDEGHQTLVFSQSIKILNIIERLLKNKHFKTLRIDG-TVTHLWEREKRIQLFQQ 528
Query: 581 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLL 640
+ VFL++T+ GG+GL L +A RVVIFDP+WNPA D QA DR +R GQK +V+V+RL+
Sbjct: 529 NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLI 588
Query: 641 SAGSLEELVYTRQVYKQQLSNIAVSGKLEK-RYFEGVQDCKEFQGELFGICNL 692
+ G++EE +Y RQV+K L K RYF K+ ELF + +L
Sbjct: 589 TCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYF-----TKQELKELFTVGDL 636
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 266 bits (680), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 84/548 (15%)
Query: 123 EYPIIQVPASINCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGK 182
E+ + PA +N +L +Q +GV +L L+KNK GIL D+MGLGKT+QTI+FL +
Sbjct: 182 EFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--- 238
Query: 183 DESSDSTILKDNKVDK-KGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPNRD---MI 237
++K G L+I P S + NW E +RW+ N I G + +I
Sbjct: 239 -----------RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELI 287
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
+KL C +V+I S++ S L ++NWE +I+DEAHR+KNE+S L E +RN
Sbjct: 288 QKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRN 347
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADE 357
R+ +TGT +QN + EL+ L +++ P + F +++ + E D+
Sbjct: 348 RLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF-----------SSESTEEDQDK 396
Query: 358 RKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLIN 417
+ L VL+ +LLRR K + L+ KE N ++ MS +QK+ Y+++L+
Sbjct: 397 IVKQLHTVLQPFLLRRIKSDVETSLLPKKELN-LYVGMSSMQKKWYKKILE--------- 446
Query: 418 KDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPD 477
KDL GS ++ E RL N+ +++L++ NH L
Sbjct: 447 KDLDAVNGSNGSK-ESKTRLLNI--------------MMQLRKCCNHPYLF--------- 482
Query: 478 KQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILL 537
D + D LV A+ + L +G ++L+
Sbjct: 483 ----DGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKL---------------KEEGSRVLI 523
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
FS R+LDILE + + Y + R+DGST R +DD+N+ SK+ VFL++TRAGGL
Sbjct: 524 FSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGL 583
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
G+NL SA+ VV++D +WNP DLQA DR+ R GQK+ V VFRL++ S+EE + R K
Sbjct: 584 GINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQK 643
Query: 657 QQLSNIAV 664
+L + +
Sbjct: 644 LRLDQLVI 651
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 266 bits (680), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 285/537 (53%), Gaps = 48/537 (8%)
Query: 137 LLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +L
Sbjct: 303 LRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVL 362
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVLI 250
K LI+ P S+++NW+ EF +W + + ++ + E + + V+I
Sbjct: 363 KR--------ALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMI 414
Query: 251 TSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKI 310
S++ + + + ++I DE HRLKN K A L RI LTGT +QN +
Sbjct: 415 ISYEMLLRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQNDL 474
Query: 311 MELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYL 370
E Y L ++V PG LG+ +R+ Y+EP+ + +A + + ++R L + ++
Sbjct: 475 QEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFI 534
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRRT +E I + K++N++FC + LQ YR+LL I +
Sbjct: 535 LRRT-QEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCLQG------------ 581
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
RL+N L C+ L+++ NH L+ +++ + D + S+++
Sbjct: 582 -----RLENSPH---------LICIGALKKLCNHPCLLFKALKEKCCDPKSDEHVESSLY 627
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW--ASKGDKILLFSYSVRMLDIL 548
D+ + +++F S++ S GK++ L KL+ + S ++++L S + L++L
Sbjct: 628 EGLTDVFPQDYTSDTF---SEIDS-GKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVL 683
Query: 549 EKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVV 607
+ GYS++RLDG+TP + RQ +VD FNS S +FL+S++AGG+GLNLV A+ ++
Sbjct: 684 LETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLI 743
Query: 608 IFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 744 LYDIDWNPATDIQAMARVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVV 800
>sp|P41410|RAD54_SCHPO DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp54 PE=1 SV=2
Length = 852
Score = 266 bits (679), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 282/552 (51%), Gaps = 79/552 (14%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKD-ESSDSTI 190
L HQ EGVKFLYK + +G I+ D+MGLGKT+Q IA L + + ++ TI
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPN--RDMILEKLEACG 245
K +I CPSS+++NW E +W I G + +++I+ +
Sbjct: 324 EK---------AIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWAS 374
Query: 246 VE-------VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNR 298
V VLI S+++ R + L+ +++ DE HRLKN S + A +L + R
Sbjct: 375 VHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRR 434
Query: 299 IGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADER 358
+ L+GT +QN + E ++L ++ PG LG+R+ FR+ Y+ P+ G+ E+ D +
Sbjct: 435 VILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAK 494
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
L ++ ++++RRT + + + K ++VVFC +S+ Q Y+ + PEI NK
Sbjct: 495 LAELAKIVNRFIIRRT-NDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEI----NK 549
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
L + PL + L++I NH +L+
Sbjct: 550 ILRGTGSQPLKAIGL------------------------LKKICNHPDLLNLT------- 578
Query: 479 QRKDAELASAVFGPDI---DLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD-K 534
+D E A+F P +L G + +S + GKM LE+++Y + D K
Sbjct: 579 --EDLEGCEALFPPGFIPRELRGRDRNIDSSLS-------GKMLVLERMLYQIKQETDDK 629
Query: 535 ILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTR 592
I+L S LD+ E+ +GY RLDG+ N RQ LVD FN P K VFL+S++
Sbjct: 630 IVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFND-PEKDAFVFLLSSK 688
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGG G+NL+ ANR+++FDP+WNPA D QA R +R GQK+ V+R ++ G++EE ++ R
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 653 QVYKQQLSNIAV 664
Q +KQ LS+ V
Sbjct: 749 QSHKQSLSSCVV 760
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 102/584 (17%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N L ++Q EG+ +L + + IL D+MGLGKTIQTI+FL+ +F + +
Sbjct: 481 NLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY------- 533
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGP--NRDMILE------KLEAC 244
G LI+ P S + +W+ EF W+ NV +Y G +R+ I E + +
Sbjct: 534 ------GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL 587
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
LIT+++ ++L +NW + VDEAHRLKN+ S LY ++ K+ +R+ +TGT
Sbjct: 588 KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 647
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL++L ++ P E F E + + ++G Q L
Sbjct: 648 PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGY----------------QSLHK 691
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL +LLRR K++ + + K + ++ MS LQK+ Y+ +L + L +
Sbjct: 692 VLEPFLLRRVKKD-VEKSLPAKVEQILRVEMSALQKQYYKWILTR-NYKALAKGTRGSTS 749
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
G L +++L++ NH LIKP +E
Sbjct: 750 G-------------------------FLNIVMELKKCCNHCYLIKPPEENE--------- 775
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+N I LS ++S GK+ L+KL+ +G+++L+FS VRM
Sbjct: 776 ----------------RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRM 819
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSA 603
LDIL ++L K Y F RLDGS +R+ +D FN+ S+ FL+STRAGGLG+NL SA
Sbjct: 820 LDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASA 879
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ VVIFD +WNP DLQAQ R+ R GQK+ V ++RL++ G++EE + R K L ++
Sbjct: 880 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLV 939
Query: 664 V-----SGKLEKRYFEGVQDCKEFQGE------LFGICNLFRDL 696
+ +G+ G + F E FG +LF++L
Sbjct: 940 IQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKEL 983
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 276/540 (51%), Gaps = 90/540 (16%)
Query: 137 LLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKV 196
L ++Q G+ +L LY+N GIL D+MGLGKT+QTIA L LK +
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLG------------YLKHYR- 233
Query: 197 DKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDM----ILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW + V + G ++D+ I +++ +V +T
Sbjct: 234 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG-DKDVRAAFIRDEMMPGEWDVCVT 292
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + +W +++DEAHR+KNEKSKL E K+ NR+ LTGT +QN +
Sbjct: 293 SYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLH 352
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL+ L +++ P + + F ++D G Q+L + L AVL+ +L
Sbjct: 353 ELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV-------------ERLHAVLKPFL 399
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y ++L
Sbjct: 400 LRRIKTDVEKSLPPKKEIKI-YLGLSKMQREWYTKIL----------------------- 435
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 436 ---MKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 479
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D +VG + GKM AL+KL+ +G ++L+FS R+LDILE
Sbjct: 480 TTDEHIVGNS---------------GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + +GY +SRLDG TP R+ +D FN+ + SK +F++STRAGGLG+NL SA+ V+++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +I + G+L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 256 bits (654), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 280/541 (51%), Gaps = 96/541 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L ++Q +G+ +L L++NK GIL D+MGLGKT+QTI+FL + +
Sbjct: 183 KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQI---------- 232
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHGPN-------RDMILEKLEACGVE 247
+G LII P S + NW EF +W+ NV + HG R++ILE +
Sbjct: 233 ---EGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILE----ARFD 285
Query: 248 VLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQ 307
VLITS++ + L + W+ +++DEAHR+KNE+S L ++NR+ +TGT +Q
Sbjct: 286 VLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQ 345
Query: 308 NKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLR 367
N + EL+ L +++ P G E F E+++ Q + ++ I I Q L +VL
Sbjct: 346 NNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIVI-----QQLHSVLN 394
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+LLRR K + L+ E N V+ M+D+Q + Y+ LL+ KD+ G+
Sbjct: 395 PFLLRRVKADVEKSLLPKIETN-VYVGMTDMQIQWYKSLLE---------KDIDAVNGA- 443
Query: 428 LTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNH---LELIKPNPRDEPDKQRKDAE 484
+ + E RL N+ +++L++ NH E +P P D+
Sbjct: 444 VGKREGKTRLLNI--------------VMQLRKCCNHPYLFEGAEPGPPYTTDEH----- 484
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+F + GKM L+KL+ KG ++L+FS R+
Sbjct: 485 ---LIF-----------------------NSGKMIILDKLLKRLKEKGSRVLIFSQMSRL 518
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSA 603
LDILE + + + + R+DGST R +D++N S++ VFL++TRAGGLG+NLV+A
Sbjct: 519 LDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTA 578
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ V++FD +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L +
Sbjct: 579 DTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLV 638
Query: 664 V 664
+
Sbjct: 639 I 639
>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens
GN=RAD54B PE=1 SV=1
Length = 910
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 274/538 (50%), Gaps = 48/538 (8%)
Query: 136 RLLEHQREGVKFLYKLY-----KNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
L HQ+EG+ FLY+ + G IL D+MGLGKT+Q I+ + + + +
Sbjct: 295 HLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPV 354
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPNRDMILEKLEACGVEVL 249
+K LI+ P S++ NW+ EF +W + + I+ + E +++ VL
Sbjct: 355 IKK--------TLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEEFIKSIFYSVL 406
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNK 309
I S++ + + ++++I DE HRLKN K A + L RI LTGT +QN
Sbjct: 407 IISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQND 466
Query: 310 IMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKY 369
+ E + L D+V PG LG+ +R+ Y+EP+ + +A E + + R L + +
Sbjct: 467 LQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLF 526
Query: 370 LLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLT 429
+LRRT +E I + K +NVVFC LQ YR+LL ++ + L
Sbjct: 527 ILRRT-QEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLL--------- 576
Query: 430 QVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAV 489
++ P L C+ L+++ NH L+ + +++ D ++
Sbjct: 577 --------------ENSPH---LICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSL 619
Query: 490 FGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDI 547
+ + + + F K GK++ L KL+ +K++L S + L+I
Sbjct: 620 YKGLLSVFPADYNPLLFTE----KESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675
Query: 548 LEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSANRV 606
L++ R GY+++RLDG TP + RQ +VD FNS S +FL+S++AGG+GLNL+ + +
Sbjct: 676 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHL 735
Query: 607 VIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
+++D +WNPA D+QA R +R GQK V ++RLL+ G++EE +Y RQ+ KQ L V
Sbjct: 736 ILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVV 793
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 311/664 (46%), Gaps = 123/664 (18%)
Query: 26 SSVSQESSND-TLIIPRRPPKSSLAQQLQR----LGETYNFS---------LPQQNPETR 71
S++ + S ND ++ + P S A +R L +T NFS L P
Sbjct: 19 SNIPESSGNDPSMEVDDEPESSDAADSFKRFERLLQKTENFSHCLSSGDAKLATGAPVDT 78
Query: 72 REKAPVEKSNVFDDEEKEKEQEQEKFGRHQLGQFQFDHTGPFEPLVLSKDGEYPIIQVPA 131
+++ K N D + + ++ EQE+ + D F+ + P
Sbjct: 79 KKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFD-------------KSPF 125
Query: 132 SI-NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTI 190
I N + ++Q G+ +L L NK GIL D+MGLGKT+QTI+ +
Sbjct: 126 YIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIG------------Y 173
Query: 191 LKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHGPN-------RDMIL-EKL 241
+K K +K L+I P S +QNW EF +W + N + G RD+IL +K
Sbjct: 174 MKHYK-NKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKF 232
Query: 242 EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ C T+++ + L ++NW +I+DEAHR+KNEKSKL EL + NR+ +
Sbjct: 233 DVC-----CTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLI 287
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL+ L +++ P + + F ++ G + Q
Sbjct: 288 TGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGN------------TDLVQR 335
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L VL+ +LLRR K + L+ KE V + +S +Q+ Y ++L
Sbjct: 336 LHKVLQPFLLRRIKSDVEKSLLPKKEVKV-YVGLSKMQREWYTKVL-------------- 380
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
K +D ++G ++ L+ L++ NH L
Sbjct: 381 ------------MKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLF------------- 415
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
D F D LV + GKM L+KL+ + +G ++L+FS
Sbjct: 416 DGAEPGPPFTTDQHLVD---------------NSGKMVVLDKLLMKFKEQGSRVLIFSQF 460
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
RMLD+LE F + Y + RLDGSTP R + ++ +N+ SK+ +F+++TRAGGLG+NL
Sbjct: 461 SRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINL 520
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ +++E + + K +L
Sbjct: 521 ATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLD 580
Query: 661 NIAV 664
NI +
Sbjct: 581 NIVI 584
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 262/531 (49%), Gaps = 95/531 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IA L+ +F S
Sbjct: 846 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSP-------- 897
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
+II P S I NWE EFS W+ N +YHG +R MI + C
Sbjct: 898 ------FMIIAPLSTITNWEREFSNWTDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIP 951
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E++W V++DEAHRLKN KL + L+ +++ L
Sbjct: 952 GAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLL 1011
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTR-EHFREFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + E REF D LK +E+ Q
Sbjct: 1012 TGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD--LK--------------TEEQVQ 1055
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQ----LPEIQCLI 416
L ++L+ +LRR KE+ +L K++ ++ ++D+QK+ YR +L+ +
Sbjct: 1056 KLQSILKPMMLRRLKEDVEKNL-APKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQ 1114
Query: 417 NKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEP 476
N ++P + + +CC + G + + +S E+ P
Sbjct: 1115 NSNVPNLLNTMMELRKCCNHPYLITGAEE-------------KIVSELREVYDP------ 1155
Query: 477 DKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKIL 536
PD L + V+S GK+ L+KL+ + G K+L
Sbjct: 1156 -------------LAPDFHL------------QALVRSAGKLVLLDKLLPRLKAGGHKVL 1190
Query: 537 LFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGG 595
+FS VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGG
Sbjct: 1191 IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 1250
Query: 596 LGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLE 646
LG+NL +A+ VIFD +WNP DLQAQ R R GQ + V V+RL++ S E
Sbjct: 1251 LGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1301
>sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp.
japonica GN=RAD54 PE=1 SV=1
Length = 980
Score = 253 bits (647), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 288/574 (50%), Gaps = 64/574 (11%)
Query: 113 FEPLVL-------SKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKNK------HGGI 159
EPL+L ++ + I+V + L HQREGV+F++ G I
Sbjct: 204 IEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCI 263
Query: 160 LGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEFS 219
L DDMGLGKT+Q+I L + + + + + +++ P+S++ NWE E
Sbjct: 264 LADDMGLGKTLQSITLLYTLLCQGFDAKPMVKR---------AVVVTPTSLVSNWESEII 314
Query: 220 RWSTFNVSIYH--GPNRDMILEKLEA-----CGVEVLITSFDSYRIHGSILSEV-NWEIV 271
+W V + R +L +E+ ++VLI S++++R+H S + +++
Sbjct: 315 KWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLL 374
Query: 272 IVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHF 331
I DEAHRLKN+++ A L + RI L+GT MQN + E +++ ++ PG LG +F
Sbjct: 375 ICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYF 434
Query: 332 REFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVV 391
R +Y+ P+ G+ TA + ER L A + ++LRRT HL K VV
Sbjct: 435 RRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHL-PPKIVEVV 493
Query: 392 FCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLV 451
C ++ LQ Y + ++ LI++ G+ ++ V
Sbjct: 494 CCKLTALQTALYNHFIHSKNVKRLISE------GTKQSK--------------------V 527
Query: 452 LPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSD 511
L + L+++ NH +LI + + + F P +L G + + + G
Sbjct: 528 LAYITALKKLCNHPKLIYDTIKSN-NSGGSGFDDCLRFFPP--ELFSGRSGSWTGGGGMW 584
Query: 512 VKSCGKMRALEKLMYSWASKG-DKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNL 570
V+ GKM L +L+ K D+I+L S + LD+ + + Y + RLDG+T N
Sbjct: 585 VELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINK 644
Query: 571 RQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRF 628
RQ LV+ FN PS+ VFL+S++AGG GLNLV NR+++FDP+WNPA D QA R +R
Sbjct: 645 RQKLVNQFN-DPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRD 703
Query: 629 GQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNI 662
GQK+ V ++R LS G++EE VY RQ+ K+ L +
Sbjct: 704 GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKV 737
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 271/537 (50%), Gaps = 88/537 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+I FL V+
Sbjct: 754 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYN-------------- 799
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
V +G L+I P S I NWE EF W+ N +YHG +R MI + C
Sbjct: 800 VGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIP 859
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E+ W VI+DEAHRLKN KL + + +++ L
Sbjct: 860 GAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLL 919
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + F ++F D LK +E+ Q
Sbjct: 920 TGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGD--LK--------------TEEQVQ 963
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L A+L+ +LRR KE+ +L K++ ++ ++++QK+ YR +L+ K+
Sbjct: 964 KLQAILKPMMLRRLKEDVEKNL-APKQETIIEVELTNIQKKYYRAILE---------KNF 1013
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S LT+ NL L +++L++ NH LI +K
Sbjct: 1014 -----SFLTKGASQSNTPNL-----------LNTMMELRKCCNHPYLIT----GAEEKII 1053
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ A+ V PD F + V+S GK+ ++KL+ + G K+L+FS
Sbjct: 1054 SEFREATPVVPPD------------FHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQ 1101
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
VR LDILE +LI++ Y + R+DG N+RQ+ +D F+ S + VFL+ TRAGGLG+N
Sbjct: 1102 MVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGIN 1161
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
L +A+ +IFD +WNP DLQAQ R R GQ + V ++RL++ S E ++ + K
Sbjct: 1162 LTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLK 1218
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 252 bits (644), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 272/537 (50%), Gaps = 88/537 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IAFL V+
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYN-------------- 855
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
V G L+I P S I NWE EF+ W+ N +YHG +R MI + C
Sbjct: 856 VGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP 915
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E+ W VI+DEAHRLKN KL + + +++ L
Sbjct: 916 GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLL 975
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + F ++F D LK +E+ Q
Sbjct: 976 TGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD--LK--------------TEEQVQ 1019
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L A+L+ +LRR KE+ +L K++ ++ ++++QK+ YR +L+ K+
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNL-APKQETIIEVELTNIQKKYYRAILE---------KNF 1069
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S L++ + NL L +++L++ NH LI N +E K
Sbjct: 1070 -----SFLSKGAGHTNMPNL-----------LNTMMELRKCCNHPYLI--NGAEE--KIL 1109
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ A + D L V+S GK+ ++KL+ + G K+L+FS
Sbjct: 1110 TEFREACHIIPHDFHLQAM------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1157
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG+N
Sbjct: 1158 MVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 1217
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
L +A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ + K
Sbjct: 1218 LTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLK 1274
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 272/537 (50%), Gaps = 88/537 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IAFL V+
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYN-------------- 855
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
V G L+I P S I NWE EF+ W+ N +YHG +R MI + C
Sbjct: 856 VGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP 915
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E+ W VI+DEAHRLKN KL + + +++ L
Sbjct: 916 GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLL 975
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + F ++F D LK +E+ Q
Sbjct: 976 TGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD--LK--------------TEEQVQ 1019
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L A+L+ +LRR KE+ +L K++ ++ ++++QK+ YR +L+ K+
Sbjct: 1020 KLQAILKPMMLRRLKEDVEKNL-APKQETIIEVELTNIQKKYYRAILE---------KNF 1069
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S L++ + NL L +++L++ NH LI N +E K
Sbjct: 1070 -----SFLSKGAGHTNMPNL-----------LNTMMELRKCCNHPYLI--NGAEE--KIL 1109
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ A + D L V+S GK+ ++KL+ + G K+L+FS
Sbjct: 1110 MEFREACHIIPQDFHLQAM------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1157
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG+N
Sbjct: 1158 MVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 1217
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
L +A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ + K
Sbjct: 1218 LTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLK 1274
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 272/537 (50%), Gaps = 88/537 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EGV +L + N+ IL D+MGLGKTIQ+IAFL V+
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYN-------------- 857
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHG--PNRDMILEKLEACG-------- 245
V G L+I P S I NWE EF+ W+ N +YHG +R MI + C
Sbjct: 858 VGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP 917
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ LIT+F+ L E+ W VI+DEAHRLKN KL + + +++ L
Sbjct: 918 GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLL 977
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERKQ 360
TGT +QN + EL++L ++ P + F ++F D LK +E+ Q
Sbjct: 978 TGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD--LK--------------TEEQVQ 1021
Query: 361 HLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDL 420
L A+L+ +LRR KE+ +L K++ ++ ++++QK+ YR +L+ K+
Sbjct: 1022 KLQAILKPMMLRRLKEDVEKNL-APKQETIIEVELTNIQKKYYRAILE---------KNF 1071
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S L++ + NL L +++L++ NH LI N +E K
Sbjct: 1072 -----SFLSKGAGHTNMPNL-----------LNTMMELRKCCNHPYLI--NGAEE--KIL 1111
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSY 540
+ A + D L V+S GK+ ++KL+ + G K+L+FS
Sbjct: 1112 MEFREACHIIPQDFHLQAM------------VRSAGKLVLIDKLLPKLKAGGHKVLIFSQ 1159
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG+N
Sbjct: 1160 MVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 1219
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
L +A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ + K
Sbjct: 1220 LTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLK 1276
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 267/543 (49%), Gaps = 86/543 (15%)
Query: 130 PASINC-RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDS 188
PA I + ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLG----------- 168
Query: 189 TILKDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEAC 244
LK K ++ G ++I P S +QNW EF +W ++ ++D I + L
Sbjct: 169 -YLKHFK-NQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPG 226
Query: 245 GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGT 304
+V +TS++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ +TGT
Sbjct: 227 EWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGT 286
Query: 305 IMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVA 364
+QN + EL+ L +++ P + E F E+++ G D L A
Sbjct: 287 PLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGD------------DALITRLHA 334
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VL+ +LLRR K E L KE + F +S +Q+ Y ++L
Sbjct: 335 VLKPFLLRRLKAEVEKRLKPKKEMKI-FVGLSKMQRDWYTKVL----------------- 376
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
K +D ++G + L++L++ +NH L D
Sbjct: 377 ---------LKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLF-------------DGA 414
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
+ D LV + GKM L+KL+ +G ++L+FS RM
Sbjct: 415 EPGPPYTTDTHLV---------------YNSGKMAILDKLLPKLQEQGSRVLIFSQMTRM 459
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFN-SSPSKQVFLISTRAGGLGLNLVSA 603
LDILE + + Y++ RLDG TP R + +FN + +K +F++STRAGGLG+NL +A
Sbjct: 460 LDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATA 519
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ V+I+D +WNP DLQA DR+ R GQK+ V VFRL++ ++EE + R K +L +
Sbjct: 520 DVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMV 579
Query: 664 VSG 666
+ G
Sbjct: 580 IQG 582
>sp|B4KHL5|RAD54_DROMO DNA repair and recombination protein RAD54-like OS=Drosophila
mojavensis GN=okr PE=3 SV=1
Length = 783
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 281/545 (51%), Gaps = 67/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + TI K
Sbjct: 149 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLTWTLLRQSPDCKPTISK 208
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+I+ PSS+++NWE EF++W + G +++ LE
Sbjct: 209 ---------AIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTTRALEQFAMNTAT 259
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
CG VL+ S++++R++ IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 260 RCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 319
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ + GQ + + + A ++ Q L
Sbjct: 320 GTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADSTDAERQRALQKTQEL 379
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ + ++RRT + +L + K + VV ++ +Q + Y L+ +++
Sbjct: 380 IGLVNQCIIRRTNQILTKYLPV-KFEMVVCVKLTPVQLQIYTNFLKSDQVR--------- 429
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+L C+ L + L+++ NH +LI ++ + K
Sbjct: 430 ---------------RSLADCNEKASLTALADITTLKKLCNHPDLI----YEKIAAKEKG 470
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYS 541
E + V P+ N + LS GK L+ ++ + A+ DK++L S
Sbjct: 471 FENSQNVLPPNYKPKDVNPE------LS-----GKFMLLDFMLAAIRANSDDKVVLISNY 519
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL--ISTRAGGLGLN 599
+ LD+ E+ ++ Y++ RLDG+ R +VD FN PS FL +S++AGG GLN
Sbjct: 520 TQTLDLFEQLARKRKYTYVRLDGTMTIKKRSKVVDRFN-DPSTDCFLFMLSSKAGGCGLN 578
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+ L
Sbjct: 579 LIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSL 638
Query: 660 SNIAV 664
S+ +
Sbjct: 639 SSTII 643
>sp|B4M9A8|RAD54_DROVI DNA repair and recombination protein RAD54-like OS=Drosophila
virilis GN=okr PE=3 SV=1
Length = 786
Score = 249 bits (636), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 278/541 (51%), Gaps = 65/541 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + TI K
Sbjct: 149 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLTWTLLRQSPDCKPTISK 208
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+++ PSS+++NWE EF++W + G +++ LE
Sbjct: 209 ---------AIVVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTTRTLEQFAMNTAT 259
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
CG VL+ S++++R++ IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 260 RCGTPVLLISYETFRLYSHILCKTEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 319
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ + GQ + + A E+ Q L
Sbjct: 320 GTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAILRGQNADSTDAERERALEKTQEL 379
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
V ++ + ++RRT + +L + K + VV ++ +Q + Y L+ +++
Sbjct: 380 VGLVNQCIIRRTNQILTKYLPV-KFEMVVCAKLTAVQLQLYTNFLKSDQVR--------- 429
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+L C L + L+++ NH +LI ++ + K
Sbjct: 430 ---------------RSLADCTDKTTLTALADITTLKKLCNHPDLI----YEKIAAREKG 470
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSYS 541
E + V P+ N + LS GK L+ ++ + A+ DK++L S
Sbjct: 471 FENSQNVLPPNYKPKDVNPE------LS-----GKFMLLDFMLAAIRANSDDKVVLISNY 519
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ LD+ E+ ++ YS+ RLDG+ R +VD FN + +F++S++AGG GLNL
Sbjct: 520 TQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFNDPATDCFLFMLSSKAGGCGLNL 579
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+ LS
Sbjct: 580 IGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLS 639
Query: 661 N 661
+
Sbjct: 640 S 640
>sp|O12944|RAD54_CHICK DNA repair and recombination protein RAD54-like (Fragment)
OS=Gallus gallus GN=RAD54L PE=2 SV=1
Length = 733
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 281/546 (51%), Gaps = 70/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL+ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 142 LRPHQREGVKFLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIE 201
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEAC----G 245
K +++ PSS+++NW E +W + G +++ I KL G
Sbjct: 202 K---------AMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRG 252
Query: 246 VEV----LITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+ V LI S++++R+H L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 253 LRVPSPILIISYETFRLHAEALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLI 312
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT + F+ ++ P+ G+ A E + +ER +
Sbjct: 313 SGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKE 372
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLL-QLPEIQCLINKDL 420
L++++ + L+RRT + + + K + VV C ++ LQ Y+ L Q ++ L +
Sbjct: 373 LISIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEGKI 431
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S S +T L+++ NH LI DK
Sbjct: 432 NVSSLSSITS---------------------------LKKLCNHPALIY-------DKCV 457
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLM-YSWASKGDKILLFS 539
++ E F +DL +S + + GKM L+ ++ + ++ DK++L S
Sbjct: 458 EEEE----GFMGALDLFPAGYSTKSV----EPQLSGKMLVLDYILAVTKSTSNDKVVLVS 509
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ EK + Y + RLDG+ R +V+ FNS S + +F++S++AGG GL
Sbjct: 510 NYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGL 569
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLS G++EE ++ RQ +K+
Sbjct: 570 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKA 629
Query: 659 LSNIAV 664
LS+ V
Sbjct: 630 LSSCVV 635
>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens
GN=RAD54L PE=1 SV=2
Length = 747
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 281/546 (51%), Gaps = 70/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNK-----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTIL 191
L HQREGVKFL++ ++ HG I+ D+MGLGKT+Q I + + + I
Sbjct: 153 LRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEID 212
Query: 192 KDNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVS--IYHGPNRDMILEKLEA------ 243
K +++ PSS+++NW E +W + G ++D I +KLE
Sbjct: 213 K---------AVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRG 263
Query: 244 --CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
+LI S++++R+H +L + + +VI DE HRLKN +++ Y A L T R+ +
Sbjct: 264 ARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
+GT +QN ++E ++L +V G LGT F++ ++ P+ G+ A E ++ +ER +
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAY-RRLLQLPEIQCLINKDL 420
L +++ + L+RRT + + + K + VV C ++ LQ Y R L Q + L+ +
Sbjct: 384 LTSIVNRCLIRRT-SDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLEGKM 442
Query: 421 PCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQR 480
S S +T L+++ NH LI +E D
Sbjct: 443 SVSSLSSITS---------------------------LKKLCNHPALIYDKCVEEEDG-- 473
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFS 539
F +DL +++ + + GKM L+ ++ S+ DK++L S
Sbjct: 474 ---------FVGALDLFPPGYSSKAL----EPQLSGKMLVLDYILAVTRSRSSDKVVLVS 520
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ EK + Y + RLDG+ R +V+ FNS S VF++S++AGG GL
Sbjct: 521 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGL 580
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+V+FDP+WNPA D QA R +R GQK+ ++RLLSAG++EE ++ RQ +K+
Sbjct: 581 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 640
Query: 659 LSNIAV 664
LS+ V
Sbjct: 641 LSSCVV 646
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 280/544 (51%), Gaps = 64/544 (11%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q +A + + + TI K
Sbjct: 152 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKPTINK 211
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+I+ PSS+++NWE EF++W + G +++ + LE
Sbjct: 212 ---------CIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQFSMNAST 262
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 263 RLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 322
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ + GQ + ++ A E+ Q L
Sbjct: 323 GTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRGQNADSTDKERDRALEKTQEL 382
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ + ++RRT + +L + K + V+ ++ +Q + Y L+ +++
Sbjct: 383 IKLVDQCIIRRTNQILTKYLPV-KFEMVICAKLTPIQLQLYTNFLKSDQVR--------- 432
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+L C L + L+++ +H LI ++
Sbjct: 433 ---------------RSLADCKEKASLTALADITTLKKLCSHPNLI---------CEKIA 468
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYS 541
AE +I + N + E LS GK + L+ ++ + + G DK++L S
Sbjct: 469 AEEKGFENSQNILPINYNPKGEINPELS-----GKFKLLDFMLAAIRAHGNDKVVLISNY 523
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
+ LD+ E+ ++ Y F RLDG+ R +VD FN S +F++S++AGG GLNL
Sbjct: 524 TQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNL 583
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+ LS
Sbjct: 584 IGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLS 643
Query: 661 NIAV 664
+ +
Sbjct: 644 STII 647
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/624 (28%), Positives = 305/624 (48%), Gaps = 80/624 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + + TI K
Sbjct: 156 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 215
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+++ PSS+++NWE EF++W G ++ + LE
Sbjct: 216 ---------AIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSAR 266
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+G
Sbjct: 267 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSG 326
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E Y+L ++V P LGT F+ ++ + GQ + E+ + A E+ Q L+
Sbjct: 327 TPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELI 386
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
++ + ++RRT + +L + K + V+ ++ +Q Y L+ +++
Sbjct: 387 GLVDQCIIRRTNQILTKYLPV-KFEMVICAKLTAIQLELYTNFLKSDQVR---------- 435
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
+L C+ L + L++I +H +LI ++ + K
Sbjct: 436 --------------RSLADCNEKASLTALADITTLKKICSHPDLIY----EKLTAREKGF 477
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSV 542
E + V + N + LS GK L+ ++ + ++G DK++L S
Sbjct: 478 ENSQNVLPSNYKPKDLNPE------LS-----GKFMLLDFMLAAIRAEGNDKVVLISNYT 526
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
+ LD+ E+ ++ Y F RLDG+ R +VD FN S +F++S++AGG GLNL+
Sbjct: 527 QTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLI 586
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+ LS+
Sbjct: 587 GANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSS 646
Query: 662 IAVSGKLEKRYFEGVQDCKEFQGELFGI-CNLFRDLSDNLFTSEII---------ESHEE 711
+ D K +LF N+ D D L + E +
Sbjct: 647 TIIDNNESAEKHFTRDDLK----DLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDC 702
Query: 712 QGQQQERHHCTNQGFKGLETHIVS 735
+ +HC+N +GL +I++
Sbjct: 703 TSHLSQWYHCSNN--RGLPDNILA 724
>sp|B3MMA5|RAD54_DROAN DNA repair and recombination protein RAD54-like OS=Drosophila
ananassae GN=okr PE=3 SV=1
Length = 791
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 313/620 (50%), Gaps = 72/620 (11%)
Query: 137 LLEHQREGVKFLYKLYKNK----HGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K +G I+ D+MGLGKT+Q + + + + S TI K
Sbjct: 159 LRPHQREGVRFMYECVEGKKGDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINK 218
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW---STFNVSIYHGPNRDMI--LEKLEAC--- 244
+++ PSS+++NWE EF++W +++ G + I LE+
Sbjct: 219 ---------AIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSSK 269
Query: 245 -GVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+G
Sbjct: 270 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSG 329
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E ++L ++V P LGT F+ ++ + GQ + E + A E+ Q L+
Sbjct: 330 TPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADSTEGERKKAIEKTQELI 389
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
++ + ++RRT + +L + K + V+ ++ +Q + Y L +++
Sbjct: 390 GLVDQCIIRRTNQILTKYLPI-KFEMVICVKLTAIQLQLYTNFLNSDQVR---------- 438
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
+L C+ L + L++I +H PD +
Sbjct: 439 --------------RSLADCNEKASLTALADITTLKKICSH-----------PDLIHQKI 473
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSV 542
E F +++ N + + + GK L+ ++ + + G DK++L S
Sbjct: 474 EAKEKGFENSQNVLPSNYKPKEICP----EWSGKFMLLDFMLAAIRAAGNDKVVLISNYT 529
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
+ LD+ E+ ++ Y F RLDG+ R +VD FN S+ +F++S++AGG GLNL+
Sbjct: 530 QTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAGGCGLNLI 589
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++G++EE + RQ +K+ LS+
Sbjct: 590 GANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQTHKKSLSS 649
Query: 662 IAV-SGKLEKRYF--EGVQDCKEFQGELFGICN---LFRDLSDNLFTSEIIESHEEQGQQ 715
+ + + +++F + ++D F ++ + + N+ T ES +
Sbjct: 650 TIIDNNESSEKHFTRDDLKDLFSFDQKILSDTHEKLKCKRCVQNIQTKPPSESTDCTSHL 709
Query: 716 QERHHCTNQGFKGLETHIVS 735
+ +HC+N +GL I++
Sbjct: 710 SQWYHCSNN--RGLPDSILA 727
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila
yakuba GN=okr PE=3 SV=2
Length = 784
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/543 (29%), Positives = 279/543 (51%), Gaps = 64/543 (11%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + + TI K
Sbjct: 156 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 215
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI--YHGPNRDMILEKLEA------- 243
+++ PSS+++NWE EF++W + G ++ + LE
Sbjct: 216 ---------AIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSR 266
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+G
Sbjct: 267 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSG 326
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E Y+L ++V P LGT F+ ++ + GQ + E + A E+ Q L+
Sbjct: 327 TPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEGERQRAIEKTQELI 386
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
++ + ++RRT + +L + K + V+ ++ +Q Y L+ +++
Sbjct: 387 GLVDQCIIRRTNQILTKYLPV-KFEMVICAKLTSIQLELYTNFLKSDQVR---------- 435
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDA 483
+L C+ L + L++I +H +LI ++ + K
Sbjct: 436 --------------RSLADCNEKASLTALADITTLKKICSHPDLI----YEKITAREKGF 477
Query: 484 ELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSYSV 542
E + V + + N + LS GK L+ ++ + + G DK++L S
Sbjct: 478 ENSQNVLPSNYNTKDLNPE------LS-----GKFMLLDFMLAAIRADGNDKVVLISNYT 526
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
+ LD+ E+ ++ Y F RLDG+ R +VD FN S +F++S++AGG GLNL+
Sbjct: 527 QTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLI 586
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSN 661
ANR+ +FDP+WNPA D QA R +R GQK+ ++R++++GS+EE + RQ +K+ LS+
Sbjct: 587 GANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSS 646
Query: 662 IAV 664
+
Sbjct: 647 TII 649
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 272/539 (50%), Gaps = 92/539 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EG+ +L + N+ IL D+MGLGKTIQ+I FL +
Sbjct: 858 QLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL--------------L 903
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLE----------- 242
+G LII P S I NWE EF W+ NV +YHG +R MI ++ E
Sbjct: 904 TGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMI-QQYEMYFRDSQGRII 962
Query: 243 --ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
A + +IT+F+ L+ ++W VI+DEAHRLKN+ KL + +++
Sbjct: 963 RGAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL 1022
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERK 359
LTGT +QN + EL++L ++ P + F +EF D LK +E+
Sbjct: 1023 LTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD--LK--------------TEEQV 1066
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
Q L A+L+ +LRR KE+ + + KE+ ++ ++++QK+ YR +L+ K+
Sbjct: 1067 QKLQAILKPMMLRRLKED-VEKKLAPKEETIIEVELTNIQKKYYRAILE---------KN 1116
Query: 420 LP-CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
S G+ T V ++ +++L++ NH LI
Sbjct: 1117 FSFLSKGAGQTNVPN-----------------LVNTMMELRKCCNHPYLI---------- 1149
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
K AE + G D +A + + ++S GK+ ++KL+ + G K+L+F
Sbjct: 1150 --KGAE--EKILGEFRDTYNPSASDFHLQAM--IQSAGKLVLIDKLLPKMKAGGHKVLIF 1203
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG
Sbjct: 1204 SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1263
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
+NL +A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ R K
Sbjct: 1264 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLK 1322
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 275/546 (50%), Gaps = 69/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + TI K
Sbjct: 149 LRPHQREGVRFMYECVEGKRGSFNGCIMADEMGLGKTLQCVTLTWTLLRQSADCKPTISK 208
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+++ PSS+++NWE EF++W + G +++ LE
Sbjct: 209 ---------AIVVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEETTRTLEQFAMNTST 259
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
CG VL+ S++++R++ IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 260 RCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 319
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ + GQ + + A + Q L
Sbjct: 320 GTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILRGQNADSTDTERERALLKTQEL 379
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ + ++RRT + +L + K + VV ++ +Q + Y L+ ++
Sbjct: 380 IGLVNQCIIRRTNQILTKYLPV-KFEMVVCAKLTAVQLQIYTNFLKSDQV---------- 428
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
C+ L + C+ L + L+++ NH +LI
Sbjct: 429 -----------CRSLAD---CNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKGFENS 474
Query: 483 AELASAVFGP-DIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFSY 540
+ A + P DI + + GK L+ ++ + A+ DK++L S
Sbjct: 475 QNVLPANYKPKDI----------------NPELSGKFMLLDFMLAAIRANSDDKVVLISN 518
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQVFL--ISTRAGGLGL 598
+ LD+ E+ ++ YS+ RLDG+ R +VD FN PS FL +S++AGG GL
Sbjct: 519 YTQTLDLFEQLARKRKYSYVRLDGTMTIKKRSKVVDRFN-DPSSDCFLFMLSSKAGGCGL 577
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+
Sbjct: 578 NLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKS 637
Query: 659 LSNIAV 664
LS+ +
Sbjct: 638 LSSTII 643
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 287/586 (48%), Gaps = 96/586 (16%)
Query: 128 QVPASINC-RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESS 186
Q P+ I L + Q GV ++ L+ GIL D+MGLGKT+QT+AFL+ +
Sbjct: 365 QQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLA------ 418
Query: 187 DSTILKDNKVDKKGYVLIICPSSVIQNWEIEFSRW-STFNVSIYHG--PNRDMI------ 237
+ + + G L++ P S + W+ + W S N Y G +R +I
Sbjct: 419 -------HSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFY 471
Query: 238 LEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRN 297
++ + +L+T+++ S+LS + W+ + +DEAHRLKN +S LY A + K N
Sbjct: 472 VDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSN 531
Query: 298 RIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAP----ERFIR 353
R+ +TGT +QN I EL L D++ PG RE L AP E +IR
Sbjct: 532 RLLITGTPLQNNIRELAALVDFLMPGKFEIREEIN------------LEAPDEEQEAYIR 579
Query: 354 IADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQ 413
E L+ Y+LRR K++ + + K + ++ +SDLQ Y+ +L
Sbjct: 580 SLQEH-------LQPYILRRLKKD-VEKSLPSKSERILRVELSDLQMYWYKNIL------ 625
Query: 414 CLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPR 473
LTQ +L L +V+L++ SNH L +
Sbjct: 626 --------TRNYRVLTQSISSGSQISL-----------LNIVVELKKASNHPYLF--DGV 664
Query: 474 DEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGD 533
+E Q+ +++ ++E GL + + GKM L+KL+ G
Sbjct: 665 EESWMQKINSQ---------------GRRDEVLKGL--IMNSGKMVLLDKLLSRLRRDGH 707
Query: 534 KILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTR 592
++L+FS VRMLDIL +L +GY RLDG+ P+ +R++ +D FN+ S VFL+STR
Sbjct: 708 RVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTR 767
Query: 593 AGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTR 652
AGGLG+NL++A+ V+IFD +WNP DLQA R+ R GQK HV+V+RLLS ++EE V R
Sbjct: 768 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLER 827
Query: 653 QVYKQQLSNIAVSGKLEKRYFEGVQD---CKEFQGEL-FGICNLFR 694
K L +S + + D +E L FG N+F+
Sbjct: 828 ARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFK 873
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 283/565 (50%), Gaps = 86/565 (15%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EG+ +L + N+ IL D+MGLGKTIQ+I FL+ +F +
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG------------ 507
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMI----LEKLEACG---- 245
G LII P S I NWE EF W+ N +YHG +R MI + +A G
Sbjct: 508 --IHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLS 565
Query: 246 ----VEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGL 301
V+IT+F+ L +++W VI+DEAHRLKN KL + +++ L
Sbjct: 566 GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLL 625
Query: 302 TGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQH 361
TGT +QN + EL++L +++ P + F E + + LK +E+ +
Sbjct: 626 TGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD-LK--------------TEEQVKK 670
Query: 362 LVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLP 421
L ++L+ +LRR K++ +L K++ ++ ++++QK+ YR +L+ K+
Sbjct: 671 LQSILKPMMLRRLKDDVEKNL-APKQETIIEVELTNIQKKYYRAILE---------KNF- 719
Query: 422 CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRK 481
S LT+ + NL + +++L++ NH LI N +E K +
Sbjct: 720 ----SFLTKGANQHNMPNL-----------INTMMELRKCCNHPYLI--NGAEE--KILE 760
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYS 541
D + PD L +++ GK+ ++KL+ + G K+L+FS
Sbjct: 761 DFRKTHSPDAPDFQLQAM------------IQAAGKLVLIDKLLPKLIAGGHKVLIFSQM 808
Query: 542 VRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNL 600
VR LDILE +LI++ Y++ R+DG NLRQ+ +D F S + VFL+ TRAGGLG+NL
Sbjct: 809 VRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINL 868
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ + K L
Sbjct: 869 TAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLD 928
Query: 661 NIAVSGKLEKRYFEGVQDCKEFQGE 685
+ K GVQ + + E
Sbjct: 929 KAVLQDINRKGGTNGVQQLSKMEVE 953
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus
GN=Rad54b PE=2 SV=1
Length = 886
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 189/634 (29%), Positives = 305/634 (48%), Gaps = 86/634 (13%)
Query: 44 PKSSLAQQLQRLGETYNFSLPQQNPETRREKAPVEKSNVFDDEEKEKEQEQEKFGRHQLG 103
P S+ Q Q G+ +N P+ NP T + E Q F RH
Sbjct: 211 PFKSVCQSTQAQGKRWNDCRPRHNPCTPNALV----------MPRPDENHQRMFNRH--- 257
Query: 104 QFQFDHTGPFEPLVLSKDGEYPIIQVPASINCRLLEHQREGVKFLYKLYKN-----KHGG 158
P+V ++ P ++ L HQ++G+ FLY+ K G
Sbjct: 258 ---------CSPIV-------DVVIDPHLVH-HLRPHQKDGIIFLYECVMGMRAVGKCGA 300
Query: 159 ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNKVDKKGYVLIICPSSVIQNWEIEF 218
IL D+MGLGKT+Q I+ + + + ++K LI+ P S++ NW EF
Sbjct: 301 ILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKT--------LIVTPGSLVNNWRKEF 352
Query: 219 SRW-STFNVSIYHGPNRDMILEKLEACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAH 277
+W + + I+ + E + + VLI S++ + + + ++I DE H
Sbjct: 353 QKWLGSERIKIFTVDQDHKVEEFINSTFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGH 412
Query: 278 RLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDE 337
RLKN K A L + LTGT +QN + E + L D+V PG LG+ +R+ Y+E
Sbjct: 413 RLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEE 472
Query: 338 PLKHGQRLTAPERFIRIADERKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSD 397
P+ + ++ + + + R L + +++LRRT +E I + K +NVVFC
Sbjct: 473 PIIISREPSSSKEERELGERRATELTRLTGRFILRRT-QEVINKYLPPKIENVVFCRPGA 531
Query: 398 LQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCL-- 455
LQ YR+LL+ ++ + L S + L + K+L N PCL
Sbjct: 532 LQIELYRKLLRSQSVRFCLQGLLENS--AHLICIGALKKLCN------------HPCLLF 577
Query: 456 --VKLQQISNHLELIKPNPRDEPDKQRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVK 513
VK ++ S+ E +++R + +VF G N + S+ +
Sbjct: 578 SSVKGKEFSSSC---------EENEERNLCQGLLSVFP-----AGYNP-----LQFSEEE 618
Query: 514 SCGKMRALEKLMYSWAS--KGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLR 571
S GK++ L KL+ +K++L S + L++LE+ R GY+ +RLDG TP + R
Sbjct: 619 S-GKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVSQR 677
Query: 572 QSLVDDFNSSPSKQ-VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQ 630
Q +VD FNS S +FL+S++AGG+GLNL+ + ++++D +WNPA D+QA R +R GQ
Sbjct: 678 QHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQ 737
Query: 631 KRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV 664
K V ++RLL+ G++EE +Y RQ+ KQ LS V
Sbjct: 738 KHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVV 771
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 283/546 (51%), Gaps = 69/546 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y + K G I+ D+MGLGKT+Q + + + + TI K
Sbjct: 153 LRPHQREGVRFMYDCVEGKKGNFNGCIMADEMGLGKTLQCVTLVWTLLRQSCECKPTITK 212
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+I+ PSS+++NWE EF++W + G +++ ++ LE
Sbjct: 213 ---------AIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKEDTIKALEQFSMNTST 263
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VL+ S++++RI+ +IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 264 RLGTPVLLISYETFRIYANILCQNEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 323
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ P+ GQ + ++ A E+ Q L
Sbjct: 324 GTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENPILKGQNTDSSDKERERALEKTQEL 383
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ + ++RRT + +L + K + V+ ++ +Q Y L+ +++
Sbjct: 384 IGLVNQCIIRRTNQILTKYLPV-KFEMVICVRLTSVQLEFYTNFLKSDKVR--------- 433
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI--KPNPRDEPDKQR 480
+L C+ L + L+++ +H +LI K RD+
Sbjct: 434 ---------------RSLADCNEKASLTALADITTLKKLCSHPDLIYEKMLARDKG---- 474
Query: 481 KDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSW-ASKGDKILLFS 539
F +++ N + + + + GK L+ ++ + A+ DK++L S
Sbjct: 475 ---------FENSQNILPTNYKPKDL----NPELSGKFMLLDFMLATIRANSDDKVVLIS 521
Query: 540 YSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGL 598
+ LD+ E+ ++ Y+F RLDG+ R +VD FN + +F++S++AGG GL
Sbjct: 522 NYTQTLDLFEQLARKRKYTFVRLDGTMTIKKRSKVVDRFNDPENDCFLFMLSSKAGGCGL 581
Query: 599 NLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQ 658
NL+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+
Sbjct: 582 NLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKS 641
Query: 659 LSNIAV 664
LS+ +
Sbjct: 642 LSSTII 647
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 280/549 (51%), Gaps = 79/549 (14%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L ++Q +G++++ LY N GIL D+MGLGKTIQTIAF+ + K
Sbjct: 865 VGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKK--------- 915
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGPN--RDMILEKLEACGVEVL 249
+++G LII P S + NW +EF +W+ I Y GP R + ++ + VL
Sbjct: 916 ----NQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVL 971
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMA-CLELKTRNRIGLTGTIMQN 308
+T+F+ +LS + W +I+DE HR+KN +SKL ++ R+ LTGT +QN
Sbjct: 972 LTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQN 1031
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERK----QHLVA 364
+ EL+ L ++V P + + F E+++ P + T + I + +E + L
Sbjct: 1032 NLPELWALLNFVLPKIFNSIKSFDEWFNTPFAN----TGGQDKIGLNEEEALLIIKRLHK 1087
Query: 365 VLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSC 424
VLR +L RR K++ + + K + V+ C +S LQ + Y+ Q+ + L
Sbjct: 1088 VLRPFLFRRLKKD-VEKELPDKVEKVIKCPLSGLQLKLYQ---QMKKHGMLF-------- 1135
Query: 425 GSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAE 484
V+ K + G + +++L++I NH + +D E
Sbjct: 1136 ------VDGEKGKTGIKGLQN--------TVMQLKKICNHPFIF------------EDVE 1169
Query: 485 LASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRM 544
A G ++DL+ ++ GK L++++ G K L+F ++
Sbjct: 1170 RAIDPSGTNVDLLW--------------RAAGKFELLDRILPKLFLTGHKTLMFFQMTQI 1215
Query: 545 LDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSK-QVFLISTRAGGLGLNLVSA 603
+ I+E +L K + + RLDGST S+ R SL+ FN S +F++STRAGGLGLNL +A
Sbjct: 1216 MTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTA 1275
Query: 604 NRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIA 663
+ V+IFD +WNP QDLQAQDR+ R GQ + V + RL++ S+EE + +R YK L
Sbjct: 1276 DTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKV 1335
Query: 664 V-SGKLEKR 671
+ +GK + +
Sbjct: 1336 IQAGKFDNK 1344
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 270/539 (50%), Gaps = 92/539 (17%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L E+Q EG+ +L + N+ IL D+MGLGKTIQ+I FL +
Sbjct: 859 QLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL--------------L 904
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGP--NRDMILEKLE----------- 242
+G LII P S I NWE EF W+ NV +YHG +R MI ++ E
Sbjct: 905 TGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMI-QQYEMYFRDSQGRII 963
Query: 243 --ACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIG 300
A + +IT+F+ L+ + W VI+DEAHRLKN+ KL + +++
Sbjct: 964 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL 1023
Query: 301 LTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADERK 359
LTGT +QN + EL++L ++ P + F +EF D LK +E+
Sbjct: 1024 LTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGD--LK--------------TEEQV 1067
Query: 360 QHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKD 419
Q L A+L+ +LRR KE+ + + KE+ ++ ++++QK+ YR +L+ K+
Sbjct: 1068 QKLQAILKPMMLRRLKED-VEKKLAPKEETIIEVELTNIQKKYYRAILE---------KN 1117
Query: 420 LP-CSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
S G+ T V ++ +++L++ NH LI
Sbjct: 1118 FSFLSKGAGQTNVPN-----------------LVNTMMELRKCCNHPYLI---------- 1150
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
K AE + G D A + + ++S GK+ ++KL+ + G K+L+F
Sbjct: 1151 --KGAE--EKILGEFRDTYNPAASDFHLQAM--IQSAGKLVLIDKLLPKMKAGGHKVLIF 1204
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S VR LDILE +LI K Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG
Sbjct: 1205 SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1264
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
+NL +A+ +IFD +WNP DLQAQ R R GQ + V V+RL++ S E ++ R K
Sbjct: 1265 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLK 1323
>sp|B4GS98|RAD54_DROPE DNA repair and recombination protein RAD54-like OS=Drosophila
persimilis GN=okr PE=3 SV=1
Length = 782
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 280/548 (51%), Gaps = 72/548 (13%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q +A + + + TI K
Sbjct: 152 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKPTINK 211
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRW--STFNVSIYHGPNRDMILEKLEA------- 243
+I+ PSS+++NWE EF++W + G +++ + LE
Sbjct: 212 ---------CIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQFSMNAST 262
Query: 244 -CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLT 302
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+
Sbjct: 263 RLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 322
Query: 303 GTIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHL 362
GT +QN + E ++L ++V P LGT F+ ++ + GQ + ++ A E+ Q L
Sbjct: 323 GTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRGQNADSTDKERDRALEKTQEL 382
Query: 363 VAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPC 422
+ ++ + ++RRT + +L + K + V+ ++ +Q + Y L+ +++
Sbjct: 383 IKLVDQCIIRRTNQILTKYLPV-KFEMVICAKLTPIQLQLYTNFLKSDQVR--------- 432
Query: 423 SCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+L C L + L+++ +H LI
Sbjct: 433 ---------------RSLADCKEKASLTALADITTLKKLCSHPNLIC------------- 464
Query: 483 AELASAVFG----PDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILL 537
++A+ G +I + N + E LS GK + L+ ++ + + G DK++L
Sbjct: 465 EKIAAGEKGFENSQNILPINYNPKGEINPELS-----GKFKLLDFMLAAIRAHGNDKVVL 519
Query: 538 FSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGL 596
S + LD+ E ++ Y F RLDG+ R +VD FN S +F++S++AGG
Sbjct: 520 ISNYTQTLDLFELLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGC 579
Query: 597 GLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
GLNL+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K
Sbjct: 580 GLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHK 639
Query: 657 QQLSNIAV 664
+ LS+ +
Sbjct: 640 KSLSSTII 647
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 267/540 (49%), Gaps = 88/540 (16%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L ++Q G+ +L LY+N GIL D+MGLGKT+QTI+ L + +
Sbjct: 179 KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYM-------------KHY 225
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLIT 251
+ G +++ P S + NW EF RW S+ +++ + + L +V +T
Sbjct: 226 RNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVT 285
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN +
Sbjct: 286 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLH 345
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL++L +++ P + + F ++D G Q+L + L VLR +L
Sbjct: 346 ELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV-------------ERLHMVLRPFL 392
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y R+L
Sbjct: 393 LRRIKADVEKSLPPKKEVKI-YVGLSKMQREWYTRIL----------------------- 428
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 429 ---MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 472
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D+ LV + GKM L+KL+ +G ++L+FS R+LDILE
Sbjct: 473 TTDMHLV---------------TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILED 517
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + + Y + RLDG TP + RQ ++ +N + +K VF++STRAGGLG+NL +A+ V+++
Sbjct: 518 YCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILY 577
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQ + V VFR ++ ++EE + R K +L +I + G+L
Sbjct: 578 DSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRL 637
>sp|B3NAN8|RAD54_DROER DNA repair and recombination protein RAD54-like OS=Drosophila
erecta GN=okr PE=3 SV=1
Length = 784
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 276/545 (50%), Gaps = 68/545 (12%)
Query: 137 LLEHQREGVKFLYKLYKNKHGG----ILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
L HQREGV+F+Y+ + K G I+ D+MGLGKT+Q + + + + TI K
Sbjct: 156 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 215
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI--YHGPNRDMILEKLEA------- 243
+++ PSS+++NWE EF++W + G ++ + LE
Sbjct: 216 ---------AIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSR 266
Query: 244 CGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTG 303
G VL+ S++++RI+ IL + +VI DE HRLKN + Y A + LKT+ R+ L+G
Sbjct: 267 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSG 326
Query: 304 TIMQNKIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLV 363
T +QN + E Y+L ++V P LGT F+ ++ + GQ + + + A + Q L+
Sbjct: 327 TPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTDAERQRAIAKTQELI 386
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
++ + ++RRT + +L + K + V+ ++ +Q Y L+ +++
Sbjct: 387 GLVDQCIIRRTNQILTKYLPV-KFEMVICAKLTSIQLELYTNFLKSDQVR---------- 435
Query: 424 CGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELI--KPNPRDEPDKQRK 481
+L C L + L++I +H LI K RD K
Sbjct: 436 --------------RSLADCKEKASLTALADITTLKKICSHPNLIYEKITARD------K 475
Query: 482 DAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKG-DKILLFSY 540
E + V + + N + LS GK L+ ++ + + G DK++L S
Sbjct: 476 GFENSQNVLPSNYNAKDLNPE------LS-----GKFMLLDFMLAAIRADGNDKVVLISN 524
Query: 541 SVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLN 599
+ LD+ E+ ++ Y F RLDG+ R +VD FN S +F++S++AGG GLN
Sbjct: 525 YTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLN 584
Query: 600 LVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQL 659
L+ ANR+ +FDP+WNPA D QA R +R GQK+ ++RL+++GS+EE + RQ +K+ L
Sbjct: 585 LIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSL 644
Query: 660 SNIAV 664
S+ +
Sbjct: 645 SSTII 649
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 285/547 (52%), Gaps = 72/547 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ L E+Q G++++ LY N GIL D+MGLGKTIQ+I+ + ++ + K
Sbjct: 466 VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLY--------EVKK 517
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWS-TFNVSIYHG-PN-RDMILEKLEACGVEVL 249
D G L+I P S I NW +EF +W+ + N IY G PN R + ++ +VL
Sbjct: 518 D-----IGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVL 572
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKL-YMACLELKTRNRIGLTGTIMQN 308
+T+++ S+LS+ +W +I+DE HR+KN +SKL + +TRNR+ LTGT +QN
Sbjct: 573 LTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQN 632
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKHGQRLTAPERFIRIADERKQHLVAVLRK 368
+ EL+ L ++V P + + F ++++ P + E + L VLR
Sbjct: 633 NLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRP 692
Query: 369 YLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPL 428
+LLRR K+E + + K + V+ C +S LQ++ Y+++L+ + L G+
Sbjct: 693 FLLRRLKKE-VEKDLPDKVEKVIKCKLSGLQQQLYQQMLK--------HNALFVGAGTEG 743
Query: 429 TQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASA 488
K L+N +++L++I NH P DE
Sbjct: 744 ATKGGIKGLNN--------------KIMQLRKICNH-----PFVFDE----------VEG 774
Query: 489 VFGPDIDLVGGNAQNESFIGLSDV--KSCGKMRALEKLMYSWASKGDKILLFSYSVRMLD 546
V P GN SD+ + GK L++++ + + G ++L+F +++D
Sbjct: 775 VVNPS----RGN---------SDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMD 821
Query: 547 ILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV-FLISTRAGGLGLNLVSANR 605
I+E FL K + RLDGST + R +++ FN+ S FL+STRAGGLGLNL +A+
Sbjct: 822 IMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADT 881
Query: 606 VVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV- 664
V+IFD +WNP QDLQAQDR+ R GQK V + RL++ S+EE++ R + K + +
Sbjct: 882 VIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ 941
Query: 665 SGKLEKR 671
+GK + +
Sbjct: 942 AGKFDNK 948
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 265/539 (49%), Gaps = 88/539 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N +L E+Q EGV +L + N IL D+MGLGKTIQ+I FL ++ K
Sbjct: 966 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKG---------- 1015
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN---RDMILEKL--------- 241
G L+I P S I NWE EF W+ NV +YHG R + L ++
Sbjct: 1016 ----IHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRV 1071
Query: 242 --EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ +IT+F+ L + W V++DEAHRLKN KL + +++
Sbjct: 1072 IKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKV 1131
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADER 358
LTGT +QN + EL++L ++ PG + F +EF D LK +E+
Sbjct: 1132 LLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGD--LK--------------TEEQ 1175
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L A+L+ +LRR KE+ +L KE+ ++ ++++QK+ YR +L+
Sbjct: 1176 VQKLQAILKPMMLRRLKEDVEKNL-APKEETIIEVELTNIQKKYYRAILE---------- 1224
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ L G + P +L +++L++ NH LI
Sbjct: 1225 -------------KNFAFLSKGGGQANVPN--LLNTMMELRKCCNHPYLIN-------GA 1262
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
+ K E NA + F + +++ GK+ ++KL+ + G ++L+F
Sbjct: 1263 EEKILEEFKETH---------NADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1313
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG
Sbjct: 1314 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLG 1373
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
+NL +A+ +IFD +WNP DLQAQ R R GQ + V ++RL++ S E ++ + K
Sbjct: 1374 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK 1432
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 282/552 (51%), Gaps = 84/552 (15%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+ +L E+Q G++++ LY N GIL D+MGLGKTIQTI+ + + K +
Sbjct: 413 VGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQN------ 466
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHGPN--RDMILEKLEACGVEVL 249
G L+I P S + NW +EF RW+ V I Y GP R + ++ +VL
Sbjct: 467 -------GPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVL 519
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLE-LKTRNRIGLTGTIMQN 308
+T+++ +LS + W +I+DE HR+KN +SKL +R R+ LTGT +QN
Sbjct: 520 LTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQN 579
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH--GQ---RLTAPERFIRIADERKQHLV 363
+ EL+ L ++V P + + F E+++ P + GQ LT E + I R+ H
Sbjct: 580 NLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVI---RRLH-- 634
Query: 364 AVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCS 423
VLR +LLRR K++ L K + V+ C MS LQ++ Y ++ +
Sbjct: 635 KVLRPFLLRRLKKDVEAEL-PDKVEKVIRCQMSGLQQKLYYQMKK--------------- 678
Query: 424 CGSPLTQVECCKR-LDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
+ VE KR + G + +++L++I NH + +D
Sbjct: 679 --HGMLYVEDAKRGKTGIKGLQN--------TVMQLKKICNHPFVF------------ED 716
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
E + G + D++ + GK L++++ G +IL+F
Sbjct: 717 VERSIDPTGFNYDMLW--------------RVSGKFELLDRILPKLFRSGHRILMFFQMT 762
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQV--FLISTRAGGLGLNL 600
++++I+E +L + + + RLDGST ++ R L+ FN P+ +V FL+STRAGGLGLNL
Sbjct: 763 QIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFN-DPTAEVNLFLLSTRAGGLGLNL 821
Query: 601 VSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLS 660
+A+ V+IFD +WNP QDLQAQDR+ R GQ + V ++RL++ S+EE + R YK +
Sbjct: 822 QTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDID 881
Query: 661 NIAV-SGKLEKR 671
+ +GK + +
Sbjct: 882 GKVIQAGKFDNK 893
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 173/588 (29%), Positives = 286/588 (48%), Gaps = 89/588 (15%)
Query: 136 RLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKDNK 195
+L ++Q G+ +L LY+N GIL D+MGLGKT+QTI+ L + +
Sbjct: 178 KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYM-------------KHY 224
Query: 196 VDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPNRD----MILEKLEACGVEVLIT 251
+ G +++ P S + NW EF +W S+ +++ + + L +V +T
Sbjct: 225 RNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVT 284
Query: 252 SFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRIGLTGTIMQNKIM 311
S++ S+ + NW +++DEAHR+KNEKSKL E KT NR+ LTGT +QN +
Sbjct: 285 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLH 344
Query: 312 ELYNLFDWVAPGSLGTREHFREFYDEPLKHG-QRLTAPERFIRIADERKQHLVAVLRKYL 370
EL++L +++ P + + F ++D G Q+L + L VLR +L
Sbjct: 345 ELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV-------------ERLHMVLRPFL 391
Query: 371 LRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSPLTQ 430
LRR K + L KE + + +S +Q+ Y R+L
Sbjct: 392 LRRIKADVEKSLPPKKEVKI-YVGLSKMQREWYTRIL----------------------- 427
Query: 431 VECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKDAELASAVF 490
K +D L+ +L L++L++ NH L D +
Sbjct: 428 ---MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLF-------------DGAEPGPPY 471
Query: 491 GPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSVRMLDILEK 550
D+ LV + GKM L+KL+ +G ++L+FS R+LDILE
Sbjct: 472 TTDMHLV---------------TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILED 516
Query: 551 FLIRKGYSFSRLDGSTPSNLRQSLVDDFNS-SPSKQVFLISTRAGGLGLNLVSANRVVIF 609
+ + + Y + RLDG TP + RQ ++ +N + +K VF++STRAGGLG+NL +A+ V+++
Sbjct: 517 YCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILY 576
Query: 610 DPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYKQQLSNIAV-SGKL 668
D +WNP DLQA DR+ R GQ + V VFR ++ ++EE + R K +L +I + G+L
Sbjct: 577 DSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRL 636
Query: 669 EKRYFEGVQDCKEFQGELFGICNLFRDLSDNLFTSEIIESHEEQGQQQ 716
+ + + Q G ++F ++ T E I+ E+G ++
Sbjct: 637 VDQNLNKIGKDEMLQMIRHGATHVFAS-KESEITDEDIDGILERGAKK 683
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 265/539 (49%), Gaps = 88/539 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N +L E+Q EGV +L + N IL D+MGLGKTIQ+I FL ++ K
Sbjct: 965 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKG---------- 1014
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN---RDMILEKL--------- 241
G L+I P S I NWE EF W+ NV +YHG R + L ++
Sbjct: 1015 ----IHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRV 1070
Query: 242 --EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ +IT+F+ L + W V++DEAHRLKN KL + +++
Sbjct: 1071 IKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKV 1130
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADER 358
LTGT +QN + EL++L ++ P + F +EF D LK +E+
Sbjct: 1131 LLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD--LK--------------TEEQ 1174
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L A+L+ +LRR KE+ +L KE+ ++ ++++QK+ YR +L+
Sbjct: 1175 VQKLQAILKPMMLRRLKEDVEKNL-APKEETIIEVELTNIQKKYYRAILE---------- 1223
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ L G + P +L +++L++ NH LI
Sbjct: 1224 -------------KNFTFLSKGGGQANVPN--LLNTMMELRKCCNHPYLIN-------GA 1261
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
+ K E NA++ F + +++ GK+ ++KL+ + G ++L+F
Sbjct: 1262 EEKILEEFKETH---------NAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1312
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG
Sbjct: 1313 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1372
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
+NL +A+ +IFD +WNP DLQAQ R R GQ + V ++RL++ S E ++ + K
Sbjct: 1373 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK 1431
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 265/539 (49%), Gaps = 88/539 (16%)
Query: 134 NCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILKD 193
N +L E+Q EGV +L + N IL D+MGLGKTIQ+I FL ++ K
Sbjct: 955 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKG---------- 1004
Query: 194 NKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSIYHGPN---RDMILEKL--------- 241
G L+I P S I NWE EF W+ NV +YHG R + L ++
Sbjct: 1005 ----IHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRV 1060
Query: 242 --EACGVEVLITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMACLELKTRNRI 299
+ +IT+F+ L + W V++DEAHRLKN KL + +++
Sbjct: 1061 IKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKV 1120
Query: 300 GLTGTIMQNKIMELYNLFDWVAPGSLGTREHF-REFYDEPLKHGQRLTAPERFIRIADER 358
LTGT +QN + EL++L ++ P + F +EF D LK +E+
Sbjct: 1121 LLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGD--LK--------------TEEQ 1164
Query: 359 KQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINK 418
Q L A+L+ +LRR KE+ +L KE+ ++ ++++QK+ YR +L+
Sbjct: 1165 VQKLQAILKPMMLRRLKEDVEKNL-APKEETIIEVELTNIQKKYYRAILE---------- 1213
Query: 419 DLPCSCGSPLTQVECCKRLDNLDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDK 478
+ L G + P +L +++L++ NH LI
Sbjct: 1214 -------------KNFTFLSKGGGQANVPN--LLNTMMELRKCCNHPYLIN-------GA 1251
Query: 479 QRKDAELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLF 538
+ K E NA++ F + +++ GK+ ++KL+ + G ++L+F
Sbjct: 1252 EEKILEEFKETH---------NAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1302
Query: 539 SYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLG 597
S VR LDILE +LI++ Y + R+DG NLRQ+ +D F+ S + VFL+ TRAGGLG
Sbjct: 1303 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1362
Query: 598 LNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
+NL +A+ +IFD +WNP DLQAQ R R GQ + V ++RL++ S E ++ + K
Sbjct: 1363 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK 1421
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 265/535 (49%), Gaps = 74/535 (13%)
Query: 133 INCRLLEHQREGVKFLYKLYKNKHGGILGDDMGLGKTIQTIAFLAAVFGKDESSDSTILK 192
+N L ++Q +G+++L LY N GIL D+MGLGKTIQTIA + + +++
Sbjct: 742 VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI-----------TYLME 790
Query: 193 DNKVDKKGYVLIICPSSVIQNWEIEFSRWSTFNVSI-YHG--PNRDMILEKLEACGVEVL 249
+++ G LII P S + NW EF +W+ V + Y G R + +L + VL
Sbjct: 791 HKRIN--GPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVL 848
Query: 250 ITSFDSYRIHGSILSEVNWEIVIVDEAHRLKNEKSKLYMAC-LELKTRNRIGLTGTIMQN 308
+T+++ IL+++ W+ +IVDE HR+KN KL R+ LTGT +QN
Sbjct: 849 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 908
Query: 309 KIMELYNLFDWVAPGSLGTREHFREFYDEPLKH-GQRLTAPERFIRIADERKQHLVAVLR 367
K+ EL+ L +++ P + F ++++ P G+++ E + R L VLR
Sbjct: 909 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRR---LHKVLR 965
Query: 368 KYLLRRTKEETIGHLMMGKEDNVVFCTMSDLQKRAYRRLLQLPEIQCLINKDLPCSCGSP 427
+LLRR K+E L K + V+ C MS LQ+ YR + + G
Sbjct: 966 PFLLRRLKKEVEAQL-PEKVEYVIKCDMSALQRVLYRHM---------------QAKGVL 1009
Query: 428 LTQVECCKRLDNLDGCD-----SCPFCLVLPCLVKLQQISNHLELIKPNPRDEPDKQRKD 482
LT DG + ++ +++L++I NH +
Sbjct: 1010 LT-----------DGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF-------------- 1044
Query: 483 AELASAVFGPDIDLVGGNAQNESFIGLSDVKSCGKMRALEKLMYSWASKGDKILLFSYSV 542
+ F + GG Q GL ++ GK L++++ + K+LLF
Sbjct: 1045 -QHIEESFSEHLGFTGGIVQ-----GLDLYRASGKFELLDRILPKLRATNHKVLLFCQMT 1098
Query: 543 RMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ-VFLISTRAGGLGLNLV 601
++ I+E + +G+ + RLDG+T + R L+ FN S+ +FL+STRAGGLGLNL
Sbjct: 1099 SLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ 1158
Query: 602 SANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIVFRLLSAGSLEELVYTRQVYK 656
SA+ V+IFD +WNP QDLQAQDR+ R GQ+ V V RL + S+EE + YK
Sbjct: 1159 SADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYK 1213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329,219,864
Number of Sequences: 539616
Number of extensions: 14444978
Number of successful extensions: 48594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 46528
Number of HSP's gapped (non-prelim): 1450
length of query: 875
length of database: 191,569,459
effective HSP length: 126
effective length of query: 749
effective length of database: 123,577,843
effective search space: 92559804407
effective search space used: 92559804407
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)