Your job contains 1 sequence.
>044037
MSRHTPVGSDHERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLT
FYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLI
YAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVAAKQA
VKRYVPI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044037
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030260 - symbol:TIM23-2 "translocase inner me... 627 2.7e-61 1
TAIR|locus:2007893 - symbol:TIM23-1 "AT1G17530" species:3... 611 1.3e-59 1
TAIR|locus:2084913 - symbol:TIM23-3 "translocase inner me... 398 4.9e-37 1
POMBASE|SPCC16A11.09c - symbol:tim23 "TIM23 translocase c... 178 1.0e-13 1
ASPGD|ASPL0000008496 - symbol:AN6348 species:162425 "Emer... 177 1.3e-13 1
CGD|CAL0003881 - symbol:TIM23 species:5476 "Candida albic... 151 7.4e-11 1
UNIPROTKB|Q59YG5 - symbol:TIM23 "Putative uncharacterized... 151 7.4e-11 1
SGD|S000005300 - symbol:TIM23 "Essential component of the... 148 1.5e-10 1
GENEDB_PFALCIPARUM|PF13_0300 - symbol:PF13_0300 "mitochon... 146 2.5e-10 1
UNIPROTKB|Q8IDE0 - symbol:PF13_0300 "Mitochondrial inner ... 146 2.5e-10 1
UNIPROTKB|E1BR29 - symbol:TIMM23 "Uncharacterized protein... 113 1.2e-05 1
RGD|3863 - symbol:Timm23 "translocase of inner mitochondr... 113 1.4e-05 1
UNIPROTKB|F1SDW3 - symbol:TIMM23 "Uncharacterized protein... 110 4.3e-05 1
RGD|1559672 - symbol:RGD1559672 "similar to Translocase o... 110 4.3e-05 1
UNIPROTKB|Q5XIW0 - symbol:Timm23 "RCG62963" species:10116... 110 4.3e-05 1
ZFIN|ZDB-GENE-020419-17 - symbol:timm23 "translocase of i... 109 6.4e-05 1
UNIPROTKB|A4IFL0 - symbol:TIMM23 "Mitochondrial import in... 109 6.5e-05 1
UNIPROTKB|O14925 - symbol:TIMM23 "Mitochondrial import in... 109 6.5e-05 1
UNIPROTKB|J9NUG0 - symbol:TIMM23 "Uncharacterized protein... 100 0.00063 1
WB|WBGene00008164 - symbol:C47G2.3 species:6239 "Caenorha... 102 0.00066 1
>TAIR|locus:2030260 [details] [associations]
symbol:TIM23-2 "translocase inner membrane subunit 23-2"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=IEA;ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA;ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR005681 InterPro:IPR003397 Pfam:PF02466 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006886 GO:GO:0005743
GO:GO:0005744 EMBL:AC010926 GO:GO:0015450 eggNOG:NOG278269
HOGENOM:HOG000166435 ProtClustDB:CLSN2715184 EMBL:U18126
EMBL:AY463973 EMBL:AY072498 EMBL:AY042892 EMBL:AY088456
IPI:IPI00532439 PIR:S71194 RefSeq:NP_177419.1 UniGene:At.358
UniGene:At.75606 PaxDb:Q38820 PRIDE:Q38820
EnsemblPlants:AT1G72750.1 GeneID:843607 KEGG:ath:AT1G72750
GeneFarm:3041 TAIR:At1g72750 InParanoid:Q38820 OMA:LAQRRSW
PhylomeDB:Q38820 Genevestigator:Q38820 TIGRFAMs:TIGR00983
Uniprot:Q38820
Length = 188
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 117/182 (64%), Positives = 138/182 (75%)
Query: 9 SDHERDPETRLYNPYAELNLP---AQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGT 65
SDH D TRLYNPY +P +Q LYKLPT+PEFLF+EE++ QRRSWGENLTFYTGT
Sbjct: 7 SDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGT 66
Query: 66 AYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGME 125
AYL GSV+GA++G+ + KS E GDT KLKINR+LNSSG +GR+WGNR+G+IGL+YAG+E
Sbjct: 67 AYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIE 126
Query: 126 SGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSXXXXXXXXXXXXXXXXXXXXXXKRYV 185
SG+VAATDRDDVW+SV AGLGTGAVCRAARG+RS KRYV
Sbjct: 127 SGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYV 186
Query: 186 PI 187
PI
Sbjct: 187 PI 188
>TAIR|locus:2007893 [details] [associations]
symbol:TIM23-1 "AT1G17530" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005744
"mitochondrial inner membrane presequence translocase complex"
evidence=ISS;TAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=ISS]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA;ISS;TAS] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006626 "protein
targeting to mitochondrion" evidence=TAS] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=RCA] [GO:0010351 "lithium ion transport"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR003397 Pfam:PF02466 GO:GO:0016021
EMBL:CP002684 GO:GO:0006626 GO:GO:0005744 EMBL:AC022492
GO:GO:0015450 EMBL:AY029217 EMBL:AY463972 EMBL:AY045586
EMBL:AY093787 IPI:IPI00516729 RefSeq:NP_564028.1 UniGene:At.22998
STRING:Q9LNQ1 PaxDb:Q9ARG3 PRIDE:Q9LNQ1 EnsemblPlants:AT1G17530.1
GeneID:838327 KEGG:ath:AT1G17530 GeneFarm:3040 TAIR:At1g17530
eggNOG:NOG278269 HOGENOM:HOG000166435 InParanoid:Q9LNQ1 OMA:ENTRLYH
PhylomeDB:Q9LNQ1 ProtClustDB:CLSN2715184 Genevestigator:Q9LNQ1
Uniprot:Q9LNQ1
Length = 187
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 117/181 (64%), Positives = 135/181 (74%)
Query: 9 SDHERDPETRLYNPYAELNLP--AQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTA 66
SDHE D TRLY+PY +P +Q LYKLPT+PEFLF+EES+ QRRSWGENLTFYTGT
Sbjct: 7 SDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTG 66
Query: 67 YLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMES 126
YLAGSV+GA+ G+FS KS E GDT KLKINR+LNSSG +GR+WGNRVG++GLIYAG+ES
Sbjct: 67 YLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIES 126
Query: 127 GVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSXXXXXXXXXXXXXXXXXXXXXXKRYVP 186
GVVA TD+DDVW+SV AGLGTGAV RAARG+RS KRY
Sbjct: 127 GVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAH 186
Query: 187 I 187
I
Sbjct: 187 I 187
>TAIR|locus:2084913 [details] [associations]
symbol:TIM23-3 "translocase inner membrane subunit 23-3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005744 "mitochondrial inner membrane presequence
translocase complex" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=ISS] [GO:0016114
"terpenoid biosynthetic process" evidence=RCA] InterPro:IPR003397
Pfam:PF02466 GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AC009465 EMBL:AC011437 eggNOG:NOG278269 HOGENOM:HOG000166435
EMBL:AY463974 EMBL:BT025747 IPI:IPI00529611 RefSeq:NP_187131.1
UniGene:At.24856 EnsemblPlants:AT3G04800.1 GeneID:819640
KEGG:ath:AT3G04800 GeneFarm:3042 TAIR:At3g04800 InParanoid:Q9S837
OMA:ESLKIRT PhylomeDB:Q9S837 ProtClustDB:CLSN2914704
Genevestigator:Q9S837 Uniprot:Q9S837
Length = 188
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 80/178 (44%), Positives = 109/178 (61%)
Query: 11 HERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYLAG 70
H++ + R YNPY ++NLP + LY+LPT+PEFLF EE+ +R +WGENLTF+TG Y G
Sbjct: 11 HQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTG 70
Query: 71 SVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVA 130
SV GA G + ++ E+G++LK++ NR+LNS G R GN +G +GL++A MESGV
Sbjct: 71 SVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTY 130
Query: 131 ATDRDD-VWSSVAAGLGTGAVCRAARGIRSXXXXXXXXXXXXXXXXXXXXXXKRYVPI 187
D DD ++V AGL TG + RAA G RS KR+VPI
Sbjct: 131 MRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
>POMBASE|SPCC16A11.09c [details] [associations]
symbol:tim23 "TIM23 translocase complex subunit Tim23
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005744 "mitochondrial inner
membrane presequence translocase complex" evidence=ISO] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030150 "protein import into mitochondrial
matrix" evidence=ISO] InterPro:IPR005681 InterPro:IPR003397
PomBase:SPCC16A11.09c Pfam:PF02466 GO:GO:0016021 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005744 GO:GO:0030150 GO:GO:0015450
eggNOG:COG5596 HOGENOM:HOG000166435 TIGRFAMs:TIGR00983 PIR:T41082
RefSeq:NP_587996.1 STRING:Q9USM7 EnsemblFungi:SPCC16A11.09c.1
GeneID:2538784 KEGG:spo:SPCC16A11.09c OMA:TKDITST OrthoDB:EOG4BP4N0
NextBio:20799966 Uniprot:Q9USM7
Length = 210
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 49/152 (32%), Positives = 78/152 (51%)
Query: 9 SDHERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYL 68
S E DP +L+ P A+L+ P L L + R W ++L + TGT+YL
Sbjct: 35 SGSEFDP-AKLH-PLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYL 92
Query: 69 AGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGV 128
+G G GL K + + +L++N +LN G GN +GV+ L+Y G+ S +
Sbjct: 93 SGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINS-L 151
Query: 129 VAATDRDDVW-SSVAAGLGTGAVCRAARGIRS 159
+ + W +SVAAG TGA+ ++ RG+R+
Sbjct: 152 IGYKRQKHGWENSVAAGALTGALYKSTRGLRA 183
>ASPGD|ASPL0000008496 [details] [associations]
symbol:AN6348 species:162425 "Emericella nidulans"
[GO:0005744 "mitochondrial inner membrane presequence translocase
complex" evidence=IEA] [GO:0030943 "mitochondrion targeting
sequence binding" evidence=IEA] [GO:0015266 "protein channel
activity" evidence=IEA] [GO:0030150 "protein import into
mitochondrial matrix" evidence=IEA] InterPro:IPR003397 Pfam:PF02466
GO:GO:0016021 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG5596
HOGENOM:HOG000166435 OrthoDB:EOG4BP4N0 OMA:SDDLCYG
RefSeq:XP_663952.1 STRING:Q5AZD2 EnsemblFungi:CADANIAT00006636
GeneID:2871248 KEGG:ani:AN6348.2 Uniprot:Q5AZD2
Length = 205
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 15 PETRLYNPYAELNLPAQNLYKLPTNP-EFLFSEESIHQRRSWGENLTFYTGTAYLAGSVS 73
P+ +P A LN + L + + L +S+ R W ++L + TGT Y+
Sbjct: 37 PDPSQLHPLAGLNQDTLDYITLEDSALDQLPGSQSVLPSRGWSDDLCYGTGTTYVTALAI 96
Query: 74 GAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATD 133
G A GL K K+++N VLNS G GN GV+ ++Y G+ S A
Sbjct: 97 GGAWGLAEGLKRTPVTAPPKIRLNGVLNSITRRGPFLGNSAGVVAMVYNGLNSFAGYARG 156
Query: 134 RDDVWSSVAAGLGTGAVCRAARGIR 158
+ D +S+AAG +G V ++ RG++
Sbjct: 157 KHDAANSIAAGAVSGMVFKSTRGLK 181
>CGD|CAL0003881 [details] [associations]
symbol:TIM23 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005744 "mitochondrial inner
membrane presequence translocase complex" evidence=IEA] [GO:0030943
"mitochondrion targeting sequence binding" evidence=IEA]
[GO:0015266 "protein channel activity" evidence=IEA] [GO:0030150
"protein import into mitochondrial matrix" evidence=IEA]
InterPro:IPR005681 InterPro:IPR003397 CGD:CAL0003881 Pfam:PF02466
GO:GO:0016021 GO:GO:0005886 GO:GO:0006886 GO:GO:0005744
EMBL:AACQ01000101 EMBL:AACQ01000099 GO:GO:0015450 eggNOG:COG5596
HOGENOM:HOG000166435 TIGRFAMs:TIGR00983 RefSeq:XP_714535.1
RefSeq:XP_714631.1 STRING:Q59YG5 GeneID:3643709 GeneID:3643777
KEGG:cal:CaO19.1361 KEGG:cal:CaO19.8941 Uniprot:Q59YG5
Length = 218
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 53 RSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGN 112
RSW ++L + TG YL G G G K++ + K+K+N +LN+ G GN
Sbjct: 88 RSWTDDLCYGTGAVYLLGLGIGGLYGFQQGIKTLPESAPSKVKLNHILNNITKRGPFLGN 147
Query: 113 RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIR 158
GV+ L Y ++S + ++ D +SV AG GA+ +++ G++
Sbjct: 148 SAGVLALTYNLIDSTIDGIREKHDDLNSVTAGALAGALFKSSAGLK 193
>UNIPROTKB|Q59YG5 [details] [associations]
symbol:TIM23 "Putative uncharacterized protein TIM23"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR005681 InterPro:IPR003397
CGD:CAL0003881 Pfam:PF02466 GO:GO:0016021 GO:GO:0005886
GO:GO:0006886 GO:GO:0005744 EMBL:AACQ01000101 EMBL:AACQ01000099
GO:GO:0015450 eggNOG:COG5596 HOGENOM:HOG000166435
TIGRFAMs:TIGR00983 RefSeq:XP_714535.1 RefSeq:XP_714631.1
STRING:Q59YG5 GeneID:3643709 GeneID:3643777 KEGG:cal:CaO19.1361
KEGG:cal:CaO19.8941 Uniprot:Q59YG5
Length = 218
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 53 RSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGN 112
RSW ++L + TG YL G G G K++ + K+K+N +LN+ G GN
Sbjct: 88 RSWTDDLCYGTGAVYLLGLGIGGLYGFQQGIKTLPESAPSKVKLNHILNNITKRGPFLGN 147
Query: 113 RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIR 158
GV+ L Y ++S + ++ D +SV AG GA+ +++ G++
Sbjct: 148 SAGVLALTYNLIDSTIDGIREKHDDLNSVTAGALAGALFKSSAGLK 193
>SGD|S000005300 [details] [associations]
symbol:TIM23 "Essential component of the TIM23 complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA] [GO:0015266
"protein channel activity" evidence=IDA] [GO:0030943 "mitochondrion
targeting sequence binding" evidence=IMP;IDA] [GO:0030150 "protein
import into mitochondrial matrix" evidence=IMP] [GO:0005744
"mitochondrial inner membrane presequence translocase complex"
evidence=IEA;IPI] [GO:0016021 "integral to membrane"
evidence=IEA;ISM] [GO:0016020 "membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] Reactome:REACT_85873 InterPro:IPR005681
InterPro:IPR003397 SGD:S000005300 Pfam:PF02466 GO:GO:0016021
GO:GO:0005758 EMBL:BK006947 Reactome:REACT_118590 GO:GO:0005744
GO:GO:0030150 TCDB:3.A.8.1.1 GO:GO:0015266 RefSeq:NP_014414.3
GeneID:855751 KEGG:sce:YNR017W RefSeq:NP_014421.3 GeneID:855758
KEGG:sce:YNR024W KO:K12594 GO:GO:0015450 eggNOG:COG5596
HOGENOM:HOG000166435 TIGRFAMs:TIGR00983 GO:GO:0030943
GeneTree:ENSGT00390000001094 OrthoDB:EOG4BP4N0 EMBL:X71633
EMBL:X74161 EMBL:Z71632 PIR:S36139 ProteinModelPortal:P32897
DIP:DIP-2451N IntAct:P32897 MINT:MINT-1359281 STRING:P32897
PaxDb:P32897 PeptideAtlas:P32897 EnsemblFungi:YNR017W CYGD:YNR017w
OMA:SDDLCYG BindingDB:P32897 ChEMBL:CHEMBL1741180 NextBio:980166
Genevestigator:P32897 GermOnline:YNR017W Uniprot:P32897
Length = 222
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 38/143 (26%), Positives = 66/143 (46%)
Query: 16 ETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYLAGSVSGA 75
+T +P A L+ + L L + + R W ++L + TG YL G G
Sbjct: 54 DTARLHPLAGLDKGVEYLDLEEEQLSSLEGSQGLIPSRGWTDDLCYGTGAVYLLGLGIGG 113
Query: 76 AIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRD 135
G+ +++ KL++N VLN G GN G++ L Y + S + A +
Sbjct: 114 FSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKH 173
Query: 136 DVWSSVAAGLGTGAVCRAARGIR 158
D S+ AG TGA+ ++++G++
Sbjct: 174 DTAGSIGAGALTGALFKSSKGLK 196
>GENEDB_PFALCIPARUM|PF13_0300 [details] [associations]
symbol:PF13_0300 "mitochondrial inner membrane
translocase, putative" species:5833 "Plasmodium falciparum"
[GO:0005744 "mitochondrial inner membrane presequence translocase
complex" evidence=ISS] [GO:0006626 "protein targeting to
mitochondrion" evidence=ISS] InterPro:IPR003397 Pfam:PF02466
GO:GO:0016021 GO:GO:0006626 GO:GO:0005744 EMBL:AL844509
RefSeq:XP_001350273.1 ProteinModelPortal:Q8IDE0 PRIDE:Q8IDE0
EnsemblProtists:PF13_0300:mRNA GeneID:814263 KEGG:pfa:PF13_0300
EuPathDB:PlasmoDB:PF3D7_1356200 HOGENOM:HOG000281677 OMA:NDEIYNS
ProtClustDB:CLSZ2432163 Uniprot:Q8IDE0
Length = 167
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 53 RSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGN 112
R WGE L + G AY +G + G GL + M+ G T KL +N VLNS+ G S N
Sbjct: 39 RQWGEKLVYSVGLAYGSGLLLGGGCGLINGI--MKGGKTKKLFLNSVLNSTSVIGPSVAN 96
Query: 113 RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAA 154
++ + +I+ + + V T D++++S AG G + +++
Sbjct: 97 QMASLTMIFYALNNMVKLITKNDEIYNSSIAGFLAGCIYKSS 138
>UNIPROTKB|Q8IDE0 [details] [associations]
symbol:PF13_0300 "Mitochondrial inner membrane translocase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005744
"mitochondrial inner membrane presequence translocase complex"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] InterPro:IPR003397 Pfam:PF02466 GO:GO:0016021
GO:GO:0006626 GO:GO:0005744 EMBL:AL844509 RefSeq:XP_001350273.1
ProteinModelPortal:Q8IDE0 PRIDE:Q8IDE0
EnsemblProtists:PF13_0300:mRNA GeneID:814263 KEGG:pfa:PF13_0300
EuPathDB:PlasmoDB:PF3D7_1356200 HOGENOM:HOG000281677 OMA:NDEIYNS
ProtClustDB:CLSZ2432163 Uniprot:Q8IDE0
Length = 167
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 53 RSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGN 112
R WGE L + G AY +G + G GL + M+ G T KL +N VLNS+ G S N
Sbjct: 39 RQWGEKLVYSVGLAYGSGLLLGGGCGLINGI--MKGGKTKKLFLNSVLNSTSVIGPSVAN 96
Query: 113 RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAA 154
++ + +I+ + + V T D++++S AG G + +++
Sbjct: 97 QMASLTMIFYALNNMVKLITKNDEIYNSSIAGFLAGCIYKSS 138
>UNIPROTKB|E1BR29 [details] [associations]
symbol:TIMM23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005681 InterPro:IPR003397 Pfam:PF02466
GO:GO:0016021 GO:GO:0006886 GO:GO:0005744 GO:GO:0015450
TIGRFAMs:TIGR00983 GeneTree:ENSGT00390000001094 OMA:KSTGGVR
EMBL:AADN02043529 IPI:IPI00813364 Ensembl:ENSGALT00000003257
NextBio:20826062 Uniprot:E1BR29
Length = 202
Score = 113 (44.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LNL + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 42 SPY--LNLDPK--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGALNGL 95
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GVV R +D
Sbjct: 96 RLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVVIEKTRGAEDD 153
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
+++AAG TG + ++ G+R
Sbjct: 154 LNTIAAGTLTGMLYKSTGGVR 174
>RGD|3863 [details] [associations]
symbol:Timm23 "translocase of inner mitochondrial membrane 23
homolog (yeast)" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=IEA;ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA;IMP] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IPI] [GO:0031305
"integral to mitochondrial inner membrane" evidence=ISO]
InterPro:IPR005681 InterPro:IPR003397 RGD:3863 Pfam:PF02466
GO:GO:0016021 GO:GO:0006886 GO:GO:0005743 GO:GO:0005744 GO:GO:0015450
eggNOG:COG5596 HOGENOM:HOG000166435 TIGRFAMs:TIGR00983
HOVERGEN:HBG057526 CTD:100287932 OrthoDB:EOG4GTKF4 EMBL:AB006451
IPI:IPI00205392 PIR:JE0154 RefSeq:NP_062225.1 UniGene:Rn.154974
UniGene:Rn.2230 STRING:O35093 PRIDE:O35093 GeneID:54312
KEGG:rno:54312 UCSC:RGD:3863 InParanoid:O35093 NextBio:610982
ArrayExpress:O35093 Genevestigator:O35093
GermOnline:ENSRNOG00000019811 GermOnline:ENSRNOG00000032900
Uniprot:O35093
Length = 209
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGALNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQSMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
+++VAAG TG + + G+R
Sbjct: 155 FNTVAAGTMTGMLYKCTGGLR 175
>UNIPROTKB|F1SDW3 [details] [associations]
symbol:TIMM23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005744
"mitochondrial inner membrane presequence translocase complex"
evidence=IEA] InterPro:IPR005681 InterPro:IPR003397 Pfam:PF02466
GO:GO:0006886 GO:GO:0005744 GO:GO:0015450 TIGRFAMs:TIGR00983
CTD:100287932 GeneTree:ENSGT00390000001094 OMA:RFELAFS
EMBL:CU607060 RefSeq:XP_001926590.3 UniGene:Ssc.7629
Ensembl:ENSSSCT00000023429 GeneID:100157391 KEGG:ssc:100157391
Uniprot:F1SDW3
Length = 209
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAVNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
++VAAG TG + + G+R
Sbjct: 155 LNTVAAGTMTGMLYKCTGGLR 175
>RGD|1559672 [details] [associations]
symbol:RGD1559672 "similar to Translocase of inner mitochondrial
membrane 23 homolog" species:10116 "Rattus norvegicus" [GO:0005744
"mitochondrial inner membrane presequence translocase complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR005681
InterPro:IPR003397 RGD:1559672 Pfam:PF02466 GO:GO:0016021
GO:GO:0006886 GO:GO:0005744 GO:GO:0015450 TIGRFAMs:TIGR00983
GeneTree:ENSGT00390000001094 OrthoDB:EOG4GTKF4 OMA:KSTGGVR
IPI:IPI00212267 RefSeq:XP_003750205.1 RefSeq:XP_003754220.1
Ensembl:ENSRNOT00000048004 GeneID:500650 KEGG:rno:500650
UCSC:RGD:1559672 CTD:500650 NextBio:706864 Uniprot:D4ACB3
Length = 209
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGALNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQSMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
++VAAG TG + + G+R
Sbjct: 155 LNTVAAGTMTGMLYKCTGGLR 175
>UNIPROTKB|Q5XIW0 [details] [associations]
symbol:Timm23 "RCG62963" species:10116 "Rattus norvegicus"
[GO:0005744 "mitochondrial inner membrane presequence translocase
complex" evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005681
InterPro:IPR003397 RGD:3863 Pfam:PF02466 GO:GO:0016021
GO:GO:0006886 GO:GO:0005744 EMBL:CH474046 EMBL:CH473949
GO:GO:0015450 eggNOG:COG5596 TIGRFAMs:TIGR00983 HOVERGEN:HBG057526
GeneTree:ENSGT00390000001094 OMA:RFELAFS UniGene:Rn.154974
UniGene:Rn.2230 EMBL:BC083559 IPI:IPI00959734 RefSeq:XP_002729245.1
RefSeq:XP_003753798.1 STRING:Q5XIW0 Ensembl:ENSRNOT00000026932
GeneID:100362432 KEGG:rno:100362432 InParanoid:Q5XIW0
Genevestigator:Q5XIW0 Uniprot:Q5XIW0
Length = 209
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGALNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQSMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
++VAAG TG + + G+R
Sbjct: 155 LNTVAAGTMTGMLYKCTGGLR 175
>ZFIN|ZDB-GENE-020419-17 [details] [associations]
symbol:timm23 "translocase of inner mitochondrial
membrane 23 homolog (yeast)" species:7955 "Danio rerio" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005681 InterPro:IPR003397 Pfam:PF02466
ZFIN:ZDB-GENE-020419-17 GO:GO:0016021 GO:GO:0007275 GO:GO:0005744
GO:GO:0045039 GO:GO:0015450 eggNOG:COG5596 HOGENOM:HOG000166435
TIGRFAMs:TIGR00983 HOVERGEN:HBG057526 GO:GO:0042719
OrthoDB:EOG4GTKF4 EMBL:AF506231 EMBL:BC053170 IPI:IPI00508830
UniGene:Dr.80644 STRING:Q7T2P6 InParanoid:Q7T2P6
ArrayExpress:Q7T2P6 Uniprot:Q7T2P6
Length = 208
Score = 109 (43.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ G GL
Sbjct: 43 SPY--LNVDPR--YLIQDTDEFILPTGANKTRGRF--ELAFFTIGGCCITGAAFGTLNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWS 139
K + ++LN G SW N +G + L+Y+ + A +D +
Sbjct: 97 RMGLSETRDMPWSKPRNVQILNMVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDDLN 156
Query: 140 SVAAGLGTGAVCRAARGIR 158
+VAAG TG V ++ G++
Sbjct: 157 TVAAGTLTGMVFKSTGGLK 175
>UNIPROTKB|A4IFL0 [details] [associations]
symbol:TIMM23 "Mitochondrial import inner membrane
translocase subunit Tim23" species:9913 "Bos taurus" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=IEA] InterPro:IPR005681
InterPro:IPR003397 Pfam:PF02466 GO:GO:0016021 GO:GO:0006886
GO:GO:0005744 GO:GO:0015450 eggNOG:COG5596 HOGENOM:HOG000166435
TIGRFAMs:TIGR00983 HOVERGEN:HBG057526 EMBL:BC134628 IPI:IPI00712194
RefSeq:NP_001077127.1 UniGene:Bt.20686 STRING:A4IFL0 PRIDE:A4IFL0
Ensembl:ENSBTAT00000015525 GeneID:509841 KEGG:bta:509841
CTD:100287932 GeneTree:ENSGT00390000001094 InParanoid:A4IFL0
OMA:RFELAFS OrthoDB:EOG4GTKF4 NextBio:20869159 Uniprot:A4IFL0
Length = 209
Score = 109 (43.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAMNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
++VAAG TG + + G+R
Sbjct: 155 LNTVAAGTMTGMLYKCTGGLR 175
>UNIPROTKB|O14925 [details] [associations]
symbol:TIMM23 "Mitochondrial import inner membrane
translocase subunit Tim23" species:9606 "Homo sapiens" [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005758 "mitochondrial intermembrane space" evidence=IDA]
[GO:0006626 "protein targeting to mitochondrion" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005743 "mitochondrial inner membrane" evidence=TAS]
[GO:0031305 "integral to mitochondrial inner membrane"
evidence=IDA] [GO:0005744 "mitochondrial inner membrane presequence
translocase complex" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR005681
InterPro:IPR003397 Pfam:PF02466 GO:GO:0006626 GO:GO:0005758
GO:GO:0005744 GO:GO:0044267 GO:GO:0031305 EMBL:AL450342
GO:GO:0015450 eggNOG:COG5596 HOGENOM:HOG000166435
TIGRFAMs:TIGR00983 UniGene:Hs.499594 HOVERGEN:HBG057526
CTD:100287932 OMA:RFELAFS OrthoDB:EOG4GTKF4 EMBL:AF030162
EMBL:AY442341 EMBL:AK223331 EMBL:BC062707 EMBL:BC066951
IPI:IPI00007309 RefSeq:NP_006318.1 UniGene:Hs.524308
UniGene:Hs.661964 ProteinModelPortal:O14925 IntAct:O14925
STRING:O14925 PhosphoSite:O14925 PaxDb:O14925 PRIDE:O14925
Ensembl:ENST00000260867 GeneID:100287932 KEGG:hsa:100287932
UCSC:uc001jin.3 GeneCards:GC10M051591 HGNC:HGNC:17312 HPA:HPA031408
HPA:HPA047180 MIM:605034 neXtProt:NX_O14925 PharmGKB:PA38227
InParanoid:O14925 GenomeRNAi:100287932 NextBio:20777681
ArrayExpress:O14925 Bgee:O14925 CleanEx:HS_TIMM23
Genevestigator:O14925 GermOnline:ENSG00000138297 Uniprot:O14925
Length = 209
Score = 109 (43.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAMNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTGAVCRAARGIR 158
++VAAG TG + + G+R
Sbjct: 155 LNTVAAGTMTGMLYKCTGGLR 175
>UNIPROTKB|J9NUG0 [details] [associations]
symbol:TIMM23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0005744 "mitochondrial inner
membrane presequence translocase complex" evidence=IEA]
InterPro:IPR005681 InterPro:IPR003397 Pfam:PF02466 GO:GO:0016021
GO:GO:0006886 GO:GO:0005744 GO:GO:0015450 TIGRFAMs:TIGR00983
GeneTree:ENSGT00390000001094 EMBL:AAEX03015370
Ensembl:ENSCAFT00000045459 OMA:KSTGGVR Uniprot:J9NUG0
Length = 175
Score = 100 (40.3 bits), Expect = 0.00063, P = 0.00063
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 21 NPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGL 79
+PY LN+ + Y + EF+ + R + L F+T G + G+ GA GL
Sbjct: 43 SPY--LNVDPR--YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAMNGL 96
Query: 80 FSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDV 137
K + K + ++LN G W N +G + L+Y+ GV+ R +D
Sbjct: 97 RLGLKETQNMSWSKPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDD 154
Query: 138 WSSVAAGLGTG 148
++VAAG TG
Sbjct: 155 LNTVAAGTMTG 165
>WB|WBGene00008164 [details] [associations]
symbol:C47G2.3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR003397 Pfam:PF02466
GO:GO:0016021 GO:GO:0009792 GO:GO:0006915 GO:GO:0005743
GO:GO:0015031 GO:GO:0000003 EMBL:Z49125 eggNOG:COG5596
GeneTree:ENSGT00390000016067 HOGENOM:HOG000161169 OMA:FESCAFK
RefSeq:NP_496412.1 ProteinModelPortal:Q9NAQ9 STRING:Q9NAQ9
PaxDb:Q9NAQ9 EnsemblMetazoa:C47G2.3.1 EnsemblMetazoa:C47G2.3.2
GeneID:174722 KEGG:cel:CELE_C47G2.3 UCSC:C47G2.3.1 CTD:174722
WormBase:C47G2.3 InParanoid:Q9NAQ9 NextBio:885212 Uniprot:Q9NAQ9
Length = 213
Score = 102 (41.0 bits), Expect = 0.00066, P = 0.00066
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 16 ETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWG-ENLTFYTGTAYLAGSVSG 74
+TR +NP P Q L T PE E I WG EN T + + G G
Sbjct: 51 KTRPWNPERTPIKPIQML----TLPEMSREERWIQ----WGMENCTVKASISGVLGVGVG 102
Query: 75 AAIGLFSAFK----SMEKGD-TLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVV 129
A GLF+A SM GD T +L + + +S+G G IGL+++G E +
Sbjct: 103 FAFGLFTASVDPQLSMVGGDPTKQLTLKQTWKEMSSRMKSYGKNFGSIGLMFSGTECALE 162
Query: 130 AATDRDDVWSSVAAGLGTGAVCRAARGIRS 159
+ D W + G +G + G+R+
Sbjct: 163 TIRAKSD-WRN---GTYSGGIVGGLLGLRA 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 165 0.00093 107 3 11 22 0.41 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 588 (63 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.37u 0.11s 15.48t Elapsed: 00:00:01
Total cpu time: 15.38u 0.11s 15.49t Elapsed: 00:00:01
Start: Sat May 11 05:51:29 2013 End: Sat May 11 05:51:30 2013