BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044037
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38820|TI232_ARATH Mitochondrial import inner membrane translocase subunit TIM23-2
OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1
Length = 188
Score = 256 bits (653), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 157/182 (86%), Gaps = 3/182 (1%)
Query: 9 SDHERDPETRLYNPYAELNLP---AQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGT 65
SDH D TRLYNPY +P +Q LYKLPT+PEFLF+EE++ QRRSWGENLTFYTGT
Sbjct: 7 SDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGT 66
Query: 66 AYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGME 125
AYL GSV+GA++G+ + KS E GDT KLKINR+LNSSG +GR+WGNR+G+IGL+YAG+E
Sbjct: 67 AYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIE 126
Query: 126 SGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVAAKQAVKRYV 185
SG+VAATDRDDVW+SV AGLGTGAVCRAARG+RSAAVAGA+GGLAAGA VA KQ VKRYV
Sbjct: 127 SGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYV 186
Query: 186 PI 187
PI
Sbjct: 187 PI 188
>sp|Q9LNQ1|TI231_ARATH Mitochondrial import inner membrane translocase subunit TIM23-1
OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1
Length = 187
Score = 252 bits (643), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/181 (73%), Positives = 152/181 (83%), Gaps = 2/181 (1%)
Query: 9 SDHERDPETRLYNPYAELNLP--AQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTA 66
SDHE D TRLY+PY +P +Q LYKLPT+PEFLF+EES+ QRRSWGENLTFYTGT
Sbjct: 7 SDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTG 66
Query: 67 YLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMES 126
YLAGSV+GA+ G+FS KS E GDT KLKINR+LNSSG +GR+WGNRVG++GLIYAG+ES
Sbjct: 67 YLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIES 126
Query: 127 GVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVAAKQAVKRYVP 186
GVVA TD+DDVW+SV AGLGTGAV RAARG+RSAAVAGA GG+AAGA VA KQ KRY
Sbjct: 127 GVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYAH 186
Query: 187 I 187
I
Sbjct: 187 I 187
>sp|Q9S837|TI233_ARATH Mitochondrial import inner membrane translocase subunit TIM23-3
OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1
Length = 188
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 11 HERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYLAG 70
H++ + R YNPY ++NLP + LY+LPT+PEFLF EE+ +R +WGENLTF+TG Y G
Sbjct: 11 HQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTG 70
Query: 71 SVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVA 130
SV GA G + ++ E+G++LK++ NR+LNS G R GN +G +GL++A MESGV
Sbjct: 71 SVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTY 130
Query: 131 ATDRDD-VWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVAAKQAVKRYVPI 187
D DD ++V AGL TG + RAA G RSA VAGA+GG+AA AAVA ++ VKR+VPI
Sbjct: 131 MRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKRFVPI 188
>sp|Q9USM7|TIM23_SCHPO Mitochondrial import inner membrane translocase subunit tim23
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim23 PE=3 SV=1
Length = 210
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 9 SDHERDPETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWGENLTFYTGTAYL 68
S E DP +P A+L+ P L L + R W ++L + TGT+YL
Sbjct: 35 SGSEFDPAK--LHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYL 92
Query: 69 AGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGV 128
+G G GL K + + +L++N +LN G GN +GV+ L+Y G+ S +
Sbjct: 93 SGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLI 152
Query: 129 VAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVAAKQAVKR 183
+ +SVAAG TGA+ ++ RG+R+ A++ ++ AAG AK++ +
Sbjct: 153 GYKRQKHGWENSVAAGALTGALYKSTRGLRAMAISSSLVATAAGIWTLAKRSFTK 207
>sp|P32897|TIM23_YEAST Mitochondrial import inner membrane translocase subunit TIM23
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM23 PE=1 SV=1
Length = 222
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 53 RSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGN 112
R W ++L + TG YL G G G+ +++ KL++N VLN G GN
Sbjct: 91 RGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGN 150
Query: 113 RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLAAG 172
G++ L Y + S + A + D S+ AG TGA+ ++++G++ + A+
Sbjct: 151 NAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSSAM----VA 206
Query: 173 AAVAAKQAVKR 183
AA A +VK+
Sbjct: 207 AACAVWCSVKK 217
>sp|Q5XH94|TIM23_XENTR Mitochondrial import inner membrane translocase subunit Tim23
OS=Xenopus tropicalis GN=timm23 PE=2 SV=1
Length = 209
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + N EF+ + R + L F+T G ++G+ GA GL FK +
Sbjct: 52 YLVQDNDEFILPTGANKTRGRF--ELAFFTIGGCCMSGAAFGAVNGLRLGFKETQNMAWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAV 150
K K ++LN G W N +G + L+Y+ GV+ R +D +++AAG TG +
Sbjct: 110 KPKNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDDLNTIAAGTMTGML 167
Query: 151 CRAARGIRSAAVAGAIGGLAAGAAVA 176
++ G+R A G + GLA +A A
Sbjct: 168 YKSTGGLRGVA-RGGLAGLALTSAFA 192
>sp|Q6INU6|TIM23_XENLA Mitochondrial import inner membrane translocase subunit Tim23
OS=Xenopus laevis GN=timm23 PE=2 SV=1
Length = 209
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 33 LYKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDT 91
+Y + EF+ + R + L F+T G ++G+ GA GL FK +
Sbjct: 51 MYLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCISGAAFGALNGLKLGFKETQNMPW 108
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGA 149
K K ++LN G W N +G + L+Y+ GV+ R +D +++AAG TG
Sbjct: 109 SKPKNVQILNMVTRQGALWANTLGSLALLYSAF--GVIVEKTRGAEDDLNTIAAGTMTGM 166
Query: 150 VCRAARGIRSAAVAGAIGGLAAGAAVA 176
+ ++ G+R A G + GLA + A
Sbjct: 167 LYKSTGGLRGVA-RGGLAGLALASTFA 192
>sp|Q7T2P6|TIM23_DANRE Mitochondrial import inner membrane translocase subunit Tim23
OS=Danio rerio GN=timm23 PE=2 SV=1
Length = 208
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + EF+ + R + L F+T G + G+ G GL
Sbjct: 52 YLIQDTDEFILPTGANKTRGRF--ELAFFTIGGCCITGAAFGTLNGLRMGLSETRDMPWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCR 152
K + ++LN G SW N +G + L+Y+ + A +D ++VAAG TG V +
Sbjct: 110 KPRNVQILNMVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDDLNTVAAGTLTGMVFK 169
Query: 153 AARGIRSAAVAGAIG 167
+ G++ A G IG
Sbjct: 170 STGGLKGVARGGLIG 184
>sp|Q9VGA2|TI17C_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1
Length = 222
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYA 122
G A++ G++ G+ F++ G L+ ++ ++ S V G ++
Sbjct: 16 CGCAFMMGTIGGSLFEFLKGFRNAPTG--LQRRLYGGIDLVKMRTPSIAGSFAVWGATFS 73
Query: 123 GMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLA------AGAAVA 176
++ +V R+D W+S+ +G TG + A GIR+ A + +G L AGAAVA
Sbjct: 74 TVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAGAAVA 133
Query: 177 AKQAVKR 183
A +
Sbjct: 134 TINAADK 140
>sp|O35093|TIM23_RAT Mitochondrial import inner membrane translocase subunit Tim23
OS=Rattus norvegicus GN=Timm23 PE=2 SV=1
Length = 209
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + EF+ + R + L F+T G + G+ GA GL K +
Sbjct: 52 YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGALNGLRLGLKETQSMPWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAV 150
K + ++LN G W N +G + L+Y+ GV+ R +D +++VAAG TG +
Sbjct: 110 KPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDDFNTVAAGTMTGML 167
Query: 151 CRAARGIRSAAVAGAIG 167
+ G+R A G G
Sbjct: 168 YKCTGGLRGIARGGLAG 184
>sp|O14925|TIM23_HUMAN Mitochondrial import inner membrane translocase subunit Tim23
OS=Homo sapiens GN=TIMM23 PE=1 SV=1
Length = 209
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + EF+ + R + L F+T G + G+ GA GL K +
Sbjct: 52 YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAMNGLRLGLKETQNMAWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAV 150
K + ++LN G W N +G + L+Y+ GV+ R +D ++VAAG TG +
Sbjct: 110 KPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDDLNTVAAGTMTGML 167
Query: 151 CRAARGIRSAAVAGAIG 167
+ G+R A G G
Sbjct: 168 YKCTGGLRGIARGGLTG 184
>sp|Q9WTQ8|TIM23_MOUSE Mitochondrial import inner membrane translocase subunit Tim23
OS=Mus musculus GN=Timm23 PE=2 SV=1
Length = 209
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + EF+ + R + L F+T G + G+ GA GL K +
Sbjct: 52 YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTGAAFGAMNGLRLGLKETQSMAWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAV 150
K + ++LN G W N +G + L+Y+ GV+ R +D ++VAAG TG +
Sbjct: 110 KPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDDLNTVAAGTMTGML 167
Query: 151 CRAARGIRSAAVAGAIG 167
+ G+R A G G
Sbjct: 168 YKCTGGLRGIARGGLAG 184
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 37 PTNPEFLFSEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKG----DTL 92
P PE E+ + +R E+ F A + G V G A G+F+A G D L
Sbjct: 43 PIKPE----EQKMMERVM--ESCGFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPL 96
Query: 93 KLKINR-VLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
+ + VL G G S+ ++G +++ E V + + D +SV +G TG
Sbjct: 97 RTPTAKEVLRDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITG--- 153
Query: 152 RAARGIRSAAVAGAI--GGLAAGAAV 175
A G R+ AG + GG AA +AV
Sbjct: 154 -GAIGFRAGLKAGVLGCGGFAAFSAV 178
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 45 SEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKG----DTLKLKINR-V 99
SEE R+ E+ F A + G V G A G+F+A G D + R V
Sbjct: 54 SEEQKMIERAM-ESCAFKAVLACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREV 112
Query: 100 LNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRS 159
L G G S+ ++G +++ E V + + D +SV +G TG A G R+
Sbjct: 113 LKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITG----GAIGFRA 168
Query: 160 AAVAGAIGGLAAGAAVAAKQAVKRYV 185
AGAIG G A A+ Y+
Sbjct: 169 GVKAGAIG---CGGFAAFSAAIDYYL 191
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDT-LKLKINRVLNSSGHSGRSWGNRVGVIGLIY 121
G A+ G++ G G+F AFK + ++ L + G V G ++
Sbjct: 17 CGGAFTMGTIGG---GIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73
Query: 122 AGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARG----IRSAAVAGAIGGLAAGAAV 175
+ ++ G+V ++D W+S+ +G TGA+ A G + SAA+ G + L GA +
Sbjct: 74 STIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGI 131
>sp|Q6CRJ6|TIM22_KLULA Mitochondrial import inner membrane translocase subunit TIM22
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM22
PE=3 SV=1
Length = 196
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
LK +I + G S G IG+IY+G+E V + ++D+++ VAAG TG
Sbjct: 96 LKQQIKIQFSDMGKRSYSSAKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGL 155
Query: 152 RAARGIRSAAVAGAIGGLAA 171
G ++A V A G AA
Sbjct: 156 AYKSGPQAALVGCA--GFAA 173
>sp|Q9NAQ9|TIM22_CAEEL Mitochondrial import inner membrane translocase subunit tim-22
OS=Caenorhabditis elegans GN=tim-22 PE=3 SV=1
Length = 213
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 16 ETRLYNPYAELNLPAQNLYKLPTNPEFLFSEESIHQRRSWG-ENLTFYTGTAYLAGSVSG 74
+TR +NP P Q L T PE E I WG EN T + + G G
Sbjct: 51 KTRPWNPERTPIKPIQML----TLPEMSREERWIQ----WGMENCTVKASISGVLGVGVG 102
Query: 75 AAIGLFSAFK----SMEKGD-TLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVV 129
A GLF+A SM GD T +L + + +S+G G IGL+++G E +
Sbjct: 103 FAFGLFTASVDPQLSMVGGDPTKQLTLKQTWKEMSSRMKSYGKNFGSIGLMFSGTECALE 162
Query: 130 AATDRDD 136
+ D
Sbjct: 163 TIRAKSD 169
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 40 PEFLFSEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKG----DTLKLK 95
P + SEE R E+ F A + G V G A G+F+A G D +
Sbjct: 43 PTPIKSEEQKMMERVM-ESCGFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTP 101
Query: 96 INR-VLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAA 154
+ VL G G S+ ++G +++ E V + + D +SV +G TG A
Sbjct: 102 TAKEVLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITG----GA 157
Query: 155 RGIRSAAVAGAI--GGLAAGAAV 175
G R+ AGA+ GG AA +AV
Sbjct: 158 IGFRAGLKAGALGCGGFAAFSAV 180
>sp|Q5RDD0|TIM23_PONAB Mitochondrial import inner membrane translocase subunit Tim23
OS=Pongo abelii GN=TIMM23 PE=2 SV=1
Length = 209
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 34 YKLPTNPEFLFSEESIHQRRSWGENLTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTL 92
Y + EF+ + R + L F+T G + + GA GL K +
Sbjct: 52 YLVQDTDEFILPTGANKTRGRF--ELAFFTIGGCCMTVAAFGAMNGLRLGLKETQNMAWS 109
Query: 93 KLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAV 150
K + ++LN G W N +G + L+Y+ GV+ R +D ++VAAG TG +
Sbjct: 110 KPRNVQILNMVTRQGALWANTLGSLALLYSAF--GVIIEKTRGAEDDLNTVAAGTMTGML 167
Query: 151 CRAARGIRSAAVAGAIG 167
+ G+R A G G
Sbjct: 168 YKCTGGLRGIARGGLTG 184
>sp|Q54QM0|TIM22_DICDI Mitochondrial import inner membrane translocase subunit tim22
OS=Dictyostelium discoideum GN=timm22 PE=3 SV=1
Length = 179
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 22/162 (13%)
Query: 27 NLPAQNLYKLPTNP--EFLFSEESIHQRRSWGENLTFYTGTAY----------LAGSVSG 74
N+ + L K+ ++ +F+F+E + +N+ Y Y + G V G
Sbjct: 3 NISDEELKKILSDNAHKFMFAENGVRDFLPNIKNIAPYNEMQYNLMDNCIVHGVRGMVMG 62
Query: 75 AAIG-LFSAFKSMEKG--------DTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGME 125
A G LF A + G L ++ G SG + +I L+Y G E
Sbjct: 63 GAFGFLFGALFTPNSGFTPEPTTPTPLYRQVIDGFKEQGRSGLRSAKSLSIITLVYTGTE 122
Query: 126 SGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIG 167
+ A R D + + AG TGAV A R AAV G +G
Sbjct: 123 CAIEKARGRTDKLNPIYAGCTTGAV-FAGRAGPMAAVGGCVG 163
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Query: 45 SEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSAFKSMEKG----DTLKLKINR-V 99
SEE R+ E+ F A + G V G A G+F+A G D + R V
Sbjct: 56 SEEQKMIERAM-ESCAFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREV 114
Query: 100 LNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRS 159
L G G S+ ++G +++ E V + + D +SV +G TG A G R+
Sbjct: 115 LKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITG----GAIGFRA 170
Query: 160 AAVAGAIGGLAAGAAVAAKQAVKRYV 185
AG IG G A A+ Y+
Sbjct: 171 GLKAGVIG---CGGFAAFSAAIDYYL 193
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 37.7 bits (86), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 45 SEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSA-------FKSMEKGDTLKLKIN 97
SEE R+ E+ F A + G V G A G+F+A F + T K
Sbjct: 56 SEEQKMIERAM-ESCAFKAVLACVGGFVLGGAFGIFTAGIDTNVGFDPKDPYRTPTAK-- 112
Query: 98 RVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGI 157
VL G G S+ ++G +++ E V + + D +SV +G TG A G
Sbjct: 113 EVLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITG----GAIGF 168
Query: 158 RSAAVAGAIG 167
R+ AGAIG
Sbjct: 169 RAGVKAGAIG 178
>sp|Q75E80|TIM22_ASHGO Mitochondrial import inner membrane translocase subunit TIM22
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM22 PE=3 SV=1
Length = 201
Score = 37.4 bits (85), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
LK +I G S G IG+IY+G+E + + ++D+++ VAAG TG
Sbjct: 101 LKQQIKIQFADMGRRAYSSAKNFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGL 160
Query: 152 RAARGIRSAAVAGAIGGLAAGAAV 175
G SAA+ G G A A+
Sbjct: 161 AYKSG-PSAALIGCAGFAAFSTAI 183
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDT-LKLKINRVLNSSGHSGRSWGNRVGVIGLIY 121
G A+ G++ G G+F AFK + ++ L + G V G ++
Sbjct: 17 CGGAFTMGTIGG---GIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73
Query: 122 AGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARG----IRSAAVAGAIGGLAAGAAV 175
+ ++ +V ++D W+S+ +G TGA+ A G + SAA+ G + L GA +
Sbjct: 74 STIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGI 131
>sp|P87146|TIM22_SCHPO Mitochondrial import inner membrane translocase subunit tim22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim22 PE=3 SV=1
Length = 175
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 109 SWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGG 168
S G++GLIY+G E + A + D+++++AAG+ TG G ++ + GA G
Sbjct: 102 STAKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAIVLGGAGFG 161
Query: 169 L 169
L
Sbjct: 162 L 162
>sp|Q9VN97|TI17D_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=3 SV=1
Length = 224
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYA 122
G A++ G++ G+ F++ G L+ ++ + S + + G ++
Sbjct: 16 CGCAFMMGTMGGSLFQYLKGFRNAPSG--LRRGLHGGIESVRLRTPAIAGSFAIWGATFS 73
Query: 123 GMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGLA------AGAAVA 176
++ +V+ R+D W+++ +G TG + A GIR+ A + +G L AGAAVA
Sbjct: 74 TVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEGAGAAVA 133
>sp|Q9LN27|TI171_ARATH Mitochondrial import inner membrane translocase subunit TIM17-1
OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1
Length = 218
Score = 36.6 bits (83), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 64 GTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAG 123
G A+ G+V G+A L + G L + + S SG S+ V G +Y+
Sbjct: 20 GGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGPRSGGSFS----VWGGLYST 75
Query: 124 MESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGL 169
+ +V A ++D W+S+ +G TG +G+ ++A + +GG+
Sbjct: 76 FDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGGV 121
>sp|Q12328|TIM22_YEAST Mitochondrial import inner membrane translocase subunit TIM22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM22 PE=1 SV=1
Length = 207
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGA 149
+KL+ + S S +++G IG+IYAG+E + + ++D+++ V AG TGA
Sbjct: 111 MKLQFTDMGKKSYSSAKNFG----YIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGA 164
>sp|Q5SRD1|TI23B_HUMAN Putative mitochondrial import inner membrane translocase subunit
Tim23B OS=Homo sapiens GN=TIMM23B PE=5 SV=2
Length = 257
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 59 LTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVI 117
L F+T G + G+ GA GL K + K + ++LN G W N +G +
Sbjct: 75 LAFFTIGGCCMTGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSL 134
Query: 118 GLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAVCRAA 154
L+Y+ GV+ R +D ++VAAG TG + +
Sbjct: 135 ALLYSAF--GVIIEKTRGAEDDLNTVAAGTMTGMLYKCT 171
>sp|Q6FT37|TIM22_CANGA Mitochondrial import inner membrane translocase subunit TIM22
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM22 PE=3 SV=1
Length = 193
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
L+ ++ G S G IG+IYAG+E V + ++D+++ + AG TG
Sbjct: 93 LRQQVKLQFADMGKRAYSSAKNFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGL 152
Query: 152 RAARGIRSAAVAGAIGGLAAGAAV 175
G + AA+ G G A AA+
Sbjct: 153 AYKSGPQ-AALVGCAGFAAFSAAI 175
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
LK ++ G S +G +++G+E G+ ++D+ + VAAG TGA+
Sbjct: 101 LKEQLKHGFKDMGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAIL 160
Query: 152 RAARGIRSAAVAGAIGGLAAGAAVAA 177
G ++AAV G G A AA+ A
Sbjct: 161 AKNGGPQAAAV-GCAGFAAFSAAIDA 185
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDT-LKLKINRVLNSSGHSGRSWGNRVGVIGLIY 121
G A+ G + G G+F A K ++ ++ +N+ G V G ++
Sbjct: 17 CGGAFTMGVIGG---GVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQIGGSFAVWGGLF 73
Query: 122 AGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGG 168
+ ++ G+V ++D W+S+ +G TGAV AAR + A V A+ G
Sbjct: 74 STIDCGLVRLRGKEDPWNSITSGALTGAVL-AARSVPLAMVGSAMMG 119
>sp|A4IFL0|TIM23_BOVIN Mitochondrial import inner membrane translocase subunit Tim23
OS=Bos taurus GN=TIMM23 PE=2 SV=1
Length = 209
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 59 LTFYT-GTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVI 117
L F+T G + G+ GA GL K + K + ++LN G W N +G +
Sbjct: 75 LAFFTIGGCCMTGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSL 134
Query: 118 GLIYAGMESGVVAATDR--DDVWSSVAAGLGTGAVCRA 153
L+Y+ GV+ R +D ++VAAG TG + +
Sbjct: 135 ALLYSAF--GVIIEKTRGAEDDLNTVAAGTMTGMLYKC 170
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 45 SEESIHQRRSWGENLTFYTGTAYLAGSVSGAAIGLFSA-------FKSMEKGDTLKLKIN 97
SEE ++ E+ F A + G V G A G+F+A F + T K
Sbjct: 56 SEEQKMIEKAM-ESCAFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAK-- 112
Query: 98 RVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGI 157
VL G G S+ ++G +++ E + + D +SV +G TG A G
Sbjct: 113 EVLKDMGQRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITG----GAIGF 168
Query: 158 RSAAVAGAIG 167
R+ AGAIG
Sbjct: 169 RAGLKAGAIG 178
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDT-LKLKINRVLNSSGHSGRSWGNRVGVIGLIY 121
G A+ G++ G G+F A K + ++ L + G V G ++
Sbjct: 17 CGGAFTMGTIGG---GIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLF 73
Query: 122 AGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARG----IRSAAVAGAIGGLAAGAAV 175
+ ++ +V ++D W+S+ +G TGA+ A G + SAA+ G + L GA +
Sbjct: 74 SMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGI 131
>sp|Q6BZY4|TIM22_YARLI Mitochondrial import inner membrane translocase subunit TIM22
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM22 PE=3 SV=2
Length = 185
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 92 LKLKINRVLNSSGHSGRSWGN--RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGA 149
L K + + R+W + G IG +++G E + + ++D+W+ VAAG TG
Sbjct: 83 LPFKQQMKIQFTDMGKRAWSSAKNFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGG 142
Query: 150 VCRAARGIRSAAVAGAIGGLAAGAAV 175
G + AA+ G G A AA+
Sbjct: 143 GLAVKAGPQ-AALVGCAGFAAFSAAI 167
>sp|Q6BT35|TIM22_DEBHA Mitochondrial import inner membrane translocase subunit TIM22
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1
Length = 182
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 92 LKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVC 151
K ++ + G S G IG++Y+G+E + + + D+++ V+AG TG
Sbjct: 82 FKQQMKLQFSDMGKRTYSSAKNFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGG- 140
Query: 152 RAARGIRSAAVAGAIGGLAAGAAV 175
A R AA+ G G A A+
Sbjct: 141 LAIRAGPQAALVGCAGFAAFSTAI 164
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDT-LKLKINRVLNSSGHSGRSWGNRVGVIGLIY 121
G A+ G + G G+F A K ++ + +N+ G V G ++
Sbjct: 17 CGGAFTMGVIGG---GVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQIGGSFAVWGGLF 73
Query: 122 AGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGL 169
+ ++ G+V ++D W+S+++G TGAV A G + + +GG+
Sbjct: 74 STIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGI 121
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 63 TGTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVG----VIG 118
G A+ G + G G+F A K + I L S ++ R ++G V G
Sbjct: 17 CGGAFTMGVIGG---GVFQAIKGFRNA---PVGIRHRLRGSANAVRIRAPQIGGSFAVWG 70
Query: 119 LIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGGL 169
+++ ++ G+V ++D W+S+ +G TGAV A G + + +GG+
Sbjct: 71 GLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGI 121
>sp|P0CR88|TIM22_CRYNJ Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIM22 PE=3 SV=1
Length = 187
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 84 KSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAA 143
++ K T + + V G + S G +G++Y+G+E + ++D+++ V+A
Sbjct: 85 RASNKLTTTRAQTMFVFKEMGRNMWSSGRGFAKVGMVYSGVECCIEGYRAKNDIYNGVSA 144
Query: 144 GLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVA 176
G TGA+ R+A +GG A AA +
Sbjct: 145 GFLTGAILA-----RNAGPTAMLGGGVAFAAFS 172
>sp|P0CR89|TIM22_CRYNB Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIM22 PE=3 SV=1
Length = 187
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 84 KSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAA 143
++ K T + + V G + S G +G++Y+G+E + ++D+++ V+A
Sbjct: 85 RASNKLTTTRAQTMFVFKEMGRNMWSSGRGFAKVGMVYSGVECCIEGYRAKNDIYNGVSA 144
Query: 144 GLGTGAVCRAARGIRSAAVAGAIGGLAAGAAVA 176
G TGA+ R+A +GG A AA +
Sbjct: 145 GFLTGAILA-----RNAGPTAMLGGGVAFAAFS 172
>sp|Q9NPL8|TIDC1_HUMAN Translocase of inner mitochondrial membrane domain-containing
protein 1 OS=Homo sapiens GN=TIMMDC1 PE=1 SV=2
Length = 285
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 107 GRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAI 166
G WG R V I+ + + + ++D + V AG TG++ R G+R G I
Sbjct: 135 GWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGGII 194
Query: 167 GGLAAGAAVAAKQAVKRY 184
G L A ++Y
Sbjct: 195 GALLGTPVGGLLMAFQKY 212
>sp|P81928|140U_DROME RPII140-upstream gene protein OS=Drosophila melanogaster GN=140up
PE=2 SV=2
Length = 261
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 107 GRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIR 158
G WG RVG+ Y G+ + + + ++ +AAG TG++ + + G+R
Sbjct: 128 GFKWGWRVGLFTTSYFGIITCMSVYRGKSSIYEYLAAGSITGSLYKVSLGLR 179
>sp|Q5XK94|TIDC1_XENLA Translocase of inner mitochondrial membrane domain-containing
protein 1 OS=Xenopus laevis GN=timmdc1 PE=2 SV=1
Length = 256
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 107 GRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCR---AARGIRSAAVA 163
G WG RV I+ + +G+ D+ + AAG TG + R G+ S ++
Sbjct: 108 GWRWGWRVAAFVTIFNSVSTGLTVYRDKLALSHYAAAGAVTGGLFRLNLGLVGLLSGSLI 167
Query: 164 GAIGGLAAGAAVAAKQAV 181
GA G+ AGA ++ Q++
Sbjct: 168 GAALGVPAGALISGLQSI 185
>sp|A2RVP7|TI221_ARATH Mitochondrial import inner membrane translocase subunit TIM22-1
OS=Arabidopsis thaliana GN=TIM22-1 PE=2 SV=1
Length = 173
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 90 DTLKLKINRVLNSSGHSGRSWGN--RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGT 147
DT+ + V + RSW + V+GL+++ E V A + D ++ AG T
Sbjct: 79 DTMTARQQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVT 138
Query: 148 GAVCRAARGIRSAAVAGAIG 167
G +ARG AA G G
Sbjct: 139 GGS-MSARGGPKAACIGCAG 157
>sp|Q2UMC1|P20D2_ASPOR Probable carboxypeptidase AO090003000058 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=AO090003000058 PE=3 SV=1
Length = 430
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 106 SGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSA 160
S +GN IG + AG+ + VV AT R DV +AAG A R +R A
Sbjct: 279 SSPKYGNTTVNIGRVDAGVAANVVPATARADVAVRLAAGTPDEARDIVRRAVRDA 333
>sp|B8N4P0|P20D2_ASPFN Probable carboxypeptidase AFLA_037450 OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=AFLA_037450 PE=3 SV=1
Length = 430
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 106 SGRSWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSA 160
S +GN IG + AG+ + VV AT R DV +AAG A R +R A
Sbjct: 279 SSPKYGNTTVNIGRVDAGVAANVVPATARADVAVRLAAGTPDEARDIVRRAVRDA 333
>sp|A1XJK0|TI224_ARATH Mitochondrial import inner membrane translocase subunit TIM22-4
OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3
Length = 142
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 90 DTLKLKINRVLNSSGHSGRSWGN--RVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGT 147
DT+ + V + RSW + V+GL+++ E V A + D ++ AG T
Sbjct: 48 DTMTARQQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVT 107
Query: 148 GAVCRAARGIRSAAVAGAIG 167
G +ARG AA G G
Sbjct: 108 GGS-MSARGGPKAACIGCAG 126
>sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2
OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2
Length = 243
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 64 GTAYLAGSVSGAAIGLFSAFKSMEKGDTLKLKINRVLNSSGHSGRSWGNRVGVIGLIYAG 123
G A+ G+V G+A + KG V ++ +G S+ V G +++
Sbjct: 20 GGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFA----VWGGLFST 75
Query: 124 MESGVVAATDRDDVWSSVAAGLGTGAVCRAARGI----RSAAVAGAIGGLAAGAAVAAKQ 179
+ +V ++D W+S+ AG TG +G RSA G + L GA + +
Sbjct: 76 FDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLALIEGAGIMLNK 135
Query: 180 AVKR 183
+ +
Sbjct: 136 VLAQ 139
>sp|Q54K35|TIM17_DICDI Mitochondrial import inner membrane translocase subunit tim17
OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1
Length = 183
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 109 SWGNRVGVIGLIYAGMESGVVAATDRDDVWSSVAAGLGTGAVCRAARGIRSAAVAGAIGG 168
+G + G +++G + + +D + +AAG TG + A G + + A A GG
Sbjct: 55 KFGGNFAIWGSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQAAAFGG 114
Query: 169 LAAGAAVAAKQAVKR 183
+ G A + +++
Sbjct: 115 IFIGIIEAFQHMMQK 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,448,466
Number of Sequences: 539616
Number of extensions: 2929764
Number of successful extensions: 11724
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 9692
Number of HSP's gapped (non-prelim): 1176
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)