Query 044037
Match_columns 187
No_of_seqs 167 out of 606
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 18:54:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044037.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044037hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3bpya1 a.4.5.14 (A:93-177) Af 14.8 1.4E+02 0.0099 18.9 4.8 25 117-141 28-58 (85)
2 g1mhm.1 d.156.1.1 (B:,A:) S-ad 12.2 13 0.00093 30.1 -1.5 32 41-72 105-145 (323)
3 d1jl0a_ d.156.1.1 (A:) S-adeno 11.2 16 0.0012 29.5 -1.1 40 41-80 112-156 (325)
4 d1u7ga_ f.44.1.1 (A:) Ammonium 11.0 2.9E+02 0.021 21.8 6.9 15 133-147 252-269 (383)
5 d1okca_ f.42.1.1 (A:) ADP,ATP 10.5 2.7E+02 0.02 19.6 8.6 19 66-84 5-23 (292)
6 d1yova1 c.111.1.2 (A:6-534) Am 9.7 94 0.0068 25.9 3.3 25 161-187 487-511 (529)
7 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 8.8 80 0.0059 19.6 1.9 22 120-141 22-44 (75)
8 d2imja1 d.17.4.23 (A:5-159) Hy 8.3 29 0.0021 25.0 -0.6 17 124-140 12-28 (155)
9 d3bz6a1 a.4.5.75 (A:13-96) Hyp 5.4 1.7E+02 0.012 18.7 2.2 22 124-145 15-40 (84)
10 d1jb0l_ f.31.1.1 (L:) Photosys 5.0 50 0.0036 23.6 -0.8 26 49-79 108-133 (151)
No 1
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.83 E-value=1.4e+02 Score=18.87 Aligned_cols=25 Identities=24% Similarity=0.209 Sum_probs=18.8
Q ss_pred HHHHHHhhhhhHhhhccCC------chhHHH
Q 044037 117 IGLIYAGMESGVVAATDRD------DVWSSV 141 (187)
Q Consensus 117 ig~lysg~e~~i~~~R~k~------D~~Nsv 141 (187)
+.-+|..++.-..++|.+. +|.|+|
T Consensus 28 L~eIY~~i~~~fPyyr~~~~~~~~~gWkNSI 58 (85)
T d3bpya1 28 LAQIYEWMVRTVPYFKDKGDSNSSAGWKNSI 58 (85)
T ss_dssp HHHHHHHHHHHCGGGTTCTTCCTTSHHHHHH
T ss_pred HHHHHHHHHHhChhhhccCcccccccchhhH
Confidence 3448888888888888654 488887
No 2
>g1mhm.1 d.156.1.1 (B:,A:) S-adenosylmethionine decarboxylase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=12.19 E-value=13 Score=30.13 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=15.3
Q ss_pred cccchhhhhhhcCcccchhhhh---------hhhhhHhhhh
Q 044037 41 EFLFSEESIHQRRSWGENLTFY---------TGTAYLAGSV 72 (187)
Q Consensus 41 E~l~~ee~~~~~r~~~e~l~~~---------tG~~y~~G~~ 72 (187)
.|+||+.+..+-++|.|+..+- .|.+|++|-.
T Consensus 105 nf~fP~~Q~~pH~sf~eEv~~L~~~f~~~~~~g~ay~~G~~ 145 (323)
T g1mhm.1 105 SFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSP 145 (323)
T ss_dssp C-----------CCHHHHHHHHHHHHTTSTTCEEEEEESSS
T ss_pred CCCCccccCCcccCHHHHHHHHHHHhccccCCceeEEeCCC
Confidence 5788887766778899987661 2788988844
No 3
>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.19 E-value=16 Score=29.47 Aligned_cols=40 Identities=20% Similarity=0.403 Sum_probs=28.6
Q ss_pred cccchhhhhhhcCcccchhhh-----hhhhhhHhhhhHHHHHHHH
Q 044037 41 EFLFSEESIHQRRSWGENLTF-----YTGTAYLAGSVSGAAIGLF 80 (187)
Q Consensus 41 E~l~~ee~~~~~r~~~e~l~~-----~tG~~y~~G~~~G~~~G~~ 80 (187)
.|+||+.+..+-++|.|+..+ ..|.+|++|-.=|--|.++
T Consensus 112 nf~fP~~Q~~pH~sf~~Ev~~L~~~f~~G~aY~~G~~~~~hw~ly 156 (325)
T d1jl0a_ 112 NFMKPSHQGYPHRNFQEEIEFLNAIFPNGAGYCMGRMNSDCWYLY 156 (325)
T ss_dssp CCSSGGGCCTTCSSHHHHHHHHHTTCSSEEEEEESCTTSSCEEEE
T ss_pred cCcCcccCCcccCCHHHHHHHHHHhCCCCceEEecCCCCCeEEEE
Confidence 477888776667899998765 2699999996655444443
No 4
>d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]}
Probab=11.04 E-value=2.9e+02 Score=21.77 Aligned_cols=15 Identities=27% Similarity=0.202 Sum_probs=9.1
Q ss_pred cCCch---hHHHHHHHHH
Q 044037 133 DRDDV---WSSVAAGLGT 147 (187)
Q Consensus 133 ~k~D~---~Nsv~AG~~T 147 (187)
+|-|. .|.++||.++
T Consensus 252 ~k~~~~~~~nG~LaGLVa 269 (383)
T d1u7ga_ 252 GLPSLLGACSGAIAGLVG 269 (383)
T ss_dssp SSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhhhhhhh
Confidence 45554 4777777664
No 5
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]}
Probab=10.50 E-value=2.7e+02 Score=19.64 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=9.8
Q ss_pred hhHhhhhHHHHHHHHHHhh
Q 044037 66 AYLAGSVSGAAIGLFSAFK 84 (187)
Q Consensus 66 ~y~~G~~~G~~~G~~~g~~ 84 (187)
+|+-.++.|++-|++....
T Consensus 5 ~~~~~~laG~~a~~i~~~~ 23 (292)
T d1okca_ 5 SFLKDFLAGGVAAAISKTA 23 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555444
No 6
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.69 E-value=94 Score=25.88 Aligned_cols=25 Identities=32% Similarity=0.444 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 044037 161 AVAGAIGGLAAGAAVAAKQAVKRYVPI 187 (187)
Q Consensus 161 ~ig~a~G~~la~a~~~~~~~~~r~~~~ 187 (187)
.+++.+||++ +=+++|-+-++|+||
T Consensus 487 ~vaA~~GGia--aQEviK~iT~qy~Pi 511 (529)
T d1yova1 487 TIAAFLGGAA--AQEVIKIITKQFVIF 511 (529)
T ss_dssp HHHHHHHHHH--HHHHHHHHHTCSBCC
T ss_pred HHHHHHHHHH--HHHHHHHHhcCeecc
Confidence 4567777764 789999999999997
No 7
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.76 E-value=80 Score=19.55 Aligned_cols=22 Identities=14% Similarity=-0.105 Sum_probs=15.8
Q ss_pred HHHhhhhhHhhhcc-CCchhHHH
Q 044037 120 IYAGMESGVVAATD-RDDVWSSV 141 (187)
Q Consensus 120 lysg~e~~i~~~R~-k~D~~Nsv 141 (187)
+|..++.-...+|. .++|.|+|
T Consensus 22 Iy~~i~~~fpy~r~~~~gWkNSI 44 (75)
T d1kq8a_ 22 INEYLMGKFPFFRGSYTGWRNSV 44 (75)
T ss_dssp HHHHHHHHCTTGGGTCSCCHHHH
T ss_pred HHHHHHHhCcccccCCccchhHh
Confidence 66667777777774 46688887
No 8
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=8.27 E-value=29 Score=24.97 Aligned_cols=17 Identities=29% Similarity=0.417 Sum_probs=15.0
Q ss_pred hhhhHhhhccCCchhHH
Q 044037 124 MESGVVAATDRDDVWSS 140 (187)
Q Consensus 124 ~e~~i~~~R~k~D~~Ns 140 (187)
.|.++.++|..+|.||+
T Consensus 12 ~etA~~KVr~AEdaWNs 28 (155)
T d2imja1 12 RESAIEKIRLAEDGWNS 28 (155)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 47889999999999997
No 9
>d3bz6a1 a.4.5.75 (A:13-96) Hypothetical protein PSPTO2686 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=5.45 E-value=1.7e+02 Score=18.66 Aligned_cols=22 Identities=0% Similarity=0.042 Sum_probs=17.7
Q ss_pred hhhhHhhhccCCch----hHHHHHHH
Q 044037 124 MESGVVAATDRDDV----WSSVAAGL 145 (187)
Q Consensus 124 ~e~~i~~~R~k~D~----~Nsv~AG~ 145 (187)
+.|.||+-+-.-|. .|++..||
T Consensus 15 lG~LiEK~~TTPd~YPLsLNaL~~aC 40 (84)
T d3bz6a1 15 LGCLIEKQATNPETYPLTLNALVIAC 40 (84)
T ss_dssp HHHHHHHHHHCGGGCSEEHHHHHHHH
T ss_pred HHhhheecccCCCcCcchHHHHHHHH
Confidence 46889999888885 68888876
No 10
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=5.00 E-value=50 Score=23.61 Aligned_cols=26 Identities=12% Similarity=0.528 Sum_probs=14.0
Q ss_pred hhhcCcccchhhhhhhhhhHhhhhHHHHHHH
Q 044037 49 IHQRRSWGENLTFYTGTAYLAGSVSGAAIGL 79 (187)
Q Consensus 49 ~~~~r~~~e~l~~~tG~~y~~G~~~G~~~G~ 79 (187)
+..+..|.| -..+|.+|...|+++..
T Consensus 108 l~t~~gWs~-----F~~GF~~Gg~GGa~fAy 133 (151)
T d1jb0l_ 108 LKTSEGWSQ-----FTAGFFVGAMGSAFVAF 133 (151)
T ss_dssp GGSHHHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred ccCcccHHH-----hhchhhhccccHHHHHH
Confidence 455666754 23445555555555543
Done!