Query 044042
Match_columns 560
No_of_seqs 373 out of 1758
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 18:59:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 1E-96 4E-101 761.9 30.3 314 243-559 2-316 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 2.9E-96 1E-100 759.2 31.5 314 242-558 5-319 (319)
3 3uw0_A Pectinesterase; right-h 100.0 1.6E-80 5.4E-85 650.7 28.5 287 243-549 30-364 (364)
4 2nsp_A Pectinesterase A; micha 100.0 1.6E-80 5.3E-85 647.8 27.7 288 243-549 3-340 (342)
5 3grh_A YBHC, acyl-COA thioeste 100.0 6.3E-76 2.1E-80 618.5 24.9 264 242-515 73-416 (422)
6 1x91_A Invertase/pectin methyl 100.0 3.1E-28 1E-32 225.6 14.5 144 28-184 7-150 (153)
7 1xg2_B Pectinesterase inhibito 100.0 3.6E-28 1.2E-32 224.7 12.7 143 28-183 5-149 (153)
8 2cj4_A Invertase inhibitor; pr 99.9 4E-27 1.4E-31 217.5 12.9 141 28-184 6-149 (150)
9 1ru4_A Pectate lyase, PEL9A; p 99.6 8.5E-15 2.9E-19 155.7 19.4 142 242-399 13-177 (400)
10 1dbg_A Chondroitinase B; beta 99.4 3.8E-13 1.3E-17 146.5 13.9 147 245-415 25-208 (506)
11 2inu_A Insulin fructotransfera 98.7 8.1E-08 2.8E-12 100.8 11.7 136 277-415 58-228 (410)
12 2pyg_A Poly(beta-D-mannuronate 98.3 1E-05 3.5E-10 84.6 16.3 148 255-414 18-216 (377)
13 3eqn_A Glucan 1,3-beta-glucosi 98.0 0.00026 8.8E-09 79.5 20.4 139 257-405 67-233 (758)
14 1bhe_A PEHA, polygalacturonase 97.6 0.0023 7.8E-08 67.1 18.4 110 327-450 152-276 (376)
15 3gq8_A Preneck appendage prote 97.5 0.005 1.7E-07 68.0 20.1 171 257-447 40-272 (609)
16 1pxz_A Major pollen allergen J 97.4 0.0017 5.8E-08 67.5 13.5 100 257-379 56-176 (346)
17 1hg8_A Endopolygalacturonase; 97.4 0.0027 9.1E-08 66.0 15.0 201 255-482 7-266 (349)
18 2iq7_A Endopolygalacturonase; 97.3 0.0024 8.3E-08 66.0 14.2 200 256-482 8-254 (339)
19 3gqn_A Preneck appendage prote 97.2 0.01 3.5E-07 66.8 18.8 144 257-413 40-244 (772)
20 1rmg_A Rgase A, rhamnogalactur 97.2 0.0073 2.5E-07 64.3 16.3 143 257-413 38-217 (422)
21 1nhc_A Polygalacturonase I; be 97.2 0.0032 1.1E-07 65.1 13.1 201 256-483 8-254 (336)
22 1czf_A Polygalacturonase II; b 97.1 0.0042 1.4E-07 64.9 13.8 200 256-482 35-279 (362)
23 1ia5_A Polygalacturonase; glyc 97.1 0.0036 1.2E-07 64.8 13.1 201 256-482 12-258 (339)
24 1h80_A IOTA-carrageenase; hydr 97.1 0.019 6.6E-07 61.8 18.3 178 256-450 39-272 (464)
25 2uvf_A Exopolygalacturonase; G 97.0 0.0067 2.3E-07 67.6 15.0 109 329-450 334-462 (608)
26 3jur_A EXO-poly-alpha-D-galact 97.0 0.0071 2.4E-07 64.9 14.6 143 328-485 192-353 (448)
27 1qcx_A Pectin lyase B; beta-he 97.0 0.0058 2E-07 63.7 13.5 69 328-397 125-201 (359)
28 2qy1_A Pectate lyase II; GAG l 96.8 0.0072 2.4E-07 62.3 11.4 129 257-414 24-173 (330)
29 1idk_A Pectin lyase A; signal, 96.7 0.0069 2.4E-07 63.1 11.2 89 290-396 104-200 (359)
30 1air_A Pectate lyase C, PELC; 96.7 0.022 7.7E-07 59.1 14.7 136 256-414 26-187 (353)
31 3vmv_A Pectate lyase; polysacc 96.7 0.028 9.5E-07 57.8 14.8 141 244-414 21-174 (326)
32 1pcl_A Pectate lyase E; lyase 96.6 0.062 2.1E-06 55.8 17.0 134 289-450 75-228 (355)
33 3zsc_A Pectate trisaccharide-l 96.4 0.018 6.2E-07 59.4 11.2 86 275-380 46-143 (340)
34 1gq8_A Pectinesterase; hydrola 96.1 0.044 1.5E-06 56.2 12.7 115 325-448 113-242 (319)
35 1pe9_A Pectate lyase A; parall 95.9 0.037 1.3E-06 57.7 10.9 146 274-449 52-238 (361)
36 1xg2_A Pectinesterase 1; prote 95.8 0.06 2.1E-06 55.1 12.0 115 325-448 109-238 (317)
37 2nsp_A Pectinesterase A; micha 95.8 0.038 1.3E-06 57.2 10.5 78 330-415 136-230 (342)
38 1k5c_A Endopolygalacturonase; 95.7 0.027 9.2E-07 58.1 9.0 136 329-482 100-250 (335)
39 1vbl_A Pectate lyase 47; PL 47 95.4 0.098 3.3E-06 55.5 12.0 126 297-449 132-282 (416)
40 2o04_A Pectate lyase, PL; hexa 95.4 0.079 2.7E-06 55.9 11.2 127 296-449 126-276 (399)
41 3uw0_A Pectinesterase; right-h 95.2 0.088 3E-06 54.9 10.9 113 353-481 113-253 (364)
42 1x0c_A Isopullulanase; glycosi 95.1 0.16 5.6E-06 55.7 12.9 108 331-450 290-406 (549)
43 3grh_A YBHC, acyl-COA thioeste 94.9 0.13 4.4E-06 54.4 11.0 112 355-482 194-330 (422)
44 1ogo_X Dextranase; hydrolase, 93.9 0.66 2.3E-05 51.1 14.4 107 332-450 331-444 (574)
45 2iq7_A Endopolygalacturonase; 90.1 5.8 0.0002 40.5 15.3 110 332-449 130-255 (339)
46 1ia5_A Polygalacturonase; glyc 89.6 5.4 0.00018 40.8 14.5 112 332-449 134-259 (339)
47 1hg8_A Endopolygalacturonase; 89.0 3.4 0.00012 42.4 12.6 112 332-449 134-267 (349)
48 2x6w_A Tail spike protein; vir 88.4 1.9 6.5E-05 47.5 10.5 28 256-288 64-92 (600)
49 2uvf_A Exopolygalacturonase; G 88.3 5.7 0.00019 44.0 14.5 108 332-449 361-490 (608)
50 1nhc_A Polygalacturonase I; be 87.8 9.2 0.00031 38.9 14.8 112 329-449 126-254 (336)
51 1ru4_A Pectate lyase, PEL9A; p 86.6 10 0.00034 39.7 14.6 84 328-415 131-230 (400)
52 1rmg_A Rgase A, rhamnogalactur 84.7 7.4 0.00025 41.0 12.5 20 362-381 184-203 (422)
53 1bhe_A PEHA, polygalacturonase 84.1 16 0.00056 37.6 14.7 109 332-449 181-304 (376)
54 1k5c_A Endopolygalacturonase; 82.8 16 0.00055 37.2 13.7 112 331-449 125-251 (335)
55 3eqn_A Glucan 1,3-beta-glucosi 82.0 2 6.8E-05 48.5 6.8 101 256-372 417-531 (758)
56 1czf_A Polygalacturonase II; b 81.7 4.6 0.00016 41.7 9.2 115 329-449 152-280 (362)
57 1x0c_A Isopullulanase; glycosi 81.7 14 0.00048 40.3 13.5 78 334-415 318-405 (549)
58 2vbk_A Tailspike-protein; vira 81.3 4.2 0.00014 43.2 8.6 46 255-307 67-118 (514)
59 3jur_A EXO-poly-alpha-D-galact 79.0 28 0.00095 36.9 14.4 107 332-449 220-351 (448)
60 1pxz_A Major pollen allergen J 69.4 7.1 0.00024 40.1 6.5 65 375-446 150-222 (346)
61 2inu_A Insulin fructotransfera 63.6 38 0.0013 35.5 10.6 66 326-395 161-247 (410)
62 3gqn_A Preneck appendage prote 62.9 1E+02 0.0034 34.9 14.5 19 362-380 234-252 (772)
63 3gq8_A Preneck appendage prote 58.2 1.9E+02 0.0064 31.9 15.4 98 288-396 143-247 (609)
64 1ogo_X Dextranase; hydrolase, 57.8 66 0.0023 35.2 11.9 80 332-415 354-443 (574)
65 1dbg_A Chondroitinase B; beta 56.1 39 0.0013 36.4 9.6 95 356-450 88-209 (506)
66 1vcl_A Hemolytic lectin CEL-II 52.1 0.69 2.4E-05 49.2 -5.0 94 247-348 295-394 (432)
67 1h80_A IOTA-carrageenase; hydr 31.9 1.7E+02 0.0059 30.9 9.8 79 330-414 171-270 (464)
68 3dxr_B Mitochondrial import in 29.8 1.7E+02 0.0058 24.1 7.3 32 86-117 55-86 (95)
69 1qcx_A Pectin lyase B; beta-he 20.4 1.5E+02 0.0052 30.3 6.4 57 357-413 126-197 (359)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=1e-96 Score=761.90 Aligned_cols=314 Identities=53% Similarity=0.928 Sum_probs=301.0
Q ss_pred eeEEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEEEEeecCCceEEEecCCCceEEeccccccCCcc
Q 044042 243 TKIVTVSQDGKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYISIAKNKKILMMIGDGIGKTIITGDRNFVDGWT 322 (560)
Q Consensus 243 ~~~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~ 322 (560)
+++++|++||+|+|+|||+||++||++ +++|++|+|+||+|+|+|.|++.|++|||+|+|+++|+|+++.+..+|.+
T Consensus 2 ~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~ 78 (317)
T 1xg2_A 2 IANAVVAQDGTGDYQTLAEAVAAAPDK---SKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGST 78 (317)
T ss_dssp CCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCC
T ss_pred CceEEECCCCCCCcccHHHHHhhcccC---CCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCc
Confidence 468999999999999999999999998 57899999999999999999998999999999999999999998889999
Q ss_pred ccccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEcceeeeecc
Q 044042 323 TFNSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGTIDFIFGN 402 (560)
Q Consensus 323 t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~vDfIfG~ 402 (560)
|++++||.|.|++|+++||||+|++|+.++|||||++.+|+++|+||+|+|||||||+|.+||||++|+|+|+||||||+
T Consensus 79 t~~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~ 158 (317)
T 1xg2_A 79 TFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGN 158 (317)
T ss_dssp SGGGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEESSSCEEEC
T ss_pred ccceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEeceeEEcCC
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeeccccccccCcceEEeeccCCCCCcEEEeccCCCC
Q 044042 403 AAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYLGRPWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 403 ~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~ 482 (560)
++++||+|+|+++++.+++.++||||||+++.+++||||+||+|++++++.+.....++||||||++|||+|||+|+|++
T Consensus 159 ~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 159 AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGG 238 (317)
T ss_dssp CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEEESCEECT
T ss_pred ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEEEecccCC
Confidence 99999999999999887888999999999999999999999999999887655455689999999999999999999999
Q ss_pred ccCCCCCcCCCCCCCCcccEEEEecccCCCCCCCCcccCCCcccCC-HHHHcccchhccccCCCCcCCCCCCcCCCCC
Q 044042 483 LINPSGWQIWTGDFALSTLYYAEYDNRGPGSNSANRVTWPGYHVIN-ATDAANFTVSNFLLGDVWLPQTGVPYTGGLI 559 (560)
Q Consensus 483 ~i~p~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~~~Rv~w~~~~~l~-~~ea~~~t~~~~~~g~~W~p~~~~p~~~~~~ 559 (560)
+|+|+||.+|+++++++|++|+||+|+||||++++||+|+++|+|+ ++||++|++.+||+|++|+|.+||||.+||.
T Consensus 239 ~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~~ 316 (317)
T 1xg2_A 239 LINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGLY 316 (317)
T ss_dssp TBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCHHHHGGGSHHHHSCTHHHHGGGCCCCCCSSC
T ss_pred cccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCHHHHHHhhHHhhcCCCCCcCCCCcccccccc
Confidence 9999999999999999999999999999999999999999988886 5899999999999999999999999999985
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=2.9e-96 Score=759.20 Aligned_cols=314 Identities=54% Similarity=0.929 Sum_probs=300.6
Q ss_pred eeeEEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEEEEeecCCceEEEecCCCceEEeccccccCCc
Q 044042 242 VTKIVTVSQDGKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYISIAKNKKILMMIGDGIGKTIITGDRNFVDGW 321 (560)
Q Consensus 242 ~~~~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~ 321 (560)
++++++|++||+|+|+|||+||++||++ +++|++|+|+||+|+|+|.|++.|++|||+|+|+++|+|+++.+..+|+
T Consensus 5 ~~~~i~V~~dGsg~f~TIq~AI~aap~~---~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~ 81 (319)
T 1gq8_A 5 VGPNVVVAADGSGDYKTVSEAVAAAPED---SKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGS 81 (319)
T ss_dssp SCCSEEECTTSCSSBSSHHHHHHHSCSS---CSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTC
T ss_pred ccceEEECCCCCCCccCHHHHHHhcccc---CCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCC
Confidence 4578999999999999999999999998 5789999999999999999999899999999999999999999888999
Q ss_pred cccccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEcceeeeec
Q 044042 322 TTFNSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGTIDFIFG 401 (560)
Q Consensus 322 ~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~vDfIfG 401 (560)
+|++++||.|.|++|+++||||+|++|+.++|||||++.+|+++|+||+|+|||||||++.+||||++|+|+|+||||||
T Consensus 82 ~t~~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG 161 (319)
T 1gq8_A 82 TTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFG 161 (319)
T ss_dssp CTGGGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEESSSCEEE
T ss_pred CccceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEeeeeEEec
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeeccccccccCcceEEeeccCCCCCcEEEeccCCC
Q 044042 402 NAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYLGRPWKEYSRTVIMQSFMD 481 (560)
Q Consensus 402 ~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~ 481 (560)
+++++||+|+|+++++.+++.++||||||+++.+++||||+||+|++++++.+.....++||||||++|+|+|||+|+|+
T Consensus 162 ~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~ 241 (319)
T 1gq8_A 162 NAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSIT 241 (319)
T ss_dssp SCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEEC
T ss_pred CCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccCC
Confidence 99999999999999988788899999999999999999999999999987765444568999999999999999999999
Q ss_pred CccCCCCCcCCCCCCCCcccEEEEecccCCCCCCCCcccCCCcccCC-HHHHcccchhccccCCCCcCCCCCCcCCCC
Q 044042 482 SLINPSGWQIWTGDFALSTLYYAEYDNRGPGSNSANRVTWPGYHVIN-ATDAANFTVSNFLLGDVWLPQTGVPYTGGL 558 (560)
Q Consensus 482 ~~i~p~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~~~Rv~w~~~~~l~-~~ea~~~t~~~~~~g~~W~p~~~~p~~~~~ 558 (560)
++|+|+||.+|++++++++++|+||+|+||||++++||+|+++|+|+ ++||++|++.+||+|++|+|.+||||.+||
T Consensus 242 ~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 242 NVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp TTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred CcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 99999999999999899999999999999999999999999988886 589999999999999999999999999997
No 3
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=1.6e-80 Score=650.69 Aligned_cols=287 Identities=31% Similarity=0.549 Sum_probs=241.3
Q ss_pred eeEEEEcCC-CCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEEEEeecCCceEEEecCCCceEEecccccc---
Q 044042 243 TKIVTVSQD-GKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYISIAKNKKILMMIGDGIGKTIITGDRNFV--- 318 (560)
Q Consensus 243 ~~~~~V~~d-g~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~--- 318 (560)
..+++|++| |+|+|+|||+||+++|++ ++|++|+|+||+|+|+|.|+| ++|+|+|+|+++|||+++.+..
T Consensus 30 ~~~~~V~~~~g~g~f~TIq~Ai~aa~~~----~~~~~I~I~~G~Y~E~v~I~k--~~itl~G~g~~~TiIt~~~~~~~~~ 103 (364)
T 3uw0_A 30 QYNAVVSTTPQGDEFSSINAALKSAPKD----DTPFIIFLKNGVYTERLEVAR--SHVTLKGENRDGTVIGANTAAGMLN 103 (364)
T ss_dssp --------------CCCHHHHHHHSCSS----SSCEEEEECSEEECCCEEECS--TTEEEEESCTTTEEEEECCCTTSBC
T ss_pred CceEEEcCCCCCCCcccHHHHHhhcccC----CCcEEEEEeCCEEEEEEEEcC--CeEEEEecCCCCeEEEccccccccc
Confidence 468999999 999999999999999987 368999999999999999974 6899999999999999987542
Q ss_pred ---CCccccccceEEEEeCcEEEEEeeEeeCCC-----------C---CCCceeeeec--CCCeEEEEEceeccccceee
Q 044042 319 ---DGWTTFNSATFAVMAPNFVAVDISFRNTAG-----------P---SKHQAVALRS--GADLSTFYSCSFEGYQDSLY 379 (560)
Q Consensus 319 ---~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g-----------~---~~~qAvAl~~--~~d~~~~~~c~~~g~QDTL~ 379 (560)
++++|++++||.|.|++|+++||||+|+++ | ..+|||||++ ++|+++||||+|+|||||||
T Consensus 104 ~~g~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy 183 (364)
T 3uw0_A 104 PQGEKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLY 183 (364)
T ss_dssp TTCSBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEE
T ss_pred cccccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceE
Confidence 347899999999999999999999999985 2 3589999999 59999999999999999999
Q ss_pred ec-CcceeeeccEEEcceeeeeccceEEEeeeEEEEecCCC--CCceEEEecCCCCCCCCceEEEeeeEEeecccccccc
Q 044042 380 TH-SQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPMS--GQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSN 456 (560)
Q Consensus 380 ~~-~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~~--~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~ 456 (560)
+| .+||||++|+|+|+||||||+|++|||+|+|+++.+.. .+.|+||||+ +++++++||||+||+|++++++..
T Consensus 184 ~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~-~~~~~~~G~vf~~c~i~~~~~~~~-- 260 (364)
T 3uw0_A 184 SKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPS-TLTTSPYGLIFINSRLTKEPGVPA-- 260 (364)
T ss_dssp ECTTCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEEC-CCTTCSCCEEEESCEEEECTTCCS--
T ss_pred eCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCC-cCCCCCcEEEEEeeEEecCCCCcc--
Confidence 99 89999999999999999999999999999999986532 3569999995 567899999999999999876432
Q ss_pred CcceEEeeccCCCC--------------CcEEEeccCCCCccCCCCCcCCCCCC--------CCcccEEEEecccCCCCC
Q 044042 457 QTVQTYLGRPWKEY--------------SRTVIMQSFMDSLINPSGWQIWTGDF--------ALSTLYYAEYDNRGPGSN 514 (560)
Q Consensus 457 ~~~~~yLGRpW~~~--------------s~~v~~~s~~~~~i~p~GW~~w~~~~--------~~~t~~f~Ey~n~GpGa~ 514 (560)
.++||||||++| +|||||+|+|+++| +||.+|++.. ..++++|+||+|+||||+
T Consensus 261 --~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpGa~ 336 (364)
T 3uw0_A 261 --NSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGPGAA 336 (364)
T ss_dssp --SCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCC
T ss_pred --ccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCCCCC
Confidence 478999999985 49999999999999 9999998642 234678999999999998
Q ss_pred CCCcccCCCcccCCHHHHcccchhccccCCCCcCC
Q 044042 515 SANRVTWPGYHVINATDAANFTVSNFLLGDVWLPQ 549 (560)
Q Consensus 515 ~~~Rv~w~~~~~l~~~ea~~~t~~~~~~g~~W~p~ 549 (560)
++.+- ++|+++||++||+++||.| |+|.
T Consensus 337 ~~~~r-----~~ls~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 337 INEGR-----RQLSAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp CSTTS-----CBCCHHHHGGGSHHHHSTT--CCC-
T ss_pred cCCce-----eECCHHHHhhccHHHhhcC--CCCC
Confidence 64321 3799999999999999975 9995
No 4
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=1.6e-80 Score=647.84 Aligned_cols=288 Identities=32% Similarity=0.536 Sum_probs=256.1
Q ss_pred eeEEEEc--CCCCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEEEEeecCCceEEEecCCCceEEeccccc---
Q 044042 243 TKIVTVS--QDGKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYISIAKNKKILMMIGDGIGKTIITGDRNF--- 317 (560)
Q Consensus 243 ~~~~~V~--~dg~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~~~tiI~~~~~~--- 317 (560)
..+++|+ +||+|+|+|||+||+++|++ + +|++|+|+||+|+|+|.|+| ++|||+|+|+++|+|+++.+.
T Consensus 3 ~~~~vV~~~~~g~g~f~TIq~Ai~aap~~---~-~~~~I~I~~G~Y~E~V~I~k--~~Itl~G~g~~~tiI~~~~~~~~~ 76 (342)
T 2nsp_A 3 TYNAVVSKSSSDGKTFKTIADAIASAPAG---S-TPFVILIKNGVYNERLTITR--NNLHLKGESRNGAVIAAATAAGTL 76 (342)
T ss_dssp CCSEEECSCSSSCSCBSSHHHHHHTSCSS---S-SCEEEEECSEEEECCEEECS--TTEEEEESCTTTEEEEECCCTTCB
T ss_pred ccEEEEccCCCCCCCcchHHHHHHhcccC---C-CcEEEEEeCCEEEEEEEEec--CeEEEEecCCCCeEEEeccccccc
Confidence 4689999 99999999999999999987 4 78999999999999999975 689999999999999998753
Q ss_pred ---cCCccccccceEEEEeCcEEEEEeeEeeCC-----------C---CCCCceeee--ecCCCeEEEEEceecccccee
Q 044042 318 ---VDGWTTFNSATFAVMAPNFVAVDISFRNTA-----------G---PSKHQAVAL--RSGADLSTFYSCSFEGYQDSL 378 (560)
Q Consensus 318 ---~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~-----------g---~~~~qAvAl--~~~~d~~~~~~c~~~g~QDTL 378 (560)
.++++|++++||.|.+++|+++||||+|++ + ..++||||| ++.+|+++||||+|+||||||
T Consensus 77 ~~~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTL 156 (342)
T 2nsp_A 77 KSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATL 156 (342)
T ss_dssp CTTSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCE
T ss_pred ccccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceE
Confidence 134678999999999999999999999998 2 236899999 999999999999999999999
Q ss_pred eecCcceeeeccEEEcceeeeeccceEEEeeeEEEEecCC-CCC---ceEEEecCCCCCCCCceEEEeeeEEeecccccc
Q 044042 379 YTHSQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPM-SGQ---YNVITAQGRTDPNQNTGISIHNCTFRAADELAL 454 (560)
Q Consensus 379 ~~~~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~-~~~---~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~ 454 (560)
|++.+||||++|+|+|+||||||+|+++||+|+|+++++. .++ .++||||+ +++.+++||||+||+|++++++.+
T Consensus 157 y~~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~-~~~~~~~G~vf~~c~i~~~~~~~~ 235 (342)
T 2nsp_A 157 YVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVP 235 (342)
T ss_dssp EECSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEEC-CBTTCSCCEEEESCEEEESSTTSC
T ss_pred EECCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccC-CCCCCCCEEEEEcCEEecCCCCCc
Confidence 9999999999999999999999999999999999998752 222 38999995 567899999999999999876433
Q ss_pred ccCcceEEeeccCCCCC--------------cEEEeccCCCCccCCCCCcCCCCC--------CCCcccEEEEecccCCC
Q 044042 455 SNQTVQTYLGRPWKEYS--------------RTVIMQSFMDSLINPSGWQIWTGD--------FALSTLYYAEYDNRGPG 512 (560)
Q Consensus 455 ~~~~~~~yLGRpW~~~s--------------~~v~~~s~~~~~i~p~GW~~w~~~--------~~~~t~~f~Ey~n~GpG 512 (560)
..++||||||++|| |+|||+|+|+++|+ ||.+|++. +.+++++|+||+|+|||
T Consensus 236 ---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~GpG 310 (342)
T 2nsp_A 236 ---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAG 310 (342)
T ss_dssp ---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBSTT
T ss_pred ---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEecccCC
Confidence 24799999999999 99999999999998 99999874 34467899999999999
Q ss_pred CCCCCcccCCCcccCCHHHHcccchhccccCCCCcCC
Q 044042 513 SNSANRVTWPGYHVINATDAANFTVSNFLLGDVWLPQ 549 (560)
Q Consensus 513 a~~~~Rv~w~~~~~l~~~ea~~~t~~~~~~g~~W~p~ 549 (560)
|+++ +|. ++|+++||++|++++||+| |+|.
T Consensus 311 a~~~---~~~--~~l~~~ea~~~t~~~~i~~--W~p~ 340 (342)
T 2nsp_A 311 ATVS---KDR--RQLTDAQAAEYTQSKVLGD--WTPT 340 (342)
T ss_dssp CCCS---TTS--CBCCHHHHGGGSHHHHHTT--CCCC
T ss_pred CCCC---CCc--eECCHHHHHhhhHHhhhcc--CCCC
Confidence 9874 222 5899999999999999974 9996
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=6.3e-76 Score=618.51 Aligned_cols=264 Identities=24% Similarity=0.280 Sum_probs=232.4
Q ss_pred eeeEEEEcCCCCC--CcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEEEEeecCCceEEEecCCCceEEecccc---
Q 044042 242 VTKIVTVSQDGKA--KFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYISIAKNKKILMMIGDGIGKTIITGDRN--- 316 (560)
Q Consensus 242 ~~~~~~V~~dg~g--~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~~~tiI~~~~~--- 316 (560)
.+++++|++||+| +|+|||+||+++|+.. +..|++|+|+||+|+|+|.|++.|++|||+|+|.++++|++..+
T Consensus 73 ~~~~ivVa~dGsG~~~f~TIqeAVdaap~~~--~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~ 150 (422)
T 3grh_A 73 AQPDFVVGPAGTQGVTHTTIQAAVDAAIIKR--TNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDG 150 (422)
T ss_dssp SSCSEEECSTTCTTCCBSSHHHHHHHHHTTC--CSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCCT
T ss_pred CCccEEEeCCCCCCcCcCCHHHHHHhchhcC--CCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeecccc
Confidence 4579999999998 9999999999997532 56789999999999999999999999999999998877764321
Q ss_pred ----------------cc-----------------CCccccccceEEEEeCcEEEEEeeEeeCCCC----CCCceeeeec
Q 044042 317 ----------------FV-----------------DGWTTFNSATFAVMAPNFVAVDISFRNTAGP----SKHQAVALRS 359 (560)
Q Consensus 317 ----------------~~-----------------~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~----~~~qAvAl~~ 359 (560)
.. ...+|+.||||.|.|++|+++||||+|++|+ .++|||||++
T Consensus 151 ~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v 230 (422)
T 3grh_A 151 GMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT 230 (422)
T ss_dssp TSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE
T ss_pred cccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe
Confidence 01 1236789999999999999999999999986 4799999999
Q ss_pred CCCeEEEEEceeccccceeee------------cCcceeeeccEEEcceeeeeccceEEEeeeEEEEecCCCCCceEEEe
Q 044042 360 GADLSTFYSCSFEGYQDSLYT------------HSQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPMSGQYNVITA 427 (560)
Q Consensus 360 ~~d~~~~~~c~~~g~QDTL~~------------~~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~~~~~~~itA 427 (560)
.+|+++||+|+|+|||||||+ +.+||||++|+|+|+||||||+|++|||+|+|+++++..++.++|||
T Consensus 231 ~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~ITA 310 (422)
T 3grh_A 231 DGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFA 310 (422)
T ss_dssp CCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEEE
T ss_pred cCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEEe
Confidence 999999999999999999998 57999999999999999999999999999999999876666799999
Q ss_pred cCCCCCCCCceEEEeeeEEeeccccccccCcceEEeeccCCCCCc----EEEeccCCCCccCC-CCCcCCCCC---CCC-
Q 044042 428 QGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYLGRPWKEYSR----TVIMQSFMDSLINP-SGWQIWTGD---FAL- 498 (560)
Q Consensus 428 ~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~----~v~~~s~~~~~i~p-~GW~~w~~~---~~~- 498 (560)
+ |+++.+++||||+||+|+++++ .++||||||++|+| ||||+|+|+++|+| +||.+|... |..
T Consensus 311 ~-~t~~~~~~Gfvf~nC~ita~~~-------~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~~ 382 (422)
T 3grh_A 311 P-ATLSNIYYGFLAVNSRFNAFGD-------GVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGN 382 (422)
T ss_dssp E-CCBTTCCCCEEEESCEEEECSS-------SCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCCC
T ss_pred c-CCCCCCCCEEEEECCEEEeCCC-------CCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCcccc
Confidence 8 7889999999999999998652 47999999999998 69999999999998 999999432 111
Q ss_pred -----------------cccEEEEecccCCCCCC
Q 044042 499 -----------------STLYYAEYDNRGPGSNS 515 (560)
Q Consensus 499 -----------------~t~~f~Ey~n~GpGa~~ 515 (560)
...+|+||+|+|||+-.
T Consensus 383 ~~~~~~~~~~~r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 383 TGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp CCEEETTTEEECCTTCTTSCEEEEESCBSGGGC-
T ss_pred cccccccccccccCCCcchhheeEecccCCCccc
Confidence 35689999999999853
No 6
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.95 E-value=3.1e-28 Score=225.56 Aligned_cols=144 Identities=15% Similarity=0.245 Sum_probs=129.2
Q ss_pred hhcccCCCCCChhcHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhHHHHHH
Q 044042 28 LRNHLQVHSKNRSYCKSMLANANPTADVYTYGRFSIRKAFSQSRKFLHLIDTYLKRRSTLSTAAIRALEDCNSLTDLNVD 107 (560)
Q Consensus 28 ~~~~~C~~T~yp~lC~ssL~~~~~~~dp~~l~~~al~~a~~~a~~a~~~i~~ll~~~~~~~~~~k~AL~DC~el~~davd 107 (560)
.++.+|++|+||++|+++|.+.....+|.+|++++|++++.++.++..++.+++... .+++.+.||+||.|+|+++++
T Consensus 7 ~i~~~C~~T~~~~~C~~sL~p~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~a~~ 84 (153)
T 1x91_A 7 EMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGG--VDPRSKLAYRSCVDEYESAIG 84 (153)
T ss_dssp STTTGGGGSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCChhHHHHHhCcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999954434579999999999999999999999999987654 489999999999999999999
Q ss_pred HHHHHHHHhccccCCCCccChhhHHHHHHHhhhhhHHHHHhhhhhcccchhhcccccccchhhHHHHHHHHHhhhcc
Q 044042 108 YLSSCFQTLNTTREILPAMQADDVQTRLSAVLTNQQTCLDGLQAAANSAESIKNGVSVPLFEDTKLSSVLLALVRKG 184 (560)
Q Consensus 108 ~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~l~~~~~~v~~L~SNALAiv~~~ 184 (560)
+|++++.+|.. ..++|++||||+||||++||+|||.+. + .++++|...+.++.+|+||+|||++.+
T Consensus 85 ~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~-~---~~~~~l~~~~~~~~~l~s~aLai~~~l 150 (153)
T 1x91_A 85 NLEEAFEHLAS-------GDGMGMNMKVSAALDGADTCLDDVKRL-R---SVDSSVVNNSKTIKNLCGIALVISNML 150 (153)
T ss_dssp HHHHHHHHHHT-------TCHHHHHHHHHHHHHHHHHHHHHHTTC-S---SCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHh-------cCHHHHHHHHHHHHccHhHHHHHhccC-C---CCcCHHHHHhHHHHHHHHHHHHHHHHc
Confidence 99999999984 358999999999999999999999876 3 356788899999999999999999853
No 7
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=99.95 E-value=3.6e-28 Score=224.73 Aligned_cols=143 Identities=18% Similarity=0.254 Sum_probs=129.0
Q ss_pred hhcccCCCCCChhcHHHhhccCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhHHHH
Q 044042 28 LRNHLQVHSKNRSYCKSMLANANP--TADVYTYGRFSIRKAFSQSRKFLHLIDTYLKRRSTLSTAAIRALEDCNSLTDLN 105 (560)
Q Consensus 28 ~~~~~C~~T~yp~lC~ssL~~~~~--~~dp~~l~~~al~~a~~~a~~a~~~i~~ll~~~~~~~~~~k~AL~DC~el~~da 105 (560)
.++.+|++|+||++|+++|.+.|. ..||.+|++++|++++.++.++..++.+++... .+++.+.||+||.|+|+++
T Consensus 5 ~i~~~C~~T~~~~~C~~sL~~~~~~~~~~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~--~~~~~~~al~dC~e~y~~a 82 (153)
T 1xg2_B 5 LISEICPKTRNPSLCLQALESDPRSASKDLKGLGQFSIDIAQASAKQTSKIIASLTNQA--TDPKLKGRYETCSENYADA 82 (153)
T ss_dssp HHHHHGGGSSCHHHHHHHHHTCTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHH
Confidence 378899999999999999998763 479999999999999999999999999987643 4899999999999999999
Q ss_pred HHHHHHHHHHhccccCCCCccChhhHHHHHHHhhhhhHHHHHhhhhhcccchhhcccccccchhhHHHHHHHHHhhhc
Q 044042 106 VDYLSSCFQTLNTTREILPAMQADDVQTRLSAVLTNQQTCLDGLQAAANSAESIKNGVSVPLFEDTKLSSVLLALVRK 183 (560)
Q Consensus 106 vd~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~l~~~~~~v~~L~SNALAiv~~ 183 (560)
+++|++++.+|.. ..++|++|||||||||++||+|||.+. + .++++|...+.++.+|+||+|||++.
T Consensus 83 ~~~L~~a~~~l~~-------~~~~d~~t~lSaAlt~~~tC~dgf~~~-~---~~~~~l~~~~~~~~~l~s~aLai~~~ 149 (153)
T 1xg2_B 83 IDSLGQAKQFLTS-------GDYNSLNIYASAAFDGAGTCEDSFEGP-P---NIPTQLHQADLKLEDLCDIVLVISNL 149 (153)
T ss_dssp HHHHHHHHHHHHH-------TCHHHHHHHHHHHHHHHHHHHHHCCSS-S---CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-------CCHHHHHHHHHHHhcccchHHHHhccC-C---CCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999984 358999999999999999999999876 3 25678888999999999999999984
No 8
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=99.94 E-value=4e-27 Score=217.48 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=126.0
Q ss_pred hhcccCCCCCChhcHHHhhccCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhHHHH
Q 044042 28 LRNHLQVHSKNRSYCKSMLANAN--PTADVYTYGRFSIRKAFSQSRKFLHLIDTYLKRRSTLSTAAIRALEDCNSLTDLN 105 (560)
Q Consensus 28 ~~~~~C~~T~yp~lC~ssL~~~~--~~~dp~~l~~~al~~a~~~a~~a~~~i~~ll~~~~~~~~~~k~AL~DC~el~~da 105 (560)
.++.+|++|+||++|+++|.+.| ..+||.+|++++|++++.++.++..++.+++... .+++.+.||+||.|+|+++
T Consensus 6 ~I~~~C~~T~~~~~C~~sL~~~~~s~~ad~~~la~~ai~~~~~~a~~~~~~i~~l~~~~--~~~~~~~al~dC~e~y~~a 83 (150)
T 2cj4_A 6 LVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSN--PPAAWKGPLKNCAFSYKVI 83 (150)
T ss_dssp HHHHHHHTSSCHHHHHHHHHTSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCccHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHHH
Confidence 37889999999999999998875 3569999999999999999999999999987543 3788999999999999999
Q ss_pred H-HHHHHHHHHhccccCCCCccChhhHHHHHHHhhhhhHHHHHhhhhhcccchhhcccccccchhhHHHHHHHHHhhhcc
Q 044042 106 V-DYLSSCFQTLNTTREILPAMQADDVQTRLSAVLTNQQTCLDGLQAAANSAESIKNGVSVPLFEDTKLSSVLLALVRKG 184 (560)
Q Consensus 106 v-d~L~~S~~~l~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~e~~~~~~~~~~~l~~~~~~v~~L~SNALAiv~~~ 184 (560)
+ ++|++++.+|.. ..++++++|||+|+||++||+|||.+. +++|...+.++.+|+||+|||++.+
T Consensus 84 ~~~~L~~a~~~l~~-------~~~~~~~t~lsaAlt~~~tC~dgf~~~-------~~pl~~~~~~~~~l~s~aLaii~~l 149 (150)
T 2cj4_A 84 LTASLPEAIEALTK-------GDPKFAEDGMVGSSGDAQECEEYFKGS-------KSPFSALNIAVHELSDVGRAIVRNL 149 (150)
T ss_dssp HHTHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHHHHTTTTS-------CCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHhhCCC-------CCccHHHHHHHHHHHHHHHHHHHhh
Confidence 9 799999999974 368999999999999999999999743 3478889999999999999999853
No 9
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.62 E-value=8.5e-15 Score=155.73 Aligned_cols=142 Identities=17% Similarity=0.191 Sum_probs=112.8
Q ss_pred eeeEEEEcCCCC----C-----CcccHHHHHHhCCCCCCCCCceEEEEEeCcEEe--------EEEEEeecC---CceEE
Q 044042 242 VTKIVTVSQDGK----A-----KFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQ--------EYISIAKNK---KILMM 301 (560)
Q Consensus 242 ~~~~~~V~~dg~----g-----~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~--------E~v~I~~~~---~~itl 301 (560)
...++.|+++|+ | .| |||+|+++|+++ ++|+|++|+|+ |.|.+.++. .+|+|
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~pG-------dtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti 84 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVNPG-------ELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYV 84 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCCTT-------CEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEE
T ss_pred CccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCCCC-------CEEEECCCeEccccccccceeEEecCCCCCCCCEEE
Confidence 356888998864 4 68 999999999988 79999999999 788887643 46999
Q ss_pred EecCCCceEEeccccccCCccccccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccce-eee
Q 044042 302 IGDGIGKTIITGDRNFVDGWTTFNSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDS-LYT 380 (560)
Q Consensus 302 ~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDT-L~~ 380 (560)
.|++.++++|++.. ..+.....+.+|.|.++++++++|+|+|+..+ +|++.+++..|++|+|.+.+|+ |++
T Consensus 85 ~~~~g~~~vI~~~~--~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~~------GI~v~gs~~~i~n~~i~~n~~~GI~l 156 (400)
T 1ru4_A 85 AAANCGRAVFDFSF--PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQ------GAYVIGSHNTFENTAFHHNRNTGLEI 156 (400)
T ss_dssp EEGGGCCEEEECCC--CTTCCCTTCCSEEECSSCEEEESEEEESCSSC------SEEECSSSCEEESCEEESCSSCSEEE
T ss_pred EEecCCCCEEeCCc--cCCccccceeEEEEECCeEEEEeEEEEeCCCC------cEEEeCCCcEEEeEEEECCCceeEEE
Confidence 99988899999321 11111111367899999999999999998642 7788889999999999999994 888
Q ss_pred cCc--ceeeeccEEEcceeee
Q 044042 381 HSQ--RQFYRECDIYGTIDFI 399 (560)
Q Consensus 381 ~~~--r~~~~~c~I~G~vDfI 399 (560)
... +..+++|+|+++.|..
T Consensus 157 ~~~~s~n~I~nn~i~~N~d~~ 177 (400)
T 1ru4_A 157 NNGGSYNTVINSDAYRNYDPK 177 (400)
T ss_dssp CTTCCSCEEESCEEECCCCTT
T ss_pred EcccCCeEEEceEEEcccCcc
Confidence 753 5678889888887753
No 10
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.45 E-value=3.8e-13 Score=146.53 Aligned_cols=147 Identities=16% Similarity=0.255 Sum_probs=114.8
Q ss_pred EEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE-EEEEeec---CCceEEEecCCCceEEeccccccCC
Q 044042 245 IVTVSQDGKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQE-YISIAKN---KKILMMIGDGIGKTIITGDRNFVDG 320 (560)
Q Consensus 245 ~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E-~v~I~~~---~~~itl~G~g~~~tiI~~~~~~~~g 320 (560)
++.|+ ++.+||+||++|+++ ++|+|++|+|+| .|.|.++ ..+|+|.|++.++++|.|.
T Consensus 25 ~i~V~-----~~~~Lq~Ai~~A~pG-------DtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------ 86 (506)
T 1dbg_A 25 GQVVA-----SNETLYQVVKEVKPG-------GLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------ 86 (506)
T ss_dssp -CEEC-----SHHHHHHHHHHCCTT-------CEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------
T ss_pred EEEeC-----CHHHHHHHHHhCCCC-------CEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------
Confidence 35676 367999999999998 799999999998 8888432 2479999997778999875
Q ss_pred ccccccceEEEEeCcEEEEEeeEeeCCCCCC----CceeeeecCCCeEEEEEceeccccce--eeec---------Ccce
Q 044042 321 WTTFNSATFAVMAPNFVAVDISFRNTAGPSK----HQAVALRSGADLSTFYSCSFEGYQDS--LYTH---------SQRQ 385 (560)
Q Consensus 321 ~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~----~qAvAl~~~~d~~~~~~c~~~g~QDT--L~~~---------~~r~ 385 (560)
.+|.|.|++++++||+|+|..+... ....++.+.++++.|.+|.|.++|++ +|++ +.+.
T Consensus 87 ------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n 160 (506)
T 1dbg_A 87 ------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHC 160 (506)
T ss_dssp ------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSC
T ss_pred ------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeecccc
Confidence 4799999999999999999865321 11234556689999999999999999 7774 3467
Q ss_pred eeeccEEEccee---eeecc---------------ceEEEeeeEEEEe
Q 044042 386 FYRECDIYGTID---FIFGN---------------AAVVLQNCNIYLR 415 (560)
Q Consensus 386 ~~~~c~I~G~vD---fIfG~---------------~~a~f~~c~i~~~ 415 (560)
.+++|+|+|..+ ++=|+ ...++++|.|..+
T Consensus 161 ~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~ 208 (506)
T 1dbg_A 161 RIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNP 208 (506)
T ss_dssp EEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEEC
T ss_pred EEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEccc
Confidence 899999999754 22121 3568899998865
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.67 E-value=8.1e-08 Score=100.77 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=88.7
Q ss_pred EEEEEeCcEEe--EEEEEeecCCceEEEecCCCceE---EeccccccC-----Ccc--------ccccceEEEEe-----
Q 044042 277 FLIYIKEGVYQ--EYISIAKNKKILMMIGDGIGKTI---ITGDRNFVD-----GWT--------TFNSATFAVMA----- 333 (560)
Q Consensus 277 ~~I~I~~G~Y~--E~v~I~~~~~~itl~G~g~~~ti---I~~~~~~~~-----g~~--------t~~sat~~v~~----- 333 (560)
.+|+|.||+|+ ++|.|+| |+|+|.|++. .++ |.++-.... +.+ -...+.|.|++
T Consensus 58 dvI~L~~G~Y~l~g~ivIdk--p~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r 134 (410)
T 2inu_A 58 AAIIIPPGDYDLHTQVVVDV--SYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPR 134 (410)
T ss_dssp EEEECCSEEEEECSCEEECC--TTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSC
T ss_pred CEEEECCCeeccCCcEEEec--CcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcc
Confidence 89999999997 7999985 4699999874 333 663311100 000 01446677777
Q ss_pred -CcEEEEEeeEeeC-----CCCCCCceeeeecC--CCeEEEEEceeccccceeeecCcce-eeeccEEEc--ceeeeecc
Q 044042 334 -PNFVAVDISFRNT-----AGPSKHQAVALRSG--ADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYG--TIDFIFGN 402 (560)
Q Consensus 334 -~~f~~~~lt~~Nt-----~g~~~~qAvAl~~~--~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G--~vDfIfG~ 402 (560)
+++++++++|++. ......+-.+|++. +|++.+.+|+|.+....+|++.... -.+++.|.+ +-=-.||.
T Consensus 135 ~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~ 214 (410)
T 2inu_A 135 LSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVELTGA 214 (410)
T ss_dssp EECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEESSSEEEEECSC
T ss_pred cCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEEecCCceeeccc
Confidence 5555555555554 54445677888886 7899999999999999999997632 355666652 11123553
Q ss_pred c-eEEEeeeEEEEe
Q 044042 403 A-AVVLQNCNIYLR 415 (560)
Q Consensus 403 ~-~a~f~~c~i~~~ 415 (560)
+ ...++++.+...
T Consensus 215 ~~~~~I~~N~i~~~ 228 (410)
T 2inu_A 215 GQATIVSGNHMGAG 228 (410)
T ss_dssp EESCEEESCEEECC
T ss_pred cccceEecceeeec
Confidence 2 345667777643
No 12
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.31 E-value=1e-05 Score=84.57 Aligned_cols=148 Identities=16% Similarity=0.206 Sum_probs=83.9
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE---------EEEEeecCCceEEEecCCCceEEecccccc-------
Q 044042 255 KFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQE---------YISIAKNKKILMMIGDGIGKTIITGDRNFV------- 318 (560)
Q Consensus 255 ~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E---------~v~I~~~~~~itl~G~g~~~tiI~~~~~~~------- 318 (560)
+-..||+||++|.+. +..+|+|.||+|.. .+.+++ +|+|+|+|+++++|.......
T Consensus 18 dt~aiq~Ai~~a~~~-----gg~~v~~p~G~y~~~~~~~~~~g~l~~~~---~v~l~g~g~~~t~l~~~~~~~~~~~~~~ 89 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA-----GGGTVYLPAGEYRVSAAGEPGDGCLMLKD---GVYLAGAGMGETVIKLIDGSDQKITGMV 89 (377)
T ss_dssp CHHHHHHHHHHHHHT-----TSEEEEECSEEEEECCCSSGGGCSEECCT---TEEEEESSBTTEEEEECTTCBSCEEEEE
T ss_pred hHHHHHHHHHHHHhc-----CCCEEEECCeEEEEcccccCCcccEEecC---CeEEEEcCCCCcEEEecCCCccCccceE
Confidence 356899999999752 12799999999996 577753 899999998888876432110
Q ss_pred -CCccc----cccceEEE------------------------EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEc
Q 044042 319 -DGWTT----FNSATFAV------------------------MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSC 369 (560)
Q Consensus 319 -~g~~t----~~sat~~v------------------------~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c 369 (560)
..++. +.-.-|.| .++++++++++|+|..+. .+-+.-..+...+.||
T Consensus 90 ~~~~g~~~~~~~~~~~~I~G~~~~~~G~idGw~~~~~~~~~~~~~nv~I~~~~i~n~~~~----gi~~~~~~~~~~i~n~ 165 (377)
T 2pyg_A 90 RSAYGEETSNFGMRDLTLDGNRDNTSGKVDGWFNGYIPGGDGADRDVTIERVEVREMSGY----GFDPHEQTINLTIRDS 165 (377)
T ss_dssp ECCTTSCCEEEEEEEEEEECCGGGCBSCEEEEEECSCTTSSCCEEEEEEEEEEEECCSSC----SEEECSSEEEEEEESC
T ss_pred eccCCCcceEEEEEEEEEECCCccCCccccceecccCccccccccceEEEeEEEEecccc----eEEeecccCCeEEEeE
Confidence 00000 00000111 234567777777776432 2233222345666666
Q ss_pred eeccc-cceeeecCc-ceeeeccEEEc-c---eeeeeccceEEEeeeEEEE
Q 044042 370 SFEGY-QDSLYTHSQ-RQFYRECDIYG-T---IDFIFGNAAVVLQNCNIYL 414 (560)
Q Consensus 370 ~~~g~-QDTL~~~~~-r~~~~~c~I~G-~---vDfIfG~~~a~f~~c~i~~ 414 (560)
.+.+. .|.+|++.. ...+++|++.. . +++.+|.....+++|.+..
T Consensus 166 ~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~ 216 (377)
T 2pyg_A 166 VAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG 216 (377)
T ss_dssp EEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES
T ss_pred EeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC
Confidence 66433 566666543 22345554332 1 3344445566777777763
No 13
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.01 E-value=0.00026 Score=79.54 Aligned_cols=139 Identities=17% Similarity=0.269 Sum_probs=91.7
Q ss_pred ccHHHHHHhCCCCCC----CCCceEEEEEeCcEEe--EEEEEeecCCceEEEecCCCceEEeccccccC-----C--cc-
Q 044042 257 STINDAITAAPNNTD----VTDGYFLIYIKEGVYQ--EYISIAKNKKILMMIGDGIGKTIITGDRNFVD-----G--WT- 322 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~----~~~~~~~I~I~~G~Y~--E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~-----g--~~- 322 (560)
..||+||+++..... ....+.+|||.+|+|. ..|.++. ++.|+|++.+.++|....+..+ + +.
T Consensus 67 ~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~---~t~L~G~~~~~pvIka~~~F~G~~li~~d~y~~ 143 (758)
T 3eqn_A 67 AAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLY---QTQLIGDAKNLPTLLAAPNFSGIALIDADPYLA 143 (758)
T ss_dssp HHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCT---TEEEEECSSSCCEEEECTTCCSSCSEESSCBCG
T ss_pred HHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccC---CeEEEecCCCCCeEecCCCCCCcceeeccccCC
Confidence 579999999854210 0234579999999998 4688764 8999999998888866543211 0 00
Q ss_pred ----cc-ccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecC-CCeEEEEEceecc-----c-cceeeecCc-ceeeec
Q 044042 323 ----TF-NSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSG-ADLSTFYSCSFEG-----Y-QDSLYTHSQ-RQFYRE 389 (560)
Q Consensus 323 ----t~-~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~-~d~~~~~~c~~~g-----~-QDTL~~~~~-r~~~~~ 389 (560)
.+ ....| ...++||.|..+..+.. +.+|+.. +....+.||.|.. . |+.|+...+ --|..|
T Consensus 144 ~G~~w~~~~~~F-----~r~irNlviD~t~~~~~--~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~D 216 (758)
T 3eqn_A 144 GGAQYYVNQNNF-----FRSVRNFVIDLRQVSGS--ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGD 216 (758)
T ss_dssp GGCBSSCGGGCC-----CEEEEEEEEECTTCSSC--EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEE
T ss_pred CCccccccccce-----eeeecceEEeccccCCC--ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEe
Confidence 00 01111 24678888887766543 7777764 6778888888885 3 778887653 457778
Q ss_pred cEEE-cceeeeeccceE
Q 044042 390 CDIY-GTIDFIFGNAAV 405 (560)
Q Consensus 390 c~I~-G~vDfIfG~~~a 405 (560)
|+|. |.+-+.+|+-.-
T Consensus 217 l~f~GG~~G~~~gnQQf 233 (758)
T 3eqn_A 217 LVFNGGNIGATFGNQQF 233 (758)
T ss_dssp EEEESCSEEEEEECSCC
T ss_pred eEEeCCceEEEcCCcce
Confidence 8887 466666676443
No 14
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.59 E-value=0.0023 Score=67.13 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=71.5
Q ss_pred ceEEEE-eCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceecc-----ccceeeecC-cceeeeccEEEcceeee
Q 044042 327 ATFAVM-APNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEG-----YQDSLYTHS-QRQFYRECDIYGTIDFI 399 (560)
Q Consensus 327 at~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g-----~QDTL~~~~-~r~~~~~c~I~G~vDfI 399 (560)
..|.+. .++++++||+|+|+... .+-+ ...+.+.+.++++.+ +-|.+-+.+ .....++|+|...-|-|
T Consensus 152 ~~i~~~~~~nv~I~~iti~nsp~~----~i~~-~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcI 226 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINSPNF----HVVF-SDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNV 226 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECCSSC----SEEE-ESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSE
T ss_pred eEEEEEcceEEEEEeEEEECCCcE----EEEE-eCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeE
Confidence 345554 66899999999998531 1222 357889999999987 467777665 34567899998666644
Q ss_pred e--------ccceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeecc
Q 044042 400 F--------GNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 400 f--------G~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 450 (560)
. +....+++||.+.. + .| |.. |.... .-..+.|.||+|....
T Consensus 227 aiks~~~~~~s~nI~I~n~~~~~-----g-hG-isi-GSe~~-~v~nV~v~n~~~~~t~ 276 (376)
T 1bhe_A 227 AIKAYKGRAETRNISILHNDFGT-----G-HG-MSI-GSETM-GVYNVTVDDLKMNGTT 276 (376)
T ss_dssp EEEECTTSCCEEEEEEEEEEECS-----S-SC-EEE-EEEES-SEEEEEEEEEEEESCS
T ss_pred EEcccCCCCCceEEEEEeeEEEc-----c-cc-EEe-ccCCc-cEeeEEEEeeEEeCCC
Confidence 3 23457888888763 1 12 222 22111 3457889999998764
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.50 E-value=0.005 Score=67.97 Aligned_cols=171 Identities=18% Similarity=0.203 Sum_probs=102.2
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE--EEEEeecCCceEEEecCCCceEEeccccc-----------------
Q 044042 257 STINDAITAAPNNTDVTDGYFLIYIKEGVYQE--YISIAKNKKILMMIGDGIGKTIITGDRNF----------------- 317 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~itl~G~g~~~tiI~~~~~~----------------- 317 (560)
..||+||++. -+|+|.+|+|.= .|.++. +++|.|++...++|.+....
T Consensus 40 ~Aiq~Ai~~G----------g~V~iP~GtYlis~~l~l~s---nv~L~g~g~~~t~L~~~~~~p~~~~li~~lI~a~~~~ 106 (609)
T 3gq8_A 40 RAFEKAIESG----------FPVYVPYGTFMVSRGIKLPS---NTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGNE 106 (609)
T ss_dssp HHHHHHHHTS----------SCEEECSEEEEESSCEEECS---SEEEEESCTTTEEEEECTTCCSSCCSEEESCTTTCCE
T ss_pred HHHHHHHHcC----------CEEEECCccEEEeCceEECC---CcEEEEeeCCCCEEEeCCCCCCCCceeeeeeeecccc
Confidence 4699999963 269999999984 577753 89999998666666543210
Q ss_pred --------cCC----cc-------ccccceEEE-EeCcEEEEEeeEeeCCCCC------------CCceeeeecCCCeEE
Q 044042 318 --------VDG----WT-------TFNSATFAV-MAPNFVAVDISFRNTAGPS------------KHQAVALRSGADLST 365 (560)
Q Consensus 318 --------~~g----~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~------------~~qAvAl~~~~d~~~ 365 (560)
.|| ++ ..+...|.+ ..++++++||+|+|+.... ..+.+.+.+.+.++.
T Consensus 107 NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~ 186 (609)
T 3gq8_A 107 NIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIW 186 (609)
T ss_dssp EEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEE
T ss_pred cEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEE
Confidence 122 00 011122333 3457999999999985410 001111222257899
Q ss_pred EEEceeccc-cceeeecCc-ceeeeccEEEcc------eeeeecc--ceEEEeeeEEEEecCCCCCce-EEEecCCCCCC
Q 044042 366 FYSCSFEGY-QDSLYTHSQ-RQFYRECDIYGT------IDFIFGN--AAVVLQNCNIYLRLPMSGQYN-VITAQGRTDPN 434 (560)
Q Consensus 366 ~~~c~~~g~-QDTL~~~~~-r~~~~~c~I~G~------vDfIfG~--~~a~f~~c~i~~~~~~~~~~~-~itA~gr~~~~ 434 (560)
++||.|.+. -|-+.+++. .-.+++|+++|. --+-+|. ....|+||.+..- ..| .|-++++ ..
T Consensus 187 I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt-----~~GIrIKt~~~--~~ 259 (609)
T 3gq8_A 187 IENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGC-----YGGIEIKAHGD--AP 259 (609)
T ss_dssp EESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESS-----SEEEEEEECTT--SC
T ss_pred EEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECC-----CCEEEEEecCC--CC
Confidence 999999765 456666654 347899999543 2333444 3678999998731 122 2444432 23
Q ss_pred CCceEEEeeeEEe
Q 044042 435 QNTGISIHNCTFR 447 (560)
Q Consensus 435 ~~~G~vf~~c~i~ 447 (560)
....+.|.+|...
T Consensus 260 ~v~NV~I~n~vs~ 272 (609)
T 3gq8_A 260 AAYNISINGHMSV 272 (609)
T ss_dssp CCEEEEEEEEEEE
T ss_pred ccccEEEECCEee
Confidence 4566777777554
No 16
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.36 E-value=0.0017 Score=67.48 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=68.0
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEeCcEEe--EEEEEeecCCceEEEecCCCceEEeccccccCCccccccceEEE-Ee
Q 044042 257 STINDAITAAPNNTDVTDGYFLIYIKEGVYQ--EYISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAV-MA 333 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~--E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~ 333 (560)
-|+++||.+..+. .+|+...|+++ +.|.|.+ ++||.|.|. ..+|.|.. ..+.+ .+
T Consensus 56 GsLr~av~~~~P~-------~Ivf~~~g~I~l~~~l~V~s---n~TI~G~ga-~~~i~G~G-----------~gi~i~~a 113 (346)
T 1pxz_A 56 GTLRYGATREKAL-------WIIFSQNMNIKLKMPLYVAG---HKTIDGRGA-DVHLGNGG-----------PCLFMRKV 113 (346)
T ss_dssp TSHHHHHHCSSCE-------EEEESSCEEECCSSCEECCS---SEEEECTTS-CEEEETTS-----------CCEEEESC
T ss_pred chhHHHhccCCCe-------EEEEcCCcEEecCccEEecC---CeEEEccCC-ceEEeCCc-----------ceEEEEcc
Confidence 3899999885443 77777889997 6788854 899999875 45677631 22333 47
Q ss_pred CcEEEEEeeEeeCCCC------------------CCCceeeeecCCCeEEEEEceeccccceee
Q 044042 334 PNFVAVDISFRNTAGP------------------SKHQAVALRSGADLSTFYSCSFEGYQDSLY 379 (560)
Q Consensus 334 ~~f~~~~lt~~Nt~g~------------------~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~ 379 (560)
++++++||+|++.... ....|+-+. .+.++.+.+|.|....|.++
T Consensus 114 ~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~Dg~i 176 (346)
T 1pxz_A 114 SHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLI 176 (346)
T ss_dssp EEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSSEEE
T ss_pred CCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCCCcE
Confidence 8999999999986310 122333333 45777788888877666553
No 17
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.35 E-value=0.0027 Score=66.04 Aligned_cols=201 Identities=14% Similarity=0.167 Sum_probs=111.3
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEE-EEeecCCceEEEecCC------------------CceEEecc-
Q 044042 255 KFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYI-SIAKNKKILMMIGDGI------------------GKTIITGD- 314 (560)
Q Consensus 255 ~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~itl~G~g~------------------~~tiI~~~- 314 (560)
+...||+|++++... +..+|+|.+|+|.. + .+. .+++|..+|. ..+.|+|.
T Consensus 7 ~t~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l~---~~~~l~~~g~~~~~~~~w~~g~~i~~~~~ni~I~G~~ 77 (349)
T 1hg8_A 7 EYSGLATAVSSCKNI-----VLNGFQVPTGKQLD-LSSLQ---NDSTVTFKGTTTFATTADNDFNPIVISGSNITITGAS 77 (349)
T ss_dssp SGGGHHHHHHHCSEE-----EECCCEECTTCCEE-ETTCC---TTCEEEECSEEEECCCCCTTCCSEEEEEESCEEEECT
T ss_pred CHHHHHHHHHhcccc-----CCCEEEECCCEEEE-eeccC---CCeEEEEcCceecccccccCCceEEEECccEEEEecC
Confidence 356799999998752 12478899998864 2 111 1333333220 12333342
Q ss_pred ccccCCcc------------c-cccceEEE-E--eCcEEEEEeeEeeCCCCCCCceeeeec-CCCeEEEEEceeccc---
Q 044042 315 RNFVDGWT------------T-FNSATFAV-M--APNFVAVDISFRNTAGPSKHQAVALRS-GADLSTFYSCSFEGY--- 374 (560)
Q Consensus 315 ~~~~~g~~------------t-~~sat~~v-~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~--- 374 (560)
....||.+ . .+.-.|.+ . .++++++||+|+|+.. -.+.+ .++++.+.++.+.+.
T Consensus 78 ~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~------~~i~i~~~~nv~i~~~~I~~~~~~ 151 (349)
T 1hg8_A 78 GHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV------HCFDITGSSQLTISGLILDNRAGD 151 (349)
T ss_dssp TCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS------EEEEEESCEEEEEEEEEEECGGGS
T ss_pred CCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC------ceEEEeccCCEEEEEEEEECCCCc
Confidence 11112211 1 23335667 5 4489999999999852 23443 478899999999864
Q ss_pred --------------cceeeecC-cceeeeccEEEcceeee-ecc-ceEEEeeeEEEEecCCCCCceEEEe--cCCCCCCC
Q 044042 375 --------------QDSLYTHS-QRQFYRECDIYGTIDFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITA--QGRTDPNQ 435 (560)
Q Consensus 375 --------------QDTL~~~~-~r~~~~~c~I~G~vDfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~ 435 (560)
-|.+.+.. .....++|+|...-|-| ++. ...+|+||.+.. + .| |.. -|+.+...
T Consensus 152 ~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~-----g-hG-isiGS~G~~~~~~ 224 (349)
T 1hg8_A 152 KPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSG-----G-HG-LSIGSVGGKSDNV 224 (349)
T ss_dssp SCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEES-----S-CC-EEEEEESSSSCCE
T ss_pred cccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeC-----C-cc-eEEccccccccCC
Confidence 34555544 34567899997544432 222 456789998763 1 12 322 12223334
Q ss_pred CceEEEeeeEEeeccccccccCcceEEeeccCCCCCcEEEeccCCCC
Q 044042 436 NTGISIHNCTFRAADELALSNQTVQTYLGRPWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 436 ~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~ 482 (560)
-..+.|+||+|.....-. ..+++-|| ...-..+.|-+-.|.+
T Consensus 225 v~nV~v~n~~~~~~~~Gi----rIKt~~g~-~G~v~nI~~~ni~~~~ 266 (349)
T 1hg8_A 225 VDGVQFLSSQVVNSQNGC----RIKSNSGA-TGTINNVTYQNIALTN 266 (349)
T ss_dssp EEEEEEEEEEEEEEEEEE----EEEEETTC-CEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEECCCcEE----EEEecCCC-CccccceEEEEEEEEc
Confidence 567889999998754210 11233333 1224456666666554
No 18
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.32 E-value=0.0024 Score=66.05 Aligned_cols=200 Identities=13% Similarity=0.088 Sum_probs=111.6
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEE-EEeecCCceEEEecCC-----------------CceEEeccc-c
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYI-SIAKNKKILMMIGDGI-----------------GKTIITGDR-N 316 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~itl~G~g~-----------------~~tiI~~~~-~ 316 (560)
...||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----~g~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~gG 78 (339)
T 2iq7_A 8 AAAAIKGKASCTSI-----ILNGIVVPAGTTLD-MTGL---KSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASGH 78 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCCC
Confidence 45799999998752 12578899999874 2 22 12344443320 223333321 1
Q ss_pred ccCCcc------------ccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeec-CCCeEEEEEceeccc--------
Q 044042 317 FVDGWT------------TFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRS-GADLSTFYSCSFEGY-------- 374 (560)
Q Consensus 317 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~-------- 374 (560)
..||.+ ..+...|.+ ..++++++||+|+|+.. . .+.+ ..+++.+.+|.+.+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~--~i~i~~~~nv~i~~~~I~~~~~d~~~~~ 152 (339)
T 2iq7_A 79 SIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----Q--AFSINSATTLGVYDVIIDNSAGDSAGGH 152 (339)
T ss_dssp EEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----C--CEEEESCEEEEEESCEEECGGGGGTTCC
T ss_pred EEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----c--eEEEeccCCEEEEEEEEECCccccccCC
Confidence 122211 112334555 57789999999999853 2 2333 478899999999875
Q ss_pred -cceeeecC-cceeeeccEEEcceeee-ecc-ceEEEeeeEEEEecCCCCCceEEEe--cCCCCCCCCceEEEeeeEEee
Q 044042 375 -QDSLYTHS-QRQFYRECDIYGTIDFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITA--QGRTDPNQNTGISIHNCTFRA 448 (560)
Q Consensus 375 -QDTL~~~~-~r~~~~~c~I~G~vDfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~ 448 (560)
-|.+.+.. .....++|+|...-|-| ++. ...+|+||.+..- .| |.. .|+.....-..+.|+||++..
T Consensus 153 ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~g------hG-isiGSlg~~~~~~v~nV~v~n~~~~~ 225 (339)
T 2iq7_A 153 NTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGG------HG-LSIGSVGGRSDNTVKTVTISNSKIVN 225 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------CC-EEEEEESSSSCCEEEEEEEEEEEEES
T ss_pred CCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECC------ce-EEECcCCcccCCCEEEEEEEeeEEEC
Confidence 34565554 34467888887443422 232 4567888887631 12 222 122233345677899999976
Q ss_pred ccccccccCcceEEeeccCCCCCcEEEeccCCCC
Q 044042 449 ADELALSNQTVQTYLGRPWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 449 ~~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~ 482 (560)
...-. ..+++-||+ ..-..++|-+-.|.+
T Consensus 226 ~~~gi----rIkt~~g~~-G~v~nI~~~ni~~~~ 254 (339)
T 2iq7_A 226 SDNGV----RIKTVSGAT-GSVSGVTYSGITLSN 254 (339)
T ss_dssp CSEEE----EEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred CCcEE----EEEEeCCCC-eEEEEEEEEeEEccC
Confidence 54210 123333431 234556666666654
No 19
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.24 E-value=0.01 Score=66.84 Aligned_cols=144 Identities=17% Similarity=0.218 Sum_probs=87.8
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE--EEEEeecCCceEEEecCCCceEEecccc------------------
Q 044042 257 STINDAITAAPNNTDVTDGYFLIYIKEGVYQE--YISIAKNKKILMMIGDGIGKTIITGDRN------------------ 316 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~itl~G~g~~~tiI~~~~~------------------ 316 (560)
..||+||++. -+|+|.+|+|.= .|.++. +++|.|++...++|.....
T Consensus 40 ~Aiq~Ai~aG----------g~V~IPaGtYlisg~I~L~s---nv~L~Geg~~~t~Lk~~~d~p~~~~li~~lI~a~gve 106 (772)
T 3gqn_A 40 RAFEKAIESG----------FPVYVPYGTFMVSRGIKLPS---NTVLTGAGKRNAVIRFMDSVGRGESLMYNENVTTGNE 106 (772)
T ss_dssp HHHHHHHHTT----------SCEEECSEEEEESSCEEECS---SCEEEEEEEEEEEEEECTTCCSSCCSEEESCTTTCCE
T ss_pred HHHHHHHHcC----------CEEEECCccEEEEeEEEECC---CcEEEEecCCCCEEEeCCCCCCCCceeeeeeeccCce
Confidence 4799999963 269999999984 577753 7888888754455543211
Q ss_pred -------ccCCc----c-------ccccceEEE-EeCcEEEEEeeEeeCCCCC------------CCceeeeecCCCeEE
Q 044042 317 -------FVDGW----T-------TFNSATFAV-MAPNFVAVDISFRNTAGPS------------KHQAVALRSGADLST 365 (560)
Q Consensus 317 -------~~~g~----~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~------------~~qAvAl~~~~d~~~ 365 (560)
..||- + ..+...|.+ ..++++++||+|.|+.... ..+.+.+.+.+.++.
T Consensus 107 NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~ 186 (772)
T 3gqn_A 107 NIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIW 186 (772)
T ss_dssp EEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEE
T ss_pred eEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEE
Confidence 01220 0 011122333 4557999999999985410 011111222357899
Q ss_pred EEEceecccc-ceeeecCc-ceeeeccEEEcc------eeeeecc--ceEEEeeeEEE
Q 044042 366 FYSCSFEGYQ-DSLYTHSQ-RQFYRECDIYGT------IDFIFGN--AAVVLQNCNIY 413 (560)
Q Consensus 366 ~~~c~~~g~Q-DTL~~~~~-r~~~~~c~I~G~------vDfIfG~--~~a~f~~c~i~ 413 (560)
+.||.|.+.+ |-+.+++. .-.+++|++.|. --+-+|. ....|+||.+.
T Consensus 187 I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~ 244 (772)
T 3gqn_A 187 IENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (772)
T ss_dssp EESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEE
T ss_pred EEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEE
Confidence 9999997754 45666654 347899999542 2333444 36789999986
No 20
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.17 E-value=0.0073 Score=64.34 Aligned_cols=143 Identities=14% Similarity=0.249 Sum_probs=86.0
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE--EEEEeecCCceEEEecCC-------Cc---eEEeccc---------
Q 044042 257 STINDAITAAPNNTDVTDGYFLIYIKEGVYQE--YISIAKNKKILMMIGDGI-------GK---TIITGDR--------- 315 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E--~v~I~~~~~~itl~G~g~-------~~---tiI~~~~--------- 315 (560)
..||+||+++..+ .+|+|.+|+|.- .|.+.. ..+++|..+|. .. .++....
T Consensus 38 ~Aiq~Ai~ac~~g-------~~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G~~l~~~~~~~~~~~~~~~~~~~~i~i~G~ 109 (422)
T 1rmg_A 38 PAITSAWAACKSG-------GLVYIPSGNYALNTWVTLTG-GSATAIQLDGIIYRTGTASGNMIAVTDTTDFELFSSTSK 109 (422)
T ss_dssp HHHHHHHHHHTBT-------CEEEECSSEEEECSCEEEES-CEEEEEEECSEEEECCCCSSEEEEEEEEEEEEEECSSSC
T ss_pred HHHHHHHHHCCCC-------CEEEECCCeEEeCCceeecC-CCeEEEEEcCcEEcccCCCCceEEEEecCceeEEeeccC
Confidence 4799999988644 589999999984 266652 23566665541 00 0011110
Q ss_pred cccCCcc-------ccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeec-CCCeEEEEEceecc----ccceeeecC
Q 044042 316 NFVDGWT-------TFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRS-GADLSTFYSCSFEG----YQDSLYTHS 382 (560)
Q Consensus 316 ~~~~g~~-------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g----~QDTL~~~~ 382 (560)
...||.+ .++...|.+ ..++++++||+|+|+... .+.+ .++++.++||.|.+ .-|.+.+..
T Consensus 110 G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~------~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~ 183 (422)
T 1rmg_A 110 GAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAPAF------HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG 183 (422)
T ss_dssp CEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCSSC------SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE
T ss_pred EEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCCce------EEEEeCcCCEEEEeEEEECCCCCCCccEeecC
Confidence 0112211 113344444 477899999999997431 3333 35778888888886 567777766
Q ss_pred cceeeeccEEEcceeeee---ccceEEEeeeEEE
Q 044042 383 QRQFYRECDIYGTIDFIF---GNAAVVLQNCNIY 413 (560)
Q Consensus 383 ~r~~~~~c~I~G~vDfIf---G~~~a~f~~c~i~ 413 (560)
.....++|+|...-|-|. |....+++||.+.
T Consensus 184 ~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~ 217 (422)
T 1rmg_A 184 SNIWVHDVEVTNKDECVTVKSPANNILVESIYCN 217 (422)
T ss_dssp EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEE
T ss_pred CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEc
Confidence 333568888875555332 3456778888754
No 21
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.17 E-value=0.0032 Score=65.09 Aligned_cols=201 Identities=12% Similarity=0.140 Sum_probs=113.4
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEE-EEeecCCceEEEecCC-----------------CceEEeccc-c
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYI-SIAKNKKILMMIGDGI-----------------GKTIITGDR-N 316 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~itl~G~g~-----------------~~tiI~~~~-~ 316 (560)
...||+|++++... +.-+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 8 t~aiq~ai~~c~~~-----gg~~v~vP~G~~~~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 78 (336)
T 1nhc_A 8 ASEASESISSCSDV-----VLSSIEVPAGETLD-LSDA---ADGSTITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGA 78 (336)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-CTTC---CTTCEEEEESEEEECCCCSCCCSEECCEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeceEEcccccccCcEEEEecCCEEEEcCCCe
Confidence 45799999988652 12578888898863 2 12 12444443320 223334431 1
Q ss_pred ccCCcc------------ccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccc---------
Q 044042 317 FVDGWT------------TFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGY--------- 374 (560)
Q Consensus 317 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~--------- 374 (560)
..||.+ ..+...|.+ ..++++++||+|+|+.. ..+-+. ++++.+.+|.+.+.
T Consensus 79 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~n 152 (336)
T 1nhc_A 79 VIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ--ATNVHLNDFTIDNSDGDDNGGHN 152 (336)
T ss_dssp EEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE--EEEEEEESCEEECTTHHHHTCCS
T ss_pred EEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE--eCCEEEEEEEEECCCcccccCCC
Confidence 122211 112234555 57789999999999853 235554 88899999999874
Q ss_pred cceeeecC-cceeeeccEEEcceeee-ecc-ceEEEeeeEEEEecCCCCCceEEEe--cCCCCCCCCceEEEeeeEEeec
Q 044042 375 QDSLYTHS-QRQFYRECDIYGTIDFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITA--QGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 375 QDTL~~~~-~r~~~~~c~I~G~vDfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
-|.+.+.. .....++|+|...-|-| ++. ...+++||.+.. + .| |.. .|......-..+.|+||++...
T Consensus 153 tDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~-----g-hG-isiGS~g~~~~~~v~nV~v~n~~~~~t 225 (336)
T 1nhc_A 153 TDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSG-----G-HG-LSIGSVGGRDDNTVKNVTISDSTVSNS 225 (336)
T ss_dssp CCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEES-----S-SE-EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred CCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEEC-----C-cC-ceEccCccccCCCEEEEEEEeeEEECC
Confidence 45666654 34567899997544432 232 456788888763 1 23 332 1222233456788999999875
Q ss_pred cccccccCcceEEeeccCCCCCcEEEeccCCCCc
Q 044042 450 DELALSNQTVQTYLGRPWKEYSRTVIMQSFMDSL 483 (560)
Q Consensus 450 ~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~~ 483 (560)
..-. ..+++-||. .....++|-+-.|.++
T Consensus 226 ~~gi----rIkt~~g~~-G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 226 ANGV----RIKTIYKET-GDVSEITYSNIQLSGI 254 (336)
T ss_dssp SEEE----EEEEETTCC-CEEEEEEEEEEEEEEE
T ss_pred CcEE----EEEEECCCC-CEEeeeEEeeEEeecc
Confidence 4210 123333331 2245566666666543
No 22
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.14 E-value=0.0042 Score=64.92 Aligned_cols=200 Identities=12% Similarity=0.092 Sum_probs=114.7
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEE-EEeecCCceEEEecCC-----------------CceEEecc-cc
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYI-SIAKNKKILMMIGDGI-----------------GKTIITGD-RN 316 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~itl~G~g~-----------------~~tiI~~~-~~ 316 (560)
+..||+|++++... +.-+|+|.+|+|.. + .+. .+++|..+|. +.+.|+|. ..
T Consensus 35 ~~aiq~ai~~c~~~-----~g~~v~vP~G~~l~-l~~l~---~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~~g 105 (362)
T 1czf_A 35 AAAAKAGKAKCSTI-----TLNNIEVPAGTTLD-LTGLT---SGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASGH 105 (362)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSCC---TTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred HHHHHHHHHHhhcc-----CCCEEEECCCEEEE-eeccC---CCeEEEEeCcEEeccccCCCcEEEEeCccEEEEcCCCc
Confidence 56899999999642 22578999999863 2 221 1344443331 23334442 11
Q ss_pred ccCCcc-----------ccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccc---------c
Q 044042 317 FVDGWT-----------TFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGY---------Q 375 (560)
Q Consensus 317 ~~~g~~-----------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~---------Q 375 (560)
..||.+ ..+...+.+ ..++++++||+++|+.. ..+-+. .+++.+.+|.+.+. -
T Consensus 106 ~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~Nt 179 (362)
T 1czf_A 106 LINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ--ANDITFTDVTINNADGDTQGGHNT 179 (362)
T ss_dssp EEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE--CSSEEEESCEEECGGGGTTTCCSC
T ss_pred EEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe--eCCEEEEEEEEECCccccccCCCC
Confidence 122211 112223444 46789999999999843 235554 88999999999874 4
Q ss_pred ceeeecC-cceeeeccEEEcceeee-ecc-ceEEEeeeEEEEecCCCCCceEEEe--cCCCCCCCCceEEEeeeEEeecc
Q 044042 376 DSLYTHS-QRQFYRECDIYGTIDFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITA--QGRTDPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 376 DTL~~~~-~r~~~~~c~I~G~vDfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~~ 450 (560)
|.+...+ .....++|+|...-|-| ++. ...+|+||.+... .| |.. .|+.+...-..+.|+||++....
T Consensus 180 DGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~G~~~~~~v~nV~v~n~~~~~t~ 252 (362)
T 1czf_A 180 DAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGG------HG-LSIGSVGDRSNNVVKNVTIEHSTVSNSE 252 (362)
T ss_dssp CSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------CC-EEEEEECSSSCCEEEEEEEEEEEEEEEE
T ss_pred CceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCC------ce-eEEeeccccCCCCEEEEEEEeeEEECCc
Confidence 5566654 34468899998655533 333 4578899988741 12 222 13223344557789999998754
Q ss_pred ccccccCcceEEeeccCCCCCcEEEeccCCCC
Q 044042 451 ELALSNQTVQTYLGRPWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 451 ~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~ 482 (560)
... ..+++-||+ +.-..+.|-+-.|.+
T Consensus 253 ~Gi----rIKt~~g~~-G~v~nI~~~ni~~~~ 279 (362)
T 1czf_A 253 NAV----RIKTISGAT-GSVSEITYSNIVMSG 279 (362)
T ss_dssp EEE----EEEEETTCC-EEEEEEEEEEEEEEE
T ss_pred eEE----EEEEeCCCC-ceEeeEEEEeEEEEC
Confidence 211 123443432 223455565555543
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.13 E-value=0.0036 Score=64.80 Aligned_cols=201 Identities=14% Similarity=0.147 Sum_probs=111.8
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEeEEE-EEeecCCceEEEecCC-----------------CceEEeccc-c
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQEYI-SIAKNKKILMMIGDGI-----------------GKTIITGDR-N 316 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E~v-~I~~~~~~itl~G~g~-----------------~~tiI~~~~-~ 316 (560)
+..||+|++++... +..+|+|.+|+|.. + .+ +.+++|.++|. +.+.|+|.. .
T Consensus 12 ~~aiq~ai~~c~~~-----gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG 82 (339)
T 1ia5_A 12 ASSASKSKTSCSTI-----VLSNVAVPSGTTLD-LTKL---NDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASGH 82 (339)
T ss_dssp HHHHHHHGGGCSEE-----EEESCEECTTCCEE-ECSC---CTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTC
T ss_pred hHHHHHHHHHhhcc-----CCCeEEECCCEEEE-eecc---CCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCCe
Confidence 56899999999752 22578999999863 2 22 22444444331 122333321 1
Q ss_pred ccCCcc------------ccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccc---------
Q 044042 317 FVDGWT------------TFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGY--------- 374 (560)
Q Consensus 317 ~~~g~~------------t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~--------- 374 (560)
..||.+ ..+...|.+ ..++++++||+|+|+.. ..+-+ ...+++.+.+|.+.+.
T Consensus 83 ~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i-~~~~nv~i~~~~I~~~~~d~~~~~n 157 (339)
T 1ia5_A 83 SINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSV-AGSDYLTLKDITIDNSDGDDNGGHN 157 (339)
T ss_dssp EEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEE-ESCEEEEEESCEEECGGGTTTTCCS
T ss_pred EEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEE-ecccCeEEeeEEEECCccccccCCC
Confidence 122211 112334555 57789999999999853 22332 2578899999999864
Q ss_pred cceeeecC-cceeeeccEEEcceeee-ecc-ceEEEeeeEEEEecCCCCCceEEEe--cCCCCCCCCceEEEeeeEEeec
Q 044042 375 QDSLYTHS-QRQFYRECDIYGTIDFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITA--QGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 375 QDTL~~~~-~r~~~~~c~I~G~vDfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA--~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
-|.+.+.. .....++|+|.-.-|-| ++. ...+|+||.+..- .| |.. .|......-..+.|.||+|...
T Consensus 158 tDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g------hG-isiGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 158 TDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGG------HG-LSIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp CCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESS------SC-EEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred CCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECC------ce-EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 44566654 34467888887544422 222 4567888887631 12 322 1222233455778999998875
Q ss_pred cccccccCcceEEeeccCCCCCcEEEeccCCCC
Q 044042 450 DELALSNQTVQTYLGRPWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 450 ~~~~~~~~~~~~yLGRpW~~~s~~v~~~s~~~~ 482 (560)
..-. ..+++-||+ .....++|-+-.|.+
T Consensus 231 ~~gi----rIKt~~g~~-G~v~nI~~~ni~~~~ 258 (339)
T 1ia5_A 231 DNGV----RIKTNIDTT-GSVSDVTYKDITLTS 258 (339)
T ss_dssp SEEE----EEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred CcEE----EEEEeCCCC-cEEEeeEEEEEEEEC
Confidence 4211 123333431 223455666655554
No 24
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.06 E-value=0.019 Score=61.77 Aligned_cols=178 Identities=12% Similarity=0.088 Sum_probs=95.8
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEe-EEEEEeecCCceEEEecC-------------------------CCce
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQ-EYISIAKNKKILMMIGDG-------------------------IGKT 309 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~-E~v~I~~~~~~itl~G~g-------------------------~~~t 309 (560)
=..||+||+++... .+.-+|+|.+|+|. ..|.++ .+++|..++ ....
T Consensus 39 T~Aiq~Aidac~~~----~ggg~V~vP~GtYl~g~I~lk---s~v~L~l~~GatL~~s~~td~~~y~~~~~~~~~~~~nI 111 (464)
T 1h80_A 39 SNALQRAINAISRK----PNGGTLLIPNGTYHFLGIQMK---SNVHIRVESDVIIKPTWNGDGKNHRLFEVGVNNIVRNF 111 (464)
T ss_dssp HHHHHHHHHHHHTS----TTCEEEEECSSEEEECSEECC---TTEEEEECTTCEEEECCCTTCSCEEEEEESSSSCEEEE
T ss_pred HHHHHHHHHHHhhc----cCCcEEEECCCeEEEeeEecc---CceEEEEcCCcEEEeccCCCcccCCceEeecccCccce
Confidence 45799999988431 01268999999995 244442 245555442 1111
Q ss_pred EEecccc--ccCCccc--cccceEEE-EeCcEEEEEeeEeeCCCCCCCcee--------eeecCCCeEEEEEceeccccc
Q 044042 310 IITGDRN--FVDGWTT--FNSATFAV-MAPNFVAVDISFRNTAGPSKHQAV--------ALRSGADLSTFYSCSFEGYQD 376 (560)
Q Consensus 310 iI~~~~~--~~~g~~t--~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAv--------Al~~~~d~~~~~~c~~~g~QD 376 (560)
.|+|... .-||.+. .+-..|.+ ...+++++||+|+|... -|... ++.+..+++.+.||.|.+.-|
T Consensus 112 tI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~--ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~gdd 189 (464)
T 1h80_A 112 SFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKT--IFASILVDVTERNGRLHWSRNGIIERIKQNNALF 189 (464)
T ss_dssp EEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSC--BSCSEEECEEEETTEEEEEEEEEEEEEEEESCCT
T ss_pred EEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccce--EeeceeeeeecCCCceeeccCEEEeceEEecCCC
Confidence 2222210 0111110 11122333 35689999999999542 12111 113356788999999998877
Q ss_pred eee-ec---CcceeeeccEEEcc--eeeeec-----c------ceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceE
Q 044042 377 SLY-TH---SQRQFYRECDIYGT--IDFIFG-----N------AAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGI 439 (560)
Q Consensus 377 TL~-~~---~~r~~~~~c~I~G~--vDfIfG-----~------~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~ 439 (560)
++- .+ .....+++|++.|. +.+--| . ....|+||++.... +.|.... .......+
T Consensus 190 giGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~------~~I~I~p--~~~~isnI 261 (464)
T 1h80_A 190 GYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGL------AAVMFGP--HFMKNGDV 261 (464)
T ss_dssp TCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSS------EEEEEEC--TTCBCCCE
T ss_pred eEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCc------eeEEEeC--CCceEeEE
Confidence 763 11 12447889997761 111111 1 23578888876432 2232221 11234678
Q ss_pred EEeeeEEeecc
Q 044042 440 SIHNCTFRAAD 450 (560)
Q Consensus 440 vf~~c~i~~~~ 450 (560)
.|+|.+.+...
T Consensus 262 tfeNI~~t~~~ 272 (464)
T 1h80_A 262 QVTNVSSVSCG 272 (464)
T ss_dssp EEEEEEEESSS
T ss_pred EEEEEEEEccc
Confidence 88888887643
No 25
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.04 E-value=0.0067 Score=67.61 Aligned_cols=109 Identities=15% Similarity=0.037 Sum_probs=60.7
Q ss_pred EEEE-eCcEEEEEeeEeeCCCCCCCceeeee-cCCCeEEEEEceecc----ccceeeecCc-ceeeeccEEEcceeee-e
Q 044042 329 FAVM-APNFVAVDISFRNTAGPSKHQAVALR-SGADLSTFYSCSFEG----YQDSLYTHSQ-RQFYRECDIYGTIDFI-F 400 (560)
Q Consensus 329 ~~v~-~~~f~~~~lt~~Nt~g~~~~qAvAl~-~~~d~~~~~~c~~~g----~QDTL~~~~~-r~~~~~c~I~G~vDfI-f 400 (560)
|.+. .+++.++||+|+|+..- .+. ...+.+.+.++.+.. +-|.+.+.+. ....++|+|.-.-|-| +
T Consensus 334 i~~~~~~nv~I~giti~ns~~~------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iai 407 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPAFH------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINF 407 (608)
T ss_dssp EEEESEEEEEEESCEEECCSSC------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeeeeEEEeCcEEecCCCC------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEe
Confidence 4443 67899999999997421 222 245667777777654 3566666543 3456777776544433 2
Q ss_pred --c----------cceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeecc
Q 044042 401 --G----------NAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 401 --G----------~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 450 (560)
| ....+++||.+... .|.+. -|......-..+.|.||+|.+..
T Consensus 408 ksg~~~~g~~~~~s~nI~I~n~~~~~g------hg~~~-iGS~~~~~v~nI~v~n~~~~~t~ 462 (608)
T 2uvf_A 408 AAGTGEKAQEQEPMKGAWLFNNYFRMG------HGAIV-TGSHTGAWIEDILAENNVMYLTD 462 (608)
T ss_dssp ECCCSGGGGGSCCEEEEEEESCEECSS------SCSEE-EESCCTTCEEEEEEESCEEESCS
T ss_pred cCCcCccccccccccCEEEEeEEEeCC------CCeEE-EcccCCCCEEEEEEEeEEEECCC
Confidence 1 13456777766521 12221 22222233345778888877653
No 26
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.04 E-value=0.0071 Score=64.93 Aligned_cols=143 Identities=7% Similarity=0.053 Sum_probs=89.4
Q ss_pred eEEE-EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceecc---ccceeeecCc-ceeeeccEEEcceeee-ec
Q 044042 328 TFAV-MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEG---YQDSLYTHSQ-RQFYRECDIYGTIDFI-FG 401 (560)
Q Consensus 328 t~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g---~QDTL~~~~~-r~~~~~c~I~G~vDfI-fG 401 (560)
.|.+ ...+++++||+|+|+... .+-+ ..++++.+.++.+.+ +-|.+-+.+. ....++|+|...-|=| +.
T Consensus 192 ~i~~~~~~nv~i~giti~nsp~~----~i~~-~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaik 266 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSPMW----CIHP-VLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIK 266 (448)
T ss_dssp SEEEESCEEEEEESCEEESCSSC----SEEE-ESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEB
T ss_pred EEEEEcccceEEEeeEEEeCCCc----eEee-eccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEec
Confidence 3444 467899999999998532 1222 357889999999986 5788877753 4568899998665633 22
Q ss_pred c-------------ceEEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeeccccccccCcceEEeeccCC
Q 044042 402 N-------------AAVVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYLGRPWK 468 (560)
Q Consensus 402 ~-------------~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~ 468 (560)
. ...+++||.+.... + .+.|.. |......-..+.|+||++.....-. ..+++-||. .
T Consensus 267 sg~~~dg~~~~~ps~nI~I~n~~~~~~~---g-h~gisi-GS~~~~~v~nV~v~n~~~~~t~~Gi----rIKt~~g~g-G 336 (448)
T 3jur_A 267 SGRDADGRRIGVPSEYILVRDNLVISQA---S-HGGLVI-GSEMSGGVRNVVARNNVYMNVERAL----RLKTNSRRG-G 336 (448)
T ss_dssp CCCHHHHHHHCCCEEEEEEESCEEECSS---C-SEEEEE-CSSCTTCEEEEEEESCEEESCSEEE----EEECCTTTC-S
T ss_pred cCccccccccCCCceeEEEEEeEEecCC---C-cceEEE-CCcccCcEEEEEEEEEEEecccceE----EEEEEcCCC-c
Confidence 2 35788999985421 2 234544 4433344567889999997653210 123334554 3
Q ss_pred CCCcEEEeccCCCCccC
Q 044042 469 EYSRTVIMQSFMDSLIN 485 (560)
Q Consensus 469 ~~s~~v~~~s~~~~~i~ 485 (560)
....+.|-+..|.++-.
T Consensus 337 ~v~nI~f~ni~m~~v~~ 353 (448)
T 3jur_A 337 YMENIFFIDNVAVNVSE 353 (448)
T ss_dssp EEEEEEEESCEEEEESS
T ss_pred eEeeEEEEEEEEECCcc
Confidence 34567777777766433
No 27
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.03 E-value=0.0058 Score=63.71 Aligned_cols=69 Identities=16% Similarity=0.081 Sum_probs=49.5
Q ss_pred eEEE--EeCcEEEEEeeEeeCCCC--CCCceeeeecCCCeEEEEEceeccccceeeec----CcceeeeccEEEccee
Q 044042 328 TFAV--MAPNFVAVDISFRNTAGP--SKHQAVALRSGADLSTFYSCSFEGYQDSLYTH----SQRQFYRECDIYGTID 397 (560)
Q Consensus 328 t~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~----~~r~~~~~c~I~G~vD 397 (560)
.|.| .+++++++||+|++.... ....++-+. .++++.+.+|.|....|-++.. +.+.-..+|+|.+.-|
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcc
Confidence 4777 578999999999986431 234556665 5789999999999888877631 2234467888887643
No 28
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.77 E-value=0.0072 Score=62.34 Aligned_cols=129 Identities=14% Similarity=0.163 Sum_probs=82.4
Q ss_pred ccHHHHHHhCCCCCCCCCceEEEEEeCcEEeE---------------EEEEeecCCceEEEecCCCceEEeccccccCCc
Q 044042 257 STINDAITAAPNNTDVTDGYFLIYIKEGVYQE---------------YISIAKNKKILMMIGDGIGKTIITGDRNFVDGW 321 (560)
Q Consensus 257 ~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~E---------------~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~ 321 (560)
..+++||+..+.. +|.+|.+ .|++.- .+.|.. ..++||+|... .|.
T Consensus 24 ~~L~~al~~~~~~-----~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v-~sn~TI~G~~a---~i~--------- 84 (330)
T 2qy1_A 24 EAMQSAIDSYSGS-----GGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN-KSDVTIKGANG---SAA--------- 84 (330)
T ss_dssp HHHHHHHHHSCSS-----SCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES-CCSEEEEECTT---CBB---------
T ss_pred HHHHHHHhccCCC-----CCEEEEE-ccEEecccccccccccccccceeEEEc-CCCeEEECCCc---EEe---------
Confidence 4688899875432 3467777 677652 123321 34777777542 122
Q ss_pred cccccceEEEE--eCcEEEEEeeEeeCCCCCCCceeeeec----CCCeEEEEEceeccccceeeecCcceeeeccEEEcc
Q 044042 322 TTFNSATFAVM--APNFVAVDISFRNTAGPSKHQAVALRS----GADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGT 395 (560)
Q Consensus 322 ~t~~sat~~v~--~~~f~~~~lt~~Nt~g~~~~qAvAl~~----~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~ 395 (560)
..-|.|. +++++++||+|++-.......|+-+.- .++++-+.+|.|..-.|. +...++++| .|.
T Consensus 85 ----g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~-~~~~~~~~~-----Dg~ 154 (330)
T 2qy1_A 85 ----NFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTK-CSGAGDASF-----DGG 154 (330)
T ss_dssp ----SSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCC-CTTCTTCSS-----CCS
T ss_pred ----eeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccc-cccCCccee-----ecc
Confidence 2346775 679999999999764322456666664 589999999999633221 123456665 466
Q ss_pred eeeeeccceEEEeeeEEEE
Q 044042 396 IDFIFGNAAVVLQNCNIYL 414 (560)
Q Consensus 396 vDfIfG~~~a~f~~c~i~~ 414 (560)
+|..-|.-...+++|.|+.
T Consensus 155 idi~~~s~~VTISnn~f~~ 173 (330)
T 2qy1_A 155 IDMKKGVHHVTVSYNYVYN 173 (330)
T ss_dssp EEEESSCEEEEEESCEEEE
T ss_pred cccccCcceEEEEcceecc
Confidence 7776667777889998863
No 29
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.74 E-value=0.0069 Score=63.14 Aligned_cols=89 Identities=19% Similarity=0.222 Sum_probs=61.1
Q ss_pred EEEeecCCceEEEecCCCceEEeccccccCCccccccceEEE--EeCcEEEEEeeEeeCCCC--CCCceeeeecCCCeEE
Q 044042 290 ISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAV--MAPNFVAVDISFRNTAGP--SKHQAVALRSGADLST 365 (560)
Q Consensus 290 v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v--~~~~f~~~~lt~~Nt~g~--~~~qAvAl~~~~d~~~ 365 (560)
|.|. .++||+|.|. ..+|.|. -|.| .+++++++||+|++.... .+..++-+. .++++.
T Consensus 104 l~v~---snkTI~G~G~-~~~i~G~-------------gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nVw 165 (359)
T 1idk_A 104 ITVT---SNKSLIGEGS-SGAIKGK-------------GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVW 165 (359)
T ss_dssp EEEC---SSEEEEECTT-TCEEESC-------------CEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEEE
T ss_pred EEeC---CCceEEEecC-CeEEecc-------------eEEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcEE
Confidence 5554 4889999875 3445542 3677 478999999999984211 234555554 479999
Q ss_pred EEEceeccccceeeec----CcceeeeccEEEcce
Q 044042 366 FYSCSFEGYQDSLYTH----SQRQFYRECDIYGTI 396 (560)
Q Consensus 366 ~~~c~~~g~QDTL~~~----~~r~~~~~c~I~G~v 396 (560)
+.+|.|...-|-++.. +.+.-..+|+|.|.-
T Consensus 166 IDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 166 IDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 9999999887877752 234456788887653
No 30
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.71 E-value=0.022 Score=59.14 Aligned_cols=136 Identities=11% Similarity=0.043 Sum_probs=83.6
Q ss_pred cccHHHHHHhCCCCCC-----CCCceEEEEEeCcEE------------------eEEEEEeecCCceEEEecCCCceEEe
Q 044042 256 FSTINDAITAAPNNTD-----VTDGYFLIYIKEGVY------------------QEYISIAKNKKILMMIGDGIGKTIIT 312 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~-----~~~~~~~I~I~~G~Y------------------~E~v~I~~~~~~itl~G~g~~~tiI~ 312 (560)
..++++||+++..+.. ...++.+|.| .|+- ...|.|.....++||+|.+. . |.
T Consensus 26 ~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~--~-~~ 101 (353)
T 1air_A 26 MQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG--S-SA 101 (353)
T ss_dssp HHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTT--C-CB
T ss_pred HHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccC--C-CC
Confidence 5689999988763210 1345677777 4552 24566753345888888641 1 11
Q ss_pred ccccccCCccccccceEEE-EeCcEEEEEeeEeeCCCC-CCCceeeeecCCCeEEEEEceeccccceeee-cCcceeeec
Q 044042 313 GDRNFVDGWTTFNSATFAV-MAPNFVAVDISFRNTAGP-SKHQAVALRSGADLSTFYSCSFEGYQDSLYT-HSQRQFYRE 389 (560)
Q Consensus 313 ~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~-~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~-~~~r~~~~~ 389 (560)
| ..|.| .+++++++||+|++..+. ....++-+. .++++-+.+|.|..-+|.... ..+++.|
T Consensus 102 g-------------~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~-- 165 (353)
T 1air_A 102 N-------------FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTF-- 165 (353)
T ss_dssp S-------------SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSS--
T ss_pred C-------------ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCCccccccccccccc--
Confidence 1 23455 468999999999975321 134555554 579999999999876543221 1122222
Q ss_pred cEEEcceeeeeccceEEEeeeEEEE
Q 044042 390 CDIYGTIDFIFGNAAVVLQNCNIYL 414 (560)
Q Consensus 390 c~I~G~vDfIfG~~~a~f~~c~i~~ 414 (560)
.|.+|+.-|.....+++|.|.-
T Consensus 166 ---DGl~di~~~s~~VTISnn~f~~ 187 (353)
T 1air_A 166 ---ESAVDIKGASNTVTVSYNYIHG 187 (353)
T ss_dssp ---CCSEEEESSCCEEEEESCEEEE
T ss_pred ---ccceeeecccCcEEEEeeEEcC
Confidence 2567777777777888888874
No 31
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.66 E-value=0.028 Score=57.77 Aligned_cols=141 Identities=15% Similarity=0.203 Sum_probs=83.9
Q ss_pred eEEEEcCCCCCCcccHHHHHHhCCCCCCCCCceEEEEEeCcEEe------EEEEEee------cCCceEEEecCCCceEE
Q 044042 244 KIVTVSQDGKAKFSTINDAITAAPNNTDVTDGYFLIYIKEGVYQ------EYISIAK------NKKILMMIGDGIGKTII 311 (560)
Q Consensus 244 ~~~~V~~dg~g~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~------E~v~I~~------~~~~itl~G~g~~~tiI 311 (560)
..++|.- ...+++||..-.... ..++|.+|.| .|+-. +.|.|.. ...++||+|.|.+ ..|
T Consensus 21 ~vv~Vtt-----l~dL~~Al~~~~~~~-~~~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~-~~i 92 (326)
T 3vmv_A 21 RVEYAST-----GAQIQQLIDNRSRSN-NPDEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN-GEF 92 (326)
T ss_dssp EEEEESS-----HHHHHHHHHHHHHSS-CTTSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC-CEE
T ss_pred eEEEECC-----HHHHHHHHhhccccc-CCCCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCCC-eEE
Confidence 3555653 234888887310000 0234567764 46654 4677751 1158999998753 344
Q ss_pred eccccccCCccccccceEEE-EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeecc
Q 044042 312 TGDRNFVDGWTTFNSATFAV-MAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYREC 390 (560)
Q Consensus 312 ~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c 390 (560)
.|. -|.| .+++++++||+|++... ....|+-+.-.++++-+.+|.|..-.+. ...++++
T Consensus 93 ~G~-------------gl~i~~a~NVIIrNl~i~~~~~-~~~DaI~i~~~s~nVWIDH~s~s~~~~g---~~~~~~~--- 152 (326)
T 3vmv_A 93 DGI-------------GIRLSNAHNIIIQNVSIHHVRE-GEGTAIEVTDDSKNVWIDHNEFYSEFPG---NGDSDYY--- 152 (326)
T ss_dssp ESC-------------CEEEESEEEEEEESCEEECCCS-TTSCSEEEETTCEEEEEESCEEECCSST---TSCTTSS---
T ss_pred eCc-------------EEEEEecceEEEECeEEEcCCC-CCCCeEEEecCCCcEEEEeeEEeccccC---CcCcccc---
Confidence 442 3455 68899999999998752 3456666654478999999999632100 1111222
Q ss_pred EEEcceeeeeccceEEEeeeEEEE
Q 044042 391 DIYGTIDFIFGNAAVVLQNCNIYL 414 (560)
Q Consensus 391 ~I~G~vDfIfG~~~a~f~~c~i~~ 414 (560)
-|.+|..-|.-...+++|.|..
T Consensus 153 --Dgl~di~~~s~~VTISnn~f~~ 174 (326)
T 3vmv_A 153 --DGLVDMKRNAEYITVSWNKFEN 174 (326)
T ss_dssp --CCSEEECTTCEEEEEESCEEEE
T ss_pred --CcceEecCCCceEEEEceEEec
Confidence 2566666555667788888763
No 32
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.57 E-value=0.062 Score=55.82 Aligned_cols=134 Identities=16% Similarity=0.227 Sum_probs=79.7
Q ss_pred EEEEeecCCceEEEecCCCceEEeccccccCCccccccceEEE-EeCcEEEEEeeEeeCCC--C---------CCCceee
Q 044042 289 YISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAV-MAPNFVAVDISFRNTAG--P---------SKHQAVA 356 (560)
Q Consensus 289 ~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g--~---------~~~qAvA 356 (560)
+|.|. .++||+|.|. ...|.|. -|.| .+++++++||+|++... | ....++-
T Consensus 75 ~l~v~---sn~TI~G~G~-~~~i~g~-------------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~ 137 (355)
T 1pcl_A 75 QISIP---SNTTIIGVGS-NGKFTNG-------------SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAV 137 (355)
T ss_pred eEEeC---CCeEEEEecC-CeEEecC-------------EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEE
Confidence 45553 4899999875 4455542 3555 46899999999998631 1 1234444
Q ss_pred eecCCCeEEEEEceeccccceee---ecCcceeeeccEEEcceeeeeccceEEEeeeEEEEecCCCCCceEEEecCCCCC
Q 044042 357 LRSGADLSTFYSCSFEGYQDSLY---THSQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDP 433 (560)
Q Consensus 357 l~~~~d~~~~~~c~~~g~QDTL~---~~~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~ 433 (560)
|. .++++-+.+|.|..-.|.=- ...||++. .-.|.+|+.-|.....+++|.|.... ++++. |..+.
T Consensus 138 i~-~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~---~~Dgl~Di~~~s~~VTiS~n~f~~h~-----k~~Li--G~sd~ 206 (355)
T 1pcl_A 138 ID-NSTNVWVDHVTISDGSFTDDKYTTKDGEKYV---QHDGALDIKKGSDYVTISYSRFELHD-----KTILI--GHSDS 206 (355)
T ss_pred ec-CCCcEEEEeeEEeccccCccccccccCcccc---ccccceeeecCCCcEEEEeeEEcCCC-----ceEEe--CCCCC
Confidence 42 47899999999985422110 01244432 11356777667777889999997422 23333 33222
Q ss_pred C-----CCceEEEeeeEEeecc
Q 044042 434 N-----QNTGISIHNCTFRAAD 450 (560)
Q Consensus 434 ~-----~~~G~vf~~c~i~~~~ 450 (560)
. ....+.|++|.|....
T Consensus 207 ~~~~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 207 NGSQDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred CcccccCcceEEEECcEEeCCc
Confidence 1 1235789999886443
No 33
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.35 E-value=0.018 Score=59.45 Aligned_cols=86 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred ceEEEEEeCcEEe----EEEEEeecCCceEEEecCCCceEEeccccccCCccccccceEEE-EeCcEEEEEeeEeeCCC-
Q 044042 275 GYFLIYIKEGVYQ----EYISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAV-MAPNFVAVDISFRNTAG- 348 (560)
Q Consensus 275 ~~~~I~I~~G~Y~----E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v-~~~~f~~~~lt~~Nt~g- 348 (560)
+|.+|.| .|+.. +.|.|. +++||+|.+.. .|.|. -|.| .+++++++||+|++...
T Consensus 46 ~PriIvv-~G~I~~~~~~~l~v~---snkTI~G~ga~--~I~G~-------------Gi~I~~a~NVIIrnl~i~~~~~~ 106 (340)
T 3zsc_A 46 GKYVIVV-DGTIVFEPKREIKVL---SDKTIVGINDA--KIVGG-------------GLVIKDAQNVIIRNIHFEGFYME 106 (340)
T ss_dssp SCEEEEE-EEEEEEEEEEEEEEC---SSEEEEEEEEE--EEEEE-------------EEEEESCEEEEEESCEEECCCCT
T ss_pred CCEEEEE-CcEEEeCCcceEEec---CCCEEEeccCc--EEecC-------------ceEEEcCceEEEeCeEEECCccc
Confidence 3456765 58876 456663 48999999865 66653 2444 46899999999998631
Q ss_pred --C----CCCceeeeecCCCeEEEEEceeccccceeee
Q 044042 349 --P----SKHQAVALRSGADLSTFYSCSFEGYQDSLYT 380 (560)
Q Consensus 349 --~----~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~ 380 (560)
+ ....|+-+. .++++-+.+|.|....|.++.
T Consensus 107 ~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~id 143 (340)
T 3zsc_A 107 DDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVD 143 (340)
T ss_dssp TCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEE
T ss_pred cCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceE
Confidence 1 134555554 378999999999987776554
No 34
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.14 E-value=0.044 Score=56.17 Aligned_cols=115 Identities=14% Similarity=0.185 Sum_probs=80.4
Q ss_pred ccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEc------ceee
Q 044042 325 NSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYG------TIDF 398 (560)
Q Consensus 325 ~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G------~vDf 398 (560)
....|.|.|+...++|..|... |. .|++.+.+..|++|.|.|.-|-+|= .+..+|.+|.|.- .-.+
T Consensus 113 qAvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG-~~~a~f~~c~i~~~~~~~~~~~~ 184 (319)
T 1gq8_A 113 QAVALRVGSDLSAFYRCDILAY------QD-SLYVHSNRQFFINCFIAGTVDFIFG-NAAVVLQDCDIHARRPGSGQKNM 184 (319)
T ss_dssp CCCSEEECCTTEEEEEEEEECS------TT-CEEECSSEEEEESCEEEESSSCEEE-SCEEEEESCEEEECCCSTTCCEE
T ss_pred ceEEEEecCCcEEEEEeEECcc------ce-eeeecCccEEEEecEEEeeeeEEec-CCcEEEEeeEEEEecCCCCCceE
Confidence 3456788999999999999843 43 5777888899999999999999994 5789999999973 2356
Q ss_pred eeccc--------eEEEeeeEEEEecCCCCC-ceEEEecCCCCCCCCceEEEeeeEEee
Q 044042 399 IFGNA--------AVVLQNCNIYLRLPMSGQ-YNVITAQGRTDPNQNTGISIHNCTFRA 448 (560)
Q Consensus 399 IfG~~--------~a~f~~c~i~~~~~~~~~-~~~itA~gr~~~~~~~G~vf~~c~i~~ 448 (560)
|.-.+ --+|+||+|......... ...-+--||.= ....-.||.+|.+..
T Consensus 185 itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW-~~~sr~v~~~t~~~~ 242 (319)
T 1gq8_A 185 VTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPW-KEYSRTVVMQSSITN 242 (319)
T ss_dssp EEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCS-STTCEEEEESCEECT
T ss_pred EEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccC-CCcceEEEEeccCCC
Confidence 66544 248999999864321100 00012235632 133468999999864
No 35
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.90 E-value=0.037 Score=57.67 Aligned_cols=146 Identities=16% Similarity=0.235 Sum_probs=88.9
Q ss_pred CceEEEEEeCcEEe----------------EEEEEeecCCceEEEecCCCceEEeccccccCCccccccceEEE----Ee
Q 044042 274 DGYFLIYIKEGVYQ----------------EYISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAV----MA 333 (560)
Q Consensus 274 ~~~~~I~I~~G~Y~----------------E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v----~~ 333 (560)
++|.+|.| .|+.. ..|.|. .++||+|.|.+ ..|.| .-|.| .+
T Consensus 52 ~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v~---snkTI~G~G~~-~~i~g-------------~gl~i~~~~~~ 113 (361)
T 1pe9_A 52 AEAKIIQI-KGTIDISGGTPYTDFADQKARSQINIP---ANTTVIGLGTD-AKFIN-------------GSLIIDGTDGT 113 (361)
T ss_dssp TSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEECC---SSEEEEECTTC-CEEES-------------SEEEEEGGGTC
T ss_pred CCcEEEEE-CCEEecCCccccccccccccceeEEec---CCcEEEccCCC-eEEec-------------CEEEEecCCCC
Confidence 34578866 57664 255554 49999998753 34444 34666 46
Q ss_pred CcEEEEEeeEeeCCC--C---------CCCceeeeecCCCeEEEEEceeccccce-----eeecCcceeeeccEEEccee
Q 044042 334 PNFVAVDISFRNTAG--P---------SKHQAVALRSGADLSTFYSCSFEGYQDS-----LYTHSQRQFYRECDIYGTID 397 (560)
Q Consensus 334 ~~f~~~~lt~~Nt~g--~---------~~~qAvAl~~~~d~~~~~~c~~~g~QDT-----L~~~~~r~~~~~c~I~G~vD 397 (560)
++++++||+|++... | ....|+-|.-.++++-+.+|.|..-.|. .| .||++. .--|.+|
T Consensus 114 ~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~--~G~~~~---~~DgllD 188 (361)
T 1pe9_A 114 NNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTK--DGETYV---QHDGALD 188 (361)
T ss_dssp EEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEE--TTEECC---CCCCSEE
T ss_pred ceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccc--cCccee---eccceee
Confidence 799999999998642 1 1234455544478999999999854322 22 245442 1125677
Q ss_pred eeeccceEEEeeeEEEEecCCCCCceEEEecCCCCCC-----CCceEEEeeeEEeec
Q 044042 398 FIFGNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPN-----QNTGISIHNCTFRAA 449 (560)
Q Consensus 398 fIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~-----~~~G~vf~~c~i~~~ 449 (560)
+.-|.-...+.+|.|.-.. ++++. |..+.. ....+.|+++.|...
T Consensus 189 i~~~s~~VTiS~n~f~~h~-----k~~Li--G~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 189 IKRGSDYVTISNSLIDQHD-----KTMLI--GHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp ECTTCEEEEEESCEEEEEE-----ECEEE--SCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred eecCCCcEEEEeeEEcCCC-----ceeEe--cCCCCCcccccCcceEEEECeEEcCc
Confidence 7667777889999987532 23333 333221 123577888888543
No 36
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.83 E-value=0.06 Score=55.09 Aligned_cols=115 Identities=13% Similarity=0.176 Sum_probs=80.1
Q ss_pred ccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEc------ceee
Q 044042 325 NSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYG------TIDF 398 (560)
Q Consensus 325 ~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G------~vDf 398 (560)
....|.|.|+...++|..|... |. .|++.+.+..|++|.|.|.-|-+|=. +..+|.+|.|.- .-.+
T Consensus 109 qAvAl~v~~d~~~f~~c~f~g~------QD-TLy~~~~r~~~~~c~I~G~vDFIfG~-~~avf~~c~i~~~~~~~~~~~~ 180 (317)
T 1xg2_A 109 QAVALRVGADMSVINRCRIDAY------QD-TLYAHSQRQFYRDSYVTGTVDFIFGN-AAVVFQKCQLVARKPGKYQQNM 180 (317)
T ss_dssp CCCSEEECCTTEEEESCEEECS------TT-CEEECSSEEEEESCEEEESSSCEEEC-CEEEEESCEEEECCCSTTCCEE
T ss_pred ceEEEEEeCCcEEEEEeEeCcc------cc-ceeecCccEEEEeeEEEeceeEEcCC-ceEEEeeeEEEEeccCCCCccE
Confidence 3456788999999999999843 43 57788888899999999999999954 679999999973 3356
Q ss_pred eeccc--------eEEEeeeEEEEecCCCCC-ceEEEecCCCCCCCCceEEEeeeEEee
Q 044042 399 IFGNA--------AVVLQNCNIYLRLPMSGQ-YNVITAQGRTDPNQNTGISIHNCTFRA 448 (560)
Q Consensus 399 IfG~~--------~a~f~~c~i~~~~~~~~~-~~~itA~gr~~~~~~~G~vf~~c~i~~ 448 (560)
|.-.+ --+|+||+|......... ...-+--||.= ....-.||.+|.+..
T Consensus 181 itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW-~~~sr~v~~~t~~~~ 238 (317)
T 1xg2_A 181 VTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPW-KEYSRTVVMESYLGG 238 (317)
T ss_dssp EEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCS-STTCEEEEESCEECT
T ss_pred EEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeeccc-CCCceEEEEecccCC
Confidence 66543 358999999864321100 00012235632 123468999999864
No 37
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.81 E-value=0.038 Score=57.20 Aligned_cols=78 Identities=18% Similarity=0.333 Sum_probs=62.6
Q ss_pred EEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEcc----------eeee
Q 044042 330 AVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGT----------IDFI 399 (560)
Q Consensus 330 ~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~----------vDfI 399 (560)
.|.|+...++|..|.. .|. .|++.+.|..|++|.|+|.=|-+|=. ++.+|.+|.|.=. --+|
T Consensus 136 ~v~~d~~~f~~c~f~G------~QD-TLy~~~gr~~~~~c~I~G~vDFIFG~-a~a~f~~c~i~~~~~~~~~~~~~~g~I 207 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVG------YQA-TLYVSGGRSFFSDCRISGTVDFIFGD-GTALFNNCDLVSRYRADVKSGNVSGYL 207 (342)
T ss_dssp CTTCBSEEEEEEEEEC------STT-CEEECSSEEEEESCEEEESEEEEEES-SEEEEESCEEEECCCTTSCTTSCCEEE
T ss_pred eeccCcEEEEeeEEec------ccc-eEEECCCCEEEEcCEEEeceEEEeCC-ceEEEecCEEEEecCcccccccCceEE
Confidence 6789999999999984 354 58888889999999999999998865 6899999999621 1477
Q ss_pred eccce-------EEEeeeEEEEe
Q 044042 400 FGNAA-------VVLQNCNIYLR 415 (560)
Q Consensus 400 fG~~~-------a~f~~c~i~~~ 415 (560)
.-.+. -+|++|+|...
T Consensus 208 tA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 208 TAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EEECCBTTCSCCEEEESCEEEES
T ss_pred EccCCCCCCCCEEEEEcCEEecC
Confidence 65432 48999999864
No 38
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=95.73 E-value=0.027 Score=58.11 Aligned_cols=136 Identities=11% Similarity=0.094 Sum_probs=75.9
Q ss_pred EEEEeCcEEEEEeeEeeCCCCCCCceeeeec-CCCe-EEEEEceeccc----------cceeeecCcceeeeccEEEcce
Q 044042 329 FAVMAPNFVAVDISFRNTAGPSKHQAVALRS-GADL-STFYSCSFEGY----------QDSLYTHSQRQFYRECDIYGTI 396 (560)
Q Consensus 329 ~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~-~~~~~c~~~g~----------QDTL~~~~~r~~~~~c~I~G~v 396 (560)
|.+....++++||+++|+... .+.+ ..++ +.+.+|.+... -|.+-........++|+|.-.-
T Consensus 100 i~~~~~~v~i~giti~nsp~~------~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~gD 173 (335)
T 1k5c_A 100 FLKIKGSGTYKKFEVLNSPAQ------AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQD 173 (335)
T ss_dssp SEEEEEEEEEESCEEESCSSC------CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESSS
T ss_pred EEEeceEEEEEEEEEECCCcc------eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcCC
Confidence 444333399999999998532 2333 3566 88888888864 3445553345567888888544
Q ss_pred eee-ecc-ceEEEeeeEEEEecCCCCCceEEEecCCCC-CCCCceEEEeeeEEeeccccccccCcceEEeeccCCCCCcE
Q 044042 397 DFI-FGN-AAVVLQNCNIYLRLPMSGQYNVITAQGRTD-PNQNTGISIHNCTFRAADELALSNQTVQTYLGRPWKEYSRT 473 (560)
Q Consensus 397 DfI-fG~-~~a~f~~c~i~~~~~~~~~~~~itA~gr~~-~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~~ 473 (560)
|-| ++. ...+|+||.+..- .| |.. |... ...-..+.|.||++....... ..+++-||+-..-..+
T Consensus 174 DcIaiksg~nI~i~n~~~~~g------hG-isI-GS~g~~~~v~nV~v~n~~~~~t~~gi----rIKt~~g~~~G~v~nI 241 (335)
T 1k5c_A 174 DCIAINDGNNIRFENNQCSGG------HG-ISI-GSIATGKHVSNVVIKGNTVTRSMYGV----RIKAQRTATSASVSGV 241 (335)
T ss_dssp CSEEEEEEEEEEEESCEEESS------CC-EEE-EEECTTCEEEEEEEESCEEEEEEEEE----EEEEETTCCSCEEEEE
T ss_pred CEEEeeCCeeEEEEEEEEECC------cc-CeE-eeccCCCCEEEEEEEeeEEECCCceE----EEEEeCCCCcceEeee
Confidence 422 222 4567888887741 12 222 1111 233456789999987754211 1234444431223455
Q ss_pred EEeccCCCC
Q 044042 474 VIMQSFMDS 482 (560)
Q Consensus 474 v~~~s~~~~ 482 (560)
.|-+-.|.+
T Consensus 242 ~f~ni~~~~ 250 (335)
T 1k5c_A 242 TYDANTISG 250 (335)
T ss_dssp EEESCEEEE
T ss_pred EEEEEEEEc
Confidence 666655554
No 39
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=95.39 E-value=0.098 Score=55.47 Aligned_cols=126 Identities=17% Similarity=0.269 Sum_probs=76.1
Q ss_pred CceEEEecCCCceEEeccccccCCccccccceEEEE-eCcEEEEEeeEeeCCC--C-------------CCCceeeeecC
Q 044042 297 KILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAVM-APNFVAVDISFRNTAG--P-------------SKHQAVALRSG 360 (560)
Q Consensus 297 ~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~-~~~f~~~~lt~~Nt~g--~-------------~~~qAvAl~~~ 360 (560)
.++||+|.|.+ ..|.| .-|.|. +++++++||+|++... | ....|+-| ..
T Consensus 132 snkTI~G~G~~-~~i~g-------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~ 196 (416)
T 1vbl_A 132 SNTSIIGVGKD-AKIKG-------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI-EG 196 (416)
T ss_dssp SSEEEEECTTC-CEEES-------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE-ES
T ss_pred CCeeEEecCCC-eEEec-------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe-cC
Confidence 48999999753 44444 235564 6799999999998632 1 11234444 25
Q ss_pred CCeEEEEEceeccccce-----eeecCcceeeeccEEEcceeeeeccceEEEeeeEEEEecCCCCCceEEEecCCCCCC-
Q 044042 361 ADLSTFYSCSFEGYQDS-----LYTHSQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPN- 434 (560)
Q Consensus 361 ~d~~~~~~c~~~g~QDT-----L~~~~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~- 434 (560)
++++-+.+|.|..-.|. .| -||++. .--|.+|+.=|.-...+.+|.|.... ++++. |..+..
T Consensus 197 s~nVWIDHcs~s~~~~~d~~~~~~--~Gr~~~---~~DGl~Di~~~s~~VTISnn~f~~h~-----k~~Li--G~sd~~~ 264 (416)
T 1vbl_A 197 SSHIWIDHNTFTDGDHPDRSLGTY--FGRPFQ---QHDGALDIKNSSDFITISYNVFTNHD-----KVTLI--GASDSRM 264 (416)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEE--TTEECC---CCCCSEEEESSCEEEEEESCEEEEEE-----ECCEE--CSCTTCG
T ss_pred CceEEEEccEEecCCCcccccccc--cCccee---ecccceeeecCCCcEEEEeeEEcCCC-----ceeEe--CCCCCCc
Confidence 78999999999854321 11 145543 11266777666777889999997532 12222 332221
Q ss_pred ---CCceEEEeeeEEeec
Q 044042 435 ---QNTGISIHNCTFRAA 449 (560)
Q Consensus 435 ---~~~G~vf~~c~i~~~ 449 (560)
....+.|+++.|...
T Consensus 265 ~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 265 ADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp GGTTCCCEEEESCEEEEE
T ss_pred ccCCceEEEEECcEecCC
Confidence 123478888888543
No 40
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.38 E-value=0.079 Score=55.88 Aligned_cols=127 Identities=17% Similarity=0.319 Sum_probs=77.9
Q ss_pred CCceEEEecCCCceEEeccccccCCccccccceEEEEeCcEEEEEeeEeeCCC--C-------------CCCceeeeecC
Q 044042 296 KKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAVMAPNFVAVDISFRNTAG--P-------------SKHQAVALRSG 360 (560)
Q Consensus 296 ~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g--~-------------~~~qAvAl~~~ 360 (560)
.+++||+|.|.+ ..|.| ..|.|.+++++++||+|++... | ....|+-+ ..
T Consensus 126 ~snkTI~G~G~~-~~i~g-------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i-~~ 190 (399)
T 2o04_A 126 PANTTIVGSGTN-AKVVG-------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI-NG 190 (399)
T ss_dssp CSSEEEEESSSC-CEEES-------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE-ES
T ss_pred CCCceEEeccCC-eEEee-------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEe-cC
Confidence 358999999753 34444 3477777899999999998632 1 12244444 25
Q ss_pred CCeEEEEEceeccccce-----eeecCcceeeeccEEEcceeeeeccceEEEeeeEEEEecCCCCCceEEEecCCCCCC-
Q 044042 361 ADLSTFYSCSFEGYQDS-----LYTHSQRQFYRECDIYGTIDFIFGNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDPN- 434 (560)
Q Consensus 361 ~d~~~~~~c~~~g~QDT-----L~~~~~r~~~~~c~I~G~vDfIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~~- 434 (560)
++++-+.+|.|.--.|. .|. ||+|.. --|.+|+.=|.-...+++|.|.... ++++. |..+..
T Consensus 191 s~nVWIDHcs~s~~~~~d~~~~~~~--G~~~~~---~Dgl~Di~~~s~~VTISnn~f~~h~-----k~~Li--G~sd~~~ 258 (399)
T 2o04_A 191 GTHIWIDHCTFNDGSRPDSTSPKYY--GRKYQH---HDGQTDASNGANYITMSYNYYHDHD-----KSSIF--GSSDSKT 258 (399)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEET--TEECCC---CCCSEEEETTCEEEEEESCEEEEEE-----ECCEE--SCCTTCG
T ss_pred CCcEEEEeeeeecCCCccccccccc--cceeec---cccceeeeccCCcEEEEeeEEcCCC-----ceeEe--CCCCCCc
Confidence 78999999999854321 111 444431 1256777667777889999997432 12222 322211
Q ss_pred ---CCceEEEeeeEEeec
Q 044042 435 ---QNTGISIHNCTFRAA 449 (560)
Q Consensus 435 ---~~~G~vf~~c~i~~~ 449 (560)
....+.|+++.|...
T Consensus 259 ~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 259 SDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp GGTTCCCEEEESCEEEEE
T ss_pred cccCceeEEEECcEecCC
Confidence 123578888888543
No 41
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.23 E-value=0.088 Score=54.87 Aligned_cols=113 Identities=15% Similarity=0.198 Sum_probs=77.5
Q ss_pred ceeeeecCCCeEEEEEceeccc--------------------c-ceeee--cCcceeeeccEEEcceeeeecc--ceEEE
Q 044042 353 QAVALRSGADLSTFYSCSFEGY--------------------Q-DSLYT--HSQRQFYRECDIYGTIDFIFGN--AAVVL 407 (560)
Q Consensus 353 qAvAl~~~~d~~~~~~c~~~g~--------------------Q-DTL~~--~~~r~~~~~c~I~G~vDfIfG~--~~a~f 407 (560)
+...+.+.++.+.++|..|... | -.|++ ++.|..|++|.+.|.=|-+|-. +..+|
T Consensus 113 ~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~~gr~yf 192 (364)
T 3uw0_A 113 GSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKTGSRSYF 192 (364)
T ss_dssp TCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECTTCEEEE
T ss_pred CeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCCCCCEEE
Confidence 3456778899999999999633 3 25666 3678899999999999988865 78999
Q ss_pred eeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeeccccccccCcceEEe---eccCCCCCcEEEeccCCC
Q 044042 408 QNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYL---GRPWKEYSRTVIMQSFMD 481 (560)
Q Consensus 408 ~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW~~~s~~v~~~s~~~ 481 (560)
.+|.|.- ..-+|.=.| --+|++|.|..-...... ....|+ +|+-....--||.+|.|.
T Consensus 193 ~~c~I~G------tvDFIFG~a--------~a~f~~c~i~~~~~~~~~--~~~g~ITA~~~~~~~~~G~vf~~c~i~ 253 (364)
T 3uw0_A 193 SDCEISG------HVDFIFGSG--------ITVFDNCNIVARDRSDIE--PPYGYITAPSTLTTSPYGLIFINSRLT 253 (364)
T ss_dssp ESCEEEE------SEEEEEESS--------EEEEESCEEEECCCSSCS--SCCEEEEEECCCTTCSCCEEEESCEEE
T ss_pred EcCEEEc------CCCEECCcc--------eEEEEeeEEEEeccCccc--CCccEEEeCCcCCCCCcEEEEEeeEEe
Confidence 9999983 234665433 258999999864311000 011222 454333445799999985
No 42
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=95.06 E-value=0.16 Score=55.72 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=74.3
Q ss_pred EEeCcEEEEEeeEeeCCCCCCCceeeeecCC-Ce--EEEEEceecc----ccceeeecCcceeeeccEEEcceeeee-cc
Q 044042 331 VMAPNFVAVDISFRNTAGPSKHQAVALRSGA-DL--STFYSCSFEG----YQDSLYTHSQRQFYRECDIYGTIDFIF-GN 402 (560)
Q Consensus 331 v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~-d~--~~~~~c~~~g----~QDTL~~~~~r~~~~~c~I~G~vDfIf-G~ 402 (560)
....++.++||+|.|+. ...+.+.... +. +.+.++.+.+ .-|.+-.. .....++|+|.-.-|-|- +.
T Consensus 290 ~~c~nV~I~Giti~Nsp----~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~-~nV~I~n~~i~~gDDcIaIks 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP----FNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY-PGTILQDVFYHTDDDGLKMYY 364 (549)
T ss_dssp SSCEEEEEESCEEECCS----SCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC-TTCEEEEEEEEESSCCEECCS
T ss_pred CCceEEEEECcEEECCC----ceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc-CCEEEEeeEEeCCCCEEEECC
Confidence 34568999999999984 2334544455 67 8999999864 35666666 566788999987767653 34
Q ss_pred ceEEEeeeEEEEecCCCCCceE-EEecCCCCCCCCceEEEeeeEEeecc
Q 044042 403 AAVVLQNCNIYLRLPMSGQYNV-ITAQGRTDPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 403 ~~a~f~~c~i~~~~~~~~~~~~-itA~gr~~~~~~~G~vf~~c~i~~~~ 450 (560)
...+++||++.... .+. |+. |.. +..-..+.|.||.|....
T Consensus 365 ~NI~I~n~~~~~~~-----g~~~Isi-Gs~-~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 365 SNVTARNIVMWKES-----VAPVVEF-GWT-PRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp SSEEEEEEEEEECS-----SSCSEEC-CBS-CCCEEEEEEEEEEEEECC
T ss_pred CCEEEEeeEEEcCC-----CCceEEE-CCC-CCcEEEEEEEeeEEECcc
Confidence 56889999987532 122 443 442 445567899999998754
No 43
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=94.91 E-value=0.13 Score=54.41 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=76.3
Q ss_pred eeeecCCCeEEEEEceec----------ccc-ceeeecCcceeeeccEEEcceeeeec-------------cceEEEeee
Q 044042 355 VALRSGADLSTFYSCSFE----------GYQ-DSLYTHSQRQFYRECDIYGTIDFIFG-------------NAAVVLQNC 410 (560)
Q Consensus 355 vAl~~~~d~~~~~~c~~~----------g~Q-DTL~~~~~r~~~~~c~I~G~vDfIfG-------------~~~a~f~~c 410 (560)
.-+.+.++.+..+|..|. +.| -.|++.+.|..|++|.+.|.=|-+|- .+..+|.+|
T Consensus 194 AT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~C 273 (422)
T 3grh_A 194 AVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNS 273 (422)
T ss_dssp CSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESC
T ss_pred EEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEec
Confidence 345678899999999985 223 47888888999999999999999984 478999999
Q ss_pred EEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeeccccccccCcceEEeec-cCCCCCcEEEeccCCCC
Q 044042 411 NIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAADELALSNQTVQTYLGR-PWKEYSRTVIMQSFMDS 482 (560)
Q Consensus 411 ~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGR-pW~~~s~~v~~~s~~~~ 482 (560)
.|.- ..-+|-=.+ --+|++|.|..-..... ..+-+--+| +=....--||.+|.|..
T Consensus 274 yIeG------tVDFIFG~a--------~AvFe~C~I~s~~~~~~--~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 274 YIEG------DVDIVSGRG--------AVVFDNTEFRVVNSRTQ--QEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEEE------SEEEEEESS--------EEEEESCEEEECCSSCS--SCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred EEec------cccEEccCc--------eEEEEeeEEEEecCCCC--CceEEEecCCCCCCCCEEEEECCEEEe
Confidence 9973 234565332 25899999986432110 011111233 22234457999999863
No 44
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=93.89 E-value=0.66 Score=51.11 Aligned_cols=107 Identities=10% Similarity=0.075 Sum_probs=72.9
Q ss_pred EeCcEEEEEeeEeeCCCCCCCceeeeecCCCeE--EEEEceecc---c-cceeeecCcceeeeccEEEcceeee-eccce
Q 044042 332 MAPNFVAVDISFRNTAGPSKHQAVALRSGADLS--TFYSCSFEG---Y-QDSLYTHSQRQFYRECDIYGTIDFI-FGNAA 404 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~--~~~~c~~~g---~-QDTL~~~~~r~~~~~c~I~G~vDfI-fG~~~ 404 (560)
...++.++||||.|+.. ..+-+ ...+++ .+.+|++.+ + -|.+-.. .....++|+|.-.-|-| .+...
T Consensus 331 ~c~NV~I~Giti~NSp~----w~i~~-~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~N 404 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPF----NTMDF-NGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSG 404 (574)
T ss_dssp SSEEEEEESCEEECCSS----CSEEE-CSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESSCSEECCSTT
T ss_pred CceeEEEECeEEECCCC----cEEee-cCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCCCEEEECCcc
Confidence 56789999999999732 22222 356788 999998763 3 6777776 56678899998666655 34466
Q ss_pred EEEeeeEEEEecCCCCCceEEEecCCCCCCCCceEEEeeeEEeecc
Q 044042 405 VVLQNCNIYLRLPMSGQYNVITAQGRTDPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 405 a~f~~c~i~~~~~~~~~~~~itA~gr~~~~~~~G~vf~~c~i~~~~ 450 (560)
.+++||++..... .+.|.. |. ++..-..+.|.||+|....
T Consensus 405 I~I~nc~i~~g~g----~g~IsI-GS-~~g~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 405 ASVSRATIWKCHN----DPIIQM-GW-TSRDISGVTIDTLNVIHTR 444 (574)
T ss_dssp CEEEEEEEEECSS----SCSEEC-CS-SCCCEEEEEEEEEEEEECC
T ss_pred EEEEeEEEECCCC----CceEEE-cC-CCCcEEEEEEEeEEEECCc
Confidence 7899999876321 111433 33 3455668899999997654
No 45
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=90.12 E-value=5.8 Score=40.47 Aligned_cols=110 Identities=17% Similarity=0.192 Sum_probs=71.2
Q ss_pred EeCcEEEEEeeEeeCCCC----CCCceeeeec-CCCeEEEEEceeccccceeeecCcce-eeeccEEEcceeeeecc---
Q 044042 332 MAPNFVAVDISFRNTAGP----SKHQAVALRS-GADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFIFGN--- 402 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~----~~~qAvAl~~-~~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfIfG~--- 402 (560)
..++++++|++|.+..+. .... ++.+ .++++.+.||.|..--|-+.+.+++. .+++|++.+.-.+-+|.
T Consensus 130 ~~~nv~i~~~~I~~~~~d~~~~~ntD--Gid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSlg~ 207 (339)
T 2iq7_A 130 SATTLGVYDVIIDNSAGDSAGGHNTD--AFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGG 207 (339)
T ss_dssp SCEEEEEESCEEECGGGGGTTCCSCC--SEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEESS
T ss_pred ccCCEEEEEEEEECCccccccCCCCC--cEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcCCc
Confidence 356789999999887431 1222 4555 46889999999987778888887655 57899988766666655
Q ss_pred ------ceEEEeeeEEEEecCCCCCceEE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 ------AAVVLQNCNIYLRLPMSGQYNVI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 ------~~a~f~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
...+|+||++.... ..-.| +.+|| ...-..+.|+|.++...
T Consensus 208 ~~~~~v~nV~v~n~~~~~~~----~girIkt~~g~--~G~v~nI~~~ni~~~~v 255 (339)
T 2iq7_A 208 RSDNTVKTVTISNSKIVNSD----NGVRIKTVSGA--TGSVSGVTYSGITLSNI 255 (339)
T ss_dssp SSCCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEE
T ss_pred ccCCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CeEEEEEEEEeEEccCc
Confidence 23578888886321 11122 33443 22345677888888754
No 46
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=89.61 E-value=5.4 Score=40.76 Aligned_cols=112 Identities=14% Similarity=0.160 Sum_probs=72.7
Q ss_pred EeCcEEEEEeeEeeCCCCC--CCceeeeec-CCCeEEEEEceeccccceeeecCcce-eeeccEEEcceeeeecc-----
Q 044042 332 MAPNFVAVDISFRNTAGPS--KHQAVALRS-GADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFIFGN----- 402 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~-~~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfIfG~----- 402 (560)
..++++++|++|.+..+.. .+-.=++.+ .++++.+.||.|..--|-+.+.+++. .+++|++.+.-.+-+|.
T Consensus 134 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~g~~~ 213 (339)
T 1ia5_A 134 GSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGRS 213 (339)
T ss_dssp SCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEECSSS
T ss_pred cccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcCCccc
Confidence 3568999999999874311 111224555 46889999999987788888887755 57899998766666654
Q ss_pred ----ceEEEeeeEEEEecCCCCCceEE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 ----AAVVLQNCNIYLRLPMSGQYNVI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 ----~~a~f~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
...+|+||++.... ..-.| +.+|| ...-..+.|+|.++...
T Consensus 214 ~~~v~nV~v~n~~~~~t~----~girIKt~~g~--~G~v~nI~~~ni~~~~v 259 (339)
T 1ia5_A 214 DNTVKNVTFVDSTIINSD----NGVRIKTNIDT--TGSVSDVTYKDITLTSI 259 (339)
T ss_dssp CCEEEEEEEEEEEEESCS----EEEEEEEETTC--CCEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEeeEEECCC----cEEEEEEeCCC--CcEEEeeEEEEEEEECc
Confidence 23568888886321 11122 33443 22345677888888754
No 47
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=89.02 E-value=3.4 Score=42.43 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=70.2
Q ss_pred EeCcEEEEEeeEeeCCCCC----------CCceeeeec-CCCeEEEEEceeccccceeeecCcce-eeeccEEEcceeee
Q 044042 332 MAPNFVAVDISFRNTAGPS----------KHQAVALRS-GADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFI 399 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~----------~~qAvAl~~-~~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfI 399 (560)
..++++++|++|.+..+.. .+-.=++.+ .++++.+.||.|..--|-+.+.+++. .+++|++.+.-.+-
T Consensus 134 ~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGis 213 (349)
T 1hg8_A 134 GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLS 213 (349)
T ss_dssp SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESSCCEE
T ss_pred ccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCCcceE
Confidence 3567999999999864311 111224555 36889999999987778888887755 57888888655565
Q ss_pred ecc---------ceEEEeeeEEEEecCCCCCceEE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 400 FGN---------AAVVLQNCNIYLRLPMSGQYNVI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 400 fG~---------~~a~f~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
+|. ....|+||+|..... .-.| +.+|| ...-..+.|+|.++...
T Consensus 214 iGS~G~~~~~~v~nV~v~n~~~~~~~~----GirIKt~~g~--~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 214 IGSVGGKSDNVVDGVQFLSSQVVNSQN----GCRIKSNSGA--TGTINNVTYQNIALTNI 267 (349)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEEEEEE----EEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred EccccccccCCEEEEEEEEEEEECCCc----EEEEEecCCC--CccccceEEEEEEEEcc
Confidence 654 235788888874321 1122 23332 12234566888877654
No 48
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=88.42 E-value=1.9 Score=47.48 Aligned_cols=28 Identities=25% Similarity=0.186 Sum_probs=21.7
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCc-EEeE
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEG-VYQE 288 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G-~Y~E 288 (560)
=..||+||+++... +.-+|+|.+| +|.-
T Consensus 64 T~AIqkAIdaCs~~-----GGgtV~VPaG~tYLt 92 (600)
T 2x6w_A 64 RQYLQAAIDYVSSN-----GGGTITIPAGYTWYL 92 (600)
T ss_dssp HHHHHHHHHHHHHT-----TCEEEEECTTCEEEE
T ss_pred HHHHHHHHHHhhhc-----CCCEEEECCCCEEEe
Confidence 35799999998653 2268999999 9965
No 49
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=88.30 E-value=5.7 Score=43.97 Aligned_cols=108 Identities=10% Similarity=0.111 Sum_probs=65.6
Q ss_pred EeCcEEEEEeeEeeCCCCCCCceeeeec-CCCeEEEEEceeccccceeeecCc------------ceeeeccEEEcceee
Q 044042 332 MAPNFVAVDISFRNTAGPSKHQAVALRS-GADLSTFYSCSFEGYQDSLYTHSQ------------RQFYRECDIYGTIDF 398 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~QDTL~~~~~------------r~~~~~c~I~G~vDf 398 (560)
..++++++|++|.+..++ +.. ++.+ .++++.+.||.|..--|-+.+.++ .-.+++|++.+.-+.
T Consensus 361 ~~~nv~i~~v~i~~~~~~-NtD--Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~ 437 (608)
T 2uvf_A 361 ENHNVVANGLIHQTYDAN-NGD--GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGA 437 (608)
T ss_dssp SCEEEEEESCEEECTTCT-TCC--SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCS
T ss_pred cCCCEEEeeEEEcCCCCC-CCC--eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCe
Confidence 345778888887653222 233 3444 357788888888765666666543 335788888776554
Q ss_pred -eecc------ceEEEeeeEEEEecCCCCCce-EE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 399 -IFGN------AAVVLQNCNIYLRLPMSGQYN-VI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 399 -IfG~------~~a~f~~c~i~~~~~~~~~~~-~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
++|. ...+|+||.+..- ..| .| |.+||. +.-..+.|+|+++...
T Consensus 438 ~~iGS~~~~~v~nI~v~n~~~~~t-----~~GirIKt~~g~g--G~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 438 IVTGSHTGAWIEDILAENNVMYLT-----DIGLRAKSTSTIG--GGARNVTFRNNAMRDL 490 (608)
T ss_dssp EEEESCCTTCEEEEEEESCEEESC-----SEEEEEEEETTTC--CEEEEEEEEEEEEEEE
T ss_pred EEEcccCCCCEEEEEEEeEEEECC-----CceEEEeeecCCC--ceEECcEEEeeEEEcc
Confidence 3665 3477888888732 112 12 444543 2345677888888765
No 50
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=87.77 E-value=9.2 Score=38.94 Aligned_cols=112 Identities=14% Similarity=0.176 Sum_probs=75.9
Q ss_pred EEEEeCcEEEEEeeEeeCCC----CCCCceeeeecC-CCeEEEEEceeccccceeeecCcce-eeeccEEEcceeeeecc
Q 044042 329 FAVMAPNFVAVDISFRNTAG----PSKHQAVALRSG-ADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFIFGN 402 (560)
Q Consensus 329 ~~v~~~~f~~~~lt~~Nt~g----~~~~qAvAl~~~-~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfIfG~ 402 (560)
+.+..++++++|++|.+..+ ..... ++.+. ++++.+.||.|..--|-+.+.+++. .+++|++.+.-.+-+|.
T Consensus 126 i~i~~~nv~i~~~~I~~~~~d~~~~~ntD--Gidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS 203 (336)
T 1nhc_A 126 ISVQATNVHLNDFTIDNSDGDDNGGHNTD--GFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGS 203 (336)
T ss_dssp EEEEEEEEEEESCEEECTTHHHHTCCSCC--SEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEE
T ss_pred EEEEeCCEEEEEEEEECCCcccccCCCCC--cEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEcc
Confidence 33347899999999999753 11223 46654 5899999999988888999988755 58999998766777765
Q ss_pred ---------ceEEEeeeEEEEecCCCCCceE-E-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 ---------AAVVLQNCNIYLRLPMSGQYNV-I-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 ---------~~a~f~~c~i~~~~~~~~~~~~-i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
...+|+||++... ..+. | +.+|| ...-..+.|+|.++...
T Consensus 204 ~g~~~~~~v~nV~v~n~~~~~t-----~~girIkt~~g~--~G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 204 VGGRDDNTVKNVTISDSTVSNS-----ANGVRIKTIYKE--TGDVSEITYSNIQLSGI 254 (336)
T ss_dssp ESSSSCCEEEEEEEEEEEEESC-----SEEEEEEEETTC--CCEEEEEEEEEEEEEEE
T ss_pred CccccCCCEEEEEEEeeEEECC-----CcEEEEEEECCC--CCEEeeeEEeeEEeecc
Confidence 2356888888631 1121 2 33443 22345677888888764
No 51
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=86.65 E-value=10 Score=39.75 Aligned_cols=84 Identities=13% Similarity=0.222 Sum_probs=55.2
Q ss_pred eEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccc---------eeeecC---cceeeeccEEEcc
Q 044042 328 TFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQD---------SLYTHS---QRQFYRECDIYGT 395 (560)
Q Consensus 328 t~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QD---------TL~~~~---~r~~~~~c~I~G~ 395 (560)
-|.|.+++.+++|++|.+.... .+.|.-.+.+..+.+|.+.+..| .+.++. ....|++|.+..+
T Consensus 131 GI~v~gs~~~i~n~~i~~n~~~----GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N 206 (400)
T 1ru4_A 131 GAYVIGSHNTFENTAFHHNRNT----GLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWEN 206 (400)
T ss_dssp SEEECSSSCEEESCEEESCSSC----SEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESC
T ss_pred cEEEeCCCcEEEeEEEECCCce----eEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeec
Confidence 4667888889999999876321 13333233477888999988763 444432 2446789999876
Q ss_pred ee---eeecc-ceEEEeeeEEEEe
Q 044042 396 ID---FIFGN-AAVVLQNCNIYLR 415 (560)
Q Consensus 396 vD---fIfG~-~~a~f~~c~i~~~ 415 (560)
.| .+|+. +.++|++|..+..
T Consensus 207 ~ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 207 SDDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SSCSEECTTCCSCCEEESCEEEST
T ss_pred CCCcEEEEecCCCEEEEeEEEECC
Confidence 65 23343 4568999988744
No 52
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=84.74 E-value=7.4 Score=41.00 Aligned_cols=20 Identities=0% Similarity=-0.109 Sum_probs=9.0
Q ss_pred CeEEEEEceeccccceeeec
Q 044042 362 DLSTFYSCSFEGYQDSLYTH 381 (560)
Q Consensus 362 d~~~~~~c~~~g~QDTL~~~ 381 (560)
.++.+.||.|..--|.+.+.
T Consensus 184 ~nV~I~n~~i~~gDD~Iai~ 203 (422)
T 1rmg_A 184 SNIWVHDVEVTNKDECVTVK 203 (422)
T ss_dssp EEEEEEEEEEESSSEEEEEE
T ss_pred CeEEEEeeEEeCCCCeEEeC
Confidence 44444444444434444443
No 53
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=84.10 E-value=16 Score=37.56 Aligned_cols=109 Identities=9% Similarity=0.104 Sum_probs=66.2
Q ss_pred EeCcEEEEEeeEeeCCCCCCCceeeeec-CCCeEEEEEceeccccceeeecC-------cceeeeccEEEcceeeeecc-
Q 044042 332 MAPNFVAVDISFRNTAGPSKHQAVALRS-GADLSTFYSCSFEGYQDSLYTHS-------QRQFYRECDIYGTIDFIFGN- 402 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~-~~d~~~~~~c~~~g~QDTL~~~~-------~r~~~~~c~I~G~vDfIfG~- 402 (560)
..++++++|++|.+.+...... ++.+ .+.++.+.||.|..--|-+.+.+ ..-.+++|++.+.--+-+|.
T Consensus 181 ~~~~v~i~~v~I~~~~~~~NtD--Gid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe 258 (376)
T 1bhe_A 181 DGDGFTAWKTTIKTPSTARNTD--GIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSE 258 (376)
T ss_dssp SCEEEEEEEEEEECCTTCSSCC--SEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEE
T ss_pred CCCcEEEEeEEEECCCCCCCCc--eEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEeccC
Confidence 3568889999998875433333 4444 35788899999987777777763 23367788887543344543
Q ss_pred ----ceEEEeeeEEEEecCCCCCce-EE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 ----AAVVLQNCNIYLRLPMSGQYN-VI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 ----~~a~f~~c~i~~~~~~~~~~~-~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
...+|+||+|..- ..| .| |.++|. ..-..+.|+|.++...
T Consensus 259 ~~~v~nV~v~n~~~~~t-----~~GirIKt~~g~~--G~v~ni~f~ni~~~~v 304 (376)
T 1bhe_A 259 TMGVYNVTVDDLKMNGT-----TNGLRIKSDKSAA--GVVNGVRYSNVVMKNV 304 (376)
T ss_dssp ESSEEEEEEEEEEEESC-----SEEEEEECCTTTC--CEEEEEEEEEEEEESC
T ss_pred CccEeeEEEEeeEEeCC-----CcEEEEEEecCCC--ceEeeEEEEeEEEeCC
Confidence 4567888888732 122 22 222321 2233566777777643
No 54
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=82.84 E-value=16 Score=37.18 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=70.2
Q ss_pred EEeCc-EEEEEeeEeeCCC-----CCCCceeeeecCCCeEEEEEceeccccceeeecCcce-eeeccEEEcceeeeecc-
Q 044042 331 VMAPN-FVAVDISFRNTAG-----PSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFIFGN- 402 (560)
Q Consensus 331 v~~~~-f~~~~lt~~Nt~g-----~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfIfG~- 402 (560)
...++ ++++|++|.|..+ ......+-+ .+.++.+.||.|..-=|-+-+.+++. .+++|++.+.--+-+|.
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisIGS~ 202 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIGSI 202 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEESSCCEEEEEE
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEECCccCeEeec
Confidence 34567 9999999998743 123333444 67889999999987777777776644 57899988644455553
Q ss_pred ------ceEEEeeeEEEEecCCCCCceEE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 ------AAVVLQNCNIYLRLPMSGQYNVI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 ------~~a~f~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
...+|+||++..... .-.| +.+||. +..-..+.|+|.++...
T Consensus 203 g~~~~v~nV~v~n~~~~~t~~----girIKt~~g~~-~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 203 ATGKHVSNVVIKGNTVTRSMY----GVRIKAQRTAT-SASVSGVTYDANTISGI 251 (335)
T ss_dssp CTTCEEEEEEEESCEEEEEEE----EEEEEEETTCC-SCEEEEEEEESCEEEEE
T ss_pred cCCCCEEEEEEEeeEEECCCc----eEEEEEeCCCC-cceEeeeEEEEEEEEcc
Confidence 135688888874321 1122 333432 12234677888888764
No 55
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=81.95 E-value=2 Score=48.49 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=66.7
Q ss_pred cccHHHHHHhCCCCCCCCCceEEEEEeCcEEe--EEEEEeecCCceEEEecCCCceEEeccccc-cCCccccccceEEEE
Q 044042 256 FSTINDAITAAPNNTDVTDGYFLIYIKEGVYQ--EYISIAKNKKILMMIGDGIGKTIITGDRNF-VDGWTTFNSATFAVM 332 (560)
Q Consensus 256 f~TIq~Ai~aap~~~~~~~~~~~I~I~~G~Y~--E~v~I~~~~~~itl~G~g~~~tiI~~~~~~-~~g~~t~~sat~~v~ 332 (560)
=..||+||+++..+ .+||+.+|+|+ ..|.||. ++.|+|++- .+|.+.... .|- . .....|.|-
T Consensus 417 T~Ai~~al~aa~~g-------~~v~~P~G~Y~vt~Ti~ip~---~~~ivG~~~--~~I~~~G~~F~d~-~-~P~pvv~VG 482 (758)
T 3eqn_A 417 TQAIKNVFAKYAGC-------KIIFFDAGTYIVTDTIQIPA---GTQIVGEVW--SVIMGTGSKFTDY-N-NPQPVIQVG 482 (758)
T ss_dssp HHHHHHHHHHHTTT-------SEEECCSEEEEESSCEEECT---TCEEECCSS--EEEEECSGGGCCT-T-SCEEEEEES
T ss_pred HHHHHHHHHHhcCC-------CEEEECCCEeEECCeEEcCC---CCEEEeccc--ceEecCCccccCC-C-CCeeeEEeC
Confidence 46899999977544 58999999998 5799984 899999984 566654321 111 1 123556662
Q ss_pred --e--CcEEEEEeeEeeCCCCCCCceeeeecC-------CCeEEEEEceec
Q 044042 333 --A--PNFVAVDISFRNTAGPSKHQAVALRSG-------ADLSTFYSCSFE 372 (560)
Q Consensus 333 --~--~~f~~~~lt~~Nt~g~~~~qAvAl~~~-------~d~~~~~~c~~~ 372 (560)
| ..+.+.+|.|. +.|+. .-|+.|... ...+.+.++.|+
T Consensus 483 ~~gd~G~veisdl~~~-t~g~~-~gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 483 APGSSGVVEITDMIFT-TRGPA-AGAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp CTTCBSCEEEESCEEE-ECSCC-TTEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred CCCCCCeEEEEeEEEE-ecCCC-CCcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 3 36899999987 33332 234555442 246788888887
No 56
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=81.70 E-value=4.6 Score=41.72 Aligned_cols=115 Identities=17% Similarity=0.228 Sum_probs=73.7
Q ss_pred EEEEeCcEEEEEeeEeeCCCCC--CCceeeeecC-CCeEEEEEceeccccceeeecCcce-eeeccEEEcceeeeecc--
Q 044042 329 FAVMAPNFVAVDISFRNTAGPS--KHQAVALRSG-ADLSTFYSCSFEGYQDSLYTHSQRQ-FYRECDIYGTIDFIFGN-- 402 (560)
Q Consensus 329 ~~v~~~~f~~~~lt~~Nt~g~~--~~qAvAl~~~-~d~~~~~~c~~~g~QDTL~~~~~r~-~~~~c~I~G~vDfIfG~-- 402 (560)
+.+..++++++|++|.+..+.. .+-.=++.+. +.++.+.||.|..--|-+.+.+++. .+++|++.+.--+-+|.
T Consensus 152 i~i~~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G 231 (362)
T 1czf_A 152 FSVQANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVG 231 (362)
T ss_dssp EEEECSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEEC
T ss_pred EEEeeCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeecc
Confidence 3334789999999999964310 1112246654 5899999999998888999988655 68999998755566654
Q ss_pred -------ceEEEeeeEEEEecCCCCCceEE-EecCCCCCCCCceEEEeeeEEeec
Q 044042 403 -------AAVVLQNCNIYLRLPMSGQYNVI-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 403 -------~~a~f~~c~i~~~~~~~~~~~~i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
....|+||++..... .-.| +.+|| ...-..+.|+|.++...
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~----GirIKt~~g~--~G~v~nI~~~ni~~~~v 280 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSEN----AVRIKTISGA--TGSVSEITYSNIVMSGI 280 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEE----EEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred ccCCCCEEEEEEEeeEEECCce----EEEEEEeCCC--CceEeeEEEEeEEEECc
Confidence 135688888864221 1122 23333 12234566777777654
No 57
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=81.69 E-value=14 Score=40.32 Aligned_cols=78 Identities=13% Similarity=0.011 Sum_probs=56.6
Q ss_pred Cc--EEEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEccee---eeecc-----c
Q 044042 334 PN--FVAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGTID---FIFGN-----A 403 (560)
Q Consensus 334 ~~--f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~vD---fIfG~-----~ 403 (560)
++ ++++|+++.+..++ +.-++.+. +++.+.||.|..-=|-+-+.+..-.+++|++.+... +-+|. -
T Consensus 318 ~ni~V~I~n~~i~~~~~~---NTDGidi~-~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~ 393 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYG---QTDGLEMY-PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTE 393 (549)
T ss_dssp GGEEEEEEEEEEECCCBT---TCCCCBCC-TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEECSSSCSEECCBSCCCEE
T ss_pred CCCeEEEEeeEeEcCCCC---CCCccccc-CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcCCCCceEEECCCCCcEE
Confidence 37 89999998875432 22356666 999999999998888888877667899999975332 23453 2
Q ss_pred eEEEeeeEEEEe
Q 044042 404 AVVLQNCNIYLR 415 (560)
Q Consensus 404 ~a~f~~c~i~~~ 415 (560)
...|+||+|...
T Consensus 394 NV~v~n~~i~~s 405 (549)
T 1x0c_A 394 NVLFDNVDVIHQ 405 (549)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEeeEEECc
Confidence 467899998753
No 58
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=81.30 E-value=4.2 Score=43.16 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=34.8
Q ss_pred CcccHHHHHHhCCCCCCCCCceEEEEEeCc----EEeE--EEEEeecCCceEEEecCCC
Q 044042 255 KFSTINDAITAAPNNTDVTDGYFLIYIKEG----VYQE--YISIAKNKKILMMIGDGIG 307 (560)
Q Consensus 255 ~f~TIq~Ai~aap~~~~~~~~~~~I~I~~G----~Y~E--~v~I~~~~~~itl~G~g~~ 307 (560)
+-..||+||+++... .+.-+|+|.+| +|.= .+.++. +++|.|++..
T Consensus 67 DTaAIQkAIdaA~a~----~GGGtVyVPaG~~~~tYlvt~tI~LkS---nV~L~Ge~~A 118 (514)
T 2vbk_A 67 NYQAIQNAIDAVASL----PSGGELFIPASNQAVGYIVGSTLLIPG---GVNIRGVGKA 118 (514)
T ss_dssp CHHHHHHHHHHHHTS----TTCEEEECCCCSSTTCEEESSCEEECT---TEEEECCSTT
T ss_pred cHHHHHHHHHHHhhc----CCCeEEEECCCCcceeEEECCeEEecC---CeEEEEecCc
Confidence 356899999988542 12368999999 8974 677753 8999999864
No 59
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=79.00 E-value=28 Score=36.93 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=61.4
Q ss_pred EeCcEEEEEeeEeeCCCCCCCceeeeecC-CCeEEEEEceeccccceeeecCc-------------ceeeeccEE---Ec
Q 044042 332 MAPNFVAVDISFRNTAGPSKHQAVALRSG-ADLSTFYSCSFEGYQDSLYTHSQ-------------RQFYRECDI---YG 394 (560)
Q Consensus 332 ~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~-~d~~~~~~c~~~g~QDTL~~~~~-------------r~~~~~c~I---~G 394 (560)
..++++++||+|.|.. + ... ++.+. +.++.+.||.|..-=|-+.+.++ .-.+++|++ .|
T Consensus 220 ~~~nv~i~~v~I~~~~-~-NtD--Gidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~g 295 (448)
T 3jur_A 220 LSENVIIRNIEISSTG-P-NND--GIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQAS 295 (448)
T ss_dssp SCEEEEEESCEEEECS-T-TCC--SBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSC
T ss_pred ccCCEEEEeEEEeecc-C-CCc--cccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCC
Confidence 4567888888888752 1 222 44444 57788888888876666666654 235678887 23
Q ss_pred ceeeeeccc------eEEEeeeEEEEecCCCCCceE-E-EecCCCCCCCCceEEEeeeEEeec
Q 044042 395 TIDFIFGNA------AVVLQNCNIYLRLPMSGQYNV-I-TAQGRTDPNQNTGISIHNCTFRAA 449 (560)
Q Consensus 395 ~vDfIfG~~------~a~f~~c~i~~~~~~~~~~~~-i-tA~gr~~~~~~~G~vf~~c~i~~~ 449 (560)
.--+.+|.. ..+|+||++... ..|. | |.++|. ..-..+.|+|.++...
T Consensus 296 h~gisiGS~~~~~v~nV~v~n~~~~~t-----~~GirIKt~~g~g--G~v~nI~f~ni~m~~v 351 (448)
T 3jur_A 296 HGGLVIGSEMSGGVRNVVARNNVYMNV-----ERALRLKTNSRRG--GYMENIFFIDNVAVNV 351 (448)
T ss_dssp SEEEEECSSCTTCEEEEEEESCEEESC-----SEEEEEECCTTTC--SEEEEEEEESCEEEEE
T ss_pred cceEEECCcccCcEEEEEEEEEEEecc-----cceEEEEEEcCCC--ceEeeEEEEEEEEECC
Confidence 323445542 457888888421 1222 2 223331 2233456777777654
No 60
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=69.39 E-value=7.1 Score=40.12 Aligned_cols=65 Identities=11% Similarity=0.280 Sum_probs=38.4
Q ss_pred cceeeecCc-ceeeeccEEEccee----eeeccceEEEeeeEEEEecCCCCCceEEEecCCCCC---CCCceEEEeeeEE
Q 044042 375 QDSLYTHSQ-RQFYRECDIYGTID----FIFGNAAVVLQNCNIYLRLPMSGQYNVITAQGRTDP---NQNTGISIHNCTF 446 (560)
Q Consensus 375 QDTL~~~~~-r~~~~~c~I~G~vD----fIfG~~~a~f~~c~i~~~~~~~~~~~~itA~gr~~~---~~~~G~vf~~c~i 446 (560)
-|.+.+... ..+..+|.|+-..| +..+.-...+++|.|.... ++++. |..+. +....+.|+++.|
T Consensus 150 ~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~-----k~~l~--G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 150 GDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHH-----KVMLL--GHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp CCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEE-----EEEEE--SCCSSCGGGGGCEEEEESCEE
T ss_pred CCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCC-----ceeEE--CCCCccccCCceEEEEEeeEE
Confidence 366666544 44688999985444 4446666789999987321 23332 32221 1123677888887
No 61
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=63.64 E-value=38 Score=35.48 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=39.3
Q ss_pred cceEEEE--eCcEEEEEeeEeeCCC-CCCCceeeee----------------cCCCeEEEEEceeccccce--eeecCcc
Q 044042 326 SATFAVM--APNFVAVDISFRNTAG-PSKHQAVALR----------------SGADLSTFYSCSFEGYQDS--LYTHSQR 384 (560)
Q Consensus 326 sat~~v~--~~~f~~~~lt~~Nt~g-~~~~qAvAl~----------------~~~d~~~~~~c~~~g~QDT--L~~~~~r 384 (560)
.|-+.|. ++.+.++|+.|++..- -.-++|-+++ -.++...+.+|.+...+|. +|++..
T Consensus 161 dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns- 239 (410)
T 2inu_A 161 KTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGNHMGAGPDGVTLLAENH- 239 (410)
T ss_dssp CEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEESSSEEEEECSCEESCEEESCEEECCTTSEEEEEESE-
T ss_pred ceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEEecCCceeeccccccceEecceeeecCCCCEEEEEeC-
Confidence 3556665 7789999999998741 1112222222 2234555667777777776 777643
Q ss_pred eeeeccEEEcc
Q 044042 385 QFYRECDIYGT 395 (560)
Q Consensus 385 ~~~~~c~I~G~ 395 (560)
.++.|+|+
T Consensus 240 ---~~~~I~~N 247 (410)
T 2inu_A 240 ---EGLLVTGN 247 (410)
T ss_dssp ---ESCEEESC
T ss_pred ---CCCEEECC
Confidence 46666665
No 62
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=62.89 E-value=1e+02 Score=34.92 Aligned_cols=19 Identities=5% Similarity=-0.022 Sum_probs=8.9
Q ss_pred CeEEEEEceeccccceeee
Q 044042 362 DLSTFYSCSFEGYQDSLYT 380 (560)
Q Consensus 362 d~~~~~~c~~~g~QDTL~~ 380 (560)
.++.++||.|.+.+-.|.+
T Consensus 234 ~NVtV~Nc~~~nT~nGIRI 252 (772)
T 3gqn_A 234 RHVVLSNNRSKGCYGGIEI 252 (772)
T ss_dssp EEEEEEEEEEESSSEEEEE
T ss_pred ccEEEEceEEECCCcEEEE
Confidence 3444455555444444444
No 63
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=58.22 E-value=1.9e+02 Score=31.86 Aligned_cols=98 Identities=7% Similarity=-0.030 Sum_probs=44.0
Q ss_pred EEEEEeecCCceEEEecCCCceEEeccccccCCccccccceEEEEeCcEEEEEeeEeeCCCCCCCceeeeecCCCeEEEE
Q 044042 288 EYISIAKNKKILMMIGDGIGKTIITGDRNFVDGWTTFNSATFAVMAPNFVAVDISFRNTAGPSKHQAVALRSGADLSTFY 367 (560)
Q Consensus 288 E~v~I~~~~~~itl~G~g~~~tiI~~~~~~~~g~~t~~sat~~v~~~~f~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~ 367 (560)
++|.|. +|++.--+.....|..... .||..... --|.+...++.++|.+|.|+. ..++|+. .+.++.|.
T Consensus 143 ~NV~I~----gVti~NSp~~gI~I~~~~~-NDGid~DG-i~fd~~S~NV~I~Nc~I~~tG----DDcIaIk-sseNI~I~ 211 (609)
T 3gq8_A 143 HNVYIR----DIEAVDCTLHGIDITCGGL-DYPYLGDG-TTAPNPSENIWIENCEATGFG----DDGITTH-HSQYINIL 211 (609)
T ss_dssp EEEEEE----EEEEESCSSCSEEEECSSS-SCCCCCTT-CCCSSCCEEEEEESCEEESCS----SCSEEEC-SCEEEEEE
T ss_pred ceEEEE----eeEEEeCCCCCeEEeCCCC-CccccCCC-ccccccceeEEEEeeEEEecC----CCEEEec-CCeeEEEE
Confidence 455554 4665554444455554322 13322111 011122345555555555442 3445552 35666666
Q ss_pred Eceeccc-----cceeeecC--cceeeeccEEEcce
Q 044042 368 SCSFEGY-----QDSLYTHS--QRQFYRECDIYGTI 396 (560)
Q Consensus 368 ~c~~~g~-----QDTL~~~~--~r~~~~~c~I~G~v 396 (560)
||.+.+- .-.+-+.. ...++++|+|.++.
T Consensus 212 Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~ 247 (609)
T 3gq8_A 212 NCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCY 247 (609)
T ss_dssp SCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSS
T ss_pred eEEEECCCCCCCcccEEccCCcccEEEEeeEEECCC
Confidence 6666321 12232222 23356666666544
No 64
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=57.78 E-value=66 Score=35.20 Aligned_cols=80 Identities=10% Similarity=-0.035 Sum_probs=55.2
Q ss_pred EeCcE--EEEEeeEeeCCCCCCCceeeeecCCCeEEEEEceeccccceeeecCcceeeeccEEEccee---eeecc----
Q 044042 332 MAPNF--VAVDISFRNTAGPSKHQAVALRSGADLSTFYSCSFEGYQDSLYTHSQRQFYRECDIYGTID---FIFGN---- 402 (560)
Q Consensus 332 ~~~~f--~~~~lt~~Nt~g~~~~qAvAl~~~~d~~~~~~c~~~g~QDTL~~~~~r~~~~~c~I~G~vD---fIfG~---- 402 (560)
..+++ +++|+++.+..+. +.=++.+. .++.+.||.|...=|-+-+.+..-.+++|++.+.-. .-+|.
T Consensus 354 ~c~nV~~~I~nv~i~~~~~~---nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~ 429 (574)
T 1ogo_X 354 GNSGISSQISDYKQVGAFFF---QTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRD 429 (574)
T ss_dssp SSSCEEEEEEEEEEECCCST---TCCCCBCC-TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCC
T ss_pred CCCChhhEEEeeEeeCCCCC---CCccCccc-CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCCCCceEEEcCCCCc
Confidence 35677 8999988764332 12346666 889999999998888887777667889998874221 22342
Q ss_pred -ceEEEeeeEEEEe
Q 044042 403 -AAVVLQNCNIYLR 415 (560)
Q Consensus 403 -~~a~f~~c~i~~~ 415 (560)
-...|+||++...
T Consensus 430 V~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 430 ISGVTIDTLNVIHT 443 (574)
T ss_dssp EEEEEEEEEEEEEC
T ss_pred EEEEEEEeEEEECC
Confidence 3467999998754
No 65
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=56.07 E-value=39 Score=36.41 Aligned_cols=95 Identities=7% Similarity=0.027 Sum_probs=55.7
Q ss_pred eeecCCCeEEEEEceecccccee-----------eecCcceeeeccEEEcceee----ee--------ccceEEEeeeEE
Q 044042 356 ALRSGADLSTFYSCSFEGYQDSL-----------YTHSQRQFYRECDIYGTIDF----IF--------GNAAVVLQNCNI 412 (560)
Q Consensus 356 Al~~~~d~~~~~~c~~~g~QDTL-----------~~~~~r~~~~~c~I~G~vDf----If--------G~~~a~f~~c~i 412 (560)
.|++.++.+.++++.|.+....+ ++.+.+.-+++|.|.|.-+- |- ......+++|.|
T Consensus 88 ~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I 167 (506)
T 1dbg_A 88 KVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSF 167 (506)
T ss_dssp EEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEE
T ss_pred eEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEE
Confidence 57778899999999998764322 33334556889999875322 21 223457999999
Q ss_pred EEecCCCCCc-e--EEEecCCC-CCCCCceEEEeeeEEeecc
Q 044042 413 YLRLPMSGQY-N--VITAQGRT-DPNQNTGISIHNCTFRAAD 450 (560)
Q Consensus 413 ~~~~~~~~~~-~--~itA~gr~-~~~~~~G~vf~~c~i~~~~ 450 (560)
.-.....-.- + .|...+-. .-.+..+.+|++|.|...+
T Consensus 168 ~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~ 209 (506)
T 1dbg_A 168 TDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQ 209 (506)
T ss_dssp ECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECC
T ss_pred ECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccc
Confidence 8643211000 0 22222100 0023457899999998754
No 66
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=52.08 E-value=0.69 Score=49.22 Aligned_cols=94 Identities=16% Similarity=0.069 Sum_probs=67.7
Q ss_pred EEcCCCCCCcccHHHHHHhCCCCCCCCCc---eEEEEEeCcEEeEEEEEeecCCceEEEecCC---CceEEeccccccCC
Q 044042 247 TVSQDGKAKFSTINDAITAAPNNTDVTDG---YFLIYIKEGVYQEYISIAKNKKILMMIGDGI---GKTIITGDRNFVDG 320 (560)
Q Consensus 247 ~V~~dg~g~f~TIq~Ai~aap~~~~~~~~---~~~I~I~~G~Y~E~v~I~~~~~~itl~G~g~---~~tiI~~~~~~~~g 320 (560)
.|+.+..|.+ +|+|.+.++-.++...+ ...+-|++|+|+|+|.|+.+++++++.|-+. +.|.|+++..
T Consensus 295 ~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 368 (432)
T 1vcl_A 295 MVGCDQNGKV--SQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCD---- 368 (432)
T ss_dssp EEEEETTSCC--EEEECCEEECSSCCCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECC----
T ss_pred ccccCCCCcE--EEeccceEEEeccccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecC----
Confidence 3444555655 47777776654321110 1267899999999999999999999988653 3488998753
Q ss_pred ccccccceEEEEeCcEEEEEeeEeeCCC
Q 044042 321 WTTFNSATFAVMAPNFVAVDISFRNTAG 348 (560)
Q Consensus 321 ~~t~~sat~~v~~~~f~~~~lt~~Nt~g 348 (560)
.+.++++.++|-.|++++-|-|--++
T Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
T 1vcl_A 369 --NYDSDEEFTRGCMWQLAIETTEVKSG 394 (432)
T ss_dssp --BCTTSSBCSSEEEEEEEEEEEETTTT
T ss_pred --CCcccChhhccceEEEeeeeeecccC
Confidence 35678999999999999998876554
No 67
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=31.88 E-value=1.7e+02 Score=30.95 Aligned_cols=79 Identities=19% Similarity=0.152 Sum_probs=52.4
Q ss_pred EEEeCcEEEEEeeEeeCCCCCCCceee-ee-cCCCeEEEEEceeccccceeeecCc-------------ceeeeccEEEc
Q 044042 330 AVMAPNFVAVDISFRNTAGPSKHQAVA-LR-SGADLSTFYSCSFEGYQDSLYTHSQ-------------RQFYRECDIYG 394 (560)
Q Consensus 330 ~v~~~~f~~~~lt~~Nt~g~~~~qAvA-l~-~~~d~~~~~~c~~~g~QDTL~~~~~-------------r~~~~~c~I~G 394 (560)
.+..++++++|++|.|... .++ .. ....++.+.||.|.| ...|....+ .-.|+||++++
T Consensus 171 ~i~s~nV~I~n~~I~~gdd-----giGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~n 244 (464)
T 1h80_A 171 LHWSRNGIIERIKQNNALF-----GYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSK 244 (464)
T ss_dssp EEEEEEEEEEEEEEESCCT-----TCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEES
T ss_pred eeeccCEEEeceEEecCCC-----eEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEEC
Confidence 4567788888888887632 223 22 235789999999999 777766543 23799999987
Q ss_pred cee-eeecc-----ceEEEeeeEEEE
Q 044042 395 TID-FIFGN-----AAVVLQNCNIYL 414 (560)
Q Consensus 395 ~vD-fIfG~-----~~a~f~~c~i~~ 414 (560)
.-- ++++. ....|+|.+...
T Consensus 245 v~~~I~I~p~~~~isnItfeNI~~t~ 270 (464)
T 1h80_A 245 GLAAVMFGPHFMKNGDVQVTNVSSVS 270 (464)
T ss_dssp SSEEEEEECTTCBCCCEEEEEEEEES
T ss_pred CceeEEEeCCCceEeEEEEEEEEEEc
Confidence 432 44442 346677766653
No 68
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=29.78 E-value=1.7e+02 Score=24.10 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Q 044042 86 TLSTAAIRALEDCNSLTDLNVDYLSSCFQTLN 117 (560)
Q Consensus 86 ~~~~~~k~AL~DC~el~~davd~L~~S~~~l~ 117 (560)
.++..+..|++.|++-|-++-..+.+.+..+.
T Consensus 55 ~L~~~E~~Ci~~Cv~Ky~d~~~~V~~~~q~~~ 86 (95)
T 3dxr_B 55 ELNKNESSCLDRCVAKYFETNVQVGENMQKMG 86 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999888765
No 69
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=20.40 E-value=1.5e+02 Score=30.26 Aligned_cols=57 Identities=12% Similarity=0.063 Sum_probs=35.2
Q ss_pred eec--CCCeEEEEEceeccc-------cceeeecCc-ceeeeccEEEcceeeee-----ccceEEEeeeEEE
Q 044042 357 LRS--GADLSTFYSCSFEGY-------QDSLYTHSQ-RQFYRECDIYGTIDFIF-----GNAAVVLQNCNIY 413 (560)
Q Consensus 357 l~~--~~d~~~~~~c~~~g~-------QDTL~~~~~-r~~~~~c~I~G~vDfIf-----G~~~a~f~~c~i~ 413 (560)
|++ .+++++++|.+|..- -|.+.+... +.++.+|.++...|=.+ +.....+++|.|.
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 555 678888888888742 166666543 33677787775444222 3345667777776
Done!