Query 044043
Match_columns 428
No_of_seqs 242 out of 828
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 10:56:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044043.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044043hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2458 Endoplasmic reticulum 100.0 6E-128 1E-132 966.7 28.9 404 18-426 124-528 (528)
2 PF05686 Glyco_transf_90: Glyc 100.0 8E-118 2E-122 913.3 34.1 395 23-418 1-395 (395)
3 smart00672 CAP10 Putative lipo 100.0 1.7E-69 3.6E-74 525.9 21.9 248 99-348 1-256 (256)
4 PF13524 Glyco_trans_1_2: Glyc 97.8 0.00012 2.5E-09 59.6 9.0 82 247-334 9-90 (92)
5 PRK10307 putative glycosyl tra 78.3 12 0.00027 38.2 9.3 85 249-340 320-407 (412)
6 COG4641 Uncharacterized protei 75.5 14 0.0003 38.3 8.4 73 248-326 275-347 (373)
7 cd03801 GT1_YqgM_like This fam 74.9 19 0.00042 34.2 9.1 84 247-335 286-370 (374)
8 PRK15427 colanic acid biosynth 74.3 21 0.00046 37.0 9.8 88 248-339 316-404 (406)
9 cd04962 GT1_like_5 This family 70.9 28 0.00062 34.3 9.6 85 251-339 285-369 (371)
10 cd05844 GT1_like_7 Glycosyltra 68.9 23 0.00049 35.0 8.3 82 249-334 283-364 (367)
11 cd03808 GT1_cap1E_like This fa 67.2 36 0.00079 32.4 9.2 81 248-332 275-355 (359)
12 cd03822 GT1_ecORF704_like This 66.4 40 0.00087 32.6 9.4 78 248-331 281-358 (366)
13 TIGR03088 stp2 sugar transfera 65.7 49 0.0011 33.0 10.1 85 249-338 285-370 (374)
14 PRK15484 lipopolysaccharide 1, 64.9 27 0.00058 35.7 8.1 85 252-341 293-378 (380)
15 TIGR03087 stp1 sugar transfera 64.9 38 0.00082 34.5 9.3 83 248-338 310-394 (397)
16 cd03794 GT1_wbuB_like This fam 64.7 30 0.00064 33.4 8.1 79 248-331 311-390 (394)
17 cd03807 GT1_WbnK_like This fam 64.6 44 0.00096 31.9 9.2 78 248-332 280-358 (365)
18 TIGR02472 sucr_P_syn_N sucrose 64.0 25 0.00054 36.7 7.8 82 252-338 356-438 (439)
19 cd03818 GT1_ExpC_like This fam 61.9 49 0.0011 33.6 9.4 76 251-330 315-390 (396)
20 cd03795 GT1_like_4 This family 61.6 28 0.0006 33.9 7.3 79 248-330 277-356 (357)
21 PF00534 Glycos_transf_1: Glyc 60.8 40 0.00086 29.5 7.5 70 247-320 103-172 (172)
22 TIGR02149 glgA_Coryne glycogen 58.3 82 0.0018 31.4 10.2 76 254-333 298-379 (388)
23 cd03825 GT1_wcfI_like This fam 57.3 84 0.0018 30.6 9.9 79 249-332 277-356 (365)
24 cd03817 GT1_UGDG_like This fam 55.5 79 0.0017 30.3 9.3 73 248-325 290-362 (374)
25 PF03016 Exostosin: Exostosin 55.1 64 0.0014 31.3 8.6 127 139-285 151-284 (302)
26 cd04955 GT1_like_6 This family 54.3 54 0.0012 32.0 8.0 80 248-335 280-359 (363)
27 PRK05749 3-deoxy-D-manno-octul 53.6 26 0.00056 36.2 5.7 68 253-324 337-406 (425)
28 cd03799 GT1_amsK_like This is 53.5 62 0.0013 31.4 8.2 79 248-330 273-351 (355)
29 cd03792 GT1_Trehalose_phosphor 49.7 1.4E+02 0.003 29.9 10.3 82 250-337 287-368 (372)
30 cd03821 GT1_Bme6_like This fam 45.3 1.2E+02 0.0027 28.9 8.8 77 248-331 293-370 (375)
31 cd03805 GT1_ALG2_like This fam 43.0 73 0.0016 31.8 7.0 80 245-331 310-389 (392)
32 cd03823 GT1_ExpE7_like This fa 40.4 1.4E+02 0.0029 28.6 8.2 73 247-323 274-346 (359)
33 cd03798 GT1_wlbH_like This fam 39.9 1.4E+02 0.003 28.3 8.2 85 248-338 290-374 (377)
34 cd04946 GT1_AmsK_like This fam 38.4 1.5E+02 0.0033 30.5 8.7 80 249-331 323-402 (407)
35 TIGR03449 mycothiol_MshA UDP-N 38.0 2.5E+02 0.0055 28.2 10.1 81 249-334 315-395 (405)
36 cd03814 GT1_like_2 This family 34.6 2E+02 0.0043 27.6 8.4 78 248-330 278-355 (364)
37 cd03813 GT1_like_3 This family 33.2 2.7E+02 0.0058 29.4 9.7 81 249-331 383-467 (475)
38 cd03800 GT1_Sucrose_synthase T 32.7 2E+02 0.0044 28.3 8.3 77 252-332 318-394 (398)
39 cd03816 GT1_ALG1_like This fam 32.1 1.2E+02 0.0025 31.4 6.6 75 246-326 327-404 (415)
40 cd03819 GT1_WavL_like This fam 31.2 1.6E+02 0.0034 28.7 7.1 76 248-328 276-353 (355)
41 cd03809 GT1_mtfB_like This fam 28.1 1.6E+02 0.0035 28.2 6.6 75 249-330 285-359 (365)
42 PLN02871 UDP-sulfoquinovose:DA 27.9 3.3E+02 0.0072 28.4 9.3 35 293-328 387-421 (465)
43 cd03820 GT1_amsD_like This fam 25.6 3.6E+02 0.0078 25.2 8.3 79 248-331 264-343 (348)
44 cd04951 GT1_WbdM_like This fam 25.5 3.9E+02 0.0084 25.8 8.7 84 248-338 274-358 (360)
45 cd03796 GT1_PIG-A_like This fa 25.2 3.6E+02 0.0079 27.3 8.8 87 249-345 282-369 (398)
46 TIGR02470 sucr_synth sucrose s 23.6 3.3E+02 0.0071 31.3 8.6 80 255-338 662-745 (784)
No 1
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00 E-value=6.1e-128 Score=966.72 Aligned_cols=404 Identities=59% Similarity=1.180 Sum_probs=394.3
Q ss_pred CCCCCCCCCCCcchhhHHhhhhchhhCCCCHHHHHHHhhcCeEEEEEECCEEEEeccccccccchhhHHHHHHHHHHhcC
Q 044043 18 SSSEESLGECPEYFRWIHKDLEPWKHTGISREMLERAKAHAQFRLVIINGDAYVEKYKNAYQTRDVFTVWGILQLLRLYP 97 (428)
Q Consensus 18 ~~~~~~~~~C~~~f~~I~~DL~pw~~~GIt~~~l~~a~~~~~~rv~I~~G~lyv~~~~~~~~sR~~~t~~~l~~ll~~~~ 97 (428)
.+...+..+|||||+|||+||.||+++|||++++++|++.+++|++|++|++||+.|+.++|+|++||+|||+|||++||
T Consensus 124 ~~~~~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI~~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~yp 203 (528)
T KOG2458|consen 124 NPVYHESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVIKEGRLYVENYRKSIQTRDVFTIWGILQLLRTYP 203 (528)
T ss_pred CCCCCCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeeeecCceehhhhhhhhcccchHHHHHHHHHHHhcC
Confidence 34446677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEecCCccceeccCCCCCCCCCCCCeEEecCCCCCCceecCCCCcccccccCccchHHHHHHHHcccCCCCc
Q 044043 98 GKVPDLELMFSCGDRPVVKKRDYEGANSTSPPPVFHYCGDQESLDIVFPDWSFWGWAETNIRPWNSILEDIKEGNKRTKW 177 (428)
Q Consensus 98 ~~LPDvef~~n~~D~P~v~~~~~~G~~~~~~~Plfs~ck~~~~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW 177 (428)
|+|||+||||||+|+|.|.+.+|+| . .+|+|||+||++.++.||+||||+||||+|.||++|+.+...+.+++.+.+|
T Consensus 204 gklPDlElmf~~~D~P~v~~~~~~~-~-~~ppPlF~yCg~~~s~DIVfPdwsfwgw~e~nik~w~~~~~~~~egn~~~~W 281 (528)
T KOG2458|consen 204 GKLPDLELMFNCGDWPLVRKKDFQG-T-PPPPPLFSYCGSSESLDIVFPDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKW 281 (528)
T ss_pred CCCCCceeeeecCCccccchhhccC-C-CCCCCeEeecCCcccccccccCccccCChhhcccccchHHHHHHhhccCCCc
Confidence 9999999999999999999999987 3 3799999999999999999999999999999999999999999999999999
Q ss_pred ccccCcEEEeeCCCCc-hhHHHHHHhhccCCCccccceeecccchhhccCCcccchhhhccceEEEeecCcccchhhHHH
Q 044043 178 INRAPYAYWKGNPYVS-IAREDLMKCNVTDKYQWKTRLYVQDWHKEKKQGFEKSKLADQCTHRYKIYVEGQAWSVSEKYI 256 (428)
Q Consensus 178 ~~K~p~afWRG~~t~~-~~R~~Lv~~~~s~~~~~~a~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~idG~~~S~rlk~l 256 (428)
.+|.++|||||++++. +.|..|++||++.-.+|+++++.|+|.+|++.||+.+++++||+|||+|||||.+||+|+|||
T Consensus 282 ~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYi 361 (528)
T KOG2458|consen 282 KNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESKLGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYI 361 (528)
T ss_pred ccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhhccccccchhhhcceeeEEEEeeeeeeeeccee
Confidence 9999999999999987 899999999999888999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhHHHHHHH
Q 044043 257 LACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYVYDYMFH 336 (428)
Q Consensus 257 L~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~~~Y~~~ 336 (428)
|+|+||||++++.|+|||+++|.||+|||||+.+ |+||++||+|+++|+++||.||++|++|+++.|.|++|||||||
T Consensus 362 lacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn~h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfh 439 (528)
T KOG2458|consen 362 LACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGNNHDEEAQKIGKEGSEFARKNLKMDYVYDYMFH 439 (528)
T ss_pred eecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhcccChHHHHHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 9999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCeeecccccccccCccccchhhhccccCCCCCCCCCCCCCCChhHHHHHHHhhHHHHHHHHH
Q 044043 337 LLIEYAKLLKFEPRIPNEGKKVCAQKLASSQNGLGKRFMVESMVNSSSETLPCTMPPPFEPLSLEAFFENNEMIKRQVEM 416 (428)
Q Consensus 337 LL~eYa~L~~~~P~~~~~~~e~~~e~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (428)
||+|||+||+|||++|+||+|||+|+|+|+++|++|+||+||+|+ ||.+.||.|||||++.+|++|++||+++++|||+
T Consensus 440 llqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-ps~~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~ 518 (528)
T KOG2458|consen 440 LLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-PSDTAPCEMPPPYDPNELKEFLEKKESTTRQVEK 518 (528)
T ss_pred HHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-ccccCcccCCCCCCcHHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHhhhhhhc
Q 044043 417 REKDSWESLK 426 (428)
Q Consensus 417 ~~~~~~~~~~ 426 (428)
||++||++|+
T Consensus 519 we~~y~~~~~ 528 (528)
T KOG2458|consen 519 WENKYWQKQN 528 (528)
T ss_pred HHHHHHhccC
Confidence 9999999985
No 2
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00 E-value=7.9e-118 Score=913.28 Aligned_cols=395 Identities=49% Similarity=1.006 Sum_probs=381.5
Q ss_pred CCCCCCcchhhHHhhhhchhhCCCCHHHHHHHhhcCeEEEEEECCEEEEeccccccccchhhHHHHHHHHHHhcCCCCCC
Q 044043 23 SLGECPEYFRWIHKDLEPWKHTGISREMLERAKAHAQFRLVIINGDAYVEKYKNAYQTRDVFTVWGILQLLRLYPGKVPD 102 (428)
Q Consensus 23 ~~~~C~~~f~~I~~DL~pw~~~GIt~~~l~~a~~~~~~rv~I~~G~lyv~~~~~~~~sR~~~t~~~l~~ll~~~~~~LPD 102 (428)
++.+||++|++|++||+||+++|||+++|+++++.+++|++|+||||||+.+++++++|++||+|+|+++++++|++|||
T Consensus 1 ~~~~cp~~f~~I~~dl~~w~~~gIt~~~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD 80 (395)
T PF05686_consen 1 SNSQCPDYFRQIHRDLAPWRETGITREMLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPD 80 (395)
T ss_pred CCCCCCccHHHHHHHHHHhhcCCCCHHHHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCC
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccceeccCCCCCCCCCCCCeEEecCCCCCCceecCCCCcccccccCccchHHHHHHHHcccCCCCcccccC
Q 044043 103 LELMFSCGDRPVVKKRDYEGANSTSPPPVFHYCGDQESLDIVFPDWSFWGWAETNIRPWNSILEDIKEGNKRTKWINRAP 182 (428)
Q Consensus 103 vef~~n~~D~P~v~~~~~~G~~~~~~~Plfs~ck~~~~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW~~K~p 182 (428)
|||+||++|+|.+.+.++.|.+. +++|||++|++.++.|||||||+|||||+++|++|+..+..+.+++..+||++|+|
T Consensus 81 ~Ef~~n~~D~P~~~~~~~~~~~~-~~~Pifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p 159 (395)
T PF05686_consen 81 VEFMFNCDDWPVVRKDDYQGPSA-PPPPIFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKP 159 (395)
T ss_pred eeEEeECCCCccccccccCCCCc-chhhheeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhccc
Confidence 99999999999998877665443 68999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeCCCCchhHHHHHHhhccCCCccccceeecccchhhccCCcccchhhhccceEEEeecCcccchhhHHHHhcCCe
Q 044043 183 YAYWKGNPYVSIAREDLMKCNVTDKYQWKTRLYVQDWHKEKKQGFEKSKLADQCTHRYKIYVEGQAWSVSEKYILACDSM 262 (428)
Q Consensus 183 ~afWRG~~t~~~~R~~Lv~~~~s~~~~~~a~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~idG~~~S~rlk~lL~~~Sv 262 (428)
+|||||+++++..|++|++|+++++..|+|+++.++|..+...+++.+++++||+|||+|++||++||+||||||+||||
T Consensus 160 ~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~Sv 239 (395)
T PF05686_consen 160 KAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSV 239 (395)
T ss_pred ceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCce
Confidence 99999999988889999999988888999999999998777788889999999999999999999999999999999999
Q ss_pred eeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 044043 263 TLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYVYDYMFHLLIEYA 342 (428)
Q Consensus 263 vl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~~~Y~~~LL~eYa 342 (428)
||++++.|+|||+++|+||+|||||+.+.+|+||+++|+|+++||++|++||++|++|++++|++++++|||++||+|||
T Consensus 240 Vl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 240 VLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred EEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999954599999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCeeecccccccccCccccchhhhccccCCCCCCCCCCCCCCChhHHHHHHHhhHHHHHHHHHHH
Q 044043 343 KLLKFEPRIPNEGKKVCAQKLASSQNGLGKRFMVESMVNSSSETLPCTMPPPFEPLSLEAFFENNEMIKRQVEMRE 418 (428)
Q Consensus 343 ~L~~~~P~~~~~~~e~~~e~~~c~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (428)
+|++|+|+++++++|||+|+|+|.++|.+++||+||+|++|+++.||+|||||+|++|++|++||+|+++|||+||
T Consensus 320 ~l~~~~p~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (395)
T PF05686_consen 320 KLLRFKPTVPPGAEEVCPESMACPAEGRERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE 395 (395)
T ss_pred HHhCCCCcCCCCceEechhhcCCCcccchhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=100.00 E-value=1.7e-69 Score=525.91 Aligned_cols=248 Identities=55% Similarity=1.127 Sum_probs=229.3
Q ss_pred CCCCeEEEEecCCccceeccCCCCCCCCCCCCeEEecCCCCCCceecCCCCcc-cccccCccchHHHHHHHHcccCCCCc
Q 044043 99 KVPDLELMFSCGDRPVVKKRDYEGANSTSPPPVFHYCGDQESLDIVFPDWSFW-GWAETNIRPWNSILEDIKEGNKRTKW 177 (428)
Q Consensus 99 ~LPDvef~~n~~D~P~v~~~~~~G~~~~~~~Plfs~ck~~~~~DIl~Pd~~fw-~wpe~~i~~w~~~~~~i~~~~~~~pW 177 (428)
+|||+||+||++|+|.+.+..+.+.....++||||+||.+++.|||||+|+|| |||+.++++|+..+.++.+++..+||
T Consensus 1 ~lPD~ef~~n~~D~p~~~~~~~~~~~~~~~~Pifs~~k~~~~~DIl~P~~~~w~~w~~~~~~~~~~~~~~~~~~~~~~pW 80 (256)
T smart00672 1 RVPDLELMFNCRDWPLINKKSFASYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAGWPEVNGRPWDKDLMELEEGNKRTKW 80 (256)
T ss_pred CCCCeeeeeeCCCccccccCCCCCcccCCCCCeEEecCCCCCCceEecCHHHhCCCccccCcchHHHHHHHHhhhcCCCc
Confidence 58999999999999999876543322346899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCcEEEeeCCCCchhHHHHHHhhccCCCccccceeecccc-----hhhccCCcccchhhhccceEEEeecCcccchh
Q 044043 178 INRAPYAYWKGNPYVSIAREDLMKCNVTDKYQWKTRLYVQDWH-----KEKKQGFEKSKLADQCTHRYKIYVEGQAWSVS 252 (428)
Q Consensus 178 ~~K~p~afWRG~~t~~~~R~~Lv~~~~s~~~~~~a~v~~~~w~-----~~~~~g~~~~~l~~~~~yKYli~idG~~~S~r 252 (428)
++|+++|||||+++++.+|++|++++++++..|+|+++.++|. .+...+++.+++++||+|||+|++||++||+|
T Consensus 81 ~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~r 160 (256)
T smart00672 81 SDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVR 160 (256)
T ss_pred cccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhh
Confidence 9999999999999977799999999988888899999888874 23345667799999999999999999999999
Q ss_pred hHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCccc--HHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 253 EKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRD--IKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 253 lk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~d--L~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
|+++|+||||||++++.|+|||++.|+||+|||||+.+ ++| |+++|+|+++||++||+||+||++|++++|+++++
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d--~sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~ 238 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSD--LSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDV 238 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCC--CchhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999998 566 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCC
Q 044043 331 YDYMFHLLIEYAKLLKFE 348 (428)
Q Consensus 331 ~~Y~~~LL~eYa~L~~~~ 348 (428)
+|||++||+|||+|++|+
T Consensus 239 ~~Y~~~ll~eya~l~~~~ 256 (256)
T smart00672 239 YDYMFHLLQEYAKLLKYK 256 (256)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999999986
No 4
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.84 E-value=0.00012 Score=59.61 Aligned_cols=82 Identities=7% Similarity=0.044 Sum_probs=69.5
Q ss_pred cccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 247 QAWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 247 ~~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
.+.+.|+--.|+||++||...+ .-+...+.++.|++-++ + .+++.++++++.+||++.++||++|++++++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~-~--~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t 82 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN-D--PEELAEKIEYLLENPEERRRIAKNARERVLKRHT 82 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC-C--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCC
Confidence 4567788899999999998755 44445588889999998 4 5899999999999999999999999999999998
Q ss_pred hhhHHHHH
Q 044043 327 MKYVYDYM 334 (428)
Q Consensus 327 ~~~~~~Y~ 334 (428)
-+.+..++
T Consensus 83 ~~~~~~~i 90 (92)
T PF13524_consen 83 WEHRAEQI 90 (92)
T ss_pred HHHHHHHH
Confidence 87766654
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=78.26 E-value=12 Score=38.22 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=58.5
Q ss_pred cchhhHHHHhcCCeeeeecCc---chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHh
Q 044043 249 WSVSEKYILACDSMTLLIEPK---YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKL 325 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~---~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L 325 (428)
.+..+--.|+||-.|+..... ..|... ..-++ +..++ .++|.++|..+.++++..++++++|++++.+.+
T Consensus 320 ~p~kl~eama~G~PVi~s~~~g~~~~~~i~-----~~G~~-~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~f 392 (412)
T PRK10307 320 LPSKLTNMLASGRNVVATAEPGTELGQLVE-----GIGVC-VEPES-VEALVAAIAALARQALLRPKLGTVAREYAERTL 392 (412)
T ss_pred CcHHHHHHHHcCCCEEEEeCCCchHHHHHh-----CCcEE-eCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHc
Confidence 344455568999988876432 122221 21222 33222 578999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHH
Q 044043 326 KMKYVYDYMFHLLIE 340 (428)
Q Consensus 326 ~~~~~~~Y~~~LL~e 340 (428)
+.+.+..-+..++++
T Consensus 393 s~~~~~~~~~~~~~~ 407 (412)
T PRK10307 393 DKENVLRQFIADIRG 407 (412)
T ss_pred CHHHHHHHHHHHHHH
Confidence 988877666555543
No 6
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.45 E-value=14 Score=38.26 Aligned_cols=73 Identities=11% Similarity=0.175 Sum_probs=58.0
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+.+.|.--+++|+...+ |.|.+-....++|+.-.+--. | ..|+.++++++.+|++++++||+.|-+=+...-+
T Consensus 275 ~~~~RvFeiagc~~~li---T~~~~~~e~~f~pgk~~iv~~-d--~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht 347 (373)
T COG4641 275 SPTNRVFEIAGCGGFLI---TDYWKDLEKFFKPGKDIIVYQ-D--SKDLKEKLKYLLNHPDERKEIAECAYERVLARHT 347 (373)
T ss_pred CchhhHHHHhhcCCccc---cccHHHHHHhcCCchheEEec-C--HHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhcc
Confidence 45788889999999444 557777777888888887444 4 4899999999999999999999999876654433
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=74.88 E-value=19 Score=34.16 Aligned_cols=84 Identities=10% Similarity=-0.018 Sum_probs=59.4
Q ss_pred cccchhhHHHHhcCCeeeeecC-cchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHh
Q 044043 247 QAWSVSEKYILACDSMTLLIEP-KYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKL 325 (428)
Q Consensus 247 ~~~S~rlk~lL~~~Svvl~~~s-~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L 325 (428)
.+++..+--.|+||-.|+..+. .+.++ +....+-+-+..++ .+++.+++..+..+++..+++++++++.+.+.+
T Consensus 286 ~~~~~~~~Ea~~~g~pvI~~~~~~~~~~----~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03801 286 EGFGLVLLEAMAAGLPVVASDVGGIPEV----VEDGETGLLVPPGD-PEALAEAILRLLDDPELRRRLGEAARERVAERF 360 (374)
T ss_pred ccccchHHHHHHcCCcEEEeCCCChhHH----hcCCcceEEeCCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhc
Confidence 3556667777899998887763 23333 33233433344432 578999999999999999999999999998999
Q ss_pred ChhhHHHHHH
Q 044043 326 KMKYVYDYMF 335 (428)
Q Consensus 326 ~~~~~~~Y~~ 335 (428)
+.+.+..=+.
T Consensus 361 ~~~~~~~~~~ 370 (374)
T cd03801 361 SWDRVAARTE 370 (374)
T ss_pred CHHHHHHHHH
Confidence 8877654333
No 8
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=74.29 E-value=21 Score=36.95 Aligned_cols=88 Identities=8% Similarity=0.008 Sum_probs=62.7
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhc-cHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNT-HTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~-h~~~A~~IA~~g~~fa~~~L~ 326 (428)
++...+.--|+||-.|+..+.. -..+.+..+.+-+=+..++ .++|.++|..+.+ ++++.++++++|++++.+..+
T Consensus 316 g~p~~llEAma~G~PVI~t~~~---g~~E~v~~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~ 391 (406)
T PRK15427 316 GIPVALMEAMAVGIPVVSTLHS---GIPELVEADKSGWLVPEND-AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFN 391 (406)
T ss_pred CccHHHHHHHhCCCCEEEeCCC---CchhhhcCCCceEEeCCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC
Confidence 3455666789999988875432 1223344555544344332 6889999999988 999999999999999999999
Q ss_pred hhhHHHHHHHHHH
Q 044043 327 MKYVYDYMFHLLI 339 (428)
Q Consensus 327 ~~~~~~Y~~~LL~ 339 (428)
.+.+..=+.+++.
T Consensus 392 ~~~~~~~l~~~~~ 404 (406)
T PRK15427 392 QQVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 8877665555554
No 9
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=70.93 E-value=28 Score=34.33 Aligned_cols=85 Identities=8% Similarity=-0.035 Sum_probs=58.8
Q ss_pred hhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 251 VSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 251 ~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
..+---|+||-.|+..+... ..+.+..+..-+-++.++ .+++..++..+.++++..+++++++++++.+..+.+.+
T Consensus 285 ~~~~EAma~g~PvI~s~~~~---~~e~i~~~~~G~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~ 360 (371)
T cd04962 285 LAALEAMACGVPVVASNAGG---IPEVVKHGETGFLVDVGD-VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERI 360 (371)
T ss_pred cHHHHHHHcCCCEEEeCCCC---chhhhcCCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 34556688888777654321 233444444433344432 57899999999899999999999999999889998877
Q ss_pred HHHHHHHHH
Q 044043 331 YDYMFHLLI 339 (428)
Q Consensus 331 ~~Y~~~LL~ 339 (428)
..-+..+++
T Consensus 361 ~~~~~~~y~ 369 (371)
T cd04962 361 VPQYEALYR 369 (371)
T ss_pred HHHHHHHHH
Confidence 665555543
No 10
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=68.91 E-value=23 Score=34.97 Aligned_cols=82 Identities=11% Similarity=0.013 Sum_probs=57.6
Q ss_pred cchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChh
Q 044043 249 WSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMK 328 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~ 328 (428)
++..+--.|+||-.|+..+..- ..+.+.....-+-+..++ .++|.++|..+.++++..++++++|++++.+.++.+
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHGG---IPEAVEDGETGLLVPEGD-VAALAAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCCC---chhheecCCeeEEECCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 4555667789999888665321 223334444433344332 578999999999999999999999999999999887
Q ss_pred hHHHHH
Q 044043 329 YVYDYM 334 (428)
Q Consensus 329 ~~~~Y~ 334 (428)
.+..-+
T Consensus 359 ~~~~~l 364 (367)
T cd05844 359 RQTAKL 364 (367)
T ss_pred HHHHHH
Confidence 665443
No 11
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=67.25 E-value=36 Score=32.35 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=57.3
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+---|+||-.|+..+..- ..+.+....+=+-+..++ .+++.+++..+.++++..+++++++++++.+..+.
T Consensus 275 ~~~~~~~Ea~~~G~Pvi~s~~~~---~~~~i~~~~~g~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 350 (359)
T cd03808 275 GLPRVLLEAMAMGRPVIATDVPG---CREAVIDGVNGFLVPPGD-AEALADAIERLIEDPELRARMGQAARKRAEEEFDE 350 (359)
T ss_pred CcchHHHHHHHcCCCEEEecCCC---chhhhhcCcceEEECCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 45566777889999888764321 122333334434454432 57899999999999999999999999999898887
Q ss_pred hhHHH
Q 044043 328 KYVYD 332 (428)
Q Consensus 328 ~~~~~ 332 (428)
+.+..
T Consensus 351 ~~~~~ 355 (359)
T cd03808 351 EIVVK 355 (359)
T ss_pred HHHHH
Confidence 76543
No 12
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=66.43 E-value=40 Score=32.61 Aligned_cols=78 Identities=10% Similarity=-0.015 Sum_probs=55.1
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+-.-|+||-.|+..+.... +.+.....-+-+..++ .+++.+++..+.++++..+++++++++++++ ++.
T Consensus 281 ~~~~~~~Ea~a~G~PvI~~~~~~~----~~i~~~~~g~~~~~~d-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~ 354 (366)
T cd03822 281 TQSGVLAYAIGFGKPVISTPVGHA----EEVLDGGTGLLVPPGD-PAALAEAIRRLLADPELAQALRARAREYARA-MSW 354 (366)
T ss_pred ccchHHHHHHHcCCCEEecCCCCh----heeeeCCCcEEEcCCC-HHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCH
Confidence 666677778999998887654332 2233333333343332 5789999999999999999999999999977 776
Q ss_pred hhHH
Q 044043 328 KYVY 331 (428)
Q Consensus 328 ~~~~ 331 (428)
+.+.
T Consensus 355 ~~~~ 358 (366)
T cd03822 355 ERVA 358 (366)
T ss_pred HHHH
Confidence 6544
No 13
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=65.69 E-value=49 Score=33.02 Aligned_cols=85 Identities=12% Similarity=-0.029 Sum_probs=56.9
Q ss_pred cchhhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 249 WSVSEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
++..+---|+||-.|+..+.. ..|. +....+=+-+..++ .+++.+++..+.++++..+.++++|++.+.+.++.
T Consensus 285 ~~~~~lEAma~G~Pvv~s~~~g~~e~----i~~~~~g~~~~~~d-~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 285 ISNTILEAMASGLPVIATAVGGNPEL----VQHGVTGALVPPGD-AVALARALQPYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred CchHHHHHHHcCCCEEEcCCCCcHHH----hcCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 444555678888877775431 2222 22333322243332 57899999999999999999999999999999988
Q ss_pred hhHHHHHHHHH
Q 044043 328 KYVYDYMFHLL 338 (428)
Q Consensus 328 ~~~~~Y~~~LL 338 (428)
+.+..-+..+.
T Consensus 360 ~~~~~~~~~~y 370 (374)
T TIGR03088 360 NAMVAAYAGLY 370 (374)
T ss_pred HHHHHHHHHHH
Confidence 87655444433
No 14
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=64.93 E-value=27 Score=35.68 Aligned_cols=85 Identities=8% Similarity=0.003 Sum_probs=56.3
Q ss_pred hhHHHHhcCCeeeeecCcchhhhhcccCCCce-EEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 252 SEKYILACDSMTLLIEPKYYDFYSRSLVPLQH-YWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 252 rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~H-YVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
-+---|+||-.|+.....- ..+.+..+.+ |+=+...+ .++|.+++..+.++++. ++++++|++.+.+.++.+.+
T Consensus 293 ~~lEAma~G~PVI~s~~gg---~~Eiv~~~~~G~~l~~~~d-~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~ 367 (380)
T PRK15484 293 VAVEAMAAGKPVLASTKGG---ITEFVLEGITGYHLAEPMT-SDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGV 367 (380)
T ss_pred HHHHHHHcCCCEEEeCCCC---cHhhcccCCceEEEeCCCC-HHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHH
Confidence 3445678887776654311 1122333332 21122211 57899999999999875 78999999999999998888
Q ss_pred HHHHHHHHHHH
Q 044043 331 YDYMFHLLIEY 341 (428)
Q Consensus 331 ~~Y~~~LL~eY 341 (428)
..=+.++|..|
T Consensus 368 a~~~~~~l~~~ 378 (380)
T PRK15484 368 TQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHh
Confidence 77777777766
No 15
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=64.93 E-value=38 Score=34.52 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=59.0
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhccc--CCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSL--VPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKL 325 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L--~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L 325 (428)
+....+---|+||-.|+..+... ..+ ....+++- ..+ .+++.++|..+.++++..++|+++|++++.+..
T Consensus 310 G~~~~~lEAma~G~PVV~t~~~~-----~~i~~~~~~g~lv-~~~--~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~f 381 (397)
T TIGR03087 310 GIQNKVLEAMAMAKPVVASPEAA-----EGIDALPGAELLV-AAD--PADFAAAILALLANPAEREELGQAARRRVLQHY 381 (397)
T ss_pred CcccHHHHHHHcCCCEEecCccc-----ccccccCCcceEe-CCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhC
Confidence 34445667799999888764211 122 24456653 344 588999999999999999999999999999888
Q ss_pred ChhhHHHHHHHHH
Q 044043 326 KMKYVYDYMFHLL 338 (428)
Q Consensus 326 ~~~~~~~Y~~~LL 338 (428)
+.+.+..=+..+|
T Consensus 382 sw~~~~~~~~~~l 394 (397)
T TIGR03087 382 HWPRNLARLDALL 394 (397)
T ss_pred CHHHHHHHHHHHh
Confidence 8776655444443
No 16
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=64.74 E-value=30 Score=33.40 Aligned_cols=79 Identities=13% Similarity=0.019 Sum_probs=54.0
Q ss_pred ccchhhHHHHhcCCeeeeecCcc-hhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKY-YDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~-~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+.+..+--.|+||-.|+..+... .+.. .....-.-+..++ .+++.++|..+..++++.++++++|++++.+..+
T Consensus 311 ~~p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s 385 (394)
T cd03794 311 VSPSKLFEYMAAGKPVLASVDGESAELV----EEAGAGLVVPPGD-PEALAAAILELLDDPEERAEMGENGRRYVEEKFS 385 (394)
T ss_pred cCchHHHHHHHCCCcEEEecCCCchhhh----ccCCcceEeCCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhc
Confidence 33445567788898777765432 2222 2222222233322 5789999999999999999999999999998888
Q ss_pred hhhHH
Q 044043 327 MKYVY 331 (428)
Q Consensus 327 ~~~~~ 331 (428)
.+.+.
T Consensus 386 ~~~~~ 390 (394)
T cd03794 386 REKLA 390 (394)
T ss_pred HHHHH
Confidence 77654
No 17
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=64.58 E-value=44 Score=31.89 Aligned_cols=78 Identities=10% Similarity=0.089 Sum_probs=55.0
Q ss_pred ccchhhHHHHhcCCeeeeecCcc-hhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKY-YDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~-~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+++..+.-.|+||-.|+..+... .|+..+ .--++ ..++ .+++.+++..+.+++++.+++++++++++++..+
T Consensus 280 ~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~--~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (365)
T cd03807 280 GFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLV--PPGD-PEALAEAIEALLADPALRQALGEAARERIEENFS 352 (365)
T ss_pred cCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEe--CCCC-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCC
Confidence 45566667788998887765432 333333 11222 2222 5789999999999999999999999999999988
Q ss_pred hhhHHH
Q 044043 327 MKYVYD 332 (428)
Q Consensus 327 ~~~~~~ 332 (428)
.+.+..
T Consensus 353 ~~~~~~ 358 (365)
T cd03807 353 IEAMVE 358 (365)
T ss_pred HHHHHH
Confidence 776543
No 18
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=63.96 E-value=25 Score=36.69 Aligned_cols=82 Identities=13% Similarity=0.048 Sum_probs=55.2
Q ss_pred hhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 252 SEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 252 rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
-.---|+||-.|+..+.. ..|.. ....+=+=+..++ .++|.++|..+.++++.+++++++|++.+.+..+.+.+
T Consensus 356 ~~lEAma~G~PvV~s~~gg~~eiv----~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~ 430 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGPRDII----ANCRNGLLVDVLD-LEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAH 430 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCcHHHh----cCCCcEEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 355668888877765432 23332 2222212132222 47899999999999999999999999999999997776
Q ss_pred HHHHHHHH
Q 044043 331 YDYMFHLL 338 (428)
Q Consensus 331 ~~Y~~~LL 338 (428)
..=+..+|
T Consensus 431 ~~~~~~l~ 438 (439)
T TIGR02472 431 VEKYLRIL 438 (439)
T ss_pred HHHHHHHh
Confidence 55554444
No 19
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=61.91 E-value=49 Score=33.65 Aligned_cols=76 Identities=12% Similarity=-0.055 Sum_probs=53.0
Q ss_pred hhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 251 VSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 251 ~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
..+---|+||-.|+..+..- ..+.+....+=+-+..++ .++|.++|..+.++++..++|+++|++.+.++.+.+.+
T Consensus 315 ~~llEAmA~G~PVIas~~~g---~~e~i~~~~~G~lv~~~d-~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 315 WSLLEAMACGCLVVGSDTAP---VREVITDGENGLLVDFFD-PDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred hHHHHHHHCCCCEEEcCCCC---chhhcccCCceEEcCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34556789999888765431 222333334333333322 57899999999999999999999999999888886643
No 20
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=61.62 E-value=28 Score=33.91 Aligned_cols=79 Identities=10% Similarity=-0.019 Sum_probs=52.8
Q ss_pred ccchhhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+++..+---|+||-.|+..+.. ..+.... ....=.-+..++ .+++.++|..+.+++++.++|+++|++++.++.+
T Consensus 277 ~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~~~~d-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 352 (357)
T cd03795 277 AFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVVPPGD-PAALAEAIRRLLEDPELRERLGEAARERAEEEFT 352 (357)
T ss_pred ccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEeCCCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcc
Confidence 3344455678888888876532 2222221 122222233322 6789999999999999999999999999999888
Q ss_pred hhhH
Q 044043 327 MKYV 330 (428)
Q Consensus 327 ~~~~ 330 (428)
.+.+
T Consensus 353 ~~~~ 356 (357)
T cd03795 353 ADRM 356 (357)
T ss_pred hHhh
Confidence 7653
No 21
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=60.76 E-value=40 Score=29.49 Aligned_cols=70 Identities=9% Similarity=0.050 Sum_probs=49.0
Q ss_pred cccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHH
Q 044043 247 QAWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRY 320 (428)
Q Consensus 247 ~~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~f 320 (428)
-+++..+---|+||.+|+.... ..+.+.+.+..+-+-+...+ -.++.++|.-+.++++..+.|+++|+++
T Consensus 103 e~~~~~~~Ea~~~g~pvI~~~~---~~~~e~~~~~~~g~~~~~~~-~~~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 103 EGFGLSLLEAMACGCPVIASDI---GGNNEIINDGVNGFLFDPND-IEELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp BSS-HHHHHHHHTT-EEEEESS---THHHHHSGTTTSEEEESTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeeccc---cCCceeeccccceEEeCCCC-HHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 3555566778999998887653 33344455555444344332 5789999999999999999999999885
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=58.33 E-value=82 Score=31.42 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=52.0
Q ss_pred HHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCc------ccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 254 KYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKC------RDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 254 k~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~------~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
.--|+||-.|+..+... ..+.+.....-+-+..++ . ++|.++|..+.+++++.++++++|++.+.+.++.
T Consensus 298 lEA~a~G~PvI~s~~~~---~~e~i~~~~~G~~~~~~~-~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 298 LEAMACGTPVVASATGG---IPEVVVDGETGFLVPPDN-SDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHcCCCEEEeCCCC---HHHHhhCCCceEEcCCCC-CcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 45688888777664322 222333443333344332 2 5789999999899999999999999999988887
Q ss_pred hhHHHH
Q 044043 328 KYVYDY 333 (428)
Q Consensus 328 ~~~~~Y 333 (428)
+.+..-
T Consensus 374 ~~~~~~ 379 (388)
T TIGR02149 374 GSIAKK 379 (388)
T ss_pred HHHHHH
Confidence 765443
No 23
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=57.31 E-value=84 Score=30.57 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=53.0
Q ss_pred cchhhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 249 WSVSEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
++..+---|+||-.|+..+.. ..|. +.....=+-+..++ .+++.+++..+.++++..+++++++++++.+..+.
T Consensus 277 ~g~~~~Eam~~g~PvI~~~~~~~~e~----~~~~~~g~~~~~~~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~ 351 (365)
T cd03825 277 FPNTAIEALACGTPVVAFDVGGIPDI----VDHGVTGYLAKPGD-PEDLAEGIEWLLADPDEREELGEAARELAENEFDS 351 (365)
T ss_pred ccHHHHHHHhcCCCEEEecCCCChhh----eeCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 445566778888888765432 2222 22222222333322 57899999999999999999999999999888876
Q ss_pred hhHHH
Q 044043 328 KYVYD 332 (428)
Q Consensus 328 ~~~~~ 332 (428)
+.+..
T Consensus 352 ~~~~~ 356 (365)
T cd03825 352 RVQAK 356 (365)
T ss_pred HHHHH
Confidence 65433
No 24
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=55.46 E-value=79 Score=30.33 Aligned_cols=73 Identities=4% Similarity=-0.076 Sum_probs=53.3
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKL 325 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L 325 (428)
+++..+---|+||-.|+..+.. ...+.+....+-.-+..+. .++.+++..+.++++..+++++++++++.++.
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~---~~~~~i~~~~~g~~~~~~~--~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAP---GLPDLVADGENGFLFPPGD--EALAEALLRLLQDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCC---ChhhheecCceeEEeCCCC--HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 3455566778999988876543 2334455555555565553 28999999999999999999999999987665
No 25
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=55.08 E-value=64 Score=31.32 Aligned_cols=127 Identities=15% Similarity=0.198 Sum_probs=75.2
Q ss_pred CCCceecCCCCcccccccCccchHHHHHHHHcccCCCCcccccCcEEEeeCCCCc------hhHHHHHHhhccCCCcccc
Q 044043 139 ESLDIVFPDWSFWGWAETNIRPWNSILEDIKEGNKRTKWINRAPYAYWKGNPYVS------IAREDLMKCNVTDKYQWKT 212 (428)
Q Consensus 139 ~~~DIl~Pd~~fw~wpe~~i~~w~~~~~~i~~~~~~~pW~~K~p~afWRG~~t~~------~~R~~Lv~~~~s~~~~~~a 212 (428)
...||++|.+.... ....+. .....+..+|.-.++++|+.... ..|..|+..-...+ ++.
T Consensus 151 ~~~Di~~P~~~~~~----~~~~~~--------~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~-~~~- 216 (302)
T PF03016_consen 151 PGFDIVIPPFVPPS----SLPDWR--------PWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDP-DFR- 216 (302)
T ss_pred CCCCeecccccccc----ccCCcc--------ccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCC-cce-
Confidence 45789999875421 111111 00244677888999999997643 46777776421111 111
Q ss_pred ceeecccchhhccCCcccchhhhccceEEEeecCcc-cchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEE
Q 044043 213 RLYVQDWHKEKKQGFEKSKLADQCTHRYKIYVEGQA-WSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYW 285 (428)
Q Consensus 213 ~v~~~~w~~~~~~g~~~~~l~~~~~yKYli~idG~~-~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYV 285 (428)
+...... ..+ ..--++...+-||-+..-|.+ +|.|+-=-|++|++.+.....+.-=|.+.| +|.-|.
T Consensus 217 -~~~~~~~---~~~-~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw~~fs 284 (302)
T PF03016_consen 217 -CSDGSET---CPS-PSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DWSRFS 284 (302)
T ss_pred -eeecccc---ccc-chHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc-CHHHEE
Confidence 1110000 000 111335567889999999996 899999999999976666555555555555 666664
No 26
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=54.34 E-value=54 Score=32.00 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=54.3
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+--.|+||-+|+..+... ..+.+.....+++ .+ +.+.++|+.+.++++..++++++|++.+.+.++.
T Consensus 280 ~~~~~~~EAma~G~PvI~s~~~~---~~e~~~~~g~~~~--~~---~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 280 GTNPSLLEAMAYGCPVLASDNPF---NREVLGDKAIYFK--VG---DDLASLLEELEADPEEVSAMAKAARERIREKYTW 351 (363)
T ss_pred CCChHHHHHHHcCCCEEEecCCc---cceeecCCeeEec--Cc---hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 34455667788999888765431 1222222333432 22 2299999999999999999999999999888887
Q ss_pred hhHHHHHH
Q 044043 328 KYVYDYMF 335 (428)
Q Consensus 328 ~~~~~Y~~ 335 (428)
+.+..=+.
T Consensus 352 ~~~~~~~~ 359 (363)
T cd04955 352 EKIADQYE 359 (363)
T ss_pred HHHHHHHH
Confidence 76554433
No 27
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=53.58 E-value=26 Score=36.19 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=45.2
Q ss_pred hHHHHhcCCeeeeecC--cchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Q 044043 253 EKYILACDSMTLLIEP--KYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEK 324 (428)
Q Consensus 253 lk~lL~~~Svvl~~~s--~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~ 324 (428)
.---|+||..|+.... .+.|-. +.+...---+++.+ .++|.+++..+.++++.+++++++|++++.++
T Consensus 337 ~lEAma~G~PVI~g~~~~~~~e~~-~~~~~~g~~~~~~d---~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 337 PLEPAAFGVPVISGPHTFNFKEIF-ERLLQAGAAIQVED---AEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHHHHHhCCCEEECCCccCHHHHH-HHHHHCCCeEEECC---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence 4456888888876321 122322 22222222334332 47899999999999999999999999999776
No 28
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=53.49 E-value=62 Score=31.40 Aligned_cols=79 Identities=13% Similarity=0.033 Sum_probs=54.8
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+.--|+||-.|+..+.. ...+.+.....=+-+..++ .+++.++|..+.++++..++++++|++++.+..+.
T Consensus 273 ~~~~~~~Ea~a~G~Pvi~~~~~---~~~~~i~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 273 GLPVVLMEAMAMGLPVISTDVS---GIPELVEDGETGLLVPPGD-PEALADAIERLLDDPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred CccHHHHHHHHcCCCEEecCCC---CcchhhhCCCceEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 3455566678888888765432 2223344442323344422 68899999999999999999999999999988877
Q ss_pred hhH
Q 044043 328 KYV 330 (428)
Q Consensus 328 ~~~ 330 (428)
+.+
T Consensus 349 ~~~ 351 (355)
T cd03799 349 RKQ 351 (355)
T ss_pred HHH
Confidence 654
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=49.70 E-value=1.4e+02 Score=29.90 Aligned_cols=82 Identities=9% Similarity=-0.011 Sum_probs=54.5
Q ss_pred chhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhh
Q 044043 250 SVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKY 329 (428)
Q Consensus 250 S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~ 329 (428)
...+---|+||-.|+..+..- ..+.+..+..-+-+.. .+++..++..+..+++..++++++|++.+.+.++.+.
T Consensus 287 g~~~lEA~a~G~Pvv~s~~~~---~~~~i~~~~~g~~~~~---~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 360 (372)
T cd03792 287 GLTVTEALWKGKPVIAGPVGG---IPLQIEDGETGFLVDT---VEEAAVRILYLLRDPELRRKMGANAREHVRENFLITR 360 (372)
T ss_pred CHHHHHHHHcCCCEEEcCCCC---chhhcccCCceEEeCC---cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 334556688888776654321 1223444555554543 2577888988888999999999999999988888776
Q ss_pred HHHHHHHH
Q 044043 330 VYDYMFHL 337 (428)
Q Consensus 330 ~~~Y~~~L 337 (428)
+..=|..+
T Consensus 361 ~~~~~~~~ 368 (372)
T cd03792 361 HLKDYLYL 368 (372)
T ss_pred HHHHHHHH
Confidence 55433333
No 30
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=45.31 E-value=1.2e+02 Score=28.86 Aligned_cols=77 Identities=12% Similarity=0.209 Sum_probs=53.5
Q ss_pred ccchhhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+++..+---|+||-.|+..+.. ..+...+ ...++ +..+ -+++.+++..+.++++..+.+++++.+++.+.++
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~----~~~~~-~~~~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY----GCGWV-VDDD--VDALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc----CceEE-eCCC--hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 3445566678899888776532 2333222 23333 2233 2789999999999999999999999999988888
Q ss_pred hhhHH
Q 044043 327 MKYVY 331 (428)
Q Consensus 327 ~~~~~ 331 (428)
.+.+.
T Consensus 366 ~~~~~ 370 (375)
T cd03821 366 WTAIA 370 (375)
T ss_pred HHHHH
Confidence 77543
No 31
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=42.99 E-value=73 Score=31.81 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=55.7
Q ss_pred cCcccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Q 044043 245 EGQAWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEK 324 (428)
Q Consensus 245 dG~~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~ 324 (428)
||.+.+ .---|+||-.|+..+... ..+.+..+..-+=+..+ -+++.+++..+.++++..++++++|++++++.
T Consensus 310 E~~g~~--~lEAma~G~PvI~s~~~~---~~e~i~~~~~g~~~~~~--~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 310 EHFGIV--PLEAMYAGKPVIACNSGG---PLETVVDGETGFLCEPT--PEEFAEAMLKLANDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CCCCch--HHHHHHcCCCEEEECCCC---cHHHhccCCceEEeCCC--HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHh
Confidence 444333 345788999888765432 22334444444334444 47899999999999999999999999999988
Q ss_pred hChhhHH
Q 044043 325 LKMKYVY 331 (428)
Q Consensus 325 L~~~~~~ 331 (428)
.+.+.+.
T Consensus 383 ~s~~~~~ 389 (392)
T cd03805 383 FSTEAFA 389 (392)
T ss_pred cCHHHHh
Confidence 8877653
No 32
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=40.37 E-value=1.4e+02 Score=28.60 Aligned_cols=73 Identities=7% Similarity=-0.096 Sum_probs=48.1
Q ss_pred cccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHH
Q 044043 247 QAWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQE 323 (428)
Q Consensus 247 ~~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~ 323 (428)
-+++..+--.|+||-.|+..+... ..+.+.....=+-+..++ .+++.+++..+.++++..+.+++++++....
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGG---MAELVRDGVNGLLFPPGD-AEDLAAALERLIDDPDLLERLRAGIEPPRSI 346 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCC---HHHHhcCCCcEEEECCCC-HHHHHHHHHHHHhChHHHHHHHHhHHHhhhH
Confidence 345556667789999888765432 222233322222233332 4789999999999999999999999887654
No 33
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=39.86 E-value=1.4e+02 Score=28.31 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=56.5
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+--.|+||..|+..+... ..+.+.....=+-+..++ .+++.+++..+.+++.. ++++++++.+.+.++.
T Consensus 290 ~~~~~~~Ea~~~G~pvI~~~~~~---~~~~~~~~~~g~~~~~~~-~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~ 363 (377)
T cd03798 290 GFGLVLLEAMACGLPVVATDVGG---IPEIITDGENGLLVPPGD-PEALAEAILRLLADPWL--RLGRAARRRVAERFSW 363 (377)
T ss_pred cCChHHHHHHhcCCCEEEecCCC---hHHHhcCCcceeEECCCC-HHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhH
Confidence 45666777889999888765322 222334444312234332 57889999999988877 7888999999888887
Q ss_pred hhHHHHHHHHH
Q 044043 328 KYVYDYMFHLL 338 (428)
Q Consensus 328 ~~~~~Y~~~LL 338 (428)
+.+..-+..++
T Consensus 364 ~~~~~~~~~~~ 374 (377)
T cd03798 364 ENVAERLLELY 374 (377)
T ss_pred HHHHHHHHHHH
Confidence 76555444444
No 34
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=38.39 E-value=1.5e+02 Score=30.46 Aligned_cols=80 Identities=5% Similarity=-0.080 Sum_probs=54.7
Q ss_pred cchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChh
Q 044043 249 WSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMK 328 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~ 328 (428)
.+..+---|+||-.|+..+..- ..+.+....+=+-+..+..-+++.++|..+.++++..++|+++|++++.+..+.+
T Consensus 323 ~p~~llEAma~G~PVIas~vgg---~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 323 LPVSIMEAMSFGIPVIATNVGG---TPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred ccHHHHHHHHcCCCEEeCCCCC---cHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 4555667899999888754321 1223333422222222211478999999999999999999999999999999877
Q ss_pred hHH
Q 044043 329 YVY 331 (428)
Q Consensus 329 ~~~ 331 (428)
..+
T Consensus 400 ~~~ 402 (407)
T cd04946 400 KNY 402 (407)
T ss_pred HhH
Confidence 654
No 35
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=38.02 E-value=2.5e+02 Score=28.24 Aligned_cols=81 Identities=11% Similarity=-0.022 Sum_probs=53.5
Q ss_pred cchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChh
Q 044043 249 WSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMK 328 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~ 328 (428)
++..+---|+||-.|+..+... ..+.+.....-+-+..++ .+++.++|..+.++++..++++++|++++ +.++.+
T Consensus 315 ~g~~~lEAma~G~Pvi~~~~~~---~~e~i~~~~~g~~~~~~d-~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~ 389 (405)
T TIGR03449 315 FGLVAMEAQACGTPVVAARVGG---LPVAVADGETGLLVDGHD-PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWA 389 (405)
T ss_pred cChHHHHHHHcCCCEEEecCCC---cHhhhccCCceEECCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHH
Confidence 3445666788888777655321 122333444445555432 57899999999899999999999999987 457766
Q ss_pred hHHHHH
Q 044043 329 YVYDYM 334 (428)
Q Consensus 329 ~~~~Y~ 334 (428)
.+..=+
T Consensus 390 ~~~~~~ 395 (405)
T TIGR03449 390 ATADGL 395 (405)
T ss_pred HHHHHH
Confidence 654433
No 36
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=34.60 E-value=2e+02 Score=27.58 Aligned_cols=78 Identities=6% Similarity=-0.069 Sum_probs=52.3
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+++..+--.|+||-+|+..+... ..+.+.....-+-+..++ -+++.+++..+..|++..+++++++.+++ +..+.
T Consensus 278 ~~~~~~lEa~a~g~PvI~~~~~~---~~~~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~ 352 (364)
T cd03814 278 TFGLVVLEAMASGLPVVAPDAGG---PADIVTDGENGLLVEPGD-AEAFAAALAALLADPELRRRMAARARAEA-ERRSW 352 (364)
T ss_pred cCCcHHHHHHHcCCCEEEcCCCC---chhhhcCCcceEEcCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCH
Confidence 34555667799999888765432 223333333333333332 45688999999999999999999999988 55665
Q ss_pred hhH
Q 044043 328 KYV 330 (428)
Q Consensus 328 ~~~ 330 (428)
+.+
T Consensus 353 ~~~ 355 (364)
T cd03814 353 EAF 355 (364)
T ss_pred HHH
Confidence 544
No 37
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=33.17 E-value=2.7e+02 Score=29.36 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=52.0
Q ss_pred cchhhHHHHhcCCeeeeecCc-chhhhhcccCC---CceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Q 044043 249 WSVSEKYILACDSMTLLIEPK-YYDFYSRSLVP---LQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEK 324 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P---~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~ 324 (428)
++..+---|+||-.|+..+.. ..|...+. .. +..=+=+...+ .++|.++|..+.++++..++++++|++.+.++
T Consensus 383 ~p~~vlEAma~G~PVVatd~g~~~elv~~~-~~~~~g~~G~lv~~~d-~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~ 460 (475)
T cd03813 383 QPLVILEAMAAGIPVVATDVGSCRELIEGA-DDEALGPAGEVVPPAD-PEALARAILRLLKDPELRRAMGEAGRKRVERY 460 (475)
T ss_pred CChHHHHHHHcCCCEEECCCCChHHHhcCC-cccccCCceEEECCCC-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 344455668888877765432 23333221 00 11111122221 57899999999999999999999999999988
Q ss_pred hChhhHH
Q 044043 325 LKMKYVY 331 (428)
Q Consensus 325 L~~~~~~ 331 (428)
.+.+.+.
T Consensus 461 ~s~~~~~ 467 (475)
T cd03813 461 YTLERMI 467 (475)
T ss_pred CCHHHHH
Confidence 8865443
No 38
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=32.66 E-value=2e+02 Score=28.34 Aligned_cols=77 Identities=16% Similarity=0.028 Sum_probs=51.1
Q ss_pred hhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChhhHH
Q 044043 252 SEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMKYVY 331 (428)
Q Consensus 252 rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~~~~ 331 (428)
.+-=-|+||-.|+..+.. ...+.+.....=+-+..++ .+++.++|..+.++++..+++++++++++.+..+.+.+.
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~---~~~e~i~~~~~g~~~~~~~-~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVG---GPRDIVVDGVTGLLVDPRD-PEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCC---CHHHHccCCCCeEEeCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 345567788777665432 1222233333222233322 578999999999999999999999999998888877654
Q ss_pred H
Q 044043 332 D 332 (428)
Q Consensus 332 ~ 332 (428)
.
T Consensus 394 ~ 394 (398)
T cd03800 394 A 394 (398)
T ss_pred H
Confidence 4
No 39
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=32.10 E-value=1.2e+02 Score=31.45 Aligned_cols=75 Identities=4% Similarity=-0.017 Sum_probs=51.8
Q ss_pred CcccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhcc---HHHHHHHHHHHHHHHH
Q 044043 246 GQAWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTH---TRQARAIGRAGSRYMQ 322 (428)
Q Consensus 246 G~~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h---~~~A~~IA~~g~~fa~ 322 (428)
|.+.+..+--.|+||-.|+..... -..+.+.....=+-+. | .++|.++|..+.++ +++.++++++|+++.+
T Consensus 327 ~~~~p~~~~Eama~G~PVI~s~~~---~~~eiv~~~~~G~lv~-d--~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 327 GLDLPMKVVDMFGCGLPVCALDFK---CIDELVKHGENGLVFG-D--SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred ccCCcHHHHHHHHcCCCEEEeCCC---CHHHHhcCCCCEEEEC-C--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 444565666779999988875432 1223333443333343 4 68999999999888 9999999999999986
Q ss_pred HHhC
Q 044043 323 EKLK 326 (428)
Q Consensus 323 ~~L~ 326 (428)
+...
T Consensus 401 ~~~~ 404 (415)
T cd03816 401 LRWD 404 (415)
T ss_pred cCHH
Confidence 5544
No 40
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=31.17 E-value=1.6e+02 Score=28.66 Aligned_cols=76 Identities=5% Similarity=-0.060 Sum_probs=50.0
Q ss_pred ccchhhHHHHhcCCeeeeecC-cchhhhhcccCCCceEEEecCCCCcccHHHHHH-hhhccHHHHHHHHHHHHHHHHHHh
Q 044043 248 AWSVSEKYILACDSMTLLIEP-KYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVE-WGNTHTRQARAIGRAGSRYMQEKL 325 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s-~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~-w~~~h~~~A~~IA~~g~~fa~~~L 325 (428)
+++..+--.|+||-.|+..+. ...|...+.. ..++ +..++ .+++.++|. .+..++++.++++++|++++.++.
T Consensus 276 ~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~---~g~~-~~~~~-~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f 350 (355)
T cd03819 276 AFGRTAVEAQAMGRPVIASDHGGARETVRPGE---TGLL-VPPGD-AEALAQALDQILSLLPEGRAKMFAKARMCVETLF 350 (355)
T ss_pred CCchHHHHHHhcCCCEEEcCCCCcHHHHhCCC---ceEE-eCCCC-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhh
Confidence 444556677888887776543 2333332221 2233 33322 578889994 667789999999999999998887
Q ss_pred Chh
Q 044043 326 KMK 328 (428)
Q Consensus 326 ~~~ 328 (428)
+.+
T Consensus 351 ~~~ 353 (355)
T cd03819 351 SYD 353 (355)
T ss_pred hhc
Confidence 654
No 41
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=28.07 E-value=1.6e+02 Score=28.25 Aligned_cols=75 Identities=8% Similarity=0.047 Sum_probs=49.6
Q ss_pred cchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChh
Q 044043 249 WSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMK 328 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~ 328 (428)
++..+--.|++|-+|+..+.. .+-+.+.....+++.. + .+++.+++..+.++++..++++++|++++ +..+.+
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~---~~~e~~~~~~~~~~~~-~--~~~~~~~i~~l~~~~~~~~~~~~~~~~~~-~~~sw~ 357 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNIS---SLPEVAGDAALYFDPL-D--PEALAAAIERLLEDPALREELRERGLARA-KRFSWE 357 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCC---CccceecCceeeeCCC-C--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhCCHH
Confidence 344566678888888775542 1222223333344333 2 57899999999999999999999999776 456655
Q ss_pred hH
Q 044043 329 YV 330 (428)
Q Consensus 329 ~~ 330 (428)
.+
T Consensus 358 ~~ 359 (365)
T cd03809 358 KT 359 (365)
T ss_pred HH
Confidence 43
No 42
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=27.93 E-value=3.3e+02 Score=28.44 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=29.4
Q ss_pred cccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhChh
Q 044043 293 CRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKMK 328 (428)
Q Consensus 293 ~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~~ 328 (428)
-+++.++|..+.++++..++++++|++.+. .++-+
T Consensus 387 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-~fsw~ 421 (465)
T PLN02871 387 VDDCVEKLETLLADPELRERMGAAAREEVE-KWDWR 421 (465)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-hCCHH
Confidence 578999999999999999999999999885 44433
No 43
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=25.62 E-value=3.6e+02 Score=25.21 Aligned_cols=79 Identities=6% Similarity=-0.037 Sum_probs=50.9
Q ss_pred ccchhhHHHHhcCCeeeeecCcc-hhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKY-YDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~-~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+++..+--.|+||-.|+..+... .+. .+....+=+-++..+ .+++.+++..+.++++..+++++++++++ +.++
T Consensus 264 ~~~~~~~Ea~a~G~Pvi~~~~~~~~~~---~~~~~~~g~~~~~~~-~~~~~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFGLPVISFDCPTGPSE---IIEDGVNGLLVPNGD-VEALAEALLRLMEDEELRKRMGANARESA-ERFS 338 (348)
T ss_pred ccCHHHHHHHHcCCCEEEecCCCchHh---hhccCcceEEeCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhC
Confidence 44556677889999888754321 121 112222222233322 57899999999999999999999997766 5566
Q ss_pred hhhHH
Q 044043 327 MKYVY 331 (428)
Q Consensus 327 ~~~~~ 331 (428)
.+.+.
T Consensus 339 ~~~~~ 343 (348)
T cd03820 339 IENII 343 (348)
T ss_pred HHHHH
Confidence 66543
No 44
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=25.54 E-value=3.9e+02 Score=25.77 Aligned_cols=84 Identities=8% Similarity=0.093 Sum_probs=51.0
Q ss_pred ccchhhHHHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhC
Q 044043 248 AWSVSEKYILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGN-THTRQARAIGRAGSRYMQEKLK 326 (428)
Q Consensus 248 ~~S~rlk~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~-~h~~~A~~IA~~g~~fa~~~L~ 326 (428)
+++..+---|+||-+|+..+... ..+.+.+.--.++. .+ .+++.+++..+. ..++..+.++++ ++.+.+.++
T Consensus 274 ~~~~~~~Ea~a~G~PvI~~~~~~---~~e~i~~~g~~~~~-~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s 346 (360)
T cd04951 274 GFGLVVAEAMACELPVVATDAGG---VREVVGDSGLIVPI-SD--PEALANKIDEILKMSGEERDIIGAR-RERIVKKFS 346 (360)
T ss_pred CCChHHHHHHHcCCCEEEecCCC---hhhEecCCceEeCC-CC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcC
Confidence 34455666788888777654322 22223333333332 22 478899998876 455666666666 888888888
Q ss_pred hhhHHHHHHHHH
Q 044043 327 MKYVYDYMFHLL 338 (428)
Q Consensus 327 ~~~~~~Y~~~LL 338 (428)
.+.+..-+..++
T Consensus 347 ~~~~~~~~~~~y 358 (360)
T cd04951 347 INSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHHHHh
Confidence 877666555443
No 45
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=25.22 E-value=3.6e+02 Score=27.28 Aligned_cols=87 Identities=10% Similarity=0.036 Sum_probs=56.7
Q ss_pred cchhhHHHHhcCCeeeeecCc-chhhhhcccCCCceEEEecCCCCcccHHHHHHhhhccHHHHHHHHHHHHHHHHHHhCh
Q 044043 249 WSVSEKYILACDSMTLLIEPK-YYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWGNTHTRQARAIGRAGSRYMQEKLKM 327 (428)
Q Consensus 249 ~S~rlk~lL~~~Svvl~~~s~-~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~~~h~~~A~~IA~~g~~fa~~~L~~ 327 (428)
+...+.--|+||-.|+..+.. ..| .+......+ +..+ -.++.+++..+.+++.+.+.+.+++.+++.+..+.
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e----~i~~~~~~~-~~~~--~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~ 354 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPE----VLPPDMILL-AEPD--VESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSW 354 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchh----heeCCceee-cCCC--HHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCH
Confidence 334566789999988776432 222 222232333 2223 47899999998888887878889999999998887
Q ss_pred hhHHHHHHHHHHHHHhhc
Q 044043 328 KYVYDYMFHLLIEYAKLL 345 (428)
Q Consensus 328 ~~~~~Y~~~LL~eYa~L~ 345 (428)
+.+..- ++.-|.+++
T Consensus 355 ~~~~~~---~~~~y~~l~ 369 (398)
T cd03796 355 EDVAKR---TEKVYDRIL 369 (398)
T ss_pred HHHHHH---HHHHHHHHh
Confidence 765543 334444544
No 46
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=23.63 E-value=3.3e+02 Score=31.29 Aligned_cols=80 Identities=10% Similarity=-0.004 Sum_probs=47.8
Q ss_pred HHHhcCCeeeeecCcchhhhhcccCCCceEEEecCCCCcccHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhChhhH
Q 044043 255 YILACDSMTLLIEPKYYDFYSRSLVPLQHYWPVRTARKCRDIKFAVEWG----NTHTRQARAIGRAGSRYMQEKLKMKYV 330 (428)
Q Consensus 255 ~lL~~~Svvl~~~s~~~e~f~~~L~P~~HYVPv~~~~~~~dL~~~v~w~----~~h~~~A~~IA~~g~~fa~~~L~~~~~ 330 (428)
--|+||-.|+..+..= .-+.+..+++=.-|+..+ .+++.+++..+ .++++..++|+++|.+.+.+..+-+.+
T Consensus 662 EAMAcGlPVVAT~~GG---~~EiV~dg~tGfLVdp~D-~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 662 EAMTCGLPTFATRFGG---PLEIIQDGVSGFHIDPYH-GEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHcCCCEEEcCCCC---HHHHhcCCCcEEEeCCCC-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 4466666666543211 111233344333344432 46788887754 378999999999999988887776655
Q ss_pred HHHHHHHH
Q 044043 331 YDYMFHLL 338 (428)
Q Consensus 331 ~~Y~~~LL 338 (428)
..-+..++
T Consensus 738 A~~ll~l~ 745 (784)
T TIGR02470 738 SERLLTLA 745 (784)
T ss_pred HHHHHHHH
Confidence 44444444
Done!